BLASTX nr result
ID: Stemona21_contig00013782
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00013782
(1584 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 543 e-152
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 539 e-150
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 526 e-146
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 525 e-146
ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [S... 522 e-145
ref|XP_006654023.1| PREDICTED: DNA-directed RNA polymerases I an... 519 e-144
ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group] g... 517 e-144
ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I an... 516 e-144
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 516 e-143
ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I an... 515 e-143
ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea ma... 515 e-143
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 513 e-143
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 512 e-142
ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I an... 509 e-141
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 495 e-137
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 494 e-137
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 491 e-136
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 491 e-136
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 490 e-136
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 490 e-136
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 543 bits (1400), Expect = e-152
Identities = 263/371 (70%), Positives = 317/371 (85%), Gaps = 4/371 (1%)
Frame = +2
Query: 233 RPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFC 412
R ALDMPDVP G+LP H+ QRTRV+CN DAP HT+ VQYS AY+SMGVDNS D+FC
Sbjct: 3 RSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFC 62
Query: 413 SDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQL 592
++F+V+VIRL+ED+MEFDM+GID S+ANAFRRILIAE+PTMAIEKVL+ NNTS++ DE L
Sbjct: 63 NNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVL 122
Query: 593 AHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGS 772
AHRLGLIP++ADPRLF+ LSEND PNE+NTIVF L+V C+RGGPRLTVKS++LKWLP GS
Sbjct: 123 AHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGS 182
Query: 773 ELQMALPN----PSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEA 940
E +A N ++KPK+YT+FS SQDS+PEF+ K +G KH DIII++LGPGQ IELEA
Sbjct: 183 EFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEA 242
Query: 941 HAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEK 1120
HAVKG+GK HAKWSPV +AWYRMLPEVVLL+E++ + AE+LVKKCPV VFDIED+ +G+K
Sbjct: 243 HAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKK 302
Query: 1121 KAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILE 1300
KA V PRACTLCRECIRG + + V +RRVK+HFIFTIES GALPPEVLF EAVK+LE
Sbjct: 303 KATVARPRACTLCRECIRG-DDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLE 361
Query: 1301 EKCDRVISELS 1333
+KC+RVI+ELS
Sbjct: 362 DKCERVITELS 372
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 539 bits (1388), Expect = e-150
Identities = 266/384 (69%), Positives = 316/384 (82%), Gaps = 5/384 (1%)
Frame = +2
Query: 197 MAGK-EKNGGSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYAS 373
MAG+ E+ G ++ S D+PDVP G+LP HL QRTRV+CN DAPIHT+ V YS AYAS
Sbjct: 1 MAGQGEERGEEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYAS 60
Query: 374 MGVDNSSTPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVL 553
MGVDNS D FC +F+V+V+RL E++MEFDM+GIDA++ANAFRRILIAE+PTMAIEKVL
Sbjct: 61 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 120
Query: 554 VVNNTSVIADEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLT 733
+ NNTSV+ DE LAHRLGLIP+ DPRLFEY+SEND PNE+NTIVFKL+V CKRG PR+T
Sbjct: 121 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 180
Query: 734 VKSDQLKWLPGGSEL----QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIII 901
VKSD+LKWLP GSEL + + ++KP++YT+FS SQD++PEF P+ K+ DIII
Sbjct: 181 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 240
Query: 902 SRLGPGQAIELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPV 1081
S+LGPGQ IELEAHAVKG+GK HAKWSPV +AWYRMLPEVVLL EV+ D AE L KCPV
Sbjct: 241 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 300
Query: 1082 KVFDIEDVGRGEKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALP 1261
VFDIED+G+G+K+A V PRACTLCRECIR E E +V + RVKDHFIFTIES GALP
Sbjct: 301 NVFDIEDLGKGKKRATVARPRACTLCRECIRD-EEWEKRVAIHRVKDHFIFTIESTGALP 359
Query: 1262 PEVLFTEAVKILEEKCDRVISELS 1333
PEVLFTEAVKILE+KC+RVI+ELS
Sbjct: 360 PEVLFTEAVKILEDKCERVITELS 383
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 526 bits (1355), Expect = e-146
Identities = 264/379 (69%), Positives = 311/379 (82%), Gaps = 3/379 (0%)
Frame = +2
Query: 206 KEKNGGSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVD 385
K+K G S S D+PDVP KLP H+ QRTRV CN DAPIHT+ V YS AYASMGVD
Sbjct: 9 KKKEGESF---SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVD 64
Query: 386 NSSTPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNN 565
NS D FC++F+V+VIRL +D+MEFD++GIDA++ANAFRRILIAE+PTMAIEKVL+ NN
Sbjct: 65 NSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANN 124
Query: 566 TSVIADEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSD 745
TSVI DE LAHRLGLIP+ DPRLFEY+SEND NE+NTIVFKL+VLC+RGGPRLTVK++
Sbjct: 125 TSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTN 184
Query: 746 QLKWLPGGSELQMAL---PNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGP 916
+LKWLP GSEL + NP +KP++YT+FS SQDS+PEF+ P+ DI I+RLGP
Sbjct: 185 ELKWLPNGSELPLETKPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIR-PMLDITIARLGP 243
Query: 917 GQAIELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDI 1096
GQ IELEAHAVKGIGK HAKWSPV +AWYRMLPE+VLL +V+ +DAEKLVK CPV VFDI
Sbjct: 244 GQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDI 303
Query: 1097 EDVGRGEKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLF 1276
ED+G G+K+A V PRACTLCREC+R E E +V +RRVKDHFIFTIES GAL PE LF
Sbjct: 304 EDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLF 363
Query: 1277 TEAVKILEEKCDRVISELS 1333
TEAVKILE+KC+RVI+ELS
Sbjct: 364 TEAVKILEDKCERVITELS 382
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 525 bits (1352), Expect = e-146
Identities = 260/368 (70%), Positives = 306/368 (83%), Gaps = 3/368 (0%)
Frame = +2
Query: 239 SALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSD 418
S D+PDVP KLP H+ QRTRV CN DAPIHT+ V YS AYASMGVDNS D FC++
Sbjct: 56 SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 114
Query: 419 FKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAH 598
F+V+VIRL +D+MEFD++GIDA++ANAFRRILIAE+PTMAIEKVL+ NNTSVI DE LAH
Sbjct: 115 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 174
Query: 599 RLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSEL 778
RLGLIP+ DPRLFEY+SEND NE+NTIVFKL+VLC+RGGPRLTVK+++LKWLP GSEL
Sbjct: 175 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSEL 234
Query: 779 QMAL---PNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAV 949
+ NPS+KP++YT+FS SQD +PEF+ P+ DI I+RLGPGQ IELEAHAV
Sbjct: 235 PLETKPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIR-PMLDITIARLGPGQEIELEAHAV 293
Query: 950 KGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAV 1129
KGIGK HAKWSPV +AWYRMLPE+VLL +V+ +DAEKLVK CPV VFDIED+G G+K+A
Sbjct: 294 KGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRAT 353
Query: 1130 VTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKC 1309
V PRACTLCREC+R E E +V +RRVKDHFIFTIES GAL PE LFTEAVKILE+KC
Sbjct: 354 VARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDKC 413
Query: 1310 DRVISELS 1333
+RVI+ELS
Sbjct: 414 ERVITELS 421
>ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [Sorghum bicolor]
gi|241933300|gb|EES06445.1| hypothetical protein
SORBIDRAFT_04g006420 [Sorghum bicolor]
Length = 370
Score = 522 bits (1345), Expect = e-145
Identities = 257/361 (71%), Positives = 307/361 (85%), Gaps = 1/361 (0%)
Frame = +2
Query: 254 PDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSDFKVQV 433
P+ KLPD+L QRTRVVCNADAPIHT QYS +A+MGVDNS + ++FC +FK+++
Sbjct: 15 PNQQENKLPDYLEVQRTRVVCNADAPIHTQGYQYSGTFAAMGVDNSVSVEKFCKNFKIEI 74
Query: 434 IRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAHRLGLI 613
RL ED+MEFDM+GIDAS+ANAFRRILIAEVPTMAIEK+ +V+NTSVIADE L+HRLGLI
Sbjct: 75 NRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADEVLSHRLGLI 134
Query: 614 PLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSELQMALP 793
PL ADPRLF+Y+SEND PNERNT+V+KL+V C +G R+TVKS +L+WLP GS+L MA P
Sbjct: 135 PLRADPRLFDYISENDVPNERNTVVYKLHVSCPKGSQRITVKSSELEWLPEGSQLSMAAP 194
Query: 794 NPSA-KPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKGIGKVH 970
S K K++T+FS+SQ E ++PLGVK +DI I+RLGPGQAIELEAHAVKG+GKVH
Sbjct: 195 AQSGDKQKTFTSFSQSQ---KEILEEPLGVKFKDITIARLGPGQAIELEAHAVKGVGKVH 251
Query: 971 AKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVTNPRAC 1150
AKWSPV +AWYRMLPEVV+L++++GDDAE+LVKKCPV VFDIED+G G K+AVV PRAC
Sbjct: 252 AKWSPVATAWYRMLPEVVILKDIEGDDAEELVKKCPVNVFDIEDLGNGGKRAVVAKPRAC 311
Query: 1151 TLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDRVISEL 1330
TLCREC+ G + QVELRRV+DHFIFTIES GALPPEVLFTEAVKILEEKC+RVISEL
Sbjct: 312 TLCRECVMGPNGN--QVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCERVISEL 369
Query: 1331 S 1333
S
Sbjct: 370 S 370
>ref|XP_006654023.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
[Oryza brachyantha]
Length = 374
Score = 519 bits (1336), Expect = e-144
Identities = 259/355 (72%), Positives = 300/355 (84%), Gaps = 1/355 (0%)
Frame = +2
Query: 272 KLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSDFKVQVIRLAED 451
KLP+HL QRTRVVC D P++T+ QY A+++MG+DNS + D+FC DFKV++ RL ED
Sbjct: 25 KLPEHLELQRTRVVCKFDGPVNTEGFQYGGAFSAMGIDNSVSVDKFCKDFKVEIKRLTED 84
Query: 452 EMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAHRLGLIPLDADP 631
++EFDM+GIDAS+ANAFRRILIAEVPTMAIEKVL+ +N+SVIADE LAHRLGLIPLDADP
Sbjct: 85 DVEFDMIGIDASVANAFRRILIAEVPTMAIEKVLIADNSSVIADEVLAHRLGLIPLDADP 144
Query: 632 RLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSELQMALPNPSA-K 808
RLFEY+SENDAPNERNTIV+KL+V CK+G PRLTVKS L+WLP GS+L +A P S K
Sbjct: 145 RLFEYISENDAPNERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQLPLASPAQSRDK 204
Query: 809 PKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKGIGKVHAKWSPV 988
K+YT+FS+SQ + E KPLGVK +DI I+RLGPGQAIELE HAVKGIGKVHAKWSPV
Sbjct: 205 KKTYTSFSQSQKDILE---KPLGVKLKDITIARLGPGQAIELEVHAVKGIGKVHAKWSPV 261
Query: 989 CSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVTNPRACTLCREC 1168
+AWYRMLPEVVL E KGDDAE+LVKKCPV VFDIED+G GEK+A V PRACTLCR+C
Sbjct: 262 ATAWYRMLPEVVLSEEFKGDDAEELVKKCPVNVFDIEDLGNGEKRAFVAKPRACTLCRQC 321
Query: 1169 IRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDRVISELS 1333
+ G S E V LRRV+DHFIFTIES GALPPE LFTEAV+ILEEKC+RVISELS
Sbjct: 322 VTGPSGE--HVHLRRVRDHFIFTIESTGALPPETLFTEAVRILEEKCERVISELS 374
>ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group]
gi|108707636|gb|ABF95431.1| RNA polymerase Rpb3/Rpb11
dimerisation domain containing protein, expressed [Oryza
sativa Japonica Group] gi|113548294|dbj|BAF11737.1|
Os03g0295400 [Oryza sativa Japonica Group]
gi|222624742|gb|EEE58874.1| hypothetical protein
OsJ_10475 [Oryza sativa Japonica Group]
Length = 379
Score = 517 bits (1331), Expect = e-144
Identities = 263/380 (69%), Positives = 307/380 (80%), Gaps = 6/380 (1%)
Frame = +2
Query: 212 KNGGSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNS 391
K G SR+ + + KLP+HL QRTRVVC DAP++T+ QY+ A+A+MG+DNS
Sbjct: 3 KKGTKSRKGTDDEPKQEEKNKLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNS 62
Query: 392 STPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTS 571
+ D+FC +FKV V RL ED+MEFDM+GIDAS+ANAFRRILIAEVPTMAIEKVL+ +NTS
Sbjct: 63 VSADKFCKNFKVVVNRLTEDDMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTS 122
Query: 572 VIADEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQL 751
VIADE L+HRLGLIPLDADPRLFEY+SEND P ERNTIV+KL+V CK+G PRLTVKS L
Sbjct: 123 VIADEVLSHRLGLIPLDADPRLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDL 182
Query: 752 KWLPGGSELQMALPNPSA-KPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAI 928
+WLP GS+L +A P S K K+YT+FS+SQ + E KPLGVK +DI I+RLGPGQAI
Sbjct: 183 EWLPEGSQLPLASPAQSGDKQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAI 239
Query: 929 ELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVG 1108
ELE HAVKGIGKVHAKWSPV +AWYRMLPEVVL E+K DAE LV KCPV VFDIED+G
Sbjct: 240 ELEVHAVKGIGKVHAKWSPVATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLG 299
Query: 1109 RGEKKAVVTNPRACTLCRECIRGVSEE-----EAQVELRRVKDHFIFTIESAGALPPEVL 1273
GEK+AVV PRACTLCR+C+ G + E QVELRRV+DHFIFTIES GALPPE+L
Sbjct: 300 NGEKRAVVARPRACTLCRQCVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEML 359
Query: 1274 FTEAVKILEEKCDRVISELS 1333
FTEAV+ILEEKC+RVISELS
Sbjct: 360 FTEAVRILEEKCERVISELS 379
>ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
[Setaria italica]
Length = 372
Score = 516 bits (1330), Expect = e-144
Identities = 255/373 (68%), Positives = 310/373 (83%), Gaps = 2/373 (0%)
Frame = +2
Query: 221 GSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTP 400
G+ + D+ D KLPDHL QRTRVVCNADAPIHT QYS A+ MGVDNS +
Sbjct: 5 GTKSKKQVDDVLDQQENKLPDHLELQRTRVVCNADAPIHTQGYQYSGAFTVMGVDNSVSV 64
Query: 401 DRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIA 580
++FC +FK+ + RL ED+MEFDM+G+DAS+ANAFRRILI+EVPTMAIEK+ + +NTSVIA
Sbjct: 65 EKFCKNFKIDIKRLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVIA 124
Query: 581 DEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLC-KRGGPRLTVKSDQLKW 757
DE L+HRLGLIPLDADPRLF+Y+SEND PNERNTIV+KL+V C K+G PR+TVKS +L+W
Sbjct: 125 DEVLSHRLGLIPLDADPRLFDYISENDVPNERNTIVYKLHVSCPKKGSPRITVKSGELEW 184
Query: 758 LPGGSELQMALPNPSA-KPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIEL 934
LP GS+L MA P S KPK++T+FS+SQ + +KPLGVK +DI I+RLGPGQAIEL
Sbjct: 185 LPEGSQLSMASPGQSGDKPKTFTSFSQSQ---KDILQKPLGVKFKDITIARLGPGQAIEL 241
Query: 935 EAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRG 1114
EAHAVKG+GKVHAKWSPV +AWYRMLPEV +L++++ +AE+LVKKCPV VFDIED+G G
Sbjct: 242 EAHAVKGVGKVHAKWSPVATAWYRMLPEVEILKQIEDVNAEELVKKCPVNVFDIEDLGDG 301
Query: 1115 EKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKI 1294
K+AVV PRACTLCREC+ G S + +++LRRV+DHFIFTIES GALPPEVLFTEAVKI
Sbjct: 302 RKRAVVAKPRACTLCRECVMGPSGD--KIQLRRVRDHFIFTIESTGALPPEVLFTEAVKI 359
Query: 1295 LEEKCDRVISELS 1333
LEEKC++VISELS
Sbjct: 360 LEEKCEKVISELS 372
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 516 bits (1328), Expect = e-143
Identities = 252/379 (66%), Positives = 308/379 (81%)
Frame = +2
Query: 197 MAGKEKNGGSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASM 376
M+ K++N +++ S D+PDVP+G+LP HL QRTRVVC +DAPIHTD + YS AYAS+
Sbjct: 1 MSSKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASI 60
Query: 377 GVDNSSTPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLV 556
GVDNS D F +FKV+VI+L +D+MEFDM+GIDA++ANAFRRILI+E+PTMAIEKVL+
Sbjct: 61 GVDNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLI 120
Query: 557 VNNTSVIADEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTV 736
NNTS+I DE LAHRLGLIP++ADPRLFEYLS ND PNE+NTIVFKL+ CKRG PR TV
Sbjct: 121 ANNTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTV 180
Query: 737 KSDQLKWLPGGSELQMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGP 916
S++LKWLPGGS+L +KP +YT+F+ QD +P KP+ II+++LGP
Sbjct: 181 YSEELKWLPGGSQLLKESEKADSKPSTYTSFTDKQDFIP----KPVSPSEDKIIVAKLGP 236
Query: 917 GQAIELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDI 1096
GQ IELEAHAVKG+GK HAKWSPV +AWYRMLPEVVLL +++ + AE+L KKCPV VFDI
Sbjct: 237 GQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDI 296
Query: 1097 EDVGRGEKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLF 1276
ED+G G+K+A V PRACTLCRECIRG E + +V LRRVKDHFIFTIES GALPPEVLF
Sbjct: 297 EDIGNGKKRATVARPRACTLCRECIRG-GEWDKRVSLRRVKDHFIFTIESTGALPPEVLF 355
Query: 1277 TEAVKILEEKCDRVISELS 1333
TEAVK+LE+KC+RVI+ELS
Sbjct: 356 TEAVKVLEDKCERVITELS 374
>ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
[Brachypodium distachyon]
Length = 360
Score = 515 bits (1327), Expect = e-143
Identities = 257/366 (70%), Positives = 308/366 (84%), Gaps = 3/366 (0%)
Frame = +2
Query: 245 LDMPDVPV---GKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCS 415
+DM DVP KLPDHL +QRTRV C ADAP HT QYS A+A+MGVDNS + ++FC+
Sbjct: 1 MDMDDVPTQQRNKLPDHLERQRTRVTCKADAPTHTQGFQYSGAFAAMGVDNSVSVEKFCN 60
Query: 416 DFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLA 595
FK+++ RL ED+MEFDM+G+DAS+ANAFRRILIAEVPTMAIEKV +V+NTSVIADE L+
Sbjct: 61 SFKIKINRLTEDDMEFDMIGVDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVLS 120
Query: 596 HRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSE 775
HRLGLIPLDADPRLF+++S+ D PNERNTIV+KL+V C++G RLTVKS QL+WLP GS+
Sbjct: 121 HRLGLIPLDADPRLFDHISD-DVPNERNTIVYKLHVSCEKGSQRLTVKSGQLEWLPEGSQ 179
Query: 776 LQMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKG 955
L MA K K+YT+F +SQ ++ + + +GVK++DI I+RLGPGQAIELEAHAVKG
Sbjct: 180 LLMASAAQGEKQKTYTSFGQSQKNI---SGRSIGVKYKDITIARLGPGQAIELEAHAVKG 236
Query: 956 IGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVT 1135
+GKVHAKWSPV +AWYRMLPEVVLL+E+K +AE+LVKKCPV VFDIED+G G K+AVV
Sbjct: 237 VGKVHAKWSPVATAWYRMLPEVVLLKEIKDGEAEELVKKCPVNVFDIEDLGNGAKRAVVA 296
Query: 1136 NPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDR 1315
PRACTLCREC+ G + E QVELRRV+DHFIFTIES GALPPEVLFTEAVKILEEKC+R
Sbjct: 297 RPRACTLCRECVMGPTGE--QVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCER 354
Query: 1316 VISELS 1333
VISELS
Sbjct: 355 VISELS 360
>ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea mays]
gi|194690246|gb|ACF79207.1| unknown [Zea mays]
gi|413926820|gb|AFW66752.1| hypothetical protein
ZEAMMB73_992882 [Zea mays]
Length = 372
Score = 515 bits (1327), Expect = e-143
Identities = 257/375 (68%), Positives = 307/375 (81%), Gaps = 1/375 (0%)
Frame = +2
Query: 212 KNGGSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNS 391
K G S++ D+P+ KLPD+L QRTRVVCNADAPIHT QYS A+A+MG+DNS
Sbjct: 3 KKGTKSKKEKVDDVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGIDNS 62
Query: 392 STPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTS 571
+ D+FC +FK+++ RL ED MEFDM+GIDAS+ANAFRRILI+EVPTMAIEKV + +N S
Sbjct: 63 VSVDKFCKNFKIEINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNS 122
Query: 572 VIADEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQL 751
VIADE L+HRLGLIPLDADPRLFEY+SEND PNERNTIV+KL+V C + R+TVKS +L
Sbjct: 123 VIADEVLSHRLGLIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSSEL 182
Query: 752 KWLPGGSELQMALPNPSA-KPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAI 928
+WLP GS+L M+ P S K K++T+FS+SQ E +KPLGVK++DI I+RLGPGQAI
Sbjct: 183 EWLPEGSQLSMSAPAQSGDKQKTFTSFSQSQ---KEILEKPLGVKYKDITIARLGPGQAI 239
Query: 929 ELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVG 1108
ELEAHAVKG G VHAKWSPV +AWYRMLPEVV+L+EV+G AE+LV KC V VFDIED+
Sbjct: 240 ELEAHAVKGTGNVHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLA 299
Query: 1109 RGEKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAV 1288
G K+AVV PRACTLCREC+ G +E+ QVELRRV+DHFIFTIES G++PPEVLFTEAV
Sbjct: 300 NGGKRAVVARPRACTLCRECVMGPNEK--QVELRRVRDHFIFTIESTGSMPPEVLFTEAV 357
Query: 1289 KILEEKCDRVISELS 1333
KILEEKC RVISELS
Sbjct: 358 KILEEKCARVISELS 372
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 513 bits (1321), Expect = e-143
Identities = 253/371 (68%), Positives = 305/371 (82%), Gaps = 6/371 (1%)
Frame = +2
Query: 239 SALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSD 418
S D+PD+P GKLP H+ QRTRV+C + AP +T+ V YS AYA+MGVDNS ++F ++
Sbjct: 26 SVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFRNN 85
Query: 419 FKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAH 598
FKV+++RL EDE+EFDM+GID SLANAFRRILIAE+PTMAIEKVL+ NNTS+I DE LAH
Sbjct: 86 FKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVLAH 145
Query: 599 RLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSEL 778
RLGLIP++ DPRLFEY+SEND PNE+NTIVFKL+ C +G RL V S +LKWLP GSEL
Sbjct: 146 RLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLRVLSSELKWLPNGSEL 205
Query: 779 ----QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHA 946
+ + + SAKPK+YT+FS SQD++PEF+ P+ K DII+++LGPGQ IELEAHA
Sbjct: 206 ILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAPKDADIIVAKLGPGQEIELEAHA 265
Query: 947 VKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKA 1126
VKG+GK HAKWSPV +AWYRMLPEVVLLR+++ D+AE LVKKCPVKVFDIED+G+G+K+A
Sbjct: 266 VKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEALVKKCPVKVFDIEDIGKGKKRA 325
Query: 1127 VVTNPRACTLCRECIRGVSEE--EAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILE 1300
V PR CTLCRECIR EE + V LRRV DHFIFTIES GALPPEVLFTEAVKILE
Sbjct: 326 TVARPRICTLCRECIR---EEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILE 382
Query: 1301 EKCDRVISELS 1333
EKC+RVI+ELS
Sbjct: 383 EKCERVITELS 393
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 512 bits (1318), Expect = e-142
Identities = 253/371 (68%), Positives = 305/371 (82%), Gaps = 6/371 (1%)
Frame = +2
Query: 239 SALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSD 418
S D+PD+P GKLP H+ QRTRV+C + AP +T+ V YS AYA+MGVDNS ++F +
Sbjct: 26 SVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFRDN 85
Query: 419 FKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAH 598
FKV+++RL EDE+EFDM+GID SLANAFRRILIAE+PTMAIEKVL+ NNTS+I DE LAH
Sbjct: 86 FKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVLAH 145
Query: 599 RLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSEL 778
RLGLIP+ DPRLFEY+SEND PNE+NTIVFKL+V C +G RL V S +LKWLP GSEL
Sbjct: 146 RLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLRVLSSELKWLPNGSEL 205
Query: 779 ----QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHA 946
+ + + SAKPK+YT+FS SQD+ PEF+ +P+ K DII+++LGPGQ IELEAHA
Sbjct: 206 ILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAPKDADIIVAKLGPGQEIELEAHA 265
Query: 947 VKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKA 1126
VKG+GK HAKWSPV +AWYRMLPEV+LLR+++ D+AE LVKKCP+KVFDIED+G+G+K+A
Sbjct: 266 VKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEALVKKCPLKVFDIEDIGKGKKRA 325
Query: 1127 VVTNPRACTLCRECIRGVSEE--EAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILE 1300
V PRACTLCRECIR EE + V LRRV DHFIFTIES GALPPEVLFTEAVKILE
Sbjct: 326 TVARPRACTLCRECIR---EEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILE 382
Query: 1301 EKCDRVISELS 1333
EKC+RVI+ELS
Sbjct: 383 EKCERVITELS 393
>ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Setaria italica]
Length = 372
Score = 509 bits (1312), Expect = e-141
Identities = 251/373 (67%), Positives = 307/373 (82%), Gaps = 2/373 (0%)
Frame = +2
Query: 221 GSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTP 400
G+ + D+PD KLPDHL QRTRVVCNADAPIHT QYS YA+ GVDNS +
Sbjct: 5 GTKSKNQVGDVPDQQENKLPDHLELQRTRVVCNADAPIHTQGFQYSGTYAATGVDNSVSV 64
Query: 401 DRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIA 580
++FC +FK+ + L ED+MEFDM+G+DAS+ANAFRRILI+EVPTMAIEK+ + +NTSVIA
Sbjct: 65 EKFCKNFKIDIKHLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVIA 124
Query: 581 DEQLAHRLGLIPLDADPRLFEYLSENDAPNERNTIVFKLNVLC-KRGGPRLTVKSDQLKW 757
DE L+HRLGLIPLDADPRLF+Y+SEND PNERNTIV+KL+V C K+G R+TVKS +L+W
Sbjct: 125 DEVLSHRLGLIPLDADPRLFDYISENDVPNERNTIVYKLHVSCPKKGSQRITVKSGELEW 184
Query: 758 LPGGSELQMALPNPSA-KPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIEL 934
LP GS+L MA P S K K++T+FS+SQ + +KPLGVK +DI I+RLG GQAIEL
Sbjct: 185 LPEGSQLSMASPGQSGDKQKTFTSFSQSQ---KDILQKPLGVKFKDITIARLGAGQAIEL 241
Query: 935 EAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRG 1114
EAHAVKG+GKVHAKWSPV +AWYRMLPEV +L++++G DAE+LVKKCPV VFDIED+G G
Sbjct: 242 EAHAVKGVGKVHAKWSPVATAWYRMLPEVEILKQIEGVDAEELVKKCPVNVFDIEDLGDG 301
Query: 1115 EKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKI 1294
K+A+V PRACTLCR+C+ G S + +++LRRV+DHFIFTIES GALPPEVLFTEAVKI
Sbjct: 302 RKRAIVAKPRACTLCRQCVMGPSGD--KIQLRRVRDHFIFTIESTGALPPEVLFTEAVKI 359
Query: 1295 LEEKCDRVISELS 1333
LE KC++VISELS
Sbjct: 360 LEGKCEKVISELS 372
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 495 bits (1274), Expect = e-137
Identities = 247/380 (65%), Positives = 302/380 (79%), Gaps = 4/380 (1%)
Frame = +2
Query: 206 KEKNG-GSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGV 382
++KNG G +++ DVP KL HL +TRVVC+ DAP HTD + YS AYA++GV
Sbjct: 10 QKKNGNGGGILDFIMNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGV 68
Query: 383 DNSSTPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVN 562
DNS D FC +FKV+V +L +D++EFDM+GID SLANAFRRILIAEVPTMAIE+V + N
Sbjct: 69 DNSVRLDSFCQNFKVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIAN 128
Query: 563 NTSVIADEQLAHRLGLIPLDADPRLFEYLSENDAPN-ERNTIVFKLNVLCKRGGPRLTVK 739
NTS+I DE L+HRLGLIP++ADP LFEY N E+NTIVFKL+V C++G PR+TVK
Sbjct: 129 NTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVK 188
Query: 740 SDQLKWLPGGSEL--QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLG 913
SD+LKWLP GS+L PN +KPK++T+FS SQDS+PEF+KKPLG + DII+++LG
Sbjct: 189 SDELKWLPNGSDLIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLG 248
Query: 914 PGQAIELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFD 1093
PGQ IELE HAVKG+GK HAKWSPV +AWYRMLPEVVL +V + A++LV KCPV VFD
Sbjct: 249 PGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFD 308
Query: 1094 IEDVGRGEKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVL 1273
IED+G+G K+A V PRACTLCRECIRG E E +V LRRVKDHFIFTIES GA+PPEVL
Sbjct: 309 IEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVL 368
Query: 1274 FTEAVKILEEKCDRVISELS 1333
FT+AVKILE+KC+RVI+ELS
Sbjct: 369 FTQAVKILEDKCERVITELS 388
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 494 bits (1271), Expect = e-137
Identities = 243/379 (64%), Positives = 301/379 (79%), Gaps = 3/379 (0%)
Frame = +2
Query: 206 KEKNGGSSRRPSALDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVD 385
K+ + G +++ DVP KL HL +TRVVC+ DAP HTD + YS AYA++GVD
Sbjct: 11 KKNDNGGGILDFIMNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVD 69
Query: 386 NSSTPDRFCSDFKVQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNN 565
NS D FC +FKV+V +L +D++EFDM+GID SLANAFRRILIAEVPTMAIE+V + NN
Sbjct: 70 NSVRLDSFCRNFKVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANN 129
Query: 566 TSVIADEQLAHRLGLIPLDADPRLFEYLSENDAPN-ERNTIVFKLNVLCKRGGPRLTVKS 742
TS+I DE L+HRLGLIP++ADP LFEY N E+NTIVFKL+V C++G PR+ VKS
Sbjct: 130 TSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRIIVKS 189
Query: 743 DQLKWLPGGSEL--QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGP 916
D+LKWLP GS+L PN +KPK++T+FS SQDS+PEF+K+PLG + DII+++LGP
Sbjct: 190 DELKWLPNGSDLIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTYPDIILAKLGP 249
Query: 917 GQAIELEAHAVKGIGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDI 1096
GQ IELE HAVKG+GK HAKWSPV +AWYRMLPEVVL+ +VK + A++LV KCPV VFDI
Sbjct: 250 GQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELVTKCPVNVFDI 309
Query: 1097 EDVGRGEKKAVVTNPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLF 1276
ED+G+G K+A V PRACTLCRECIRG E E +V LRRVKDHFIFTIES GA+PP+VLF
Sbjct: 310 EDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLF 369
Query: 1277 TEAVKILEEKCDRVISELS 1333
T+AVKILE+KC+RVI+ELS
Sbjct: 370 TQAVKILEDKCERVITELS 388
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 491 bits (1264), Expect = e-136
Identities = 244/366 (66%), Positives = 296/366 (80%), Gaps = 3/366 (0%)
Frame = +2
Query: 245 LDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSDFK 424
L + +VP KLP HL +TRV+CN DAP+HTD VQYS AYA +GVDNS D FC +FK
Sbjct: 24 LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENFK 82
Query: 425 VQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAHRL 604
V+V RL + ++EFDM+GID ++ANAFRRILIAEVPTMAIE+V + NNTSV+ DE L+HRL
Sbjct: 83 VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 142
Query: 605 GLIPLDADPRLFEYLSE-NDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSEL- 778
GLIP+ ADPRLFEY D NE+NTIVFKL+V C+ G PR+TVKSD+LKWLP GSEL
Sbjct: 143 GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELP 202
Query: 779 -QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKG 955
+ PN +KPK++T+F+ SQDS+PEF+ +G+ + DII+++LGPGQ IELEAHAVKG
Sbjct: 203 CEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKG 262
Query: 956 IGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVT 1135
IGK HAKWSPV +AWYRMLPEVVLL V+ + AE+L KCPV VFDIED+G+G+++A V
Sbjct: 263 IGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVA 322
Query: 1136 NPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDR 1315
PR CTLCRECIRG E E +V LRRVK+HFIFTIES GALPPEVLFTEAVKILE+KC+R
Sbjct: 323 RPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 382
Query: 1316 VISELS 1333
VI+ELS
Sbjct: 383 VITELS 388
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 491 bits (1263), Expect = e-136
Identities = 243/366 (66%), Positives = 296/366 (80%), Gaps = 3/366 (0%)
Frame = +2
Query: 245 LDMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSDFK 424
L + +VP KLP HL +TRV+CN DAP+HTD VQYS AYA MGVDNS D FC +FK
Sbjct: 29 LSLDNVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFK 87
Query: 425 VQVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAHRL 604
V+V RL + ++EFDM+GID ++ANAFRRILIAEVPTMAIE+V + NNTSV+ DE L+HRL
Sbjct: 88 VEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRL 147
Query: 605 GLIPLDADPRLFEYLSE-NDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSEL- 778
GLIP+ ADPRLFEY D NE+NTIVFKL+V C+ G PR+TVKSD+LKWLP GSEL
Sbjct: 148 GLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSELP 207
Query: 779 -QMALPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKG 955
+ PN +KPK++T+F+ SQDS+PEF+ +G+ + DII+++LGPGQ IELEAHAVKG
Sbjct: 208 CEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKG 267
Query: 956 IGKVHAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVT 1135
GK HAKWSPV + WYRMLPEVVLL++V+ + AE+L KCPV VFDIED+G+G+++A V
Sbjct: 268 TGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVA 327
Query: 1136 NPRACTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDR 1315
PR CTLCRECIRG E E +V LRRVK+HFIFTIES GALPPEVLFTEAVKILE+KC+R
Sbjct: 328 RPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 387
Query: 1316 VISELS 1333
VI+ELS
Sbjct: 388 VITELS 393
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 490 bits (1262), Expect = e-136
Identities = 246/362 (67%), Positives = 282/362 (77%)
Frame = +2
Query: 248 DMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSDFKV 427
D+PDVP G LP HL QRTR VC DAPIH V YS AYASMGVDNS + F DFKV
Sbjct: 25 DLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDFKV 83
Query: 428 QVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAHRLG 607
VI L E M FDM+G+ A +ANAFRRIL+AE+P+MAIEKV V NNTSVI DE LAHRLG
Sbjct: 84 DVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHRLG 143
Query: 608 LIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSELQMA 787
LIP+ ADPRLFEYLSEND PNE+NTIVFKL+V C +G PR V + +LKWLP GSEL
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSELVKE 203
Query: 788 LPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKGIGKV 967
+ KPK+YT+FS SQDS P F K P+ QDI+I++LGPGQ IELEAHAVKGIGK
Sbjct: 204 SGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAVKGIGKT 263
Query: 968 HAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVTNPRA 1147
HAKWSPV +AWYRMLPEV+LL+E +G AE+LVK CP KVFDIED+G+G K+A V PR
Sbjct: 264 HAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVARPRD 323
Query: 1148 CTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDRVISE 1327
C+LCRECIR E QV+LRRVK+HFIFTIES G+ PP+VLF EAVKILE+KC+RVISE
Sbjct: 324 CSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKCERVISE 383
Query: 1328 LS 1333
LS
Sbjct: 384 LS 385
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 490 bits (1261), Expect = e-136
Identities = 240/362 (66%), Positives = 286/362 (79%)
Frame = +2
Query: 248 DMPDVPVGKLPDHLHKQRTRVVCNADAPIHTDPVQYSAAYASMGVDNSSTPDRFCSDFKV 427
++ DV G+LP H+ KQ TRV C DAP +T+ +QYS +YASMGVDNS D F +F++
Sbjct: 30 NLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRI 89
Query: 428 QVIRLAEDEMEFDMVGIDASLANAFRRILIAEVPTMAIEKVLVVNNTSVIADEQLAHRLG 607
+VI L +D+MEFDM+GIDA++ANAFRRILI+EVPTMAIEKV + NNTSVI DE LAHRLG
Sbjct: 90 KVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLG 149
Query: 608 LIPLDADPRLFEYLSENDAPNERNTIVFKLNVLCKRGGPRLTVKSDQLKWLPGGSELQMA 787
LIP+ DPRLFEYLS ND PNE+NTIV KL+ C RG PR +V S +LKWLP GSE
Sbjct: 150 LIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQELKWLPNGSEFAKE 209
Query: 788 LPNPSAKPKSYTAFSRSQDSMPEFTKKPLGVKHQDIIISRLGPGQAIELEAHAVKGIGKV 967
P +KP +YT+FS QDS+PEF P+ +DII+++LGPGQ IELEAHAVKG+GK
Sbjct: 210 SEKPDSKPSTYTSFSCGQDSLPEFAGNPISTV-EDIILAKLGPGQEIELEAHAVKGMGKT 268
Query: 968 HAKWSPVCSAWYRMLPEVVLLREVKGDDAEKLVKKCPVKVFDIEDVGRGEKKAVVTNPRA 1147
HAKWSPV +AWYRM PEVVLL +KG+DAE+L++KCP VFDIED G +KKA+V + RA
Sbjct: 269 HAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDIEDTGNAKKKAIVADSRA 328
Query: 1148 CTLCRECIRGVSEEEAQVELRRVKDHFIFTIESAGALPPEVLFTEAVKILEEKCDRVISE 1327
CTLCRECIRG E E +V L RVKDHFIFTIES GALPPEVLFTEAVKILE KC+RVI+E
Sbjct: 329 CTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKCERVITE 388
Query: 1328 LS 1333
LS
Sbjct: 389 LS 390