BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00012611
         (4649 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004985284.1| PREDICTED: DNA repair protein UVH3-like isof...   948   0.0  
ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [S...   922   0.0  
gb|EMT05059.1| DNA repair protein UVH3 [Aegilops tauschii]            911   0.0  
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   898   0.0  
dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]    896   0.0  
ref|XP_006649592.1| PREDICTED: DNA repair protein UVH3-like [Ory...   894   0.0  
ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824...   872   0.0  
ref|XP_006357146.1| PREDICTED: DNA repair protein UVH3-like isof...   853   0.0  
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              853   0.0  
ref|XP_006357145.1| PREDICTED: DNA repair protein UVH3-like isof...   847   0.0  
ref|XP_004985285.1| PREDICTED: DNA repair protein UVH3-like isof...   840   0.0  
ref|XP_006373279.1| hypothetical protein POPTR_0017s10670g [Popu...   831   0.0  
ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3-like [Sol...   814   0.0  
ref|XP_006848746.1| hypothetical protein AMTR_s00026p00019230 [A...   813   0.0  
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   803   0.0  
gb|EMS51028.1| DNA repair protein UVH3 [Triticum urartu]              797   0.0  
gb|EOY02333.1| DNA-repair protein UVH3, putative isoform 1 [Theo...   768   0.0  
gb|EOY02334.1| DNA-repair protein UVH3, putative isoform 2, part...   768   0.0  
ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citr...   761   0.0  
ref|XP_004304600.1| PREDICTED: uncharacterized protein LOC101313...   760   0.0  

>ref|XP_004985284.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Setaria italica]
          Length = 1495

 Score =  948 bits (2450), Expect = 0.0
 Identities = 640/1561 (40%), Positives = 833/1561 (53%), Gaps = 84/1561 (5%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF++A+RDD SG+  R AHLLGFLRRI KLLFLR RPVFVFDGATPALKRRTLAAR R R
Sbjct: 37   QFMRAMRDD-SGEMVRDAHLLGFLRRICKLLFLRVRPVFVFDGATPALKRRTLAARRRHR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRT---------------DSKSNSKGKQV 316
            D A++K+RKTAEKLLL+HLK+++LEELA +IR                 D ++ +K +  
Sbjct: 96   DAAQAKVRKTAEKLLLSHLKSRKLEELAEQIRSDRAKHDAKGKQVGSSRDGENENKNQDQ 155

Query: 317  ARDGDDG-----AATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 475
             ++GD        A+ NQ+                                         
Sbjct: 156  NQNGDTNNSEGTIASINQEKMDEMLAASLAAEEETGFTGEGKHFTSVPLQEGAEIDDDDD 215

Query: 476  ----MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSEL 643
                MI P T  G IDP VLASLPPSMQLDLLVQMRER+MAENRQ+YQ IKK P+KFSEL
Sbjct: 216  DDEGMIIPMTT-GDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQTIKKEPAKFSEL 274

Query: 644  QIQSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAG 823
            QIQSYLKTVAFRREID+VQKC+ G+G+GGVQTS+IASEAN+EFIFS+SFTGDKQ LT  G
Sbjct: 275  QIQSYLKTVAFRREIDQVQKCSAGKGVGGVQTSKIASEANREFIFSTSFTGDKQMLTQRG 334

Query: 824  IGRNGDTDHNASKNRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXX 1003
                     NA   R   ++   S   S+S     S +K  ++FGP VETY D+      
Sbjct: 335  --EKEQIVDNAQSKREINSAVFRSNPTSSSRTTEPSTSKHLRNFGPDVETYRDERGRIRV 392

Query: 1004 XXXXXXXXXMTRDLQRNLDLMKEYEEEKF--------GENIGNEVHDTSKVFSGSTFSAK 1159
                     MTRD+QRNLD +KE E+ K         G  +  E  D  +    S     
Sbjct: 393  SRVRAMGIRMTRDIQRNLDFIKENEQVKSRVHTNVHKGSTVSEEPPDFPEHLFESNKLQS 452

Query: 1160 ASACSEENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTVDELFL 1339
            + +  E+  +   +N   SS    ++   E S  GNK  +E+SF++D +E KD  D++FL
Sbjct: 453  SLSLDEDFLETAEDNHQTSSLVRGSNNISESSCYGNKETMEISFMDDQTEVKDNYDDIFL 512

Query: 1340 HLVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHP 1519
            HL SG+++                         GV+E  T+      K N+S      + 
Sbjct: 513  HLASGTASDLFADNDCLAKNMEEPEGSECIWEEGVIEGETLPIKLDEKGNNSAPE---NC 569

Query: 1520 EDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGIL 1699
             DDEV+WEEG    P V S S+    N +  G LEEEA +QEAIRRSLEDF++  S  + 
Sbjct: 570  SDDEVEWEEGDSLVPGVASSSEHNTYNVLK-GDLEEEALLQEAIRRSLEDFDKQASENVS 628

Query: 1700 PDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCK 1879
             +D               M+ S ++R +  +    D  P  S +P               
Sbjct: 629  TED---------------MQASVEDRPLQFS----DDVPKISEAPV-------------- 655

Query: 1880 KKTGQTKIDPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTP 2059
                          SSH+G      ++L  ETN+      ++ +   +   G +G  +  
Sbjct: 656  ------------ETSSHSG------AALVKETNEKSRTEINSDENDMIHGTGQIGIYRQK 697

Query: 2060 TAKSVQACLEEGSMDSFKQGEDETL-LMEPTEAFVGLSANVNLEANCSSLDKAPDTVVTD 2236
                 Q    +G +D  +    E L L   + + +    + + +ANC ++     T + +
Sbjct: 698  NEIQPQLVNNDGQVDMHRAHLLEPLPLCSTSTSNLAEKTSDSSKANCDNV-MISRTEIPE 756

Query: 2237 MHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFG- 2413
            MH+ D +D                Q+ +++   L   K  +++L ++  ++ T E     
Sbjct: 757  MHVDD-RDKNMDQNSMNPNQTKCSQDVAIIGETL---KSPQKDLLVDEPVADTTEPKEND 812

Query: 2414 -----CESTIQESFTKE--------VSESALDEEISLLRQERKDLGDEQKKLERNAESVS 2554
                   ST + ++T+         +S + LDEE+S LRQE+ DLG E++KLE +AESVS
Sbjct: 813  TEGDLMVSTSEINYTQVGDNDDNHGISATYLDEELSRLRQEQVDLGHERRKLESHAESVS 872

Query: 2555 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNI 2734
            SEMF ECQELLQMFGLPYIIAPMEAEAQCAYMEM  LVDGVVTDDSDVFLFGAR+VYKNI
Sbjct: 873  SEMFTECQELLQMFGLPYIIAPMEAEAQCAYMEMSKLVDGVVTDDSDVFLFGARNVYKNI 932

Query: 2735 FDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEED 2914
            FDDRKYVETYFMKDIESELGLTR++LIRMA+LLGSDYTEGVSGIGIVNAIEVVHAFPEED
Sbjct: 933  FDDRKYVETYFMKDIESELGLTRQQLIRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEED 992

Query: 2915 GLCKFKEWIESPDPSILGKL------KTKSCKASNNNADGTGNNVEESVCEGNISRQPKD 3076
            GL KFKEWIESPDPSI G+L      K+K  K   N +DG G  +E    +G+      D
Sbjct: 993  GLQKFKEWIESPDPSIFGQLHMETSSKSKKRKPGGNYSDGKGKGLEPECDQGS------D 1046

Query: 3077 QPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLF 3256
               AN+  +IK+IFM KHRNVSKNWHIP++FPS+SVISAYI+PQVD STE FSWG+PDL 
Sbjct: 1047 DLSANETERIKKIFMSKHRNVSKNWHIPAAFPSESVISAYITPQVDNSTEPFSWGRPDLG 1106

Query: 3257 LLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVK 3436
            LLRKLCWE+FGW  +KADELL+PVL+EYNKHETQLR+EAFY+FNERFAKIRS+RIKKA+K
Sbjct: 1107 LLRKLCWERFGWGKEKADELLLPVLREYNKHETQLRMEAFYSFNERFAKIRSKRIKKAIK 1166

Query: 3437 GITGTSSSELMDNHMQELSKSRTKGRLRSSGLKESKLEVHSDGTNVRGRKVSKPSRQENT 3616
            GITG S  +  +      S S+T  +      K++    H+ G   RGR   + S   N 
Sbjct: 1167 GITGKSFPDTDETEQDNPSASKTTKK------KDASSSSHARG---RGRGKMRSSEIRNM 1217

Query: 3617 EIKVTQTDGHAALHTSFQVGGNGKSGLHAD-VQXXXXXXXXXXXXXXXXXXXXXXXXXXX 3793
            E   +  D   +   SF           AD V+                           
Sbjct: 1218 E---SPEDKETSDPNSF-----------ADVVELTKESNNTNKSKKGRPPGCSKGRGRSR 1263

Query: 3794 XXXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEG 3973
                     ++ DS     +S+SDE  H    G    +  +  A RRS+R+RK V Y E 
Sbjct: 1264 KNAGHGATGSQVDSDTKYSSSASDEDSHKTHAG---NYKSEGIAPRRSSRKRKQVSYME- 1319

Query: 3974 EVDVDEVCCSSIPIDGXXXXXXXXXXXXXXIWG--------------------------- 4072
              D DE   + +P+                I G                           
Sbjct: 1320 --DGDEADGNDVPVHQNSENDPGEAAANTDIVGQDTELNPVHQDASELNSNQMQTDTGTA 1377

Query: 4073 EVVAGDASGVDQVGKQSHLEERCFKDYLLSGGGFCEDESDELGVGGQHVASPVRDSVGPL 4252
            E ++GD+ G +   ++ H  +   KDYL +GGGFC ++ DE    G    + + +     
Sbjct: 1378 EDISGDSQGFEL--REDHQADSAPKDYLFTGGGFCMEDGDEQEPAGDRCGAEMEEPGTSD 1435

Query: 4253 EEQTQISGSLPGHDDLNSSCNELNQQPVLQTSSPLEHGSGEQVPKPGLRAMPSL-KRKRK 4429
                 I  S  G     S+  E  +   ++              + GL AMP+L KR+RK
Sbjct: 1436 PSDLIIGVSDSGKSASLSTAGECTENAGMEARGASSSEQRRNASR-GLSAMPTLTKRRRK 1494

Query: 4430 T 4432
            +
Sbjct: 1495 S 1495


>ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
            gi|241922167|gb|EER95311.1| hypothetical protein
            SORBIDRAFT_01g043560 [Sorghum bicolor]
          Length = 1489

 Score =  922 bits (2382), Expect = 0.0
 Identities = 645/1560 (41%), Positives = 830/1560 (53%), Gaps = 83/1560 (5%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF++A+RDD SG+  R AHLLGFLRRI KLLFLR RPVFVFDGATPALKRRTLAAR R R
Sbjct: 37   QFMRAMRDD-SGEMVRDAHLLGFLRRICKLLFLRVRPVFVFDGATPALKRRTLAARRRHR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSK--SNSKGKQVARDG--------- 328
            D A++K+RKTAEKLLL+HLK ++LEELA +IR   +K  +  K  + +++G         
Sbjct: 96   DAAQAKVRKTAEKLLLSHLKARKLEELAEQIRSDRAKHDAKGKQVESSKEGETEKTSQNQ 155

Query: 329  -------DDGAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---- 475
                   +  AA+ NQ+                                           
Sbjct: 156  IGDTNNSEGNAASINQEKVDEMLAASLAAEEEADFTDEGKHHFTSVPLPEGAEIDEDEDD 215

Query: 476  ---MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQ 646
               MI+P T  G IDP VLASLPPSMQLDLLVQMRER+MAENRQ+YQKIKK P+KFSELQ
Sbjct: 216  DEGMIFPMTT-GDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQ 274

Query: 647  IQSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGI 826
            IQSYLKTVAFRREID+VQK A G+G GGVQTS+IASEAN+EFIFSSSFTGDKQ L     
Sbjct: 275  IQSYLKTVAFRREIDQVQKSAAGKGGGGVQTSKIASEANREFIFSSSFTGDKQMLA---- 330

Query: 827  GRNGDTDHNA--SKNRGSLTSASCSIGRSNS--AVGSSSIAKSPKDFGPGVETYYDDXXX 994
             +  + +HN   +K++  + S+  +   +NS   +   + +K  +DFGP VETY D+   
Sbjct: 331  -QRREKEHNVENTKSKKEINSSVFTSNPTNSLGTMKPPNSSKPSRDFGPDVETYRDERGR 389

Query: 995  XXXXXXXXXXXXMTRDLQRNLDLMKEYEEEKFGENIGNEVHDTSK------VFSGSTFSA 1156
                        MTRD+QRNLD +KE E+ K        VH+ S       VF    F +
Sbjct: 390  IRVSRVRAMGIRMTRDIQRNLDFIKENEQVKSKGQTQTSVHNGSTGNEEPPVFPEHLFES 449

Query: 1157 KA--SACS--EENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTV 1324
                S+C+  E+  +   EN   SS+   A    E S  GNK AIE+SF  D +E KD  
Sbjct: 450  NKLQSSCNPDEDLSETDRENHQTSSQVEAADNISESSCHGNKEAIEISFSVDQTELKDGD 509

Query: 1325 DELFLHLVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISA 1504
            +++FL LVSGS++         +               GV+E  T +P +  K ND  S+
Sbjct: 510  EDIFLQLVSGSTSNMFSGNNCLVKNTEESEDSECIWEDGVIEAGT-SPMKVGK-NDHKSS 567

Query: 1505 EQIHPEDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPK 1684
               +  DDE++WEEG    P V S S+    NA   G LEE A +QEAIRRSLEDFE+  
Sbjct: 568  LPENCSDDEMEWEEGDSFAPGVASSSEHNPCNAPK-GDLEEAALVQEAIRRSLEDFEKKA 626

Query: 1685 SSGILPDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQL 1864
            S  +   D         +ES++   +                  V   S  +G++     
Sbjct: 627  SENVSTGDI--------QESVEDRSLQFSNN-------------VPKISEALGEN----- 660

Query: 1865 YYPCKKKTGQTKIDPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLG 2044
                   +G   ++  N+  +      D +  +      G+    +  + Q V +DG LG
Sbjct: 661  ----DSHSGVPVVEEINN-ETRTEINCDKDDMVQGTGLLGIDRQENETRPQLVKNDGHLG 715

Query: 2045 TLQTPTAKSVQACLEEGSMDSFKQGEDETLLME--PTEAFVGLSANVNLEANCSSLDKAP 2218
            ++   T  +     E+ S  +   GED  +     P  A        NL    S   K  
Sbjct: 716  SVPLCTTFTSNLA-EKPSNSTEANGEDVMIFTTKLPGTAVGDCDKTSNLNIMNSDQSKCS 774

Query: 2219 DTVV----TDMHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAI 2386
            + +     T  H +DL                      +++  L    E K+N    +  
Sbjct: 775  NDIASTGETLSHQKDL----------------------LIDELLADTAEQKENATQVDLK 812

Query: 2387 STTGESSFGCESTIQESFTKEVSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMF 2566
              T E  +       ++ T  +S S +D E+S LRQE+ DLG E++KLE +AESVSSEMF
Sbjct: 813  FATSEIDYTQICDNDDNHT--ISASYVDAELSRLRQEQIDLGHERRKLESHAESVSSEMF 870

Query: 2567 AECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDR 2746
            AECQELLQMFGLPYIIAP EAEAQCAYME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDR
Sbjct: 871  AECQELLQMFGLPYIIAPTEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDR 930

Query: 2747 KYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCK 2926
            KYVETYFMKDIESELGLTRE+LIRMA+LLGSDYTEGVSGIGIVNAIEVVHAFPEEDGL K
Sbjct: 931  KYVETYFMKDIESELGLTREQLIRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQK 990

Query: 2927 FKEWIESPDPSILGKL------KTKSCKASNNNADGTGNNVEESVCEGNISRQPKDQPDA 3088
            FKEWIESPDPSI GKL      ++K  K   N++DG G  +E    +G+      D+  +
Sbjct: 991  FKEWIESPDPSIFGKLHVEASGRSKKRKLGGNDSDGKGKGLEPECIQGS-----DDKQSS 1045

Query: 3089 NDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRK 3268
            N+   +KEIFM KHRNVSKNWHIP++FPS+SV++AYISPQVD S E FSWG+PDL LLRK
Sbjct: 1046 NEAEHVKEIFMSKHRNVSKNWHIPATFPSESVVNAYISPQVDNSMEPFSWGRPDLGLLRK 1105

Query: 3269 LCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITG 3448
            LCWE+FGW  +KADELL+PVL+EYNKHETQLR+EAFY+FNERFAKIRS+RIKKA+KGITG
Sbjct: 1106 LCWERFGWGKEKADELLIPVLREYNKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG 1165

Query: 3449 TSSSELMDNHMQELSKSRTKGRLRSSGLKESKLEVHSDGTNVRGRKVSKPSRQENTEIKV 3628
             S  +  +      S S+T  +      KE+    H+ G   R +  S     E+ E  V
Sbjct: 1166 KSFLDTDEPEPDNPSTSKTIKK------KEANSSSHARGRGKR-KNNSGIRNMESQEDNV 1218

Query: 3629 TQTDGHAALHTSFQVGGNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3808
              T+  A      +   N                                          
Sbjct: 1219 GDTNSLADTVEITRENNNTTKRKRGS-------------PCGRSKGRGRSRTNAGNDATI 1265

Query: 3809 XQEEAEFDSTEFAEASSSDES--MHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEGEVD 3982
             QE+ E    E++ ++S ++S   HS+  G       +  A RRS+R+RK V Y E   D
Sbjct: 1266 SQEDYEI---EYSTSASDEDSCKRHSNSYG------SEGRALRRSSRKRKQVTYME---D 1313

Query: 3983 VDEVCCSSIPIDGXXXXXXXXXXXXXXIWGE--------------------VVAGDASGV 4102
              E   + +P+                + GE                    + AG    +
Sbjct: 1314 GHEAYDNDVPMHQNDENNPGQAAAVADMAGEDTGFNLYHQDTSELNSSRMHIGAGTTEDI 1373

Query: 4103 DQVGKQSHLEE-----RCFKDYLLSGGGFCEDE---SDELGVGGQHVASPVRDSVGPLEE 4258
            ++  +   L E        KDYL SGGGFC +E   +++   G Q  A    +  GP + 
Sbjct: 1374 NEDSQDFELREDNQVDSAPKDYLFSGGGFCMEEGEGNEQEPAGHQSGAEIEPEPSGPCDA 1433

Query: 4259 QTQISGSLPGHD-DLNSSCNELNQQPVLQTSSPLEHGSGEQVPKPGLRAMPSL-KRKRKT 4432
               +S S           C E         SS  +     +    G  AMP+L KR+RK+
Sbjct: 1434 MDGVSESCKSASLSTAGECTENASMEARGASSSQQRRKASR----GFSAMPTLTKRRRKS 1489


>gb|EMT05059.1| DNA repair protein UVH3 [Aegilops tauschii]
          Length = 1487

 Score =  911 bits (2355), Expect = 0.0
 Identities = 611/1475 (41%), Positives = 816/1475 (55%), Gaps = 77/1475 (5%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF++A+RDD+ GD  R AH+LGFLRRI KLLFLRARPVFVFDGATPALKRRTLAAR R R
Sbjct: 37   QFMRAMRDDK-GDMVRDAHILGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRNR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKGKQVAR------------- 322
            D A++K+RKTAEKLL++HLK  RLEELAA+I+   +K ++KGKQV               
Sbjct: 96   DAAQAKVRKTAEKLLISHLKASRLEELAAQIKSDRAKHDAKGKQVESSRGEETEKTDGGQ 155

Query: 323  ----DGDD--GAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 475
                DG++  GAA P  Q                                          
Sbjct: 156  NRNDDGENSRGAAAPINQEKLDELLAASLAAEDEAGLTGKGEHNPASVPSQEGTGIDEDE 215

Query: 476  ------MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFS 637
                  MI+P T  G IDP VLASLPPSMQLDLLVQMRER+MAENRQ+YQKIKK P+KFS
Sbjct: 216  NDDDEEMIFPITT-GDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFS 274

Query: 638  ELQIQSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTS 817
            ELQIQSYLKTVAFRREI+EV+K A G+ +GG+QTS+IASEAN+EFIFSSSFTGDKQ L  
Sbjct: 275  ELQIQSYLKTVAFRREIEEVRKGAAGKDVGGIQTSKIASEANREFIFSSSFTGDKQTLAQ 334

Query: 818  AGIGRNGDTDHNASKNRGSLTSASCSIGRSNSAVGSSSIAKSPKD-FGPGVETYYDDXXX 994
             G+    +   ++ K++  ++SA      S+S+      +  P   FGP VETY D+   
Sbjct: 335  RGVE---EQIVDSCKSKREISSAIFKSSPSSSSRSIKPHSGEPSTGFGPDVETYRDERGR 391

Query: 995  XXXXXXXXXXXXMTRDLQRNLDLMKEYEEEKF--------GENIGNEVHDTSKVFSGSTF 1150
                        MTRD+QRNLD +KE+E+ K         G     E  D  +    +  
Sbjct: 392  VRVSRVRGMGIRMTRDIQRNLDFIKEHEQAKSMGQANIGKGSTSNEEPPDFPEHLFENDG 451

Query: 1151 SAKASACSEENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTVDE 1330
               +   SE+  + I +N   SS    +    E S  G+K  IE+SFV+D    KD  D+
Sbjct: 452  LQSSVGLSEDFAETIGDNHHTSSLVGGSDDISEGSCHGSKETIEISFVDDQIGVKDNDDK 511

Query: 1331 LFLHLVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQ 1510
            LFLHLVSG+S+     +                   G++EE T+ P + ++++   S   
Sbjct: 512  LFLHLVSGTSSKLFADDDRLAKNTEESDNSEGIWEEGIIEEETL-PMKVDEKDYQSSPPD 570

Query: 1511 IHPEDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSS 1690
                DDEV+WEEGVC    V S    + +  +  G +EEEA IQEAI+RSLED E+ +  
Sbjct: 571  NCCTDDEVEWEEGVCDVREVPSSEYNQCK--LPKGDIEEEALIQEAIKRSLEDSEKQEFE 628

Query: 1691 GILPDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYY 1870
              +P+D  T +     +S+QS     K     +T       P S       ++ + +   
Sbjct: 629  NGVPEDLKTPIE---DKSLQSHDNVPKPSEAPAT-------PYSHSEASFVEETIKET-- 676

Query: 1871 PCKKKTGQTKI--DPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLG 2044
              K  +G+  +  DPE   +     R + E     E+N G   S+ +   +S      + 
Sbjct: 677  GIKNSSGEDGVMHDPEVLEAE----RKENEKQAQLESNDGRAASNTDYSQES----SPVY 728

Query: 2045 TLQTPTAKSVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSANVNLEANCSSLDKAPDT 2224
             + T T  +  +C  +         +D   ++  T         V ++ N S+  K+ + 
Sbjct: 729  NVSTSTLTARPSCSPKV--------QDNDAIVSATSIHECPKEEV-IKQNTSNSHKS-EC 778

Query: 2225 VVTDMHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGES 2404
               D ++ D+                  Q++ +++  +  D   K+N+   +   TT E 
Sbjct: 779  NKNDPYIGDIS--------------MAAQKEPLMDELVAGDAVQKENIIQEDMNVTTSEI 824

Query: 2405 SFGCESTIQESFTKEV-SESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQE 2581
            +    + + E++   + SE+ L++EIS LRQE+ DLG+E++KLE +AESVSSEMFAECQE
Sbjct: 825  N---STQLNENYDSHIISENNLEKEISFLRQEQLDLGNERRKLESHAESVSSEMFAECQE 881

Query: 2582 LLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 2761
            LLQMFGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVET
Sbjct: 882  LLQMFGLPYIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVET 941

Query: 2762 YFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWI 2941
            Y MKDIESELGLTRE+LIRMA+LLGSDYTEG+SGIGIVNAIEVVHAFPEEDGL +F+EWI
Sbjct: 942  YLMKDIESELGLTREQLIRMALLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQQFREWI 1001

Query: 2942 ESPDPSILGKLKTKSCKASNNNADGTGNNVEESVCEGNISRQPK------DQPDANDGSK 3103
            ESPDP+ILGK   ++  +S     G GN      CE   S++P+      +   +N+   
Sbjct: 1002 ESPDPAILGKFDVETSGSSKRRKSG-GN----EFCEKRNSQEPECVEGSDNNQSSNETQH 1056

Query: 3104 IKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEK 3283
            IKE+FM  HRNVSKNWHIP++FPS++VISAYISPQVD STE FSWG+PDL LLRKLCWE+
Sbjct: 1057 IKEVFMSNHRNVSKNWHIPTTFPSETVISAYISPQVDDSTERFSWGRPDLSLLRKLCWER 1116

Query: 3284 FGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSE 3463
            FGW+ +KADELL+PVLKEYNKHETQLR+EAFY+FNERFAKIRS+RI+KA+KGITG + SE
Sbjct: 1117 FGWNKEKADELLLPVLKEYNKHETQLRMEAFYSFNERFAKIRSKRIQKAIKGITGKTFSE 1176

Query: 3464 LMDNHMQELSKSRT--------KGRLRSSGLKESKLEVHSDGTNVRGRKVSKPSRQENTE 3619
              + +    S S            R +  G + + +E  + G+     K+  P+   + +
Sbjct: 1177 TDELNEDSPSTSDAPNKKEAGRSSRAKPKGKRNTSVEPRNMGSQ-EDDKIGDPNSFADAD 1235

Query: 3620 --IKVTQTDGHAALHTSFQVGGNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXX 3793
              +K  +         S +  G G+  ++  ++                           
Sbjct: 1236 QLVKEQRNASKKTASPSGRSRGRGRKKVNVRLE--------------------------- 1268

Query: 3794 XXXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEG 3973
                  +E+ E   +      S+DE  H   +    K+  +    RRS R+R  V Y E 
Sbjct: 1269 --TTIDEEDLEVQMSNL----SADEDSHKRHID---KYKSEGMTVRRSNRKRNQVTYMED 1319

Query: 3974 EVD----------VDEVCCSSIPIDGXXXXXXXXXXXXXXIWGE-------VVAGDASGV 4102
            + +          VDE   S    D                  E       V  G A  +
Sbjct: 1320 DHEANENDVPLHQVDENDPSQTAADSDTAGRDTQSNLLHQDTSELNSDQMHVDPGTAEDL 1379

Query: 4103 --DQVGKQSHLE--ERCFKDYLLSGGGFCEDESDE 4195
              D +G + H +  +   K+YL +GGGFC +E ++
Sbjct: 1380 YEDPLGFELHEDQTDSAPKEYLFTGGGFCAEEDEQ 1414


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  898 bits (2320), Expect = 0.0
 Identities = 635/1585 (40%), Positives = 825/1585 (52%), Gaps = 109/1585 (6%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RD++ G+  R  HLLGF RRI KLLFLR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37   QFMKAMRDEK-GEMVRNGHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKGKQV----------ARDGD 331
            + A++KIRKTAEKLLLNHLK  RL+ELA ++      +N KGK+V            +G+
Sbjct: 96   ENAQAKIRKTAEKLLLNHLKAMRLKELAKDLENQRLNNNDKGKKVLSYQTETAGEVSEGN 155

Query: 332  DGAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGGID 511
               +    Q                                       M+    M+G +D
Sbjct: 156  SSVSGTYNQEKLDEMLAASLAAEEDGNFVGDAGISNEEDDDDDEDEEMML--PIMNGKVD 213

Query: 512  PTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRREID 691
            P VLA+LPPSMQLDLLVQMRE+LMAENRQ+YQK+KKAP++FSELQIQ+YLKTVAFRREID
Sbjct: 214  PAVLAALPPSMQLDLLVQMREKLMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREID 273

Query: 692  EVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNA-SKNR 868
            EVQK A GRG+GGVQTSRIASEAN+E+IFSSSFTGDK+ LT+ G+ +NGD  +   ++  
Sbjct: 274  EVQKSAAGRGVGGVQTSRIASEANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECP 333

Query: 869  GSLTSASCSIGRSNSAVGSSSIAKSPKD-FGPGVETYYDDXXXXXXXXXXXXXXXMTRDL 1045
                +   S  +SN+A  + S+A  P   F   VETY D+               MTRDL
Sbjct: 334  PDSPNNVASTSKSNTA--AESVAGEPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDL 391

Query: 1046 QRNLDLMKEYEEEKFGENIGNEVHDTSKVFSGSTFSAKASACSEENQDLIFENTGISSRG 1225
            QRNLDLMKE E+++  E                                  +N GI +  
Sbjct: 392  QRNLDLMKEIEQDRTNE----------------------------------DNNGIVTLN 417

Query: 1226 ATAHGFDEPSVVGNKAAIEVSFVEDDSERK--DTVDELFLHLVSGSSTIKPLTEGTFLXX 1399
             T    +E S+  N A+IE+SF EDD E    +  DELF  LV+G+  I   ++      
Sbjct: 418  KT----NEQSIPDNGASIEISF-EDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNR 472

Query: 1400 XXXXXXXXXXXXXGVVEEN--TITPNERNKQNDSISAEQIHPEDDEVDWEEGVCQTPRVV 1573
                         G++EE   +   N   +   S+  E++  +D EV+WEEG C   + V
Sbjct: 473  RPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVS-DDSEVEWEEGPCDVSKNV 531

Query: 1574 SDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDPNTELTCGGKESIQS 1753
            S    K  N  S G LEEE D+QEAIRRSLED    K+ G    D + +      E +  
Sbjct: 532  SACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGEKAVGESFKDSDIKEY---DEKVHE 588

Query: 1754 MKVSA--KERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTGQTKIDPENHLSS 1927
            +K  A  K+ +      PL+  P  + S C   D + +L            +D  N   S
Sbjct: 589  VKDDAFHKKNDKAEQDFPLENLPEQNGSFCKIVDVVEKL----------DSVDGMNTSQS 638

Query: 1928 HAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLEEGSMDS 2107
                     S L D  +K + V ++ L  +   D G  G +   T   V    E+ S  S
Sbjct: 639  IDASGRQLTSLLEDNPHK-MEVLNNELCEEYQKDVGESGNVGRET-NEVYMIREQLSHAS 696

Query: 2108 FKQGEDETLL-------MEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQDLQDXX 2266
             K  +  TL           ++A +G       +A  +   K         H  +  D  
Sbjct: 697  KKSVDTSTLANSCSGDGSHISDAMLGNMP----DATPADSSKYDSEAAPTWHSNETTDPA 752

Query: 2267 XXXXXXXXXXXALCQEKSVV-NVALDIDKENKQNLAINNAISTTGESSFGCESTIQESFT 2443
                          ++K    N  ++   E ++N+         G S    +  +Q   T
Sbjct: 753  IPPGETCIKGKTAVEQKLAEGNNHVNFFMEKERNM---------GNSVTEDKKNVQFGVT 803

Query: 2444 KEVSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 2623
            ++V E     E+ +L QE  +LGDEQ+KLERNA+ VSSEMFAECQELLQMFGLPYIIAPM
Sbjct: 804  EDVLE-----EMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPM 858

Query: 2624 EAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTR 2803
            EAEAQCAYME+ NLVDGVVTDDSDVFLFGARSVYKNIFD+RKYVETYFMKDIE+ELGL R
Sbjct: 859  EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNR 918

Query: 2804 EKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKTK 2983
            EK+IRMA+LLGSDYTEGVSGIGIVNAIEV+++FPEEDGL KF+EW+ESPDP+ILGK+  +
Sbjct: 919  EKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVE 978

Query: 2984 SCKASNNNADGTGNNVEESVCEGNIS------RQPKDQPDANDGSKIKEIFMDKHRNVSK 3145
            +  +S       G+  ++S  + N+        Q +     +D    K+IFMDKHRNVSK
Sbjct: 979  TGSSSRKRGSKVGSG-DQSHSKNNMDAFDENVSQNEHNESVDDIQSGKQIFMDKHRNVSK 1037

Query: 3146 NWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKADELLVP 3325
            NWHIPSSFPS++VISAY SPQVDQSTE FSWGKPDLF+LRKLC EKFGW NQKADELL+P
Sbjct: 1038 NWHIPSSFPSETVISAYASPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLP 1097

Query: 3326 VLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQELSKSRT 3505
            VLKEYNKHETQLRLEAFYTFNERFAKIRS+RIKKAVKGITG+ +SEL+D+ +QE SK R 
Sbjct: 1098 VLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSK-RG 1156

Query: 3506 KGRLRSSGLKESKLEV---------HSDGTNVRGRKVSKPSRQENTEIKVTQTDGHAALH 3658
            K    S    ++K E+           +G+N   +   K SR+     K   +DG +A  
Sbjct: 1157 KRSKESPSKLDNKQEIPINEIGSTAARNGSNATAKTTPKQSRRRRIR-KPVPSDGESA-E 1214

Query: 3659 TSFQVG-------GNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQE 3817
               Q G       G+ K+G                                         
Sbjct: 1215 PPVQAGQKQCNDTGSSKNG----------------------RGKGRKKGRGVRRGRGRSR 1252

Query: 3818 EAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEGEVDV---- 3985
              E   +E +  SSSD +  ++E     K  D     RRS R RK V YA  ++++    
Sbjct: 1253 IQENPGSEISGTSSSDCNSGNEEEVPAQKL-DGSNEVRRSKRPRKAVNYANDDLEIDDEG 1311

Query: 3986 ----------------------DEVCCSSIPID--GXXXXXXXXXXXXXXIWGE------ 4075
                                  D++ C     D  G              + G+      
Sbjct: 1312 KSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEG 1371

Query: 4076 VVAGDASGVDQVGKQSH---LEERCFKDYLLSGGGFCEDESDELGVGGQHVASPVRD--- 4237
            V+  D + + Q+  +       +   +DYL  GGGFC +E ++          P +    
Sbjct: 1372 VMCMDENEIGQLDSRDDDPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTI 1431

Query: 4238 ----------SVGPLEEQTQISGSLPGHD---------DLNSSCNELNQQPVLQTSSPLE 4360
                      ++ P E  + +  +  G           +LN  C        +  S P  
Sbjct: 1432 YENPDPESELAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDC----PNATIGLSMPEN 1487

Query: 4361 HG--SGEQVPKPGLRAMPSLKRKRK 4429
             G  +G    K  LRAMP L++KR+
Sbjct: 1488 TGDDTGTNTVK-ALRAMPFLRKKRR 1511


>dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1503

 Score =  896 bits (2315), Expect = 0.0
 Identities = 564/1205 (46%), Positives = 727/1205 (60%), Gaps = 51/1205 (4%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF++A+RDD+ GD  R AH+LGFLRRI KLLFLRARPVFVFDGATPALKRRTLAAR R R
Sbjct: 37   QFMRAMRDDK-GDMVRDAHILGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRNR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSK--------SNSKGKQVAR-DGDD 334
            D A++K+RKTAEKLL++HLK  RLEELAA+I+   +K         +S+G++  + DGD 
Sbjct: 96   DAAQAKVRKTAEKLLISHLKASRLEELAAQIKSDRAKHDAKDKQIESSRGEETEKTDGDQ 155

Query: 335  ----------GAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 475
                      GA  P  Q                                          
Sbjct: 156  NQNDDGENSRGAVAPINQEKLDELLAASLAAEDEAGLIGKGEHNPASVPLQEGTGIDEEE 215

Query: 476  ------MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFS 637
                  MI+P T  G IDP VLASLPPS+QLDLLVQMRER+MAENRQ+YQKIKK P+KFS
Sbjct: 216  NDDDEEMIFPMTT-GDIDPAVLASLPPSIQLDLLVQMRERVMAENRQKYQKIKKEPAKFS 274

Query: 638  ELQIQSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTS 817
            ELQIQSYLKTVAFRREI+EV+K A G+ +GG+QTS+IASEAN+EFIFSSSFTGDKQ L  
Sbjct: 275  ELQIQSYLKTVAFRREIEEVRKGAAGKDVGGIQTSKIASEANREFIFSSSFTGDKQTLAQ 334

Query: 818  AGIGRNGDTDHNASKNRGSLTSASCSIGRSNSAVGSSSIAKSPKD-FGPGVETYYDDXXX 994
             G+    +   ++ K++  ++SA      S+S+      +  P   FGP VETY D+   
Sbjct: 335  RGVE---EQIVDSGKSKREISSAIFKSSPSSSSRSIKPQSGEPSTGFGPDVETYRDERGR 391

Query: 995  XXXXXXXXXXXXMTRDLQRNLDLMKEYEEEKF--------GENIGNEVHDTSKVFSGSTF 1150
                        MTRD+QRNLD +KE+E+ K         G     E  D  +    +  
Sbjct: 392  IRVSRVRGMGIRMTRDIQRNLDFIKEHEQAKSMGQANIGKGSTSNEEPPDFPEHLFENDG 451

Query: 1151 SAKASACSEENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTVDE 1330
               +   SE+  + I +N   SS    +    E S  G+K  IE+SF +D    KD  D+
Sbjct: 452  LQSSVGLSEDFAETIGDNHHTSSLVGGSDDISEGSCHGSKETIEISFEDDQIGVKDNDDK 511

Query: 1331 LFLHLVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQ 1510
            LFL+LVSG+S+     +                   G++EE T++     K + S+  + 
Sbjct: 512  LFLNLVSGTSSKLFADDDRLAKNTEESDNSEGIWEEGIIEE-TLSVKVDEKDHQSLPPDN 570

Query: 1511 IHPEDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSS 1690
                DDEV+WEEGVC  P V S S+  ++  +  G +EEEA IQEAI+RSLED  + +  
Sbjct: 571  CCT-DDEVEWEEGVCDVPEVPSISE-YNQCKLPKGDIEEEALIQEAIKRSLEDSGKQEYE 628

Query: 1691 GILPDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYY 1870
              +P+D          +S+QS     K     S+  P  T+  S  S   G + + ++  
Sbjct: 629  NGIPEDLQIS---SEDKSLQSHDDVPK-----SSEAPAKTYCHSEAS--FGNETIKEVRI 678

Query: 1871 PCKKKTGQTKI--DPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNL-KTQSVVDDGSL 2041
              K  +G+  +  DPE   +     R + E     E+N G   ++ +  +  S V D S 
Sbjct: 679  --KDSSGEDGVMHDPEVLEAE----RKENEKQAQLESNDGRACTNTDYPRGSSPVYDVST 732

Query: 2042 GTLQ-----TPTAKSVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSANVNLEANCSSL 2206
             T       +P  +   A +   S+  F +   E ++ + T     L+ N N        
Sbjct: 733  STHTAGPSCSPKVQDNDAIVSAASIHEFPK---EEVIKQNTSNSHKLACNTN-------- 781

Query: 2207 DKAPDTVVTDMHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAI 2386
                     D ++ ++                + Q+  +++  +  D   K+N+   +  
Sbjct: 782  ---------DHYIGEIS--------------MVSQKGPLMDELVADDAIQKENVIQEDMN 818

Query: 2387 STTGESSFGCESTIQESFTKEVSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMF 2566
            +TT E         + S +  +SE+ L++EIS LRQE+ DLG+E++KLE +AESVSSEMF
Sbjct: 819  TTTSE--INSTQLNENSDSHIISENNLEDEISFLRQEQVDLGNERRKLESHAESVSSEMF 876

Query: 2567 AECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDR 2746
            AECQELLQMFGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDR
Sbjct: 877  AECQELLQMFGLPYIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDR 936

Query: 2747 KYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCK 2926
            KYVETY MKDIESELGLTRE+LIRMAMLLGSDYTEG+SGIGIVNAIEVVHAFPEEDGL +
Sbjct: 937  KYVETYLMKDIESELGLTREQLIRMAMLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQQ 996

Query: 2927 FKEWIESPDPSILGKLKTKSC------KASNNNADGTGNNVEESVCEGNISRQPKDQPDA 3088
            F+EWIESPDP+ILGK   +S       K+  N +   GN++E    EG+ + Q      +
Sbjct: 997  FREWIESPDPAILGKFDVESSGSSKRRKSGGNESCEKGNSLEPECVEGSDNNQ-----SS 1051

Query: 3089 NDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRK 3268
            N+   IKE+FM  HRNVSKNWHIPS+FPS++VI+AYISPQVD STE FSWG+PDL LLRK
Sbjct: 1052 NETQHIKEVFMSNHRNVSKNWHIPSTFPSETVINAYISPQVDDSTERFSWGRPDLSLLRK 1111

Query: 3269 LCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITG 3448
            LCWE+FGW+ +KADELL+PVLKEYNKHETQLR+EAFY+FNERFAKIRS+RI+KA+KGITG
Sbjct: 1112 LCWERFGWNKEKADELLLPVLKEYNKHETQLRMEAFYSFNERFAKIRSKRIQKAIKGITG 1171

Query: 3449 TSSSE 3463
             + SE
Sbjct: 1172 KTFSE 1176


>ref|XP_006649592.1| PREDICTED: DNA repair protein UVH3-like [Oryza brachyantha]
          Length = 1478

 Score =  894 bits (2309), Expect = 0.0
 Identities = 637/1577 (40%), Positives = 834/1577 (52%), Gaps = 100/1577 (6%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF++AIRDD+ GD  R AHLLGFLRRI KLLFLRARPVFVFDGATPALKRRTLAAR R R
Sbjct: 37   QFMRAIRDDK-GDMIRDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRHR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSK--------SNSKGKQVAR----- 322
            D A++K+RKTAEKLLL+HLK ++LEELAA+I+   +K         +SK +++ +     
Sbjct: 96   DAAQAKVRKTAEKLLLSHLKARKLEELAAQIKSDRAKHDNKDKQVESSKMEEIEKTNEDQ 155

Query: 323  ----DGDDGAAT--PNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 475
                DG++  AT  P  Q                                          
Sbjct: 156  NKNGDGENSGATVTPIDQEKLDELLAASLAAEEEADLTTKGKQYTASAPLREGADIDEDN 215

Query: 476  ------MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFS 637
                  MI+P T  G IDP VLASLPPSMQLDLLVQMRER+MAENRQ+YQKIKK P+KFS
Sbjct: 216  DEDDEEMIFPMTT-GDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFS 274

Query: 638  ELQIQSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTS 817
            ELQIQSYLKTVAFRR+IDEVQ+CA G+G+GGVQTS+IASEAN+EFIFSSSFTGDKQ L  
Sbjct: 275  ELQIQSYLKTVAFRRDIDEVQRCAAGKGVGGVQTSKIASEANREFIFSSSFTGDKQTLAQ 334

Query: 818  AGIGRNGDTDHNASKN-------RGSLTSASCSIGRSNS-AVGSSSIAKSPKDFGPGVET 973
             G G+    D   SK        + + TS+S S   SNS  +GS         FGP VET
Sbjct: 335  RG-GKEHTVDSIKSKREINPAFFKSNPTSSSGSTKPSNSERLGS---------FGPDVET 384

Query: 974  YYDDXXXXXXXXXXXXXXXMTRDLQRNLDLMKEYEEEKFGENIGNEVHDTSKVFSGSTFS 1153
            Y D+               MTRD+QRNLD +KE+E+      + N  H+ + V       
Sbjct: 385  YRDERGRIRVSRVRAMGIRMTRDIQRNLDFIKEHEQ------VRNRGHNNAVV------- 431

Query: 1154 AKASACSEENQDL---IFENTGISSRGATAHGFDEPSV-------------------VGN 1267
             + SA +E+  D    +FE+ G+ S       FDE +                    VG+
Sbjct: 432  -EGSANNEDPPDFPEHLFESNGLRSSLHLNEDFDETATDNYHTSSLVGQDIISEGTSVGS 490

Query: 1268 KAAIEVSFVEDDSERKDTVDELFLHLVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVV 1447
            K  IE+SFV+D +E  D  +++FLHLVSG+S+    T+  F                 ++
Sbjct: 491  KETIEISFVDDQTEVNDNDEQIFLHLVSGTSSNLFTTDDIF-PKSTEQMDGSACISKELL 549

Query: 1448 EENTITPNERNKQNDSISAEQIHPEDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEE 1627
            E+ T+ P +  +++   S       DDE++WEEG C  P   S ++  ++  +  G LEE
Sbjct: 550  EDETL-PLQIGEKDHQTSLLDDCGTDDEIEWEEGGCDVPGGPSSNE-TNQPKLPKGDLEE 607

Query: 1628 EADIQEAIRRSLEDFERPKSSGILPDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLD 1807
            +A +QEAIRRSLEDFE  +   + P D               ++ S +++ V S     D
Sbjct: 608  DALVQEAIRRSLEDFEGQEPENVTPKD---------------LQASFEDKLVES----YD 648

Query: 1808 THPVSSCSPCIGQDRLGQLYYPCKKKTGQTKIDPENHLSSHAGYRSDGESSLNDETNKGL 1987
              P  + +     D++G       K+    + D  + L    G  ++ ++ L  E N G 
Sbjct: 649  DVPEPASAAVNTADKIG-------KEINSDENDIVHGLLVVDGQENENQTQL--ENNDG- 698

Query: 1988 LVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLEEGSMDSFKQGEDETLLMEPTEAFVGL 2167
             V++++      +   ++ T+ T   KS  +        S  Q     L    T  +   
Sbjct: 699  WVNNNSAYLSDPLPSCNM-TISTAATKSPDS--------SEVQHHSSVLHTTRTPEWSKN 749

Query: 2168 SANVNLEANCSSLDKAPDTVVTDMHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDID 2347
             ++  +  N S  DK+          +  +                 Q ++    A+D  
Sbjct: 750  DSDKVITQNSSITDKSKCKTNNSCIGESSRSPQKDILIDELVVDTAIQNQNANQGAMDFS 809

Query: 2348 KENKQNLAINNAISTTGESSFGCESTIQESFTKEVSESALDEEISLLRQERKDLGDEQKK 2527
                    +N+       S+   E  +          S L +E   L  ER       +K
Sbjct: 810  TSEMYYTKLNDNAGINSVSTANLEEEL----------SILRQEQVYLGNER-------RK 852

Query: 2528 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLF 2707
            LE +AESVSSEMFAECQ+LLQMFGLPYIIAPMEAEAQCAYMEM NLVDGVVTDDSDVFLF
Sbjct: 853  LESHAESVSSEMFAECQDLLQMFGLPYIIAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLF 912

Query: 2708 GARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIE 2887
            GAR+VYKNIFDDRKYVETY MKDIESELGLTRE+LIRMA+LLGSDYTEG+SGIGIVNAIE
Sbjct: 913  GARNVYKNIFDDRKYVETYLMKDIESELGLTREQLIRMALLLGSDYTEGISGIGIVNAIE 972

Query: 2888 VVHAFPEEDGLCKFKEWIESPDPSILGKL------KTKSCKASNNNADGTGNNVEESVCE 3049
            V HAFPEEDGL KF+EW+ESPD ++LGKL       +K  K+  N++DG G+++     E
Sbjct: 973  VAHAFPEEDGLQKFREWVESPDLTLLGKLGMESGSSSKKRKSEGNHSDGKGSSLGPQCIE 1032

Query: 3050 GNISRQPKDQPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTES 3229
            G+      D   +N+  +IKEIFM KHRNVSKNWHIPS+FPS+SVI+AYISPQVD STE 
Sbjct: 1033 GS-----DDNQSSNEIERIKEIFMSKHRNVSKNWHIPSNFPSESVINAYISPQVDDSTEP 1087

Query: 3230 FSWGKPDLFLLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIR 3409
            FSWG+PD  LLRKLCWE+FGWS +KADELL+PVL+EYNKHETQLR+E+FY+FNERFAKIR
Sbjct: 1088 FSWGRPDSGLLRKLCWERFGWSKEKADELLIPVLREYNKHETQLRMESFYSFNERFAKIR 1147

Query: 3410 SQRIKKAVKGITGTSSSEL--MDNHMQELSKSRTKGRLRSSGLKESKLEVHSDGTNVRGR 3583
            S+RIKKA+KGITG S SE   +D      S +       SSG   +K +   DG      
Sbjct: 1148 SKRIKKAIKGITGKSFSETDEVDQDSPSTSNANKNKERSSSGHARAKGQKTKDG------ 1201

Query: 3584 KVSKPSRQENTEIKVTQTDGHAALHTSF-QVGGNGKSGLHADVQXXXXXXXXXXXXXXXX 3760
                P    + + K+T +   A  HT+  +  G  K G                      
Sbjct: 1202 ---GPGNMGSQDHKITNSFADADEHTTHKRTAGKKKIG----------------NPSSRS 1242

Query: 3761 XXXXXXXXXXXXXXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRST 3940
                             QE +E  +       +SDE  H   +     +  +  A RRS 
Sbjct: 1243 RGKGRRRMDDAHVVGGSQEGSEVSNL------ASDEVSH---IRYTNNYETEGLAMRRSN 1293

Query: 3941 RQRKHVLYAEG--EVDVDEVCCSSIP--------------IDGXXXXXXXXXXXXXXIWG 4072
            R+RK V+YAE   E D ++V    I               +DG              +  
Sbjct: 1294 RKRKQVMYAEDGQEADDNDVSMHQIDENQRQGSLNEDMDHMDGHDALSNLLHQDTSELGS 1353

Query: 4073 EVVAGDASGVDQVGKQSHLEE-----RCFKDYLLSGGGFCEDESDE----LGVGGQHVAS 4225
            + +    SG+++   +  L E        KDYL +GGGFC +E DE    +   G  +  
Sbjct: 1354 DQMHSGPSGMNEDPSRFELREDSPMDSAPKDYLFTGGGFCMEEGDEQDMAVDQSGGEMEH 1413

Query: 4226 PVRDSVGPLEEQT--------QISGSLPGHDDLNSSCNELNQQPVLQTSSPLEHGSGEQV 4381
              RD+   ++E +          +G   G+ D      E+   P  Q  +    GSG  +
Sbjct: 1414 GTRDACEGIDEVSGGGRTASYSTTGEFTGNAD-----TEVPGAPSSQGRN-ANRGSG-TM 1466

Query: 4382 PKPGLRAMPSLKRKRKT 4432
            PKP      + KR+RK+
Sbjct: 1467 PKP-----TTTKRRRKS 1478


>ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
            distachyon]
          Length = 1460

 Score =  872 bits (2253), Expect = 0.0
 Identities = 613/1554 (39%), Positives = 832/1554 (53%), Gaps = 78/1554 (5%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLA------ 163
            QF++A+RDD+ GD  R AH+LGFLRRI KLLFLRARPVFVFDGATPALKRRTLA      
Sbjct: 37   QFMRAMRDDK-GDMVRDAHILGFLRRICKLLFLRARPVFVFDGATPALKRRTLASRRRHR 95

Query: 164  --ARSRLRDQARSKIRKTAEKLLLNHLKTKRLEELA---AEIRRTDSKSNSKGKQVARD- 325
              A++++R  A   +    +   L  L  K   + A   A+ ++ +S +  + ++   D 
Sbjct: 96   DAAQAKVRKTAEKLLISHLKASRLEELAAKIKSDRAKHDAKGKQIESNTGEETEKTYGDP 155

Query: 326  --GDDGA------ATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 475
               DDG       A  NQ+                                         
Sbjct: 156  NRNDDGGNSRGTIAPINQEKLDELLAASLAAEDEADLTDKGGHNSASVPLQQGTGIDEDE 215

Query: 476  ------MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFS 637
                  MI+P T  G IDP VLASLPPSMQLDLLVQMRER+MAENRQ+YQKIKK P+KFS
Sbjct: 216  NDDDEEMIFPVTT-GDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFS 274

Query: 638  ELQIQSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTS 817
            ELQIQSYLKTVAFRREI+EVQ+ A G+ +GG+QTS+IASEAN+EFIFSSSFTGDKQ L  
Sbjct: 275  ELQIQSYLKTVAFRREIEEVQRGAAGKDVGGIQTSKIASEANREFIFSSSFTGDKQTLAQ 334

Query: 818  AGIGRNGDTDHNASKNRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXX 997
             G+G + + D+  SK   S T    S   S+ ++   + ++  +DFGP VETY D+    
Sbjct: 335  RGVGEH-NVDNVKSKREISSTVFKSSPSSSSRSINPHN-SEPLRDFGPDVETYCDERGRI 392

Query: 998  XXXXXXXXXXXMTRDLQRNLDLMKEYEEEKFG--ENIGNEVHDTSK-------VFSGSTF 1150
                       MTRD+QRNLD +KE+E+ K     ++GN      +       +F     
Sbjct: 393  RVSRVRAMGIRMTRDIQRNLDFIKEHEQAKSTGQTDVGNGSTSNEEPPNFPEHLFENDGL 452

Query: 1151 SAKASACSEENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTVDE 1330
             +  S  SE+  D+  +N   SS    + G  E S  G+K  IE+SFV+D     D  D+
Sbjct: 453  QSSVSF-SEDFADITGDNHHTSSLIGGSDGISEGSCHGSKGTIEISFVDDQIGVSDNDDK 511

Query: 1331 LFLHLVSG-SSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAE 1507
            LFLHLVSG SS I    +                   GV+EE T++     K   S   +
Sbjct: 512  LFLHLVSGTSSNIFAAADRFAKNTEESDDNSEGIWEEGVIEE-TLSMKVDEKDRQSTPPD 570

Query: 1508 QIHPEDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKS 1687
              +  DDEV+WE+G C  P V S S+  ++  ++ G +EEEA IQEAI+RSLED  + ++
Sbjct: 571  NCY-NDDEVEWEDGGCDVPGVPSSSE-YNQCKLTKGDIEEEALIQEAIKRSLEDSGKQET 628

Query: 1688 SGILPDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVS-SCS---PCIGQDRL 1855
               +P+D               +++S +++++ S  +P  T     SCS       ++ +
Sbjct: 629  ENGIPED---------------LQMSVEDKSLQSYVVPKPTEASGISCSLSKAVAAEEII 673

Query: 1856 GQLYYPCKKKTGQTKIDPENHLSSHAGY--RSDGESSLNDETNKGLLVSS-------HNL 2008
             ++        G    DP+   + +      +D ++  N   + G + +S       H+ 
Sbjct: 674  KEIGIVNNSGEGGAVHDPDGQENENQAQLESNDEQAGTNRSYSLGSISTSTVAARPSHSS 733

Query: 2009 KTQSVVDDGSLGTLQTPTAKSVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSANVNLE 2188
            K Q   +D     ++TP                + +GE   ++ + T       +N N +
Sbjct: 734  KVQD--NDAIADAIRTP---------------EWPKGEGHEVIEKNTSNSHKSKSNTN-D 775

Query: 2189 ANCSSLDKAPDTVVTDMHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNL 2368
             +     K+P                            L  +K V + A++ + + ++++
Sbjct: 776  HSIGDTSKSPQK-------------------------ELLMDKLVADTAMEKENDVQEDV 810

Query: 2369 AINNAISTTGESSFGCESTIQESFTKEVSESALDEEISLLRQERKDLGDEQKKLERNAES 2548
             I     TT E ++   S   +S    +S S L+EEIS LRQE+ +LG+E++KLE +AES
Sbjct: 811  NI-----TTSEINYAKLSENYDSHV--ISASNLEEEISFLRQEQVNLGNERRKLESHAES 863

Query: 2549 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYK 2728
            VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSDVFLFGAR+VYK
Sbjct: 864  VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYK 923

Query: 2729 NIFDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPE 2908
            NIFDDRKYVETYFMKDIESELGLTR++LIRMA+LLGSDYTEG+SGIGIVNAIEVVHAF E
Sbjct: 924  NIFDDRKYVETYFMKDIESELGLTRDQLIRMALLLGSDYTEGISGIGIVNAIEVVHAFSE 983

Query: 2909 EDGLCKFKEWIESPDPSILGKLKTKSC------KASNNNADGTGNNVEESVCEGNISRQP 3070
            EDGL KF+EWIESPDP+ILGKL+ ++       K+  N +   GN++E    EG+  +  
Sbjct: 984  EDGLQKFREWIESPDPAILGKLEKETSDGSTRRKSGGNESSEKGNSLEPECVEGSDGKH- 1042

Query: 3071 KDQPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPD 3250
                 +N+   IK+IFM+KHRNVSKNWHIPS+FPS++VISAYISPQVD STE FSWG+PD
Sbjct: 1043 ----SSNETEHIKKIFMNKHRNVSKNWHIPSTFPSETVISAYISPQVDDSTERFSWGRPD 1098

Query: 3251 LFLLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKA 3430
            L LLRKLCWE+FGW+ +KADELL+PVL+EYNKHETQLR+EAFY+FNERFAKIRS+RIKKA
Sbjct: 1099 LSLLRKLCWERFGWNKEKADELLLPVLREYNKHETQLRMEAFYSFNERFAKIRSKRIKKA 1158

Query: 3431 VKGITGTSSSEL--MDNHMQELSKSRTKGRLRSSGLKESKLEVHSD-GTNVRGRKVSKPS 3601
            +KGITG + SE   +D+     S++  K     S   + + + +S+ G N          
Sbjct: 1159 IKGITGKTFSETDELDHDSPSTSEAPKKKEAGPSSHAKPRGKRNSNAGPNSFAAADELAK 1218

Query: 3602 RQENTEIKVTQTDGHAALHTSFQVGGNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXX 3781
               N   K T +        S +  G G+   +A  +                       
Sbjct: 1219 EHSNASKKKTAS-------PSGRSRGRGRKRTNAGHE----------------------- 1248

Query: 3782 XXXXXXXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVL 3961
                      QE++E  ++ F    SSD   H    G    +  +  A RRS R+RK V 
Sbjct: 1249 ------TAVSQEDSEVKTSTF----SSDVDTHKSHAG---NYKSEGTALRRSNRKRKQVT 1295

Query: 3962 YAEG------------EVDVDEVCCSSIPIDGXXXXXXXXXXXXXXIWGEVVAGD-ASGV 4102
            Y E             + D ++   ++  I G              +  + +  D  + V
Sbjct: 1296 YMEDGHEADDNDTPVYQADENDPSPAASDIAGRDTQSNMFHQDTSELNRDQIHADPGTAV 1355

Query: 4103 DQVGKQSHLEER---CFKDYLLSGGGFCEDESDELGVGGQHVASPVRDSVGPLEEQTQIS 4273
            D        E++     K+YL +GGGFC +E +E    G    + ++D  G  +    I 
Sbjct: 1356 DMSEDFEFCEDQTDSAPKEYLFTGGGFCMEEDEEQDAPGDRPGAEIKD--GTSDAFEDIG 1413

Query: 4274 GSLPGHDDLNSS--CNELNQQPVLQTSSPLEHGSGEQVPKPGLRAMPSLKRKRK 4429
            G      DL+++  C E         S+     S  +    GL      KR+RK
Sbjct: 1414 GVSDSGIDLSTTGECAE-------NASTESRGASSSKRGNVGLGLPTLTKRRRK 1460


>ref|XP_006357146.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Solanum
            tuberosum]
          Length = 1517

 Score =  853 bits (2204), Expect = 0.0
 Identities = 595/1521 (39%), Positives = 805/1521 (52%), Gaps = 72/1521 (4%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RD++ G+  R AH+LGF RRI KLL+LR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37   QFMKAMRDEK-GEMVRNAHILGFFRRICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKG-----------KQVARDG 328
            + A++KIRKTAEKLLLNHLK  RL+EL+ ++      +++KG           + +A   
Sbjct: 96   ENAQAKIRKTAEKLLLNHLKAMRLKELSVDLENQRKLNDAKGKKVITEATGTMENMAEGN 155

Query: 329  DDGAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MIYPTTMDG 502
              GA   +++                                         MI P T  G
Sbjct: 156  GLGAENYDKEALDEMLAASIQAEEDWNFADDASTSCAAAPAENDNTDEDEEMILPATQ-G 214

Query: 503  GIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRR 682
             +DP+VLA+LPPSMQLDLL QMRERLMAENRQ+YQK+KKAP KFSELQIQSYLKTVAFRR
Sbjct: 215  KVDPSVLAALPPSMQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRR 274

Query: 683  EIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNASK 862
            EI EVQK A GRG+GGV+TSRIASEAN+EFIFSSSFTGDK  L SAG  +          
Sbjct: 275  EIGEVQKAAAGRGIGGVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQISKKSSEVQT 334

Query: 863  NRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXXXXXXXXXXXMTRD 1042
                  +A  +  R +S+V  S +++    F   VETY D+               MTRD
Sbjct: 335  ENNLANAAGDASTRKSSSVLESIVSEPESAFNDDVETYLDERGHLRVSRLRAMGVRMTRD 394

Query: 1043 LQRNLDLMKEYEEEKFGEN---------IGNEVHDTSKVFSGSTFSAKASACSEENQDLI 1195
            LQRNLDLMKE EEE    N            +VH    V S +     +S   ++ +D +
Sbjct: 395  LQRNLDLMKEIEEESVSRNKDFSDVPTVSDTDVHTPGNV-SDTILHLNSSNPDDDGKDCL 453

Query: 1196 FENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERK--DTVDELFLHLVSGSSTIK 1369
               T             E S + +   I++SF ED+ E    +  D++F  LV+G   ++
Sbjct: 454  NNKT-------------EESELRSGTTIQISF-EDNFEHDCANDDDDIFASLVAGDPGME 499

Query: 1370 PLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHPEDDE--VDWE 1543
               + +                 GV+EE     +  N Q +  +  +I   DDE  V+WE
Sbjct: 500  FPMDHSPSKKQSLDSASDVEWEEGVIEEKGDLLSS-NSQGEGQAPLEIDGMDDEAEVEWE 558

Query: 1544 EG---VCQTPRVVS-DSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDP 1711
            EG   +C+ P ++  DS+  ++     G LEEEA+ QEA++RSLED    +    +    
Sbjct: 559  EGCLDICEEPPLLPLDSRSAYK-----GALEEEANYQEAVKRSLEDM---RDHRYIDKSH 610

Query: 1712 NTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTG 1891
              E++   +E+IQ         +VG  +     H +        + +   L+    +   
Sbjct: 611  EKEMS---EEAIQITAQGISIESVGQENYCPKVHKILQQKDLPSEIQTADLHDTVHE--- 664

Query: 1892 QTKIDPENHLSSHAGYRSDGESSL-NDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAK 2068
                   N L +H G +    S   N +  K       NL+ +      +   L      
Sbjct: 665  MDIAGSNNSLGTHLGEQFQANSGYGNMQIEKATSHPDRNLQIEKATSHTNRN-LHCDIHM 723

Query: 2069 SVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSAN--VNLEANCSSLDKAPDTVVTDMH 2242
                 L+   +D  K+   +T         VG+S+N   N  ++ + ++++      +  
Sbjct: 724  EPTIPLDGSEVDMIKKTIADTT--------VGVSSNNNTNSASDVTYIEQSTFNESMNAR 775

Query: 2243 LQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFGCES 2422
              D Q                   K+        D  + QNL    A     +  F    
Sbjct: 776  TTDAQQYESGAAAHHYTQETTELTKAFTE-GFTTDINSAQNLDEEGACD---DPLFERID 831

Query: 2423 TIQESFTKE---VSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQM 2593
             +  + TKE   V  ++L+EE+ +L ++R+ LGDEQ+KLERNA+SVSSEMFAECQELLQM
Sbjct: 832  NLDSASTKEDQKVMMASLEEEMHVLDEQREKLGDEQRKLERNADSVSSEMFAECQELLQM 891

Query: 2594 FGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMK 2773
            FGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFMK
Sbjct: 892  FGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMK 951

Query: 2774 DIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPD 2953
            D+E+ELGL REK+IRMA+LLGSDYTEGVSG+GIVNAIEVV+AFPEEDGL KF+EW+ESPD
Sbjct: 952  DVENELGLDREKIIRMALLLGSDYTEGVSGVGIVNAIEVVNAFPEEDGLQKFREWVESPD 1011

Query: 2954 PSILGKLKTKSCKASNNNADGTGN---NVEESVCEGNISRQPKDQPDANDGSKIKEIFMD 3124
            PSILG L  ++  +S       G+   +   S  EGN + + +         K+++IFM+
Sbjct: 1012 PSILGGLDAQTGSSSRKRGCKGGDPDMSCSTSNLEGNAASEDR-------AEKLRQIFMN 1064

Query: 3125 KHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQK 3304
            KHRN+SKNWHIPSSFPS++VISAY SP+VD+STE F+WGKPD+ +LRK+CWEKFGWS+QK
Sbjct: 1065 KHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQK 1124

Query: 3305 ADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQ 3484
            ADELLVPVLKEYNKHETQLRLEAFY+FNERFAKIRS+RI KAVK +T   SS+LMD   Q
Sbjct: 1125 ADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKYMTVNKSSDLMDGSAQ 1184

Query: 3485 ELSKSRTKGRLRSSGLKESKLEVHSDG----------TNVRGRKVSKPSRQENTEIKVTQ 3634
            +   S  K  ++S+ + E K+E    G          T  + R V K SR+    +  T+
Sbjct: 1185 DAPGSCKKRVVKSNDMNEEKMEDPPRGLESAGADYEETTTKRRSVGKQSRKRKGGLLQTE 1244

Query: 3635 ---------TDGHAALHTSFQVGGNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXX 3787
                     +  + +  +S  +GG  ++                                
Sbjct: 1245 HLEPPEGAGSKRNTSKKSSGSIGGRKETA------------------------------- 1273

Query: 3788 XXXXXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYA 3967
                    ++ ++  S+  ++ SS  E     E    ++  +K   +RRS R RK V+Y+
Sbjct: 1274 -----RSVRKASKKSSSRSSKTSSEGEKDSDIEQQSQIEKLEKPNQARRSQRHRKIVIYS 1328

Query: 3968 E---GEVDVDEVCCSSIPIDGXXXXXXXXXXXXXXIWGEVVAGDASGVDQVGK-QSHLEE 4135
            E    E D D+   ++  ++                  E    D+SG +     Q   +E
Sbjct: 1329 EKRDDEFDKDDGDSTTEKLERRESGADVDI-------AERYPADSSGAEMESTVQPSFDE 1381

Query: 4136 R--------CFKDYLLSGGGFCEDESDELGVGGQHVASPVRDSVGPLEEQTQI--SGSLP 4285
                       K+YL  GGGFC +E+D       + +SP+        E + I  S  L 
Sbjct: 1382 TSDPIPGDLLSKEYLKMGGGFCLEENDGDMEHEINASSPILS-----VECSDIYNSSQLF 1436

Query: 4286 GHDDLNSSCNELNQQPVLQTS 4348
            G  +  ++ N+L   P  +TS
Sbjct: 1437 GDGNSGNASNQLVSSPSRKTS 1457


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  853 bits (2203), Expect = 0.0
 Identities = 612/1579 (38%), Positives = 805/1579 (50%), Gaps = 103/1579 (6%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RD++ G+  R  HLLGF RRI KLLFLR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37   QFMKAMRDEK-GEMVRNGHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKGKQV----------ARDGD 331
            + A++KIRKTAEKLLLNHLK  RL+ELA ++      +N KGK+V            +G+
Sbjct: 96   ENAQAKIRKTAEKLLLNHLKAMRLKELAKDLENQRLNNNDKGKKVLSYQTETAGEVSEGN 155

Query: 332  DGAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGGID 511
               +    Q                                       M+    M+G +D
Sbjct: 156  SSVSGTYNQEKLDEMLAASLAAEEDGNFVGDAGISNEEDDDDDEDEEMML--PIMNGKVD 213

Query: 512  PTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRREID 691
            P VLA+LPPSMQLDLLVQMRE+LMAENRQ+YQK+KKAP++FSELQIQ+YLKTVAFRREID
Sbjct: 214  PAVLAALPPSMQLDLLVQMREKLMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREID 273

Query: 692  EVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNA-SKNR 868
            EVQK A GRG+GGVQTSRIASEAN+E+IFSSSFTGDK+ LT+ G+ +NGD  +   ++  
Sbjct: 274  EVQKSAAGRGVGGVQTSRIASEANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECP 333

Query: 869  GSLTSASCSIGRSNSAVGSSSIAKSPKD-FGPGVETYYDDXXXXXXXXXXXXXXXMTRDL 1045
                +   S  +SN+A  + S+A  P   F   VETY D+               MTRDL
Sbjct: 334  PDSPNNVASTSKSNTA--AESVAGEPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDL 391

Query: 1046 QRNLDLMKEYEEEKFGENIGNEVHDTSKVFSGSTFSAKASACSEENQDLIFENTGISSRG 1225
            QRNLDLMKE E+++  E                                  +N GI +  
Sbjct: 392  QRNLDLMKEIEQDRTNE----------------------------------DNNGIVTLN 417

Query: 1226 ATAHGFDEPSVVGNKAAIEVSFVEDDSERK--DTVDELFLHLVSGSSTIKPLTEGTFLXX 1399
             T    +E S+  N A+IE+SF EDD E    +  DELF  LV+G+  I   ++      
Sbjct: 418  KT----NEQSIPDNGASIEISF-EDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNR 472

Query: 1400 XXXXXXXXXXXXXGVVEEN--TITPNERNKQNDSISAEQIHPEDDEVDWEEGVCQTPRVV 1573
                         G++EE   +   N   +   S+  E++  +D EV+WEEG C      
Sbjct: 473  RPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVS-DDSEVEWEEGPC------ 525

Query: 1574 SDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDPNTELTCGGKESIQS 1753
                                D+ + +      F  P S G L ++  T+L    + S++ 
Sbjct: 526  --------------------DVSKNVSACPSKFGNPASKGRLEEE--TDLQEAIRRSLED 563

Query: 1754 MKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTGQTKIDPENHLSSHA 1933
            +     E+ VG +    D                        K+  + K+D  + +++  
Sbjct: 564  L---GGEKAVGESFKDSDI-----------------------KEYDEKKLDSVDGMNTSQ 597

Query: 1934 GYRSDGE--SSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLEEGSMDS 2107
               + G   +SL ++    + V ++ L  +   D G  G +   T   V    E+ S  S
Sbjct: 598  SIDASGRQLTSLLEDNPHKMEVLNNELCEEYQKDVGESGNVGRET-NEVYMIREQLSHAS 656

Query: 2108 FKQGEDETLL-------MEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQDLQDXX 2266
             K  +  TL           ++A +G       +A  +   K         H  +  D  
Sbjct: 657  KKSVDTSTLANSCSGDGSHISDAMLGNMP----DATPADSSKYDSEAAPTWHSNETTDPA 712

Query: 2267 XXXXXXXXXXXALCQEKSVV-NVALDIDKENKQNLAINNAISTTGESSFGCESTIQESFT 2443
                          ++K    N  ++   E ++N+         G S    +  +Q   T
Sbjct: 713  IPPGETCIKGKTAVEQKLAEGNNHVNFFMEKERNM---------GNSVTEDKKNVQFGVT 763

Query: 2444 KEVSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 2623
            ++V E     E+ +L QE  +LGDEQ+KLERNA+ VSSEMFAECQELLQMFGLPYIIAPM
Sbjct: 764  EDVLE-----EMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPM 818

Query: 2624 EAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTR 2803
            EAEAQCAYME+ NLVDGVVTDDSDVFLFGARSVYKNIFD+RKYVETYFMKDIE+ELGL R
Sbjct: 819  EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNR 878

Query: 2804 EKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKTK 2983
            EK+IRMA+LLGSDYTEGVSGIGIVNAIEV+++FPEEDGL KF+EW+ESPDP+ILGK+  +
Sbjct: 879  EKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVE 938

Query: 2984 SCKASNNNADGTGNNVEESVCEGNISRQPKDQPDANDGSKIKEIFMDKHRNVSKNWHIPS 3163
            +  +S       G+   ESV               +D    K+IFMDKHRNVSKNWHIPS
Sbjct: 939  TGSSSRKR----GSKHNESV---------------DDIQSGKQIFMDKHRNVSKNWHIPS 979

Query: 3164 SFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKADELLVPVLKEYN 3343
            SFPS++VISAY SPQVDQSTE FSWGKPDLF+LRKLC EKFGW NQKADELL+PVLKEYN
Sbjct: 980  SFPSETVISAYASPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYN 1039

Query: 3344 KHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQELSKSRTKGRLRS 3523
            KHETQLRLEAFYTFNERFAKIRS+RIKKAVKGITG+ +SEL+D+ +QE SK R K    S
Sbjct: 1040 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSK-RGKRSKES 1098

Query: 3524 SGLKESKLEV---------HSDGTNVRGRKVSKPSRQENTEIKVTQTDGHAALHTSFQVG 3676
                ++K E+           +G+N   +   K SR+     K   +DG +A     Q G
Sbjct: 1099 PSKLDNKQEIPINEIGSTAARNGSNATAKTTPKQSRRRRIR-KPVPSDGESA-EPPVQAG 1156

Query: 3677 -------GNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEEAEFDS 3835
                   G+ K+G                                           E   
Sbjct: 1157 QKQCNDTGSSKNG----------------------RGKGRKKGRGVRRGRGRSRIQENPG 1194

Query: 3836 TEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEGEVDV---------- 3985
            +E +  SSSD +  ++E     K  D     RRS R RK V YA  ++++          
Sbjct: 1195 SEISGTSSSDCNSGNEEEVPAQKL-DGSNEVRRSKRPRKAVNYANDDLEIDDEGKSLDQG 1253

Query: 3986 ----------------DEVCCSSIPID--GXXXXXXXXXXXXXXIWGE------VVAGDA 4093
                            D++ C     D  G              + G+      V+  D 
Sbjct: 1254 NQKCTNEEAVELEPSRDQIICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEGVMCMDE 1313

Query: 4094 SGVDQVGKQSH---LEERCFKDYLLSGGGFCEDESDELGVGGQHVASPVRD--------- 4237
            + + Q+  +       +   +DYL  GGGFC +E ++          P +          
Sbjct: 1314 NEIGQLDSRDDDPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPAKADTIYENPDP 1373

Query: 4238 ----SVGPLEEQTQISGSLPGHD---------DLNSSCNELNQQPVLQTSSPLEHG--SG 4372
                ++ P E  + +  +  G           +LN  C        +  S P   G  +G
Sbjct: 1374 ESELAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDC----PNATIGLSMPENTGDDTG 1429

Query: 4373 EQVPKPGLRAMPSLKRKRK 4429
                K  LRAMP L++KR+
Sbjct: 1430 TNTVK-ALRAMPFLRKKRR 1447


>ref|XP_006357145.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Solanum
            tuberosum]
          Length = 1545

 Score =  847 bits (2187), Expect = 0.0
 Identities = 546/1260 (43%), Positives = 716/1260 (56%), Gaps = 49/1260 (3%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RD++ G+  R AH+LGF RRI KLL+LR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37   QFMKAMRDEK-GEMVRNAHILGFFRRICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKG-----------KQVARDG 328
            + A++KIRKTAEKLLLNHLK  RL+EL+ ++      +++KG           + +A   
Sbjct: 96   ENAQAKIRKTAEKLLLNHLKAMRLKELSVDLENQRKLNDAKGKKVITEATGTMENMAEGN 155

Query: 329  DDGAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MIYPTTMDG 502
              GA   +++                                         MI P T  G
Sbjct: 156  GLGAENYDKEALDEMLAASIQAEEDWNFADDASTSCAAAPAENDNTDEDEEMILPATQ-G 214

Query: 503  GIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRR 682
             +DP+VLA+LPPSMQLDLL QMRERLMAENRQ+YQK+KKAP KFSELQIQSYLKTVAFRR
Sbjct: 215  KVDPSVLAALPPSMQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRR 274

Query: 683  EIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNASK 862
            EI EVQK A GRG+GGV+TSRIASEAN+EFIFSSSFTGDK  L SAG  +          
Sbjct: 275  EIGEVQKAAAGRGIGGVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQISKKSSEVQT 334

Query: 863  NRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXXXXXXXXXXXMTRD 1042
                  +A  +  R +S+V  S +++    F   VETY D+               MTRD
Sbjct: 335  ENNLANAAGDASTRKSSSVLESIVSEPESAFNDDVETYLDERGHLRVSRLRAMGVRMTRD 394

Query: 1043 LQRNLDLMKEYEEEKFGEN---------IGNEVHDTSKVFSGSTFSAKASACSEENQDLI 1195
            LQRNLDLMKE EEE    N            +VH    V S +     +S   ++ +D +
Sbjct: 395  LQRNLDLMKEIEEESVSRNKDFSDVPTVSDTDVHTPGNV-SDTILHLNSSNPDDDGKDCL 453

Query: 1196 FENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERK--DTVDELFLHLVSGSSTIK 1369
               T             E S + +   I++SF ED+ E    +  D++F  LV+G   ++
Sbjct: 454  NNKT-------------EESELRSGTTIQISF-EDNFEHDCANDDDDIFASLVAGDPGME 499

Query: 1370 PLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHPEDDE--VDWE 1543
               + +                 GV+EE     +  N Q +  +  +I   DDE  V+WE
Sbjct: 500  FPMDHSPSKKQSLDSASDVEWEEGVIEEKGDLLSS-NSQGEGQAPLEIDGMDDEAEVEWE 558

Query: 1544 EG---VCQTPRVVS-DSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDP 1711
            EG   +C+ P ++  DS+  ++     G LEEEA+ QEA++RSLED    +    +    
Sbjct: 559  EGCLDICEEPPLLPLDSRSAYK-----GALEEEANYQEAVKRSLEDM---RDHRYIDKSH 610

Query: 1712 NTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTG 1891
              E++   +E+IQ         +VG  +     H +        + +   L+    +   
Sbjct: 611  EKEMS---EEAIQITAQGISIESVGQENYCPKVHKILQQKDLPSEIQTADLHDTVHE--- 664

Query: 1892 QTKIDPENHLSSHAGYRSDGESSL-NDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAK 2068
                   N L +H G +    S   N +  K       NL+ +      +   L      
Sbjct: 665  MDIAGSNNSLGTHLGEQFQANSGYGNMQIEKATSHPDRNLQIEKATSHTNRN-LHCDIHM 723

Query: 2069 SVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSAN--VNLEANCSSLDKAPDTVVTDMH 2242
                 L+   +D  K+   +T         VG+S+N   N  ++ + ++++      +  
Sbjct: 724  EPTIPLDGSEVDMIKKTIADTT--------VGVSSNNNTNSASDVTYIEQSTFNESMNAR 775

Query: 2243 LQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFGCES 2422
              D Q                   K+        D  + QNL    A     +  F    
Sbjct: 776  TTDAQQYESGAAAHHYTQETTELTKAFTE-GFTTDINSAQNLDEEGACD---DPLFERID 831

Query: 2423 TIQESFTKE---VSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQM 2593
             +  + TKE   V  ++L+EE+ +L ++R+ LGDEQ+KLERNA+SVSSEMFAECQELLQM
Sbjct: 832  NLDSASTKEDQKVMMASLEEEMHVLDEQREKLGDEQRKLERNADSVSSEMFAECQELLQM 891

Query: 2594 FGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMK 2773
            FGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFMK
Sbjct: 892  FGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMK 951

Query: 2774 DIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPD 2953
            D+E+ELGL REK+IRMA+LLGSDYTEGVSG+GIVNAIEVV+AFPEEDGL KF+EW+ESPD
Sbjct: 952  DVENELGLDREKIIRMALLLGSDYTEGVSGVGIVNAIEVVNAFPEEDGLQKFREWVESPD 1011

Query: 2954 PSILGKLKTKSCKASNNNADGTGN---NVEESVCEGNISRQPKDQPDANDGSKIKEIFMD 3124
            PSILG L  ++  +S       G+   +   S  EGN + + +         K+++IFM+
Sbjct: 1012 PSILGGLDAQTGSSSRKRGCKGGDPDMSCSTSNLEGNAASEDR-------AEKLRQIFMN 1064

Query: 3125 KHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQK 3304
            KHRN+SKNWHIPSSFPS++VISAY SP+VD+STE F+WGKPD+ +LRK+CWEKFGWS+QK
Sbjct: 1065 KHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQK 1124

Query: 3305 ADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQ 3484
            ADELLVPVLKEYNKHETQLRLEAFY+FNERFAKIRS+RI KAVK +T   SS+LMD   Q
Sbjct: 1125 ADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKYMTVNKSSDLMDGSAQ 1184

Query: 3485 ELSKSRTKGRLRSSGLKESKLEVHSDG----------TNVRGRKVSKPSRQENTEIKVTQ 3634
            +   S  K  ++S+ + E K+E    G          T  + R V K SR+    +  T+
Sbjct: 1185 DAPGSCKKRVVKSNDMNEEKMEDPPRGLESAGADYEETTTKRRSVGKQSRKRKGGLLQTE 1244


>ref|XP_004985285.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Setaria italica]
          Length = 1276

 Score =  840 bits (2170), Expect = 0.0
 Identities = 563/1377 (40%), Positives = 736/1377 (53%), Gaps = 58/1377 (4%)
 Frame = +2

Query: 476  MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQS 655
            MI P T  G IDP VLASLPPSMQLDLLVQMRER+MAENRQ+YQ IKK P+KFSELQIQS
Sbjct: 1    MIIPMTT-GDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQTIKKEPAKFSELQIQS 59

Query: 656  YLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRN 835
            YLKTVAFRREID+VQKC+ G+G+GGVQTS+IASEAN+EFIFS+SFTGDKQ LT  G    
Sbjct: 60   YLKTVAFRREIDQVQKCSAGKGVGGVQTSKIASEANREFIFSTSFTGDKQMLTQRG--EK 117

Query: 836  GDTDHNASKNRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXXXXXX 1015
                 NA   R   ++   S   S+S     S +K  ++FGP VETY D+          
Sbjct: 118  EQIVDNAQSKREINSAVFRSNPTSSSRTTEPSTSKHLRNFGPDVETYRDERGRIRVSRVR 177

Query: 1016 XXXXXMTRDLQRNLDLMKEYEEEKF--------GENIGNEVHDTSKVFSGSTFSAKASAC 1171
                 MTRD+QRNLD +KE E+ K         G  +  E  D  +    S     + + 
Sbjct: 178  AMGIRMTRDIQRNLDFIKENEQVKSRVHTNVHKGSTVSEEPPDFPEHLFESNKLQSSLSL 237

Query: 1172 SEENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTVDELFLHLVS 1351
             E+  +   +N   SS    ++   E S  GNK  +E+SF++D +E KD  D++FLHL S
Sbjct: 238  DEDFLETAEDNHQTSSLVRGSNNISESSCYGNKETMEISFMDDQTEVKDNYDDIFLHLAS 297

Query: 1352 GSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHPEDDE 1531
            G+++                         GV+E  T+      K N+S      +  DDE
Sbjct: 298  GTASDLFADNDCLAKNMEEPEGSECIWEEGVIEGETLPIKLDEKGNNSAPE---NCSDDE 354

Query: 1532 VDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDP 1711
            V+WEEG    P V S S+    N +  G LEEEA +QEAIRRSLEDF++  S  +  +D 
Sbjct: 355  VEWEEGDSLVPGVASSSEHNTYNVLK-GDLEEEALLQEAIRRSLEDFDKQASENVSTED- 412

Query: 1712 NTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTG 1891
                          M+ S ++R +  +    D  P  S +P                   
Sbjct: 413  --------------MQASVEDRPLQFS----DDVPKISEAPV------------------ 436

Query: 1892 QTKIDPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKS 2071
                      SSH+G      ++L  ETN+      ++ +   +   G +G  +      
Sbjct: 437  --------ETSSHSG------AALVKETNEKSRTEINSDENDMIHGTGQIGIYRQKNEIQ 482

Query: 2072 VQACLEEGSMDSFKQGEDETL-LMEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQ 2248
             Q    +G +D  +    E L L   + + +    + + +ANC ++     T + +MH+ 
Sbjct: 483  PQLVNNDGQVDMHRAHLLEPLPLCSTSTSNLAEKTSDSSKANCDNV-MISRTEIPEMHVD 541

Query: 2249 DLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFG----- 2413
            D +D                Q+ +++   L   K  +++L ++  ++ T E         
Sbjct: 542  D-RDKNMDQNSMNPNQTKCSQDVAIIGETL---KSPQKDLLVDEPVADTTEPKENDTEGD 597

Query: 2414 -CESTIQESFTKE--------VSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMF 2566
               ST + ++T+         +S + LDEE+S LRQE+ DLG E++KLE +AESVSSEMF
Sbjct: 598  LMVSTSEINYTQVGDNDDNHGISATYLDEELSRLRQEQVDLGHERRKLESHAESVSSEMF 657

Query: 2567 AECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDR 2746
             ECQELLQMFGLPYIIAPMEAEAQCAYMEM  LVDGVVTDDSDVFLFGAR+VYKNIFDDR
Sbjct: 658  TECQELLQMFGLPYIIAPMEAEAQCAYMEMSKLVDGVVTDDSDVFLFGARNVYKNIFDDR 717

Query: 2747 KYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCK 2926
            KYVETYFMKDIESELGLTR++LIRMA+LLGSDYTEGVSGIGIVNAIEVVHAFPEEDGL K
Sbjct: 718  KYVETYFMKDIESELGLTRQQLIRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQK 777

Query: 2927 FKEWIESPDPSILGKL------KTKSCKASNNNADGTGNNVEESVCEGNISRQPKDQPDA 3088
            FKEWIESPDPSI G+L      K+K  K   N +DG G  +E    +G+      D   A
Sbjct: 778  FKEWIESPDPSIFGQLHMETSSKSKKRKPGGNYSDGKGKGLEPECDQGS------DDLSA 831

Query: 3089 NDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRK 3268
            N+  +IK+IFM KHRNVSKNWHIP++FPS+SVISAYI+PQVD STE FSWG+PDL LLRK
Sbjct: 832  NETERIKKIFMSKHRNVSKNWHIPAAFPSESVISAYITPQVDNSTEPFSWGRPDLGLLRK 891

Query: 3269 LCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITG 3448
            LCWE+FGW  +KADELL+PVL+EYNKHETQLR+EAFY+FNERFAKIRS+RIKKA+KGITG
Sbjct: 892  LCWERFGWGKEKADELLLPVLREYNKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG 951

Query: 3449 TSSSELMDNHMQELSKSRTKGRLRSSGLKESKLEVHSDGTNVRGRKVSKPSRQENTEIKV 3628
             S  +  +      S S+T  +      K++    H+ G   RGR   + S   N E   
Sbjct: 952  KSFPDTDETEQDNPSASKTTKK------KDASSSSHARG---RGRGKMRSSEIRNME--- 999

Query: 3629 TQTDGHAALHTSFQVGGNGKSGLHAD-VQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3805
            +  D   +   SF           AD V+                               
Sbjct: 1000 SPEDKETSDPNSF-----------ADVVELTKESNNTNKSKKGRPPGCSKGRGRSRKNAG 1048

Query: 3806 XXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEGEVDV 3985
                 ++ DS     +S+SDE  H    G    +  +  A RRS+R+RK V Y E   D 
Sbjct: 1049 HGATGSQVDSDTKYSSSASDEDSHKTHAG---NYKSEGIAPRRSSRKRKQVSYME---DG 1102

Query: 3986 DEVCCSSIPIDGXXXXXXXXXXXXXXIWG---------------------------EVVA 4084
            DE   + +P+                I G                           E ++
Sbjct: 1103 DEADGNDVPVHQNSENDPGEAAANTDIVGQDTELNPVHQDASELNSNQMQTDTGTAEDIS 1162

Query: 4085 GDASGVDQVGKQSHLEERCFKDYLLSGGGFCEDESDELGVGGQHVASPVRDSVGPLEEQT 4264
            GD+ G +   ++ H  +   KDYL +GGGFC ++ DE    G    + + +         
Sbjct: 1163 GDSQGFEL--REDHQADSAPKDYLFTGGGFCMEDGDEQEPAGDRCGAEMEEPGTSDPSDL 1220

Query: 4265 QISGSLPGHDDLNSSCNELNQQPVLQTSSPLEHGSGEQVPKPGLRAMPSL-KRKRKT 4432
             I  S  G     S+  E  +   ++              + GL AMP+L KR+RK+
Sbjct: 1221 IIGVSDSGKSASLSTAGECTENAGMEARGASSSEQRRNASR-GLSAMPTLTKRRRKS 1276


>ref|XP_006373279.1| hypothetical protein POPTR_0017s10670g [Populus trichocarpa]
            gi|550319987|gb|ERP51076.1| hypothetical protein
            POPTR_0017s10670g [Populus trichocarpa]
          Length = 1605

 Score =  831 bits (2146), Expect = 0.0
 Identities = 557/1297 (42%), Positives = 723/1297 (55%), Gaps = 100/1297 (7%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RDD+ G+  R AHLLGF RRI KLL+LR +PVFVFDGATPALKRRT+ AR RLR
Sbjct: 37   QFMKAMRDDK-GEMVRNAHLLGFFRRICKLLYLRTKPVFVFDGATPALKRRTVIARRRLR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLE-------------------ELAAEIRRTDSKSNSK 304
            + A++KIRKTAEKLLLN LK+ RL+                   ++  E +R  S+S   
Sbjct: 96   ENAQAKIRKTAEKLLLNQLKSMRLKELAKDLEKQNAANKKGKQTKILEENKRVLSESEKL 155

Query: 305  GKQVARD--GDDGAATPNQ---QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 469
             + +A     ++G +  N                                          
Sbjct: 156  DEMLAASIAAEEGGSLDNNASTSAAAALEDMDSDGDGDEEMILFRLAASMVAEEEGSDED 215

Query: 470  XXMIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQI 649
              MI P    G +DP VLA+LPPSMQLDLLVQMRE+L+AENRQRYQK+KK P KFSELQI
Sbjct: 216  EEMILP---HGKVDPAVLAALPPSMQLDLLVQMREKLIAENRQRYQKVKKVPEKFSELQI 272

Query: 650  QSYLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIG 829
            Q+YLKTVAFRREID+VQK A G  +GGVQ SRIAS+AN+EFIFSSSF+GDK+ LT+ G+ 
Sbjct: 273  QAYLKTVAFRREIDQVQKAAAGNDVGGVQASRIASDANREFIFSSSFSGDKELLTTDGVK 332

Query: 830  RNGDTDHNASKNR---GSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXX 1000
            R    +      +       +   SI +SN+  G S   +S   F   VETY D+     
Sbjct: 333  RRKGHEQQKEPLKQPSSDFVAGVASICKSNTVTGFSQ-DESSSAFDDDVETYLDERGRMR 391

Query: 1001 XXXXXXXXXXMTRDLQRNLDLMKEYEEEK---FGENIGNEVHDTSKVFSGSTFSAKASAC 1171
                      MTRDLQRNLDLMKE E+EK           VH+ +K+ +   F       
Sbjct: 392  VSRVRAMGMHMTRDLQRNLDLMKEIEKEKTLSIKTPSARSVHNRNKIGTPRCFP------ 445

Query: 1172 SEENQDLIFENT-GISSRGATAHGFDEPSVVGNKAAIEVSF-VEDDSERKDTVDELFLHL 1345
               N++   E++ GI       +  +E S++ N+ ++++SF V D+S+   + DE+F  L
Sbjct: 446  ---NENHNGESSHGIDGNSTNLNKMNEQSLLSNETSVQISFEVGDESKHFSSDDEVFASL 502

Query: 1346 VSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHP-- 1519
            V+    +K  + G                     EE  +     +  ND     ++ P  
Sbjct: 503  VA-EKPVKISSAGNSTSRRYSDDSASDSDW----EEGIVKGKANSSPNDVELRTKLSPKV 557

Query: 1520 ----EDDEVDWEEG----------VCQTPRVV-----------------------SDSQG 1588
                +D EV+W EG          + ++ R +                       S    
Sbjct: 558  SNVSDDSEVEWMEGDSDIHDNSSYLAESKRKLVSKGTLEEEAALQDAIRRSLHDKSSYPA 617

Query: 1589 KHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDPNTELTCGGKESIQSMKVSA 1768
            K  N VS G +E+EA +Q+AI RSL D    KS     D  N + + G   + + +    
Sbjct: 618  KSRNQVSGGSIEDEAGLQDAIMRSLNDLGSEKSIHSESDPKNVKSSRG--HAYEGVGFLN 675

Query: 1769 KERNVGSTHMPLD-THPVSSCSPCIGQDRLGQLYYPCKKKTGQTKIDPENHLSSHAGYRS 1945
            +E N GS  +  D T    S S  +G + LG      +    Q      + L S   +  
Sbjct: 676  QEDN-GSAMLRKDATQQSKSISEILGFENLGDAG---EVNISQAFPSVGSQLKSSKAHNP 731

Query: 1946 DGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLEEGSMDSFKQGED 2125
            D    L +E+ +  + S+    +Q V D    G    P+ +S+      G +++    ++
Sbjct: 732  DDVVMLINESRESYVHSNPAWISQDV-DKRENGCQGMPSIESI------GPLEA----KE 780

Query: 2126 ETLLMEPTEAFV--GLSAN-VNLEANCSSLDKAPDTVVTDMHLQDLQDXXXXXXXXXXXX 2296
              L +EP       GLSA+      + S    A  T +    L D ++            
Sbjct: 781  NHLNLEPASDIENGGLSASHEKYSRDGSHTAIAASTYLPLTELIDDRNDKKAEPSMFIGG 840

Query: 2297 XALCQEK-----SVVN-----------VALDIDKENKQNLAINNAISTTGESSFGCESTI 2428
              +  E      SV N            A  +D E K    ++       +S+       
Sbjct: 841  EKISSEAEPPCLSVENSFPEDSVNGSDFAEKLDGEKKAEDHLSERECYISKSASMDNENE 900

Query: 2429 QESFTKEVSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLPY 2608
            Q +FT    E++L++E+ +L QE  +LGDEQ+KLERNAESV+SEMFAECQELLQMFGLPY
Sbjct: 901  QVNFT----EASLEKEMLILDQEYSNLGDEQRKLERNAESVTSEMFAECQELLQMFGLPY 956

Query: 2609 IIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESE 2788
            IIAPMEAEAQCAYME+ N VDG VTDDSDVFLFGAR+VYKNIFDDRKYVETYFMKDIE E
Sbjct: 957  IIAPMEAEAQCAYMELANYVDGAVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIEKE 1016

Query: 2789 LGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILG 2968
            LGL+RE+LIRMA+LLGSDYTEGVSGIGIVNAIEVV AFPEEDGL KF++WIESPDP+ILG
Sbjct: 1017 LGLSRERLIRMALLLGSDYTEGVSGIGIVNAIEVVTAFPEEDGLQKFRDWIESPDPAILG 1076

Query: 2969 K--------LKTKSCKASNNNADGTGNNVEESVCEG-NISRQPKDQPDANDGSKIKEIFM 3121
            K        ++ K  K   + A  TGN +E +   G NI +  +++  A+    IK++FM
Sbjct: 1077 KFDVQTGLGVRKKESKVGGSEAKCTGNGMEGTNPSGLNIPQAHEEKQSADHSQVIKQVFM 1136

Query: 3122 DKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQ 3301
            DKHRNVSKNWHIPSSFPS++VISAY  PQVD+STE F+WGKPDL  L +LCWEKFGW  Q
Sbjct: 1137 DKHRNVSKNWHIPSSFPSEAVISAYSCPQVDKSTEPFTWGKPDLHALHRLCWEKFGWHIQ 1196

Query: 3302 KADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHM 3481
            K+DELL+PVLKEYNKHETQLRLEAFY+FNERFAKIRS+RIKKAVKGITG   +++MD+ +
Sbjct: 1197 KSDELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGNQDADMMDDPV 1256

Query: 3482 QELSKSRTKGRLRSSGLKESKLEVHSDGTNVRGRKVS 3592
            +E+SKSRT      SG  E +           G K S
Sbjct: 1257 EEVSKSRTGNISGKSGDNEPQTHSKRTARTAPGNKSS 1293


>ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3-like [Solanum lycopersicum]
          Length = 1539

 Score =  814 bits (2102), Expect = 0.0
 Identities = 572/1513 (37%), Positives = 770/1513 (50%), Gaps = 64/1513 (4%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RD++ G+  R AH+LGF RRI KLL+LR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37   QFMKAMRDEK-GEMVRNAHILGFFRRICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKGKQVARDGDDGAATPNQQX 361
            + A++KIRKTAEKLLLNHLK  RL+EL+ ++      +++KGK+V  +        N   
Sbjct: 96   ENAQAKIRKTAEKLLLNHLKAMRLKELSVDLENQRKLNDAKGKKVITEAT--GMMENMAE 153

Query: 362  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGG------IDPTVL 523
                                                     P   D        I P   
Sbjct: 154  GNALGVENYDKEALDEMLAASIQAEEDWNFADDASTSCAAAPAENDNTDEDEEMILPDTQ 213

Query: 524  ASLPPSMQLDLLVQMRERLMAE--------NRQRYQKIKKAPSKFSELQIQSYLKTVAFR 679
              + PS+   L   M+  L+ +        NRQ+YQK+KKAP KFSELQIQSYLKTVAFR
Sbjct: 214  GKVDPSVLAALPPSMQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFR 273

Query: 680  REIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNAS 859
            REI EVQK A GRG+GGV+TSRIASEAN+EFIFSSSFTGDK  L SAG  +         
Sbjct: 274  REIGEVQKAAAGRGIGGVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQTSKKSSEVQ 333

Query: 860  KNRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXXXXXXXXXXXMTR 1039
                   +AS +  R +S+V  S +++    F   VETY D+               MTR
Sbjct: 334  TENNLANAASDASTRKSSSVLESIVSEPETAFNDDVETYLDERGHLRVSRLRAMGVRMTR 393

Query: 1040 DLQRNLDLMKEYEEEKFGENIGNEVHDTSKVFSGSTFSAKASACSEENQDLIFENTGISS 1219
            DLQRNLDLMKE EEE    N      D S V + S           +    +  +     
Sbjct: 394  DLQRNLDLMKEIEEENVSRN-----KDFSDVPTVSDTDVHTPVIVSDTISHLNSSNPDDD 448

Query: 1220 RGATAHGFDEPSVVGNKAAIEVSFVEDDSER--KDTVDELFLHLVSGSSTIKPLTEGTFL 1393
              A  +  +E S + +   I++SF ED+ E    +  D++F  LV+G  T++ L + +  
Sbjct: 449  GKACLNNKNEQSELRSGTTIQISF-EDNFEHDCANDDDDIFASLVAGDPTMEFLMDHSPS 507

Query: 1394 XXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHPEDD--EVDWEEG---VCQ 1558
                           GV+E+     +  N Q +  +  +I   DD  EV+WEEG   +C+
Sbjct: 508  KKQSLDSASDVEWEEGVIEKKGDLLS-NNSQGERQAPLEIDGMDDEAEVEWEEGCVDICE 566

Query: 1559 TPRVV-SDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDPNTELTCGG 1735
             P ++ SDS+  ++     G LEEEA+ QEA+RRSLED    K    +      E++   
Sbjct: 567  DPPLLPSDSKSAYK-----GALEEEANYQEAVRRSLEDM---KDHRYIDKSHEKEMS--- 615

Query: 1736 KESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKK--TGQTKIDP 1909
            +E+IQ         + G  +     H +        + +   L+    +    G  K   
Sbjct: 616  EEAIQIAAQGISSESFGQENYCPTVHKILQQKDLPSEIQTADLHDTVHEMDIAGSNK--- 672

Query: 1910 ENHLSSHAGYRSDGESSL-NDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACL 2086
               L SH G +    S   N +  K    +  NL+ +            + T +++   +
Sbjct: 673  --SLGSHMGEQFQANSGYGNMQIEKANSHADRNLQIEKAT---------SHTNRNLHCDI 721

Query: 2087 EEGSMDSFKQGEDETLLMEPTEAFVGLSANVNLE--ANCSSLDKAPDTVVTDMHLQDLQD 2260
                       E +    +  +  VG+S N N +  ++ +S++++      +    D Q+
Sbjct: 722  HMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNTQSASDVTSIEQSTLNESMNARTTDAQE 781

Query: 2261 XXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFGCESTIQESF 2440
                              K+        D  + QNL    A         G   +     
Sbjct: 782  YESEAAAHHYTHETTEITKAFTE-GFTTDINSAQNLDEEGACDDPLFERIGNLDSASTKE 840

Query: 2441 TKEVSESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAP 2620
             ++V  ++L+EE+ +L +ER+ LGDEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAP
Sbjct: 841  DQKVMMASLEEEMHVLDKEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAP 900

Query: 2621 MEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLT 2800
            MEAEAQCAYME+ +LVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFMKD+ESELGL 
Sbjct: 901  MEAEAQCAYMELTDLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDVESELGLD 960

Query: 2801 REKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKL-- 2974
            REK+IRMA+LLGSDYTEGVSGIGIVNAIEVV+AFPEEDGL KF+EW+ESPDPSILG L  
Sbjct: 961  REKIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWVESPDPSILGGLDS 1020

Query: 2975 ------KTKSCKASNNNADGTGNNVEESVCEGNISRQPKDQPDANDGSKIKEIFMDKHRN 3136
                  + + CK  + +   + +N+     EGN + + +         K ++ FM+KHRN
Sbjct: 1021 QVGSNSRKRGCKGGDPDMSCSTSNL-----EGNAASEDR-------AEKSRQSFMNKHRN 1068

Query: 3137 VSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKADEL 3316
            +SKNWHIPSSFPS++VISAY SP+VD+STE F+WGKPD+ +LRK+CWEKFGWS+QKADEL
Sbjct: 1069 ISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADEL 1128

Query: 3317 LVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQELSK 3496
            LVPVLKEYNKHETQLRLEAFY+FNERFAKIRS+RI KAVK +TG  SS+LMD   Q+   
Sbjct: 1129 LVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKYMTGNKSSDLMDGSAQDAPG 1188

Query: 3497 SRTKGRLRSSGLKESKLEVHSDGTNVRGRKVSKPSRQENTEIKVTQTDGHAALHTSFQVG 3676
               K  ++S+ + E K+E        RG + +    +E T              T   VG
Sbjct: 1189 ICKKRVVKSNDMNEEKME-----DPPRGHESAGADYEETT--------------TKRSVG 1229

Query: 3677 GNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEEAEFDSTEFAEAS 3856
               +      +Q                                   +A  +S+  ++ S
Sbjct: 1230 KQSRKRKGGHLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVWKAGKNSSRSSKIS 1289

Query: 3857 SSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAE--------------------GE 3976
            S  E     E    ++ P+K   +RRS R RK V Y+E                     E
Sbjct: 1290 SEGEKDSDIEQQSQIEKPEKTNQTRRSQRHRKIVNYSEKRDDESDKDDGDSTAEKLERRE 1349

Query: 3977 VDVDEVCCSSIPIDGXXXXXXXXXXXXXXIWGEVVAGDASGVDQVGKQSHLEERCF---- 4144
              VD       P D                    +  +A G +       + +  +    
Sbjct: 1350 AGVDVDVAERYPADSSKMNENDASNDYCPQELPNLETNAGGAEMESTAQPIFDETYDPIP 1409

Query: 4145 -----KDYLLSGGGFCEDESDELGVGGQHVASPVRDSVGPLEEQTQISGSLPGHDDLNSS 4309
                 K+YL  GGGFC +E+D       + +SP+    G        S  L G ++  ++
Sbjct: 1410 GDLLSKEYLKMGGGFCLEENDGDMEHEINASSPILSVEG---SDIYNSSQLLGDENNGNA 1466

Query: 4310 CNELNQQPVLQTS 4348
             N+L   P  +TS
Sbjct: 1467 SNQLISSPSRKTS 1479


>ref|XP_006848746.1| hypothetical protein AMTR_s00026p00019230 [Amborella trichopoda]
            gi|548852179|gb|ERN10327.1| hypothetical protein
            AMTR_s00026p00019230 [Amborella trichopoda]
          Length = 1467

 Score =  813 bits (2100), Expect = 0.0
 Identities = 540/1286 (41%), Positives = 705/1286 (54%), Gaps = 81/1286 (6%)
 Frame = +2

Query: 2    QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
            QF+KA+RD+R G+  + AHL+GF RRI KLLFLR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37   QFMKAMRDER-GEMVKNAHLIGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQR 95

Query: 182  DQARSKIRKTAEKLLLNHLKTKRLEELAAEIRRTDSKSNSKGKQV--------ARDGDDG 337
            + A++KIRKTAEKLLLNHLK ++LEELA E      K  +KGK V        A +  +G
Sbjct: 96   ENAQAKIRKTAEKLLLNHLKKRKLEELAKEFAVGRKKIGAKGKGVVTEPSKLVAEEEKEG 155

Query: 338  AATP----NQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGG 505
                    N                                         MI+PT   G 
Sbjct: 156  VKEAYNQDNADALLAASLAAEEDGAFISEASTSAAGVPIEEEDNLDESEEMIFPTGQ-GK 214

Query: 506  IDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRRE 685
            +DP +LA+LPPSMQLDLLVQMRE+LMAENRQ+YQK+KKAPSKFSELQI SYLKTVAFRRE
Sbjct: 215  VDPAILAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPSKFSELQIHSYLKTVAFRRE 274

Query: 686  IDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNASKN 865
            I+EVQK A GRG+GG+  SRIASE+N+EFIFSSS++GDK  L+++G+  +GDT+H     
Sbjct: 275  INEVQKFAGGRGVGGLPASRIASESNREFIFSSSYSGDKNVLSTSGVSSSGDTEHQLQGT 334

Query: 866  RGS---LTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXXXXXXXXXXXMT 1036
                  + S   +IG S++    ++I +S ++    VETY D+               MT
Sbjct: 335  NSKFQPVESIPSTIGFSSNT--RAAIDESERELDGAVETYLDERGRVRVSRLRGMGIRMT 392

Query: 1037 RDLQRNLDLMKEYEEEKFGEN------IGNEVHDTSKVFSGSTFSAKASACSEENQDLIF 1198
            RDLQ NL++MKE E+ K  E       +     + +K    S    KAS+  E N+  +F
Sbjct: 393  RDLQWNLEMMKELEQVKSTETNNMVGLVATTDDEVAKGAPSSICPKKASSLKENNERDLF 452

Query: 1199 E-NTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDD--SERKDTVDELFLHLVSGSSTIK 1369
            E   G S +    +     S +G   AIE+SF ED+     KD  DE F  LV+      
Sbjct: 453  EGRNGDSIQMDENNLLHTCSTLGGTHAIEISFSEDEFVGHGKDE-DEFFTSLVA------ 505

Query: 1370 PLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNKQNDSISAEQIHPEDDEVDWEEG 1549
                                       ENT +  E +      S      ++ EVDWE+G
Sbjct: 506  ---------------------------ENTASMEESHPSQVEASNGS---DEGEVDWEDG 535

Query: 1550 VCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDPNTELTC 1729
             C  P   S+S  + +  VS G L EEA+IQEAIRRSL++    K   +  +        
Sbjct: 536  TCDLPVETSNSPIETKQTVSKGSLAEEAEIQEAIRRSLQENSGGKCINLFSEVETP---- 591

Query: 1730 GGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTGQTKIDP 1909
              K SIQ   +  +   + S+                              + G+ KID 
Sbjct: 592  --KPSIQRFDICKESNKIISS------------------------------EDGEHKIDG 619

Query: 1910 ENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLE 2089
             + L       S  E+SL+           H +    + D      LQ+    S+   ++
Sbjct: 620  NSVLLDFPLTGSQFEASLHTRMGSEQDGIKHQIAGPVLSDAYQDQKLQSHKNCSI---MQ 676

Query: 2090 EGSMDSFKQGEDETLLMEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQDLQDXXX 2269
            +  +  F++ E  + L  P         NVN +          D    D  L +L     
Sbjct: 677  DELVVDFRKQEIVSELEGP--------PNVNSDVPAIMASNVFDAFSGDTPLNNLHHSLS 728

Query: 2270 XXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESS--FGCESTIQESFT 2443
                             + N  +DI + + +   +++ I     S+     +  I  S  
Sbjct: 729  SQ-----------HHCDIENAPVDIKEFSSKEKGLSDDIKDREISAKEADLDLKISSSKE 777

Query: 2444 KEVSESALDEEISLL--------------------RQERKDLGDEQ-------------- 2521
            KE+S+ A + E++ +                    R E +D  DE+              
Sbjct: 778  KELSDDAKETEVNAVEVDLLADQEDYHKDVNEFQDRMEFQDTLDEEISLLRQEQLDLGDQ 837

Query: 2522 -KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDV 2698
             +KLERNAE  SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSD 
Sbjct: 838  QRKLERNAEYASSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELSNLVDGVVTDDSDA 897

Query: 2699 FLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVN 2878
            FLFGARS+YKNIFDDRKYVE Y +KD+E+ELGLTR+KLIRMA+LLGSDYTEG+SG+GIVN
Sbjct: 898  FLFGARSIYKNIFDDRKYVEMYLIKDVENELGLTRDKLIRMALLLGSDYTEGISGVGIVN 957

Query: 2879 AIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKTKSCKASNNNADGTGNNVEESVCEG-- 3052
            AIE+V+AFPEE GL KF+EW+ESPDPSIL K+  ++ K +   +       +E VCE   
Sbjct: 958  AIEIVNAFPEEGGLQKFREWLESPDPSILNKVHAQTGKETRKKSSKESKK-DEDVCESMG 1016

Query: 3053 ------NISRQPKDQPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVD 3214
                  N   +     ++ D + +K+IFM+KHRNVSKNW IPSSFPS+SV+SAY SPQVD
Sbjct: 1017 DVLLDDNSDGRCNIDQESEDIANLKQIFMEKHRNVSKNWCIPSSFPSESVLSAYKSPQVD 1076

Query: 3215 QSTESFSWGKPDLFLLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNER 3394
            +STE F WGKPDL  LRKLCWE+FGW +QKADELL+PVL+E+N+HETQLRLEAFYTFNE+
Sbjct: 1077 ESTEPFLWGKPDLLFLRKLCWERFGWPSQKADELLLPVLREHNRHETQLRLEAFYTFNEK 1136

Query: 3395 FAKIRSQRIKKAVKGITGTSSSELMD-NHMQELSKS----RTKGRLRSSGLKESKLEVHS 3559
            FAKIRS+RI+KAVKGITG  SSE+M     +E S S    R KG+   +  +++  EV +
Sbjct: 1137 FAKIRSKRIQKAVKGITGNRSSEMMHVPGSKEASTSSEPKRRKGKSPPNSNEDAFAEVLN 1196

Query: 3560 DGTNVR-------GRKVSKPSRQENT 3616
            + T V        G +VSK  R++ T
Sbjct: 1197 NDTFVEGNDEECTGNQVSKQQRKQRT 1222


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score =  803 bits (2073), Expect = 0.0
 Identities = 572/1444 (39%), Positives = 754/1444 (52%), Gaps = 134/1444 (9%)
 Frame = +2

Query: 500  GGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFR 679
            G +DPTVLA+LPPSMQLDLLVQMRERL+AENRQ+YQK+KKAP KFSELQI++YLKTVAFR
Sbjct: 281  GKVDPTVLAALPPSMQLDLLVQMRERLIAENRQKYQKVKKAPEKFSELQIEAYLKTVAFR 340

Query: 680  REIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNAS 859
            REID VQK A G G+GGVQ+SRIASEAN+EFIFSSSFTGDKQ LTS G+ RNG+    A 
Sbjct: 341  REIDHVQKAAAGNGVGGVQSSRIASEANREFIFSSSFTGDKQLLTSTGVQRNGNKQQQAP 400

Query: 860  KNRGSLTSASCSIGRSNSAVGSSSIAKSPKD-FGPGVETYYDDXXXXXXXXXXXXXXXMT 1036
                +  S +C    S S   S S+   P+  F   VETY D+               MT
Sbjct: 401  TMNPTFDSMNCVTSTSKSNAVSGSVQDEPRRVFDEDVETYLDENGRIRVSRVRAMGMRMT 460

Query: 1037 RDLQRNLDLMKEYEEEKFG--ENIGNEVHDT-SKVFSGSTFSAKASACSEENQDLIFENT 1207
            RDLQRNLDLMKE E+E+    E   ++   T  K+ S  +F +K     E + D   ++ 
Sbjct: 461  RDLQRNLDLMKEIEQERTHAIETAPSQSELTRDKIGSPKSFPSKKLHV-ESSHDKHSDSV 519

Query: 1208 GISSRGATAHGFDEPSVVGNKAAIEVSFVEDD-SERKDTVDELFLHLVSGSSTIKPLTEG 1384
             ++ R       ++ S++ ++ +I++SF  D  S+  D+ D++F  LV+G     P  + 
Sbjct: 520  KLNER-------NQQSMLNDEGSIQISFEADGRSKCLDSDDDVFTSLVAGQPVNIPSVDN 572

Query: 1385 TFLXXXXXXXXXXXXXXXGVVEE--NTITPNERNKQNDSISAEQIHPEDDEVDWEEGVCQ 1558
                              G +E   N+ + N   + N  +  + I  +D EV+WE+G   
Sbjct: 573  ITSRIQTSDSASDGDWEEGTIETRGNSSSNNLALETNPPLKEKNIS-DDSEVEWEDG--- 628

Query: 1559 TPRVVSDSQGKHENA---------VSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDP 1711
                     G HEN+          S G +EEEAD+QEAIRRSLED      +  L +  
Sbjct: 629  --------GGDHENSSFPSESKMPASRGYMEEEADLQEAIRRSLEDLGGEIFNNTLSE-- 678

Query: 1712 NTELTCGGKESIQSMKVSAKERNVGSTHMP-----LDTHPVSSCSPCIGQDRLGQLYYPC 1876
            + +L    K   + +    +E N G   +P         P S  S     D++GQ  Y  
Sbjct: 679  HEKLKISDKNVYKDVGFLDQEDNTGGLILPEKDVTQQDQPFSEISATGKIDKVGQ--YDI 736

Query: 1877 KKKTGQTKIDPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQT 2056
             +         ++ L+    +  D    L ++  +  + S+    ++++  +GS+     
Sbjct: 737  SQV-----FSSQSQLAFSEAHDPDNMDILTNKLYERDMGSNDGQPSRALNMEGSV----- 786

Query: 2057 PTAKSVQACLEEGSMDSFKQGEDETLLMEPTEAFV---GLSANVNLEANCSSLDKAPDTV 2227
                    C    S +S    E   +L + +E  V   GLS +  + +  S++ KA  + 
Sbjct: 787  --------CRGMSSAESAAPLETHVILKQFSETNVEDMGLSTSTKMRSGISNISKAAWSN 838

Query: 2228 VT-----DMHLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAIST 2392
            V+     D     ++                CQ   + N +  +  E   NLAI   + +
Sbjct: 839  VSFASSIDDDRNKVEAEPSVLVNEEKRPETYCQSVKITNPSTSV-MEPSINLAIGTDVES 897

Query: 2393 --TGESSFG---------CESTIQ-ESFTKEVSESALDEEISLLRQERKDLGDEQKKLER 2536
               GE + G          E  +  E+  ++ SE  L EEI +L QER +LG EQKKLER
Sbjct: 898  KLAGEKNSGHLFNEKKQDMEKVVSNENLREDFSEVTLQEEILILGQERMNLGSEQKKLER 957

Query: 2537 NAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGAR 2716
            NAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ NLVDGVVTDDSDVFLFGAR
Sbjct: 958  NAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAR 1017

Query: 2717 SVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVH 2896
            +VYKNIFDDRKYVETYFMKDIE ELGLTREKLIRMA+LLGSDYTEG+SGIGIVNAIEVV+
Sbjct: 1018 NVYKNIFDDRKYVETYFMKDIERELGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1077

Query: 2897 AFPEEDGLCKFKEWIESPDPSILGKLKTKSCKA--SNNNADGTGNNVEESVCEGNISRQP 3070
            AFPEEDGL KF+EWI SPDP+ILGKL  +  ++      +D   NNV +S  +  +S   
Sbjct: 1078 AFPEEDGLEKFREWIYSPDPTILGKLDVRDGRSMRRKGESDSANNNVVDSFGK-KVSESH 1136

Query: 3071 KDQPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPD 3250
            K++  A+   +I++IFMDKHRNVSKNWH+PSSFPS++VISAY+SPQVD+STE F+WGKPD
Sbjct: 1137 KEEDSADHTQEIRQIFMDKHRNVSKNWHVPSSFPSEAVISAYMSPQVDKSTEPFTWGKPD 1196

Query: 3251 LFLLRK------LCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRS 3412
            L +LR+      +CWEKF W  QK+DELL+PVLKEYNKHETQLRLEAFYTFNERFAKIRS
Sbjct: 1197 LHVLRRQVMIFIICWEKFAWGVQKSDELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRS 1256

Query: 3413 QRIKKAVKGITGTSSSELMDNHMQELSKSRTKGRL---------RSSGLKESKLEVHSDG 3565
            +RIKKA+KGITG  SSE+MD+ +++ SKSR K  +           + LK  +  + SD 
Sbjct: 1257 RRIKKALKGITGYQSSEMMDDDVKDSSKSRKKRTIGPGESVDSEPDAALKREREGLFSDK 1316

Query: 3566 TNVRGRKVSKPSRQENTEIKV----------TQTDGHAALHTSFQVGGNGKSGLHADVQX 3715
            T+   +  +K SR+      V           Q +G    H      G GK         
Sbjct: 1317 TDSLEKSTTKRSRKRTAGQPVLTERENPGQHLQAEGRRKTHKGQCGDGRGKG-------- 1368

Query: 3716 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEEAEFDSTEFAEASSSDESMHSDELGK 3895
                                            +   +    E +++S    S   DEL  
Sbjct: 1369 ------------------------RGRGRGRGRGRGKGSGIELSDSSYDYVSGDDDELEV 1404

Query: 3896 VLKFPDKKPASRRSTRQRKHVLYA-EG-EVDVDEVCCSSIPIDGXXXXXXXXXXXXXXIW 4069
             ++  +     RRSTR RK   Y  +G +VDVD    S++                  + 
Sbjct: 1405 RIEKSEGPQELRRSTRSRKPANYTLDGFKVDVD----SAVDRGDKQSNESAAELDLFGVI 1460

Query: 4070 GEVVAGDASGVDQVGKQSHLEE----------------RCFKD----------------- 4150
            G+  + DAS     GK+ H  E                 C  D                 
Sbjct: 1461 GK--STDASSCLN-GKEQHKVEDALPEDFSKDYLENGQHCLTDDNGSEPKYPGGASVSKD 1517

Query: 4151 YLLSGGGFCEDESDELGVGGQHVASPVRDSVGPLEEQTQISGSLPGHD------------ 4294
            YL  GGGFC DES E         SP   +   + + + +SGS+   D            
Sbjct: 1518 YLKMGGGFCMDES-ETCTDQDAAHSPSMPAFEEMADASNVSGSMEETDRGEGLLPLVCSI 1576

Query: 4295 ----------------DLNSSCNELNQQPV---LQTSSPLEHGSGEQVPKPGLRAMPSLK 4417
                            D   S + LN   +    + S  L   +G +   P L AMP LK
Sbjct: 1577 KRTLNDMQDGGKTNAHDAEPSTDCLNATDIGDHSEASLCLPETTGSKTIAPTLSAMPFLK 1636

Query: 4418 RKRK 4429
            RKR+
Sbjct: 1637 RKRR 1640



 Score =  129 bits (323), Expect = 2e-26
 Identities = 67/108 (62%), Positives = 87/108 (80%), Gaps = 3/108 (2%)
 Frame = +2

Query: 2   QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
           QF+KA+R+++ G+  R AHLLGF RRI KLL+LR +PVFVFDGATPALKRRT+ AR R R
Sbjct: 37  QFMKAMRNEK-GEMVRNAHLLGFFRRICKLLYLRTKPVFVFDGATPALKRRTVIARRRQR 95

Query: 182 DQARSKIRKTAEKLLLNHLKTKRLEELAAEI---RRTDSKSNSKGKQV 316
           + A++KIRKTAEKLLLNHLK+ RL+ELA ++   RR     ++KGK++
Sbjct: 96  ESAQAKIRKTAEKLLLNHLKSMRLKELAKDLENQRRKQKIDDAKGKKI 143


>gb|EMS51028.1| DNA repair protein UVH3 [Triticum urartu]
          Length = 1413

 Score =  797 bits (2059), Expect = 0.0
 Identities = 582/1496 (38%), Positives = 766/1496 (51%), Gaps = 98/1496 (6%)
 Frame = +2

Query: 236  LKTKRLEELAAEIRRTDSKSNSKGKQVAR---------DGDD----------GAATPNQQ 358
            LK  RLEELAA+I+   +K ++KGKQV           DGD           GAA P  Q
Sbjct: 24   LKASRLEELAAQIKSDRAKHDAKGKQVGSSRGEETEKTDGDQNRNDDGENSRGAAAPINQ 83

Query: 359  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------MIYPTTMDGGID 511
                                                            MI+P T  G ID
Sbjct: 84   EKLDELLAASLAAEDEAGLTGKGERNPASVPSQEGTGIDEDENDDDEEMIFPITT-GDID 142

Query: 512  PTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRREID 691
            P VLASLPPSMQLDLLVQMRER+MAENRQ+YQKIKK P+KFSELQIQSYLKTVAFRREI+
Sbjct: 143  PAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQSYLKTVAFRREIE 202

Query: 692  EVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRNGDTDHNASKNRG 871
            EV+K A G+ +GG+QTS+IASEAN+EFIFSSSFTGDKQ L   G+      D   SK   
Sbjct: 203  EVRKGAAGKDVGGIQTSKIASEANREFIFSSSFTGDKQTLAQRGVEEQ-IVDSGKSK--- 258

Query: 872  SLTSASCSIGRSNSAVGSSSI----AKSPKDFGPGVETYYDDXXXXXXXXXXXXXXXMTR 1039
              T  S +I +S+ +  S SI     +    FGP VETY D+               MTR
Sbjct: 259  --TEISSAIFKSSPSSSSRSIKPHSGEPSTGFGPDVETYRDERGRMRVSRVRGMGIRMTR 316

Query: 1040 DLQRNLDLMKEYEEEK-FGE-NIGN------EVHDTSKVFSGSTFSAKASACSEENQDLI 1195
            D+QRNLD +KE+E+ K  G+ NIG       E  D  +    +     +    E+  ++I
Sbjct: 317  DIQRNLDFIKEHEQAKSMGQANIGKGSTNNEEPPDFPEHLFENDGLQSSVGLGEDFGEII 376

Query: 1196 FENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERKDTVDELFLHLVSGSSTIKPL 1375
             +N   SS    +    E S  G+K  IE+SFV+D    KD  D+LFLHLVSG+S+ K  
Sbjct: 377  GDNHHTSSLVGGSDDISESSCHGSKDTIEISFVDDQIGVKDNDDKLFLHLVSGTSS-KLF 435

Query: 1376 TEGTFLXXXXXXXXXXXXXXX-GVVEENTITPNERNKQNDSISAEQIHPEDDEVDWEEGV 1552
             +G  L                GV+EE T+      K   S   +     DDEV+WEEGV
Sbjct: 436  ADGDRLAKTTEESDNSEGIWEEGVIEEQTLPMKVGEKDYQSSPPDNCCT-DDEVEWEEGV 494

Query: 1553 CQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSGILPDDPNTELTCG 1732
            C  P V   S+  ++  +  G +EEEA IQEAIRRSLED E+ +    +P+D  T +   
Sbjct: 495  CDVPEVPFSSE-YNQCKLPKGDIEEEALIQEAIRRSLEDSEKQEFENGIPEDLETSIE-- 551

Query: 1733 GKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQLYYPCKKKTGQTKI--D 1906
              +S+QS  V         +  P  T+  S  S   G++ + ++    K  +G+  +  D
Sbjct: 552  -DKSLQSHDVPKP------SEAPATTYSHSEAS--FGKETIKEM--GIKNSSGEVGVMHD 600

Query: 1907 PENHLSSHAGYRSDGESSLNDETNKGLLVSSHNL-KTQSVVDDGSLGTLQ-----TPTAK 2068
            PE   +     R + E     E+N G   ++ +  +  S V + S  TL      +P  +
Sbjct: 601  PEVLEAE----RKENEKQAQLESNDGRAGTNTDYSRGSSPVYNVSTSTLTARPSCSPKVQ 656

Query: 2069 SVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQ 2248
               A +   S+  + + E++  L                ++ C++ D          H +
Sbjct: 657  DNDAIVSATSVHEWPKEEEQNTLNSH-------------KSECNTNDPYIGETSMAAHKE 703

Query: 2249 DLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFGCESTI 2428
             L D                  + V N A+      K+N+   +   TT E +    + +
Sbjct: 704  PLMD------------------ELVANDAIQ-----KENVIQEDMNITTSEIN---STRL 737

Query: 2429 QESFTKEV-SESALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 2605
             E++   + SE+ L++EIS LRQE+ DLG+E++KLE +AESVSSEMFAECQELLQMFGLP
Sbjct: 738  NENYDSHIISENNLEKEISFLRQEQVDLGNERRKLESHAESVSSEMFAECQELLQMFGLP 797

Query: 2606 YIIAPMEAEAQCAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIES 2785
            YIIAPMEAEAQCAYME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETY MKDIES
Sbjct: 798  YIIAPMEAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKDIES 857

Query: 2786 ELGLTREKLIRMAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSIL 2965
            ELGLTRE+LIRMA+LLGSDYTEG+SGIGIVNAIEVVHAFPEEDGL +F+EWIESPDP+IL
Sbjct: 858  ELGLTREQLIRMALLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQQFREWIESPDPAIL 917

Query: 2966 GKL------KTKSCKASNNNADGTGNNVEESVCEGNISRQPKDQPDANDGSKIKEIFMDK 3127
            GK        +K  K+  N +   GN++E    EG+ + Q      +N+   IKE+FM  
Sbjct: 918  GKFDVETSGSSKRRKSGGNESCEKGNSLEPECVEGSDNNQ-----SSNETQHIKEVFMSN 972

Query: 3128 HRNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKA 3307
            HRNVSKNWHIPS+FPS++VI+AYISPQVD STE FSWG+PDL LLRKLCWE+FGW+ +KA
Sbjct: 973  HRNVSKNWHIPSTFPSETVINAYISPQVDDSTERFSWGRPDLSLLRKLCWERFGWNKEKA 1032

Query: 3308 DELLVPVLKEYNKHE-----------------TQLRLEAFYTFNERFAKIRSQRIKKAVK 3436
            DELL+PVLKEYNKHE                 TQLR+EAFY+FNERFAKIRS+RI+KA+K
Sbjct: 1033 DELLLPVLKEYNKHEGMISAFEYANSCGLVVLTQLRMEAFYSFNERFAKIRSKRIQKAIK 1092

Query: 3437 GITGTSSSELMDNHMQELSKSRTKGRLRSSGLKESKLEVHSDGTNVRGRKVSKPSRQENT 3616
            GITG + SE   + + E S S +    +    + S+ +    G    G +      QE+ 
Sbjct: 1093 GITGKTFSE--TDELNEDSPSTSDAPKKKEAGRSSRAKPR--GKRNTGAEPRNMGSQEDD 1148

Query: 3617 EIKVTQTDGHAALHTSFQVGGNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3796
            +I                  G+  S   AD                              
Sbjct: 1149 KI------------------GDPNSFADADALAEEQRNVSKKKNASPSGRSRGRGRKKMN 1190

Query: 3797 XXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEGE 3976
                   + E    + +   S+DE  H        K+  +    R+S R+RK V Y E +
Sbjct: 1191 VRQETTRDEEDFEVQMSNL-SADEDSHKRHTN---KYKSEGITVRKSNRKRKQVTYMEDD 1246

Query: 3977 VDVDE--VCCSSIPIDGXXXXXXXXXXXXXXIWGEVVAGDASGVDQVGKQSHLE------ 4132
             + D+  V    +  D                   ++  D S ++    Q H++      
Sbjct: 1247 HEADDNTVPLHQVDEDDPSQIGTDIDTAGRDTQSNLLHQDTSELN--SDQMHMDPGTAED 1304

Query: 4133 ---------------ERCFKDYLLSGGGFCEDESDELGVGGQHVASPVRDSVGPLEEQTQ 4267
                           +   K+YL +GGGFC +E ++     +     V  +    E+   
Sbjct: 1305 LNEDPLGFELYDDQTDSAPKEYLFTGGGFCAEEDEQDTAVDRSGGETVGGTSDACEDIAG 1364

Query: 4268 IS--GSLPGHDDLNSSCNELNQQPVLQTSSPLEHGSGEQVPKPGLRAMPSLKRKRK 4429
            +S  G   G       C E         SS   H +G  +PK         KR+RK
Sbjct: 1365 VSDGGKSIGLSTPTEECAEDASTDARGASSSKRHNAGSGLPK-------IAKRRRK 1413


>gb|EOY02333.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score =  768 bits (1984), Expect = 0.0
 Identities = 555/1330 (41%), Positives = 713/1330 (53%), Gaps = 91/1330 (6%)
 Frame = +2

Query: 476  MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQS 655
            MI P  M G +DP VLA+LPPS+QLDLLVQMRE+LMA NRQ+YQK+KKAP +FSELQIQS
Sbjct: 298  MILPA-MHGNVDPAVLAALPPSLQLDLLVQMREKLMAVNRQKYQKVKKAPEQFSELQIQS 356

Query: 656  YLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRN 835
            YLKTVAFRREIDEVQ+ A GRG+ GVQTSRIASEAN+EFIFSSSFTGDKQ LTSA   R+
Sbjct: 357  YLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSARKERD 416

Query: 836  GDTDHNASKNR--GSLTSASCSIGRSNSAVGSSSIAKSPKDF-GPGVETYYDDXXXXXXX 1006
             D       N   G L S   SI +SN  V + S+   P       V TY D+       
Sbjct: 417  EDKQQEIHSNHPSGFLNSVK-SICKSN--VVTESVPNEPTSAPDEDVGTYLDERGQVRVS 473

Query: 1007 XXXXXXXXMTRDLQRNLDLMKEYEEEKFGENIGNEVH---DTSKVFSGSTFSAKASACSE 1177
                    MTRDLQRNLDLMKE E+E+   N    V    D +++ +    S+       
Sbjct: 474  RVRGMGIRMTRDLQRNLDLMKEIEQERTNSNKDMNVQSVPDRNRIGTSKNSSS------- 526

Query: 1178 ENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERK--DTVDELFLHLVS 1351
            ENQ L   + G +      +  ++ S    +A +E++F EDD   K  D  D++F  L +
Sbjct: 527  ENQFLKTSHDG-NCESVNLNESNQQSAFKTEACMEITF-EDDGRNKFFDDDDDIFARLAA 584

Query: 1352 GSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENT--ITPNERNKQNDSISAEQIHPED 1525
            G     P  E                   G+ E N   +      K N S     I  E 
Sbjct: 585  GDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEGNWDGVAHCMDAKNNPSYKESNISDES 644

Query: 1526 DEVDWEEGVCQTPRVVSDSQGKHENAVSI--GLLEEEADIQEAIRRSLED---------- 1669
             EV+WEE     P+    S G  E+ V +  G LEEEAD+QEAIRRSL D          
Sbjct: 645  -EVEWEEEPSDAPK---SSSGPVESGVMLSKGYLEEEADLQEAIRRSLTDIGAKKSNYFP 700

Query: 1670 --FERPKSSGILPDD----PNTELTCGG-----------KESIQSMKVSAKERNVGSTHM 1798
              FE+ K  G   D+    P+ + +  G            +S Q++    K  +V    +
Sbjct: 701  SEFEKLKKFGKNMDEGFGSPHGKSSMDGPSFREGKVNQENKSCQNLDRVQKLYSVDELSI 760

Query: 1799 PLDTHPVSSCSPCI-GQDRLGQLYY-PCKKKTGQ--------------TKIDPENHLS-- 1924
               ++     SP     DR G L Y PC++  G               T ++ E HL+  
Sbjct: 761  SEASNFPERLSPIAHSSDRNGTLSYKPCERSDGPHSEQSRDIASTVLVTTLEREVHLAPG 820

Query: 1925 --SHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLEEGS 2098
              S+A    DG S++++  +K    SS +L    V+DD               A L +  
Sbjct: 821  KQSNASNEVDGLSTVSNSWSKD---SSRSLDV--VLDD------------LPGAILVDKK 863

Query: 2099 MDSFKQGEDETLLMEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQDLQDXXXXXX 2278
             DS  +GE  TL+ E         + V  E      DK  D     +H    Q       
Sbjct: 864  NDS--EGEPSTLVSEK-------KSEVETELCSMVEDKKNDLEAKSLH----QSIEIVDS 910

Query: 2279 XXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFGCESTIQESFTKEVSE 2458
                   ++ +  S +++  ++  +      +N A   T  ++          FT    +
Sbjct: 911  SIPVVQSSVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFT----Q 966

Query: 2459 SALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 2638
             +LDEE+ +L QE  +LGDEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ
Sbjct: 967  VSLDEELLILGQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 1026

Query: 2639 CAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIR 2818
            CAYME+ N+VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE E+GLTREKL+R
Sbjct: 1027 CAYMELTNIVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKEIGLTREKLMR 1086

Query: 2819 MAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKT------ 2980
            MA+LLGSDYTEGVSGIGIVNAIEVV+AFPEEDGL KF+EWIESPDP+ILGKL        
Sbjct: 1087 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPAILGKLNVQEGSSA 1146

Query: 2981 ---------KSCKASNNNADGTGNNVEE-SVCEGNISRQPKDQPDANDGSKIKEIFMDKH 3130
                     K   ++  +   +G+ +E  S  + NIS+  K+    +    IK+IFMDKH
Sbjct: 1147 RKRGSKFSDKDVISAKTSMRDSGSPIEGLSSFDQNISQADKNTQSTDCIDDIKQIFMDKH 1206

Query: 3131 RNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKAD 3310
            RNVSKNWHIPSSFPS++VIS Y SPQVD+STE F+WG+PDLF+LRKLCW+KFGW +QK+D
Sbjct: 1207 RNVSKNWHIPSSFPSEAVISEYCSPQVDKSTEPFTWGRPDLFVLRKLCWDKFGWGSQKSD 1266

Query: 3311 ELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQEL 3490
            +LL+PVL+EY K ETQLRLEAFYTFNERFAKIRS+RIKKAVKGITG  SSEL+D+ MQ++
Sbjct: 1267 DLLLPVLREYEKRETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDAMQQV 1326

Query: 3491 SKSRTKGRLR-------SSGLKESKLE--VHSDGTNVRGRKVSKPSRQ---ENTEIKVTQ 3634
            SKSR + R+         SG   +  E  V    +    + V KPSR+   + +  K T 
Sbjct: 1327 SKSRKRRRVSPVKSGDDKSGEPSNWKEDIVSQRQSKSMEKSVPKPSRKRPPQTSPGKSTP 1386

Query: 3635 TDGHAALH---TSFQVGGNGKSGLHADVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3805
                 A     T+ Q  G G+   H                                   
Sbjct: 1387 EQPPRAARRRKTNKQSPGIGRRKGHG------------------------------ARRR 1416

Query: 3806 XXQEEAEFDSTEFAEASSSDESMHSDELGKVLKFPDKKPASRRSTRQRKHVLYAEGEVDV 3985
              +   +F+ +E + +  +  + + +  G+ L   D+    RRS R R  V Y   +++ 
Sbjct: 1417 RRKASPDFEQSETSSSGGNSGNDYQEVDGEKL---DRPQQVRRSMRTRNPVNYNVNDLE- 1472

Query: 3986 DEVCCSSIPIDGXXXXXXXXXXXXXXIWGEVVAGDASGVD-QVGKQSHLEERCFKDYLLS 4162
            DEV  S+                      +  A D +  +    +    EE   +DYL  
Sbjct: 1473 DEVGLSN------------KESSCEEAMEQEAADDLNEENPSEARDPTFEEDFSRDYLER 1520

Query: 4163 GGGFCEDESD 4192
            GGGFC DE +
Sbjct: 1521 GGGFCMDEKE 1530



 Score =  139 bits (349), Expect = 2e-29
 Identities = 90/223 (40%), Positives = 126/223 (56%), Gaps = 4/223 (1%)
 Frame = +2

Query: 2   QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
           QF+KA+RD++ G+  R AHLLGF RRI KLL+L+ +PVFVFDGATP LKRRT+ AR R R
Sbjct: 37  QFMKAMRDEK-GEMVRNAHLLGFFRRICKLLYLKTKPVFVFDGATPVLKRRTVIARRRQR 95

Query: 182 DQARSKIRKTAEKLLLNHLKTKRLEELAAEI--RRTDSKSNSKGKQVARDGDDGAATPNQ 355
           + +++KIRKTAEKLLLNHLK  RL+ELA ++  +R   K+N+KG++V+ D    A   N 
Sbjct: 96  ENSQAKIRKTAEKLLLNHLKQMRLKELAKDLEDQRKKQKNNAKGRKVSSDKPYDA---NI 152

Query: 356 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGGIDPTVLASLP 535
                                                   +I P  +DG IDP VLA+LP
Sbjct: 153 VGCNAVELTNSDHVNLKEKSEMPIPAEDGGGDENEDEYEEIILP-EIDGNIDPDVLAALP 211

Query: 536 PSMQLDLLVQ--MRERLMAENRQRYQKIKKAPSKFSELQIQSY 658
            SMQ  LL Q   +++ +  N      ++++ ++   +   SY
Sbjct: 212 QSMQRQLLSQNNAKDKKIFSNDLDQSNMERSNAEHDPMASSSY 254


>gb|EOY02334.1| DNA-repair protein UVH3, putative isoform 2, partial [Theobroma
            cacao]
          Length = 1239

 Score =  768 bits (1983), Expect = 0.0
 Identities = 508/1089 (46%), Positives = 636/1089 (58%), Gaps = 75/1089 (6%)
 Frame = +2

Query: 476  MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQS 655
            MI P  M G +DP VLA+LPPS+QLDLLVQMRE+LMA NRQ+YQK+KKAP +FSELQIQS
Sbjct: 73   MILPA-MHGNVDPAVLAALPPSLQLDLLVQMREKLMAVNRQKYQKVKKAPEQFSELQIQS 131

Query: 656  YLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRN 835
            YLKTVAFRREIDEVQ+ A GRG+ GVQTSRIASEAN+EFIFSSSFTGDKQ LTSA   R+
Sbjct: 132  YLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSARKERD 191

Query: 836  GDTDHNASKNR--GSLTSASCSIGRSNSAVGSSSIAKSPKDF-GPGVETYYDDXXXXXXX 1006
             D       N   G L S   SI +SN  V + S+   P       V TY D+       
Sbjct: 192  EDKQQEIHSNHPSGFLNSVK-SICKSN--VVTESVPNEPTSAPDEDVGTYLDERGQVRVS 248

Query: 1007 XXXXXXXXMTRDLQRNLDLMKEYEEEKFGENIGNEVH---DTSKVFSGSTFSAKASACSE 1177
                    MTRDLQRNLDLMKE E+E+   N    V    D +++ +    S+       
Sbjct: 249  RVRGMGIRMTRDLQRNLDLMKEIEQERTNSNKDMNVQSVPDRNRIGTSKNSSS------- 301

Query: 1178 ENQDLIFENTGISSRGATAHGFDEPSVVGNKAAIEVSFVEDDSERK--DTVDELFLHLVS 1351
            ENQ L   + G +      +  ++ S    +A +E++F EDD   K  D  D++F  L +
Sbjct: 302  ENQFLKTSHDG-NCESVNLNESNQQSAFKTEACMEITF-EDDGRNKFFDDDDDIFARLAA 359

Query: 1352 GSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENT--ITPNERNKQNDSISAEQIHPED 1525
            G     P  E                   G+ E N   +      K N S     I  E 
Sbjct: 360  GDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEGNWDGVAHCMDAKNNPSYKESNISDES 419

Query: 1526 DEVDWEEGVCQTPRVVSDSQGKHENAVSI--GLLEEEADIQEAIRRSLED---------- 1669
             EV+WEE     P+    S G  E+ V +  G LEEEAD+QEAIRRSL D          
Sbjct: 420  -EVEWEEEPSDAPK---SSSGPVESGVMLSKGYLEEEADLQEAIRRSLTDIGAKKSNYFP 475

Query: 1670 --FERPKSSGILPDD----PNTELTCGG-----------KESIQSMKVSAKERNVGSTHM 1798
              FE+ K  G   D+    P+ + +  G            +S Q++    K  +V    +
Sbjct: 476  SEFEKLKKFGKNMDEGFGSPHGKSSMDGPSFREGKVNQENKSCQNLDRVQKLYSVDELSI 535

Query: 1799 PLDTHPVSSCSPCI-GQDRLGQLYY-PCKKKTGQ--------------TKIDPENHLS-- 1924
               ++     SP     DR G L Y PC++  G               T ++ E HL+  
Sbjct: 536  SEASNFPERLSPIAHSSDRNGTLSYKPCERSDGPHSEQSRDIASTVLVTTLEREVHLAPG 595

Query: 1925 --SHAGYRSDGESSLNDETNKGLLVSSHNLKTQSVVDDGSLGTLQTPTAKSVQACLEEGS 2098
              S+A    DG S++++  +K    SS +L    V+DD               A L +  
Sbjct: 596  KQSNASNEVDGLSTVSNSWSKD---SSRSLDV--VLDD------------LPGAILVDKK 638

Query: 2099 MDSFKQGEDETLLMEPTEAFVGLSANVNLEANCSSLDKAPDTVVTDMHLQDLQDXXXXXX 2278
             DS  +GE  TL+ E         + V  E      DK  D     +H    Q       
Sbjct: 639  NDS--EGEPSTLVSEK-------KSEVETELCSMVEDKKNDLEAKSLH----QSIEIVDS 685

Query: 2279 XXXXXXXALCQEKSVVNVALDIDKENKQNLAINNAISTTGESSFGCESTIQESFTKEVSE 2458
                   ++ +  S +++  ++  +      +N A   T  ++          FT    +
Sbjct: 686  SIPVVQSSVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFT----Q 741

Query: 2459 SALDEEISLLRQERKDLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 2638
             +LDEE+ +L QE  +LGDEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ
Sbjct: 742  VSLDEELLILGQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 801

Query: 2639 CAYMEMKNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIR 2818
            CAYME+ N+VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE E+GLTREKL+R
Sbjct: 802  CAYMELTNIVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKEIGLTREKLMR 861

Query: 2819 MAMLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKT------ 2980
            MA+LLGSDYTEGVSGIGIVNAIEVV+AFPEEDGL KF+EWIESPDP+ILGKL        
Sbjct: 862  MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPAILGKLNVQEGSSA 921

Query: 2981 ---------KSCKASNNNADGTGNNVEE-SVCEGNISRQPKDQPDANDGSKIKEIFMDKH 3130
                     K   ++  +   +G+ +E  S  + NIS+  K+    +    IK+IFMDKH
Sbjct: 922  RKRGSKFSDKDVISAKTSMRDSGSPIEGLSSFDQNISQADKNTQSTDCIDDIKQIFMDKH 981

Query: 3131 RNVSKNWHIPSSFPSDSVISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKAD 3310
            RNVSKNWHIPSSFPS++VIS Y SPQVD+STE F+WG+PDLF+LRKLCW+KFGW +QK+D
Sbjct: 982  RNVSKNWHIPSSFPSEAVISEYCSPQVDKSTEPFTWGRPDLFVLRKLCWDKFGWGSQKSD 1041

Query: 3311 ELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQEL 3490
            +LL+PVL+EY K ETQLRLEAFYTFNERFAKIRS+RIKKAVKGITG  SSEL+D+ MQ++
Sbjct: 1042 DLLLPVLREYEKRETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDAMQQV 1101

Query: 3491 SKSRTKGRL 3517
            SKSR + R+
Sbjct: 1102 SKSRKRRRV 1110


>ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citrus clementina]
            gi|557549063|gb|ESR59692.1| hypothetical protein
            CICLE_v10014025mg [Citrus clementina]
          Length = 1699

 Score =  761 bits (1966), Expect = 0.0
 Identities = 527/1313 (40%), Positives = 703/1313 (53%), Gaps = 59/1313 (4%)
 Frame = +2

Query: 476  MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQS 655
            MI P  M G +DP VLA+LPPSMQLDLLVQMRE+LMAENRQ+YQK+KKAP KFSELQIQ+
Sbjct: 311  MILPA-MTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQA 369

Query: 656  YLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRN 835
            YLKTVAFRREIDEVQK A GRG+ GVQTSRIASEAN+EFIFSSSFTGDKQ LTS+ +   
Sbjct: 370  YLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGK 429

Query: 836  GD------TDHNAS---KNRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDX 988
             D      ++H  S    N  S+  ++ S    +++V      +S K F   VETY D+ 
Sbjct: 430  KDEQQQIPSEHPVSDSVNNGASIDKSNFSSTDQSNSVTKLGPGESRKSFADDVETYLDER 489

Query: 989  XXXXXXXXXXXXXXMTRDLQRNLDLMKEYEEEKFGENIGNEVHDTSKVFSGSTFSAKASA 1168
                          MTRDLQRNL +MKE E+++     GN +     + + +      + 
Sbjct: 490  GRVRLSKVRAMGIRMTRDLQRNLAMMKEIEQDRPN---GNNITGAGSMLTLNETGTSNAV 546

Query: 1169 CSEENQDLIFENTGISSRGATAHGFD--EPSVVGNKAAIEVSFVEDDSERKDTVDELFLH 1342
             SE+++   F  T +     +    +  + S + +  ++E+SF ++     D  D++F H
Sbjct: 547  PSEKSK---FIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENNCDDDDDIFAH 603

Query: 1343 LVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEE--NTITPNERNKQNDSISAEQIH 1516
            L +G   I P +                    G  E   ++++ +     N  ++ E+  
Sbjct: 604  LAAGKPVIFPNSPRAH----SSISVSDSDWEEGTTERKGSSLSDDANAGINPPLNLEEGG 659

Query: 1517 PEDD-EVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSLEDFERPKSSG 1693
              D+ EV+WEEG    P+       + E  VS   +EEEA++QEAIRRSL D    K + 
Sbjct: 660  ISDESEVEWEEGPSCAPKSSLSFPAESEKTVSN--IEEEANLQEAIRRSLLDVCIEKPNY 717

Query: 1694 ILPDDPNTELTCGGKESIQSMKVSAKERNVGSTHMPLDTHPVSSCSPCIGQDRLGQL--- 1864
             L +    E    G+ +     +  +E N+   +   ++      S C   D LG+L   
Sbjct: 718  ALSEHNKCENL--GENACDGTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTV 775

Query: 1865 ------------------YYPCKKKTGQTKIDPENHLSSHAGYRSDGESSLNDETNKGLL 1990
                              Y P  + + + ++           Y        ND  N G  
Sbjct: 776  GGINNSEVIGSLGRELKLYEP--RNSDEKEMLINKPFEKDNSYFEQSRQGANDGANDGRS 833

Query: 1991 VSS----HNLKTQSVVDDGSL--GTLQTPTAKSVQACLEEGSMDSFKQGEDETLLMEPTE 2152
            + S     +  T   + +  L  G   + +AK  +    +      +    + +  + + 
Sbjct: 834  LCSDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVDAVFEDSSI 893

Query: 2153 AFVGLSANVNLEANCSSL--DKAPDTVVTDMHLQDLQDXXXXXXXXXXXXXALCQEKSVV 2326
            A +      N EA  S L  DK  +  V   H    +               +    +  
Sbjct: 894  AILDEDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNAS 953

Query: 2327 NVALDIDKENKQNLAINNAISTTGESSFGCESTIQESFTKEVSESALDEEISLLRQERKD 2506
                DI++++ +    +  +  + +++    +   E+   E +E  L+EE+ +L  E   
Sbjct: 954  IYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMY 1013

Query: 2507 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTD 2686
            LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ NLVDGVVTD
Sbjct: 1014 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 1073

Query: 2687 DSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGI 2866
            DSDVFLFGARSVYKNIFDDRKYVETYFM+DIE +LGLTREKLIRMA+LLGSDYTEG+SGI
Sbjct: 1074 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 1133

Query: 2867 GIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKTKSCKASNNNADGTGN---NVEE 3037
            GIVNAIEVV+AFPEEDGL KF+EWIESPDP+ILGK   ++  +S       G+   N  +
Sbjct: 1134 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAK 1193

Query: 3038 SVCEG------NISRQPKDQPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSVISAYI 3199
               EG      +IS+  +D+  A     +K+IFMDKHRNVSKNWHIPSSFPS++VISAY 
Sbjct: 1194 HSVEGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHRNVSKNWHIPSSFPSEAVISAYF 1253

Query: 3200 SPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLRLEAFY 3379
             PQVD+STESFSWGKPDLF+LRK CWEKFGW   K++ELLVPVLKEY K ETQLRLEAFY
Sbjct: 1254 CPQVDKSTESFSWGKPDLFVLRKFCWEKFGWGGDKSNELLVPVLKEYEKRETQLRLEAFY 1313

Query: 3380 TFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQELSKSRTKGRLR--SSGLKESKLEV 3553
            TFNERFAKIRS+RIKKAVKGITG  S  LMD+  QE+SKSR K +     +G   S+   
Sbjct: 1314 TFNERFAKIRSKRIKKAVKGITGNQSLLLMDDAGQEVSKSRNKRKNNGLENGSNRSQKAP 1373

Query: 3554 HSDGTNVRG--RKVSKPSRQENTEIKVTQTDGHAALHTSFQV--GGNGKSGLHADVQXXX 3721
                 +V G    + K S+ ++ + KV +    A +    ++   G G++  +       
Sbjct: 1374 KKGEESVSGAQNNMEKSSQSQSRKRKVLEKFVLAEMENPERLTPAGGGRNANNV------ 1427

Query: 3722 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEEAEFDSTEFAEASSSDESMHSDELGKVL 3901
                                           E++E  S++  +  S D   +  E     
Sbjct: 1428 --------FRGNRRGKGQRVGRGRGRGRLCAEQSETSSSD--DIGSDDTQEYYSE----- 1472

Query: 3902 KFPDKKPASRRSTRQRKHVLYAEGEVDVDEVCCSSIPIDGXXXXXXXXXXXXXXIWGEVV 4081
            KF  ++   RRSTR RK V Y   + ++ +V      I                + G  V
Sbjct: 1473 KFEGQQEV-RRSTRSRKPVDYNVDDPEIADVG----KILSNKESSNEEEAKQDSVHG--V 1525

Query: 4082 AGDASGVDQVGKQSHLEERCF-KDYLLSGGGFCEDESDELGVGGQHVASPVRD 4237
             G+AS      KQ   ++    KDY+  GGGFC D+ +     GQ   SP  D
Sbjct: 1526 TGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEI----GQPSVSPCDD 1574



 Score =  140 bits (352), Expect = 7e-30
 Identities = 85/197 (43%), Positives = 114/197 (57%), Gaps = 9/197 (4%)
 Frame = +2

Query: 2   QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
           QF+KA+RD++ G+  R AHL+GF RRI KLL+L+ +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37  QFMKAMRDEK-GEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQR 95

Query: 182 DQARSKIRKTAEKLLLNHLKTKRLEELAAEI--RRTDSKSNSKGKQVARD-------GDD 334
           + A++KIRKTAEKLL+NHLKT RL+ELA ++  +R   K + +GK+V  D        D 
Sbjct: 96  ENAQAKIRKTAEKLLINHLKTMRLKELALDLENQRQIQKRDPEGKKVLSDMENCSERTDG 155

Query: 335 GAATPNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGGIDP 514
            +A+ +++                                        I   TM G +DP
Sbjct: 156 VSASDDKENLDEMLAASIAAEANESSSKSASKSATANLLEEDGDEDEEIMLPTMGGNVDP 215

Query: 515 TVLASLPPSMQLDLLVQ 565
            V A+LPPSMQ  LLV+
Sbjct: 216 AVFAALPPSMQHQLLVR 232


>ref|XP_004304600.1| PREDICTED: uncharacterized protein LOC101313912 [Fragaria vesca
            subsp. vesca]
          Length = 1637

 Score =  760 bits (1962), Expect = 0.0
 Identities = 547/1348 (40%), Positives = 711/1348 (52%), Gaps = 70/1348 (5%)
 Frame = +2

Query: 476  MIYPTTMDGGIDPTVLASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQS 655
            MI P  M G +DP VLA+LPPSMQLDLLVQ+RERLMAENRQ+YQK+KK P KFSELQIQS
Sbjct: 312  MILPA-MHGDVDPAVLAALPPSMQLDLLVQIRERLMAENRQKYQKVKKDPEKFSELQIQS 370

Query: 656  YLKTVAFRREIDEVQKCATGRGLGGVQTSRIASEANKEFIFSSSFTGDKQNLTSAGIGRN 835
            YLKTVAFRREID VQK A+GR   GVQTSRIASE+++EFIFSSSFTGDKQ L +A   R+
Sbjct: 371  YLKTVAFRREIDHVQKAASGRAFSGVQTSRIASESHREFIFSSSFTGDKQVLAAARAERS 430

Query: 836  GDTDHNASKNRGSLTSASCSIGRSNSAVGSSSIAKSPKDFGPGVETYYDDXXXXXXXXXX 1015
            GD +  A K   S    S     S   V  S+  +S + F   +ETY D+          
Sbjct: 431  GD-EQQAPKEHSSNVKNSVL---STDNVTGSTPEESRRVFDDNIETYLDERGNVRVSRVR 486

Query: 1016 XXXXXMTRDLQRNLDLMKEYEEEKFGENIGNEVHDTSKVFSGSTFSAKASACSEENQDLI 1195
                 MTRDLQRNLDLMKE E+EK     GN++ D   + + +   +     +  N+ L+
Sbjct: 487  AMGIRMTRDLQRNLDLMKEMEQEKTN---GNKIIDAGNMLTSNNIGSILRR-TPGNETLV 542

Query: 1196 ---------FENTGISSRGATAHGFDEPSVVGNK-------------AAIEVSFVEDDSE 1309
                     F+NTG+       +   E S+  N                IE+S +EDD +
Sbjct: 543  ETSPGDNGNFDNTGVPKSHPGQNKVGESSLGDNNLNERNNHCISKFGTPIEIS-IEDDGD 601

Query: 1310 RK--DTVDELFLHLVSGSSTIKPLTEGTFLXXXXXXXXXXXXXXXGVVEENTITPNERNK 1483
             K  D  D+LF  LV+ S  +   +    L               G +  ++   +   K
Sbjct: 602  AKPFDAEDDLFARLVA-SDPVTISSANDALKRQFPDSNSDSDWEEGTLTSSSFPVDSELK 660

Query: 1484 QNDSISAEQIHPEDDEVDWEEGVCQTPRVVSDSQGKHENAVSIGLLEEEADIQEAIRRSL 1663
             N S + +    +D EV+WEEG        S   G+     S G +EEEAD+QEAI+RSL
Sbjct: 661  IN-STNLKANDSDDSEVEWEEGFSGITENTSSYPGRE--TTSKGYIEEEADLQEAIKRSL 717

Query: 1664 EDFERPKSSGILPDDPNTELTCGGKESIQSMKVSAKERNVGSTH---MPLDTHPVSSCSP 1834
                                     E I+  K S       S H    PL  + V   S 
Sbjct: 718  -------------------------EDIEYEKCS----RASSEHELLKPLGEN-VQKASE 747

Query: 1835 CIGQDRLGQLYYPCKKKTGQTKIDPENHLSSHAGYRSDGESSLNDETNKGLLVSSHNLKT 2014
            CI ++                 +DP    +       DG + LN     G   SS    T
Sbjct: 748  CIDRET--------------KMVDPATQQNKSV---VDGLAELNSIRYLG---SSSEQVT 787

Query: 2015 QSVVDDGSL-GTLQ-----TPTAKSVQACLEEGSMDSFKQGEDETLLMEPTEAFVGLSAN 2176
            Q   +  +L G +Q     TP++      + E  + +  +G              GLSA 
Sbjct: 788  QDASERANLHGEMQFTVCITPSSTKEVNVIREQVLGTLNEGG-------------GLSAV 834

Query: 2177 VNLEANCSSLDKAPDTVVTDM-HLQDLQDXXXXXXXXXXXXXALCQEKSVVNVALDIDKE 2353
             N+  N   +D A DT+  D+ H  D Q               +  + S +  ++  +K 
Sbjct: 835  PNVGKNID-VDNA-DTLCGDITHCADDQKNDTEIESSCRFVEMV--KPSSIGESMP-NKM 889

Query: 2354 NKQNLAINNAISTTGESSFGCE--STIQESFTK-------EVSESALDEEISLLRQERKD 2506
             +++    N +  T   SF  E    + +S  K       EV+++ L+EE+ +L QE  D
Sbjct: 890  TEESGDYRNWVKETSRDSFPQEIDQNLDKSPVKGIGDADIEVTKANLEEEMLILDQECMD 949

Query: 2507 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMKNLVDGVVTD 2686
            LGDE+++LERN ESVSSEM+ ECQELLQ+FG+PYIIAPMEAEAQCAY+E+ NLVDGVVTD
Sbjct: 950  LGDERRRLERNVESVSSEMYTECQELLQIFGIPYIIAPMEAEAQCAYLELANLVDGVVTD 1009

Query: 2687 DSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMAMLLGSDYTEGVSGI 2866
            DSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMA+LLGSDYTEGVSGI
Sbjct: 1010 DSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIRMALLLGSDYTEGVSGI 1069

Query: 2867 GIVNAIEVVHAFPEEDGLCKFKEWIESPDPSILGKLKTKSCKASNNNADG-TGNN----- 3028
            GIVNAIEVV+AFPEEDGL  F+ WIESPDP+ILGKL T+S  ++        G N     
Sbjct: 1070 GIVNAIEVVNAFPEEDGLHTFRNWIESPDPTILGKLDTESASSTRKRGSSKLGKNDMNTK 1129

Query: 3029 --------VEESVCEGNISRQPKDQPDANDGSKIKEIFMDKHRNVSKNWHIPSSFPSDSV 3184
                    +E+S C+    +Q  D  +      +K+IFMDKHR VSKNWHIP SFPS++V
Sbjct: 1130 SSMDEVSPLEKSNCQDQEHKQSDDLTE-----DVKKIFMDKHRKVSKNWHIPLSFPSEAV 1184

Query: 3185 ISAYISPQVDQSTESFSWGKPDLFLLRKLCWEKFGWSNQKADELLVPVLKEYNKHETQLR 3364
             SAY  PQVD+STE F+WGKPD  +LR+LCWEKFGW +QK+DELLVPVLKEYNK ETQLR
Sbjct: 1185 TSAYTCPQVDKSTEPFTWGKPDHLVLRRLCWEKFGWVSQKSDELLVPVLKEYNKRETQLR 1244

Query: 3365 LEAFYTFNERFAKIRSQRIKKAVKGITGTSSSELMDNHMQELSKSRTKGRLRS--SGLKE 3538
            LEAFYTFNERFAKIRS+RIKKAVKGITG   SELM+   +E S SR K  + +  +G+  
Sbjct: 1245 LEAFYTFNERFAKIRSKRIKKAVKGITGDEPSELMNAAAEEGSNSRKKRSINTDEAGIDN 1304

Query: 3539 S-KLEVHSDGTNVRGRKVSK-PSRQENTEIKVTQTDGHAALHTSFQVGGNGKSGLHADVQ 3712
            S KL V ++ + VR +  SK  S ++ +  + T   G     T     G GK        
Sbjct: 1305 SDKLSVRTEKSTVRNQSNSKGKSTRKQSSKRQTAEGGQTNRKTDANGRGRGKG------- 1357

Query: 3713 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEEAEFDSTEFAEASSSDESMHSDELG 3892
                                             + + + DS+     ++ ++   +DEL 
Sbjct: 1358 -----------------------RGRGTSRVLGRGKRKVDSSSPESENTCNDGSEADELE 1394

Query: 3893 KVLKFPDKKPASRRSTRQRKHVLYAEGEVDVDEVCCSSIPIDGXXXXXXXXXXXXXXIWG 4072
              +   +     RRS R RK V Y   ++++D+       +D               ++ 
Sbjct: 1395 IPMATFESSEEVRRSGRSRKPVNYRFNDMEIDD-------LDHTESRVSDIEAGKQVVFN 1447

Query: 4073 EVVAGDASGVDQVGKQSHL-----EERCFKDYLLSGGGFC--EDESDELGVG--GQHVAS 4225
              ++ +   V    KQ        EE   K YL +GGGFC  EDE+ E G+   GQ+  +
Sbjct: 1448 NGISDEVVSVVNENKQKSAGKLSPEENHSKHYLEAGGGFCHSEDETSEPGLSNVGQYFQA 1507

Query: 4226 PVRDSVGPLEEQTQISGSLPGHDDLNSS 4309
             V       E   QI G + G ++ N +
Sbjct: 1508 DVS------EGNIQIIGRISGDENENGT 1529



 Score =  135 bits (339), Expect = 2e-28
 Identities = 91/237 (38%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
 Frame = +2

Query: 2   QFIKAIRDDRSGDAPRQAHLLGFLRRIAKLLFLRARPVFVFDGATPALKRRTLAARSRLR 181
           QF+KA+RD++ G+  R AHLLGF RRI KLL+LR +PVFVFDG TPALKRRT+ AR R R
Sbjct: 37  QFMKAMRDEK-GEMVRNAHLLGFFRRICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQR 95

Query: 182 DQARSKIRKTAEKLLLNHLKTKRLEELAAEIR----RTDSKSNSKGKQVARDGDDGAATP 349
           + +++K+RKTAEKLLLNHLK+ RL+ELA +I+        K+   G       D      
Sbjct: 96  ENSQAKLRKTAEKLLLNHLKSMRLKELAEDIKNQRQEVSEKAGVSGSSDLEVNDAALKRC 155

Query: 350 NQQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIYPTTMDGGIDPTVL 523
           NQ+                                         +I P  M G +DP VL
Sbjct: 156 NQEKLDEMLVASIVAEEEGGLTNSLPSTFGAVPCEVDDEEEDEELILP-EMHGDVDPAVL 214

Query: 524 ASLPPSMQLDLLVQMRERLMAENRQRYQKIKKAPSKFSELQIQSYLKTVAFRREIDE 694
           A+LPPSMQ  LL Q  ++    N  + ++I   P++   +  +   K+ A  R +D+
Sbjct: 215 AALPPSMQRGLLAQTNKQ---ANDAKGKRIMSDPTELVGVNSE---KSDAVLRNVDQ 265