BLASTX nr result
ID: Stemona21_contig00011999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00011999
(3412 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 1378 0.0
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1372 0.0
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 1367 0.0
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 1367 0.0
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1363 0.0
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 1363 0.0
ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|... 1357 0.0
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1353 0.0
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1343 0.0
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic... 1338 0.0
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 1335 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1335 0.0
emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 1335 0.0
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 1333 0.0
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 1326 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1317 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1316 0.0
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 1315 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1315 0.0
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1314 0.0
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 1378 bits (3566), Expect = 0.0
Identities = 673/824 (81%), Positives = 734/824 (89%), Gaps = 4/824 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELLADMCEQKLAPNLPY+KSLFLGWFEPLRDQI+TEQE DPGSRA++GPYF+
Sbjct: 153 AAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIVTEQELVADPGSRASHGPYFN 212
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+I+RFLEKTRKKS K
Sbjct: 213 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKKSNK 272
Query: 362 DTQNED-ADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGS 529
+ + E+ A GD A ++ LRKKVT+LMKKQKL QVR IVK QD+S+PWGQ+ QAKVGS
Sbjct: 273 EMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGS 332
Query: 530 RLIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQG 709
RLIEL M+TA+IQPP Q ++G PDIRPAFRH +RTV KEQQK RRYGVI+CDPLVRQG
Sbjct: 333 RLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLVRQG 392
Query: 710 LDRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQK 889
LDRTA+HMVIPYMPML+PP+ WTGYDKGAHLFLPSY MRTHGARQQREA+KRAP++Q+Q
Sbjct: 393 LDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQS 452
Query: 890 VFQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXX 1069
VF+AL+TLG+TKWRVNKRVLSIVDRIWSSGG LADLVDR DVP+PEKPDTEDE I
Sbjct: 453 VFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIKNWK 512
Query: 1070 XXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 1249
ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS
Sbjct: 513 WHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 572
Query: 1250 DLCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADR 1429
DLCRG+LEFAEGRPLGKSGL WLKIH+ANLYAGGVDKLSYDGR+AFTENHL++IFDSADR
Sbjct: 573 DLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADR 632
Query: 1430 PLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRD 1609
PLEG+RWWLGAEDPFQCLAVC+NL EALRSSSPETTISH+PVHQDGSCNGLQHYAALGRD
Sbjct: 633 PLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRD 692
Query: 1610 KLGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVK 1789
KLGAIAVNLVAG+KPADVY+GIA RVL+IMR DAQKDP+ D + RARL+VDQVDRKLVK
Sbjct: 693 KLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKLVK 752
Query: 1790 QTVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSI 1969
QTVMTSVYGVTYVGAR+QIKRRLKERG+ D++E+FGASCYAAK TLTALGEMFQAAR I
Sbjct: 753 QTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQAARGI 812
Query: 1970 MSWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKR 2149
M+WLGDCAKVIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKR
Sbjct: 813 MNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKR 872
Query: 2150 QRTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVEL 2329
QRTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHACDVD MN+ILREKFVEL
Sbjct: 873 QRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVEL 932
Query: 2330 YETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
Y+TPILEN RGDFD+K+VL S YFFN
Sbjct: 933 YDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESPYFFN 976
>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Setaria italica]
Length = 1005
Score = 1372 bits (3550), Expect = 0.0
Identities = 670/823 (81%), Positives = 732/823 (88%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRDQI EQE + GSRA++GPYF+
Sbjct: 183 AAKEYRELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDQIAAEQELVANRGSRASHGPYFN 242
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+IHRFLEKTRKKS K
Sbjct: 243 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHRFLEKTRKKSNK 302
Query: 362 DTQNEDA--DGDAAAKEF-LRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ +NE+ D D A ++ LRKKVT+LMKKQKL QVRKIVK QDDS+PWGQ+A AKVGSR
Sbjct: 303 EKENEEEIFDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSR 362
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIEL +ETA+IQPP Q ++G PDIRPAFRH +RTV KEQQK RRYGVI+CDPLVRQGL
Sbjct: 363 LIELFIETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKEQQKHSRRYGVIKCDPLVRQGL 422
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP+ WTGYDKGAHLFLPSY MRTHGARQQREA+KRAP++Q+Q V
Sbjct: 423 DRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSV 482
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+AL+TLG+TKWRVNKRVLSI+DRIWSSGG LADLVDR DVP+PEKPDTEDE +
Sbjct: 483 FEALNTLGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETVLKKWRW 542
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
NSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 543 HTRSVKKGNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 602
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEFAEGRPLG+SGLRWLKIH+ANLYAGGVDKLSY GR+AF ENHL++IFDSADRP
Sbjct: 603 LCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSADRP 662
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWLGAEDPFQCLAVC+NL EALRS SPE TISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 663 LEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALGRDK 722
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVYSGIA RV++IMR+D+QKDP+TD +A RARL++DQVDRKLVKQ
Sbjct: 723 LGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKLVKQ 782
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKERG+ ADD+E+FGASCYAAK TLTALGEMFQAARSIM
Sbjct: 783 TVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIM 842
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 843 NWLGDCAKVIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 902
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 903 RTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELY 962
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+TPILEN RGDFD+KDVL S YFFN
Sbjct: 963 DTPILENLLESFEKSFPKLKFPPLPERGDFDMKDVLESPYFFN 1005
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 1367 bits (3539), Expect = 0.0
Identities = 668/823 (81%), Positives = 729/823 (88%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AA+EY+ELLADMC+QKLAPNLPYVKSLFLGWFEPLRDQII EQE + G+RA++ YF+
Sbjct: 195 AAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFN 254
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+IH+FLEKT+KKS K
Sbjct: 255 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNK 314
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ NE+ GD A +E LRKKVT+LMKKQK+ QVR IVK QD+SKPWGQ+A AKVGSR
Sbjct: 315 EMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSR 374
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIEL++ETAYIQPP Q A+GPPDIRPAF H +RTV +EQQK RRYGVI+CDPLVRQGL
Sbjct: 375 LIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGL 434
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP++WTGYDKGAHLFLPSY MRTHGARQQR+A++RAP++Q+Q V
Sbjct: 435 DRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSV 494
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+AL+TLG+TKWRVNKRVLSIVDRIWSSGG LADLVDR DV +PEKPDTEDE ++
Sbjct: 495 FEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRW 554
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
ENSERHSQRCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 555 TLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSD 614
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEFAEGRPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR+AFTENHL+DIFDSADRP
Sbjct: 615 LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRP 674
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWLGAEDPFQCLAVCINL EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 675 LEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDK 734
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVY+GIA RV++IM+ DA KDPATD +A RARLL+DQVDRKLVKQ
Sbjct: 735 LGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQ 794
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKER + DDSE+F ASCYAAK TLTALGEMFQAARSIM
Sbjct: 795 TVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIM 854
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 855 NWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 914
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 915 RTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELY 974
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+TPILEN RGDFDL DVL S YFFN
Sbjct: 975 DTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 1017
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 1367 bits (3539), Expect = 0.0
Identities = 668/823 (81%), Positives = 729/823 (88%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AA+EY+ELLADMC+QKLAPNLPYVKSLFLGWFEPLRDQII EQE + G+RA++ YF+
Sbjct: 161 AAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFN 220
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+IH+FLEKT+KKS K
Sbjct: 221 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNK 280
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ NE+ GD A +E LRKKVT+LMKKQK+ QVR IVK QD+SKPWGQ+A AKVGSR
Sbjct: 281 EMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSR 340
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIEL++ETAYIQPP Q A+GPPDIRPAF H +RTV +EQQK RRYGVI+CDPLVRQGL
Sbjct: 341 LIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGL 400
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP++WTGYDKGAHLFLPSY MRTHGARQQR+A++RAP++Q+Q V
Sbjct: 401 DRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSV 460
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+AL+TLG+TKWRVNKRVLSIVDRIWSSGG LADLVDR DV +PEKPDTEDE ++
Sbjct: 461 FEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRW 520
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
ENSERHSQRCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 521 TLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSD 580
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEFAEGRPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR+AFTENHL+DIFDSADRP
Sbjct: 581 LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRP 640
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWLGAEDPFQCLAVCINL EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 641 LEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDK 700
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVY+GIA RV++IM+ DA KDPATD +A RARLL+DQVDRKLVKQ
Sbjct: 701 LGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQ 760
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKER + DDSE+F ASCYAAK TLTALGEMFQAARSIM
Sbjct: 761 TVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIM 820
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 821 NWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 880
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 881 RTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELY 940
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+TPILEN RGDFDL DVL S YFFN
Sbjct: 941 DTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 983
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X2 [Oryza brachyantha]
Length = 839
Score = 1363 bits (3529), Expect = 0.0
Identities = 669/823 (81%), Positives = 724/823 (87%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELLADMCE KLAPNLPYVKSLFLGWFEPLRDQII EQ+ + +RA++ YF+
Sbjct: 17 AAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQDLVCERRARASHARYFN 76
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV++H+FLEK +KK K
Sbjct: 77 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRLHKFLEKPKKKRSK 136
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ NE+ G A +E LRKKVT+LMKK KL QVR IVK QD+SKPWGQ+ AKVGSR
Sbjct: 137 EMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSR 196
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIEL++ETAYIQPP Q A+GPPDIRPAF H +RTV KEQQK RRYGVI+CDPLVRQGL
Sbjct: 197 LIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGL 256
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP++WTGYDKGAHLFLPSY MRTHGARQQREA+KRAP++Q+Q V
Sbjct: 257 DRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSV 316
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+ALDTLG+TKWRVNKRVLSIVDRIWSSGG LADLVDR DV +PEKPDTEDEA++
Sbjct: 317 FEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKKWRW 376
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 377 NLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 436
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEFAEGRPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR+AFTENHL+DIFDSADRP
Sbjct: 437 LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRP 496
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWLGAEDPFQCLAVCINL EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 497 LEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDK 556
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVY+GIA RVL+IMR DA KDPATD +A RAR+LVDQVDRKLVKQ
Sbjct: 557 LGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQ 616
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKER + DDSE+F ASCYAAK TLTALGEMFQAARSIM
Sbjct: 617 TVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIM 676
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAK+IA EN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 677 NWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 736
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 737 RTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELY 796
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+TPILEN RGDFDLKDVL S YFFN
Sbjct: 797 DTPILENLLGSFEKSFPELKFPPLPERGDFDLKDVLGSPYFFN 839
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 1363 bits (3528), Expect = 0.0
Identities = 665/823 (80%), Positives = 730/823 (88%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AA EY+ELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQI TEQE DPGSRA++GP+F
Sbjct: 153 AANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATEQELVADPGSRASHGPFFS 212
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+I+RFLEKTRKK+ K
Sbjct: 213 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKKNNK 272
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ +NE+ GD A ++ LRKKVT+LMKKQKL QVR IVK QD S+PWGQ+A AKVGSR
Sbjct: 273 EMENEEEAGDTNIAIEQQRLRKKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSR 332
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LI+L + TA+IQPP Q ++G PDIRPAFRH +RT+ KEQQK RRYGVI+CDPLVRQGL
Sbjct: 333 LIDLFIGTAHIQPPASQSSDGLPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGL 392
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP+ WTGYDKGAHLFLPSY MRTHGARQQR+A+KRAP++Q+Q V
Sbjct: 393 DRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQFV 452
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+AL+TLG+TKWRVNKRVLSIVDRIWS+GG LADLVDR DVPVPEKPDTEDE +
Sbjct: 453 FEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNWKW 512
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
+NSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 513 HLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 572
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEFAEGRPLGKSGLRWLKIH+ANLYA GVDKLSYDGR+AF ENHL++IFDSADRP
Sbjct: 573 LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRP 632
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEGRRWWLGAEDPFQCLAVC+NL EALRSSSPETTISH+PVHQDGSCNGLQHYAALG+DK
Sbjct: 633 LEGRRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDK 692
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVY+GIA RV++IMR DAQKDP+ + +A RARL+VDQVDRKLVKQ
Sbjct: 693 LGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQ 752
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTY+GAREQI+RRLKERG+ +DSE+FGASCYAAK TLTALGEMFQAARSIM
Sbjct: 753 TVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIM 812
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 813 NWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 872
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHA DVD MN+ILREKFVELY
Sbjct: 873 RTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELY 932
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+TPILEN RGDFD+K+VL STYFFN
Sbjct: 933 DTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESTYFFN 975
>ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays]
gi|4559304|gb|AAD22976.1|AF127021_1 T7-like RNA
polymerase [Zea mays]
Length = 975
Score = 1357 bits (3512), Expect = 0.0
Identities = 663/823 (80%), Positives = 729/823 (88%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AA EY+ELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQI TEQE DPGSRA++GP+F
Sbjct: 153 AANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATEQELVADPGSRASHGPFFS 212
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+I+RFLEKTRKK+ K
Sbjct: 213 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKKNNK 272
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ +NE+ GD A ++ LRKKVT+LMKKQKL QVR IVK QD S+PWGQ+A AKVGSR
Sbjct: 273 EMENEEEAGDTNIAVEQQRLRKKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSR 332
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LI+L + TA+IQPP Q ++G PDIRPAFRH +RT+ KEQQK RRYGVI+CDPLVRQGL
Sbjct: 333 LIDLFIGTAHIQPPASQSSDGLPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGL 392
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP+ WTGYDKGAHLFLPSY MRTHGARQQR+A+KRAP++Q+Q V
Sbjct: 393 DRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQFV 452
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+AL+TLG+TKWRVNKRVLSIVDRIWS+GG LADLVDR DVPVPEKPDTEDE +
Sbjct: 453 FEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNWKW 512
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
+NSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 513 HLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 572
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEFAEGRPLGKSGLRWLKIH+ANLYA GVDKLSYDGR+AF ENHL++IFDSADRP
Sbjct: 573 LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRP 632
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEGRRW LGAEDPFQCLAVC+NL EALRSSSPETTISH+PVHQDGSCNGLQHYAALG+DK
Sbjct: 633 LEGRRWRLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDK 692
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVY+GIA RV++IMR DAQKDP+ + +A RARL+VDQVDRKLVKQ
Sbjct: 693 LGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQ 752
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTY+GAREQI+RRLKERG+ +DSE+FGASCYAAK TLTALGEMFQAARSIM
Sbjct: 753 TVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIM 812
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 813 NWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 872
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
+TAFPPNFVHSLDGSHMMMTA+ACK GLNFAGVHDSYWTHA DVD MN+ILREKFVELY
Sbjct: 873 KTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELY 932
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+TPILEN RGDFD+K+VL STYFFN
Sbjct: 933 DTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESTYFFN 975
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1353 bits (3502), Expect = 0.0
Identities = 660/822 (80%), Positives = 725/822 (88%), Gaps = 2/822 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELL+DMCEQKLAPNLPY+KSLFLGWFEPLRD I EQ+ C+ +RAAY PYFD
Sbjct: 158 AAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFD 217
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GS RVVQAAC IGEAIE EV+I RF+EKT+KKS
Sbjct: 218 HLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSAS 277
Query: 362 DTQNEDADGDAAAKEF--LRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRL 535
+ N D + KE LRKKV+ LMKKQKL QVR+IVK QDDSKPWGQ+A KVGSRL
Sbjct: 278 -SNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRL 336
Query: 536 IELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLD 715
IELL+ETAYIQPP DQ +GPPDIRPAF H+L+TV KE QK RRYGVIECDPLVR+GL+
Sbjct: 337 IELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLE 396
Query: 716 RTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVF 895
+TARHMVIPYMPMLVPP+NWTGYDKGA+LFLPSY MR HGARQQREA+KRAP++ L+ F
Sbjct: 397 KTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAF 456
Query: 896 QALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXX 1075
+AL+TLGNTKWR+NKRVL ++DRIW+SGG LADLVDR+DVP+PE+PDTEDEA+I
Sbjct: 457 EALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWK 516
Query: 1076 XXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDL 1255
ENSERHSQRCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDL
Sbjct: 517 VRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDL 576
Query: 1256 CRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPL 1435
CRG+LEFAEGRPLGKSGLRWLKIH+AN+YAGGVDKLSY+GR+AFTENHL+DIFDSADRPL
Sbjct: 577 CRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPL 636
Query: 1436 EGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKL 1615
EGRRWWL AEDPFQCLA CINL+EALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKL
Sbjct: 637 EGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKL 696
Query: 1616 GAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQT 1795
GA AVNLVAG+KPADVYSGIAARVLDIM++DAQKDPAT+ NALRARLL+ QVDRKLVKQT
Sbjct: 697 GAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQT 756
Query: 1796 VMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMS 1975
VMTSVYGVTY+GAR+QIKRRLKER AD+ E+F ASCYAAKTTLTALGEMF+AARSIMS
Sbjct: 757 VMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMS 816
Query: 1976 WLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQR 2155
WLGDCAKVIASENHPVRW TPLGLPVVQPYRKLGRHLIKTSLQVL+LQRETDKV+VKRQR
Sbjct: 817 WLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQR 876
Query: 2156 TAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYE 2335
TAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MNRILREKFVELY
Sbjct: 877 TAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYG 936
Query: 2336 TPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
PILEN RGDFDL++VL S YFFN
Sbjct: 937 MPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 1343 bits (3477), Expect = 0.0
Identities = 656/823 (79%), Positives = 722/823 (87%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELLADMCE KLAPNLPYVKSLFLGWFEPLRDQII EQE + G+RA++ PYF+
Sbjct: 170 AAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAPYFN 229
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEAIE EV+IH+FLEKT+KK+ K
Sbjct: 230 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKNTK 289
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ N GD A ++ LRKKVT+LMKKQK+ QVR IVK QD ++PWGQ+A AKVGSR
Sbjct: 290 EVDNVVEAGDSDIAKEQQRLRKKVTDLMKKQKIRQVRNIVKKQDSTRPWGQDAHAKVGSR 349
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIELL+ETA+IQPPV Q A+ PDIRPAF H +RTVT+EQQK RRYGVI+CDPL+RQGL
Sbjct: 350 LIELLIETAHIQPPVSQSADSTPDIRPAFTHEMRTVTREQQKSSRRYGVIKCDPLIRQGL 409
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP++WTGYDKGAHLFLPSY MRTHGARQQREA+K+APK+Q+Q +
Sbjct: 410 DRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQLI 469
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+ALDTLG+TKWR+NK+VLSIVDRIWSSGG LADLVDR DV +PEKPDTEDE ++
Sbjct: 470 FEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDETELKKWRW 529
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
ENSERHSQRCDVELKLAVARKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 530 NLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSD 589
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEF+EGRPLG SGL WLKIH+ANLYAGGVDKLSYDGR+AFTENHL+DIFDSA+RP
Sbjct: 590 LCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSANRP 649
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWLGAEDPFQCLAVC++L EALRSSSPE ISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 650 LEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMISHIPVHQDGSCNGLQHYAALGRDK 709
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLV+G+KPADVYSGIA RV++IMR+DAQKDPA D +A RARLLVDQVDRKLVKQ
Sbjct: 710 LGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDPALDPDAARARLLVDQVDRKLVKQ 769
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKERG+ DDSE+F ASCYAAK TLTALGEMF+AARSIM
Sbjct: 770 TVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAASCYAAKVTLTALGEMFEAARSIM 829
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 830 NWLGDCAKVIACENEPVRWMTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 889
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+AC + GL FAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 890 RTAFPPNFVHSLDGSHMMMTAVACNKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELY 949
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+ PILEN RGDFDL DVL S YFFN
Sbjct: 950 DAPILENLLDSFETSFPTLRFPPLPERGDFDLNDVLQSPYFFN 992
>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
Length = 1005
Score = 1338 bits (3462), Expect = 0.0
Identities = 654/823 (79%), Positives = 724/823 (87%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELLADMCE KLAPNLPYVKSLFL WFEPLRDQII EQE + G+RA++ PYF+
Sbjct: 184 AAKEYRELLADMCEHKLAPNLPYVKSLFLSWFEPLRDQIIAEQELVSERGTRASHAPYFN 243
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEA+E EV+IH+FLEKT+KK+ K
Sbjct: 244 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVEHEVRIHKFLEKTKKKNTK 303
Query: 362 DTQN--EDADGDAAAK-EFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ E D D A + E LRKKVT+LMKKQK+ QVR +VK QD ++PWGQ+A AKVGSR
Sbjct: 304 EVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSR 363
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIEL +ETA+IQPP Q + P+IRPAF H +RTV +EQ+K RRYGVI+CDPLVRQGL
Sbjct: 364 LIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQRK-SRRYGVIKCDPLVRQGL 422
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP+NWTGYDKGAHLFLPSY MRTHGARQQREA+K+APK+Q+Q +
Sbjct: 423 DRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTI 482
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+ALD LG+TKWRVNK VLSIVDRIWSSGG LADLVDR DV +PEKPDTEDEA++
Sbjct: 483 FEALDNLGSTKWRVNKEVLSIVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRW 542
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
ENSERHSQRCDVELKLAVARKMK+E GFYYPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 543 SMRSAEKENSERHSQRCDVELKLAVARKMKEEAGFYYPHNLDFRGRAYPMHPYLNHLGSD 602
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEF+EGRPLG+SGLRWLKIH+ANLY GGVDKLSYDGR+AFTENHLDDIFDSA+RP
Sbjct: 603 LCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRIAFTENHLDDIFDSANRP 662
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWL AEDPFQCLAVC++L EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 663 LEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIPVHQDGSCNGLQHYAALGRDK 722
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGA+AVNLV+G+KPADVYSGIAARV++IM++DAQKDPA DA+A RARLLVDQVDRKLVKQ
Sbjct: 723 LGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQVDRKLVKQ 782
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKERG+ ADDSE+FGASCYAAK TLTALGEMF+AARSIM
Sbjct: 783 TVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAAKVTLTALGEMFEAARSIM 842
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 843 TWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 902
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK+ GL FAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 903 RTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELY 962
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+ PILEN RG+FD+KDVL STYFFN
Sbjct: 963 DAPILENLLESFETSFPKLKFPPLPERGNFDMKDVLQSTYFFN 1005
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 1335 bits (3455), Expect = 0.0
Identities = 651/811 (80%), Positives = 714/811 (88%), Gaps = 2/811 (0%)
Frame = +2
Query: 35 MCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFDRLPADMMAVIT 214
MCEQKLAPNLPY+KSLFLGWFEPLRD I EQ+ C+ +RAAY PYFD LPADMMAVIT
Sbjct: 1 MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60
Query: 215 MHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEKDTQNEDADGDA 394
MHKLM LLMTG GS RVVQAAC IGEAIE EV+I RF+EKT+KKS + N D +
Sbjct: 61 MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSAS-SNNPDGGSNP 119
Query: 395 AAKEF--LRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRLIELLMETAYIQ 568
KE LRKKV+ LMKKQKL QVR+IVK QDDSKPWGQ+A KVGSRLIELL+ETAYIQ
Sbjct: 120 VTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQ 179
Query: 569 PPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLDRTARHMVIPYM 748
PP DQ +GPPDIRPAF H+L+TV KE QK RRYGVIECDPLVR+GL++TARHMVIPYM
Sbjct: 180 PPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYM 239
Query: 749 PMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVFQALDTLGNTKW 928
PMLVPP+NWTGYDKGA+LFLPSY MR HGARQQREA+KRAP++ L+ F+AL+TLGNTKW
Sbjct: 240 PMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKW 299
Query: 929 RVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXXXXXXXXENSER 1108
R+NKRVL ++DRIW+SGG LADLVDR+DVP+PE+PDTEDEA+I ENSER
Sbjct: 300 RINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSER 359
Query: 1109 HSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGR 1288
HSQRCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGR
Sbjct: 360 HSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 419
Query: 1289 PLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPLEGRRWWLGAED 1468
PLGKSGLRWLKIH+AN+YAGGVDKLSY+GR+AFTENHL+DIFDSADRPLEGRRWWL AED
Sbjct: 420 PLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAED 479
Query: 1469 PFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGD 1648
PFQCLA CINL+EALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGA AVNLVAG+
Sbjct: 480 PFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 539
Query: 1649 KPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQTVMTSVYGVTYV 1828
KPADVYSGIAARVLDIM++DAQKDPAT+ NALRARLL+ QVDRKLVKQTVMTSVYGVTY+
Sbjct: 540 KPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYI 599
Query: 1829 GAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMSWLGDCAKVIAS 2008
GAR+QIKRRLKER AD+ E+F ASCYAAKTTLTALGEMF+AARSIMSWLGDCAKVIAS
Sbjct: 600 GARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAS 659
Query: 2009 ENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRTAFPPNFVHSL 2188
ENHPVRW TPLGLPVVQPYRKLGRHLIKTSLQVL+LQRETDKV+VKRQRTAFPPNFVHSL
Sbjct: 660 ENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSL 719
Query: 2189 DGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYETPILENXXXXX 2368
DGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MNRILREKFVELY PILEN
Sbjct: 720 DGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGF 779
Query: 2369 XXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
RGDFDL++VL S YFFN
Sbjct: 780 QKSFPTLNFPPLPERGDFDLREVLESPYFFN 810
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 1335 bits (3455), Expect = 0.0
Identities = 647/824 (78%), Positives = 725/824 (87%), Gaps = 4/824 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEYKELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I+ EQE CR ++AAY PYFD
Sbjct: 212 AAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFD 271
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKS-- 355
+LPADMM+VITMHKL+ LLMTGGE GS RVVQAAC IG+AIEQEV+IH FLEKT++K
Sbjct: 272 QLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVG 331
Query: 356 -EKDTQNEDADGDAAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+K+ + D +E LRKKVTNLMKKQKLH R+IVKG D+SKPWG EA+AKVGSR
Sbjct: 332 KDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSR 391
Query: 533 LIELLMETAYIQPPVDQQ-AEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQG 709
LIELLM+TAYIQPPVD Q A+ PPDIRPAF H+ +TV +E +K RR+GVIECDPLV++G
Sbjct: 392 LIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKG 451
Query: 710 LDRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQK 889
L+RTARHMVIPY+PMLVPP+ WTGYDKGAHLFLPSY MRTHGARQQREA+KRAP+ QL+
Sbjct: 452 LERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEP 511
Query: 890 VFQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXX 1069
VF+AL+TLGNTKWR+NKR+ +VDRIW+ GGCLADLVDR+DVP+PEKPDTEDEAQ+
Sbjct: 512 VFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWK 571
Query: 1070 XXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 1249
NSERHSQRCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGS
Sbjct: 572 WKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGS 631
Query: 1250 DLCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADR 1429
DLCRG+LEFAEGRPLG SGL WLKIH+ANL+AGGVDKLS++GR+ FTENHLDDIFDSADR
Sbjct: 632 DLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADR 691
Query: 1430 PLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRD 1609
PLEG+RWWL AEDPFQ LA CINL+EALRSSSPETTISH+PVHQDGSCNGLQHYAALGRD
Sbjct: 692 PLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRD 751
Query: 1610 KLGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVK 1789
+LGA AVNLVAG+KPADVYSGIAARVLDIM++DA+KDPA +ALRAR+L++QVDRKLVK
Sbjct: 752 QLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVK 811
Query: 1790 QTVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSI 1969
QTVMTSVYGVTY+GAR+QIKRRLKER ADD E+FGA+CYAAK TLTALGEMFQAARSI
Sbjct: 812 QTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSI 871
Query: 1970 MSWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKR 2149
MSWLGDCAK+IASEN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRET+ ++VKR
Sbjct: 872 MSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKR 931
Query: 2150 QRTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVEL 2329
QRTAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDVD+MNR+LREKFV+L
Sbjct: 932 QRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQL 991
Query: 2330 YETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
YETPILEN RGDFDL++VL S YFFN
Sbjct: 992 YETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035
>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
Length = 862
Score = 1335 bits (3454), Expect = 0.0
Identities = 650/823 (78%), Positives = 724/823 (87%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELLADMCE KLAPNLPYVKSLFLGWFEPLRDQII EQE + G+RA++ PYF+
Sbjct: 42 AAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGTRASHAPYFN 101
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
LPADMMAVITMHKLM LLMTG GSVRV+QAACQIGEA+E EV+IH+FLEKT+KK+ K
Sbjct: 102 MLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVEHEVRIHKFLEKTKKKNTK 161
Query: 362 DTQNEDADGD---AAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ GD A ++ LRKKVT+LMKKQK+ QVR +VK QD ++PWGQ+A AKVGSR
Sbjct: 162 EVDKVVEPGDSDIAKEQQLLRKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSR 221
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIEL +ETA+IQPP Q + P+IRPAF H +RTV +EQ+ RRYGVI+CDPLVRQGL
Sbjct: 222 LIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQKS--RRYGVIKCDPLVRQGL 279
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
DRTA+HMVIPYMPML+PP+NWTGYDKGAHLFLPSY MRTHGARQQREA+K+APK+Q+Q +
Sbjct: 280 DRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQTI 339
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
F+ALD LG+TKWRVNKRVLSIVDRIWSSGG LADLVDR DV +PEKPDTEDEA++
Sbjct: 340 FEALDNLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAELKKWRW 399
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
ENSERHSQRCDVELKLAVARKMK+E GFY+PHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 400 SMRSAKKENSERHSQRCDVELKLAVARKMKEEVGFYHPHNLDFRGRAYPMHPYLNHLGSD 459
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRGVLEF+EGRPLG+SGLRWLKIH+ANLY GGVDKLSYDGR+AFTENHL+DIFDSA+RP
Sbjct: 460 LCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRP 519
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG+RWWL AEDPFQCLAVC++L EALRSSSPET ISH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 520 LEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETVISHIPVHQDGSCNGLQHYAALGRDK 579
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGA+AVNLV+G+KPADVYSGIAARV++IM++DAQKDPA DA+A RARLLVDQVDR+LVKQ
Sbjct: 580 LGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQVDRRLVKQ 639
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAREQIKRRLKERG+ ADDSE+FGASCYAAK TLTALGEMF+AARSIM
Sbjct: 640 TVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAAKVTLTALGEMFEAARSIM 699
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
+WLGDCAKVIA EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKV+VKRQ
Sbjct: 700 NWLGDCAKVIACENEPVRWKTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQ 759
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK+ GL FAGVHDSYWTHACDVD MN+ILREKFVELY
Sbjct: 760 RTAFPPNFVHSLDGSHMMMTAVACKKQGLYFAGVHDSYWTHACDVDTMNKILREKFVELY 819
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+ PILEN RG+FD+KDVL STYFFN
Sbjct: 820 DAPILENLLESFETSFPKLKFPPLPERGNFDMKDVLQSTYFFN 862
>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
gi|548846502|gb|ERN05778.1| hypothetical protein
AMTR_s00006p00254180 [Amborella trichopoda]
Length = 1006
Score = 1333 bits (3450), Expect = 0.0
Identities = 651/823 (79%), Positives = 715/823 (86%), Gaps = 3/823 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+EL+ DMCE KLAPNLPY+KSLFLGWFEPLRD I +EQ + ++ AY PYF
Sbjct: 185 AAKEYRELMMDMCEHKLAPNLPYMKSLFLGWFEPLRDIIASEQASYKAGKNKGAYAPYFM 244
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
+LPADMM+VITMHKLM LLMTG + GS R+VQAACQIGEAIEQEVKIHRF EKT+KKS+K
Sbjct: 245 QLPADMMSVITMHKLMGLLMTGTDNGSTRLVQAACQIGEAIEQEVKIHRFFEKTKKKSDK 304
Query: 362 DTQ---NEDADGDAAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSR 532
+ + E +GD KE LRK+VTNLMKKQKLHQVRKIVKGQDD+KPWG + AKVGSR
Sbjct: 305 EKKLDGEEPNEGDKE-KESLRKRVTNLMKKQKLHQVRKIVKGQDDAKPWGIDIHAKVGSR 363
Query: 533 LIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGL 712
LIELL+ETAY+QPPVDQ AEGPPDIRPAFRH L+TVTK QK RRYGVIECDPL+ +GL
Sbjct: 364 LIELLIETAYVQPPVDQSAEGPPDIRPAFRHILKTVTKNDQKIRRRYGVIECDPLICKGL 423
Query: 713 DRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKV 892
++TARHMVIPYMPMLVPPV WTGYD+G HLFLPSY MR HGARQQR A+K AP++QL KV
Sbjct: 424 EKTARHMVIPYMPMLVPPVKWTGYDRGGHLFLPSYVMRIHGARQQRYAIKHAPRKQLLKV 483
Query: 893 FQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXX 1072
++ALDTLG TKWRVNKRVL ++DRIW+ GG LADLVDR+DV +PEKPDTEDEA+I
Sbjct: 484 YEALDTLGTTKWRVNKRVLGVIDRIWADGGRLADLVDREDVAIPEKPDTEDEAKIREWKW 543
Query: 1073 XXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD 1252
+NSE HSQRCD ELKL VAR+MKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSD
Sbjct: 544 LVKGARKKNSELHSQRCDTELKLNVARRMKDEEGFHYPHNLDFRGRAYPMHPYLNHLGSD 603
Query: 1253 LCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRP 1432
LCRG+LEFAEGRPLGKSGLRWLKIH+ANLYAGGVDKLSYDGRL F ENHL+DIFDSADRP
Sbjct: 604 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLEFVENHLEDIFDSADRP 663
Query: 1433 LEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 1612
LEG RWWLGAEDPFQCLA C+NL+EALRSSSP+TTISHMPVHQDGSCNGLQHYAALGRDK
Sbjct: 664 LEGGRWWLGAEDPFQCLAACVNLSEALRSSSPDTTISHMPVHQDGSCNGLQHYAALGRDK 723
Query: 1613 LGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQ 1792
LGAIAVNLVAG+KPADVYSGIA RVLDIMR+D+QKDP +D N RA+LL++QVDRKLVKQ
Sbjct: 724 LGAIAVNLVAGEKPADVYSGIAERVLDIMRRDSQKDPTSDPNVARAKLLLNQVDRKLVKQ 783
Query: 1793 TVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIM 1972
TVMTSVYGVTYVGAR+QI RRLKERG D+ E+F ASCY AK TLTALGEMFQAARSIM
Sbjct: 784 TVMTSVYGVTYVGARDQIMRRLKERGAITDEKELFSASCYTAKVTLTALGEMFQAARSIM 843
Query: 1973 SWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQ 2152
SWLGDCAKVIASEN VRWTTPLGLPVVQPYRKLGRHLIKTSLQVL L+ ETDKV+VKRQ
Sbjct: 844 SWLGDCAKVIASENETVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLALRCETDKVMVKRQ 903
Query: 2153 RTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELY 2332
RTAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDVD+MNRILREKFVELY
Sbjct: 904 RTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELY 963
Query: 2333 ETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
TPILEN RGDFDLK+VL+S YFFN
Sbjct: 964 STPILENLLRNFQELFPKLSFPPLPARGDFDLKEVLDSPYFFN 1006
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1326 bits (3432), Expect = 0.0
Identities = 645/839 (76%), Positives = 723/839 (86%), Gaps = 19/839 (2%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELLADMCEQKLAPNLPY+KSLFLGWFEPLRD I +Q+ C+ P SR ++ PYFD
Sbjct: 170 AAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFD 229
Query: 182 RLPADMMAVITMHKLMSLLMTGGEG-GSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSE 358
LPAD MAVITMHKLM LLMT G GSVRVVQAAC IGEAIE EV+IHRFLEKT+KK
Sbjct: 230 HLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKK-- 287
Query: 359 KDTQNEDADGDAAA------------------KEFLRKKVTNLMKKQKLHQVRKIVKGQD 484
K+T ++ A+ D+ +E LRKKV L+K+QK+ QVR IVK Q+
Sbjct: 288 KNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQE 347
Query: 485 DSKPWGQEAQAKVGSRLIELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFC 664
D KPWGQEA KVG RLI+LLM+TAYIQPPVDQ +GPPDIRPAF H+L+T+T++ QK
Sbjct: 348 DLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTS 407
Query: 665 RRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQ 844
RRYGVIECDP+VR+G+++TARHMV+PYMPMLVPP+NWTGYD+GA+LFLPSY MRTHGA+Q
Sbjct: 408 RRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQ 467
Query: 845 QREALKRAPKQQLQKVFQALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVP 1024
QRE +KR P++QL+ VF+ALDTLG+TKWRVNKRVL ++DRIW+SGG LADLVDR+DVP+P
Sbjct: 468 QREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLP 527
Query: 1025 EKPDTEDEAQIXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFR 1204
E+PDTEDEA+I ENSERHSQRCD+ELKLA +RKMKDEEGFYYPHNLDFR
Sbjct: 528 EEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFR 587
Query: 1205 GRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLA 1384
GRAYPMHPYLNHLGSD+CRG+LEF+EGR LGKSGLRWLKIH+ANLYAGGVDKLS+D R A
Sbjct: 588 GRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAA 647
Query: 1385 FTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQD 1564
FTENH+D+IFDSADRPLEGRRWWLGAEDPFQCLA CINL EALRS SPETTIS+MPVHQD
Sbjct: 648 FTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQD 707
Query: 1565 GSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANAL 1744
GSCNGLQHYAALGRDKLGA AVNLV GDKPADVYSGIAARVLDIMR DA+KDPAT+ NAL
Sbjct: 708 GSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNAL 767
Query: 1745 RARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKT 1924
ARLL++QVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLKERG ADD+ +F A+CYAA+T
Sbjct: 768 HARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAART 827
Query: 1925 TLTALGEMFQAARSIMSWLGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ 2104
TLTALGEMF+AARSIMSWLG+CAKVIASEN PVRW TPLGLPVVQPYR+LGRHLIKTSLQ
Sbjct: 828 TLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQ 887
Query: 2105 VLTLQRETDKVLVKRQRTAFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACD 2284
VLTLQRETDKV+VKRQRTAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACD
Sbjct: 888 VLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACD 947
Query: 2285 VDQMNRILREKFVELYETPILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
+D+MNRILREKFVELYE PILEN RGDFDL+DVL S YFFN
Sbjct: 948 IDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1317 bits (3409), Expect = 0.0
Identities = 641/821 (78%), Positives = 712/821 (86%), Gaps = 1/821 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I EQ+ C + +R AY P+FD
Sbjct: 184 AAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 243
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
+LPA+MMAVITMHKLM LLMTGG GS RVVQAA IGEAIE E +IHRFLEKT+K +
Sbjct: 244 QLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNAL 303
Query: 362 DTQNEDADGDAAA-KEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRLI 538
E+ GD +E LRKKV LMKKQKL QVRKIVK QDD KPWGQ+ KVG RLI
Sbjct: 304 SGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLI 363
Query: 539 ELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLDR 718
++LMETAYIQPP DQ +GPPDIRPAF H+L+TV E K RRYGVI+CDPLVR+GLD+
Sbjct: 364 QILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLDK 421
Query: 719 TARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVFQ 898
TARHMVIPYMPMLVPP +W GYDKG +LFLPSY MRTHGA+QQREA+KR PK+QL+ VFQ
Sbjct: 422 TARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQ 481
Query: 899 ALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXXX 1078
ALDTLGNTKWRVN++VL IVDRIW+SGG LADLVDR+DVP+PE PDTEDEA+I
Sbjct: 482 ALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKV 541
Query: 1079 XXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 1258
EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLC
Sbjct: 542 KGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 601
Query: 1259 RGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPLE 1438
RG+LEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GR+AF+ENHL+DIFDSA+RPLE
Sbjct: 602 RGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLE 661
Query: 1439 GRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 1618
G+RWWLGAEDPFQCLA CIN+AEALRS SPET IS+MP+HQDGSCNGLQHYAALGRDKLG
Sbjct: 662 GKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLG 721
Query: 1619 AIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQTV 1798
A AVNLVAGDKPADVYSGIAARVLDIM++DA KDPA D N +RARLL++QVDRKLVKQTV
Sbjct: 722 AAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTV 781
Query: 1799 MTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMSW 1978
MTSVYGVTY+GAR+QIK+RLKERG+ DD+E+F A+CYAAKTTLTALGEMF+AARSIMSW
Sbjct: 782 MTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSW 841
Query: 1979 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRT 2158
LGDCAK+IA ENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+VKRQRT
Sbjct: 842 LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901
Query: 2159 AFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYET 2338
AFPPNFVHSLDGSHMMMTA+ACKE+GL+FAGVHDSYWTHACDVDQMN+ILREKFVELY+
Sbjct: 902 AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 961
Query: 2339 PILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
PILEN RGDFDL++VL S YFFN
Sbjct: 962 PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1316 bits (3405), Expect = 0.0
Identities = 640/820 (78%), Positives = 710/820 (86%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I EQ+ C + +R AY P+FD
Sbjct: 176 AAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 235
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
+LPA+MMAVITMHKLM LLMTGG GS RVVQAA IGEAIE E +IHRFLEKT+K +
Sbjct: 236 QLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNALD 295
Query: 362 DTQNEDADGDAAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRLIE 541
+ E A +E LRKKV LMKKQKL QVRKIVK QDD KPWGQ+ KVG +LI+
Sbjct: 296 GSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCKLIQ 355
Query: 542 LLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLDRT 721
+L+ETAYIQPP DQ + PPDIRPAF H+L+TV E K RRYGVI+CDPLVR+GLD+T
Sbjct: 356 ILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTV--ETVKGSRRYGVIQCDPLVRKGLDKT 413
Query: 722 ARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVFQA 901
ARHMVIPYMPMLVPP NW+GYD+GA+LFLPSY MRTHGA+QQREA+KR PK+QL+ VFQA
Sbjct: 414 ARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQA 473
Query: 902 LDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXXXX 1081
LDTLGNTKWRVNKRVL I+DRIW+SGG LADLVDR+DVP+PE+PDTEDE +I
Sbjct: 474 LDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEIKKWKWKVK 533
Query: 1082 XXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 1261
EN ERHSQRCD+ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR
Sbjct: 534 AAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 593
Query: 1262 GVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPLEG 1441
G+LEF+EGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GR AF+ENH++DIFDSADRPLEG
Sbjct: 594 GILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSADRPLEG 653
Query: 1442 RRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGA 1621
RRWWLGAEDPFQCLA CIN++EALRS SPET+ISHMP+HQDGSCNGLQHYAALGRDKLGA
Sbjct: 654 RRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGA 713
Query: 1622 IAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQTVM 1801
AVNLVAGDKPADVYSGIAARVLDIM++DA KDPATD N +RARLL++QVDRKLVKQTVM
Sbjct: 714 AAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVM 773
Query: 1802 TSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMSWL 1981
TSVYGVTY+GAR+QIKRRLKERG DD+E+F A+CYAAKTTLTALGEMF+AARSIMSWL
Sbjct: 774 TSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMSWL 833
Query: 1982 GDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRTA 2161
GDCAK+IA EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+VKRQRTA
Sbjct: 834 GDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTA 893
Query: 2162 FPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYETP 2341
FPPNFVHSLDGSHMMMTA+ CKEAGL+FAGVHDSYWTHA DVDQMN+ILREKFVELY+ P
Sbjct: 894 FPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAP 953
Query: 2342 ILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
ILEN RGDFDL++VL S YFFN
Sbjct: 954 ILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1315 bits (3404), Expect = 0.0
Identities = 638/821 (77%), Positives = 718/821 (87%), Gaps = 1/821 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEYKELL DMCEQKLAPNLPYVKSLFLGWFEPLRD+I EQE C S+AAY YF
Sbjct: 200 AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFY 259
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRK-KSE 358
+LPADMMAVITMHKLM LLMTGG+ G+ RVVQAA IG+AIEQEV+IH FLEKT+K K+E
Sbjct: 260 QLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAE 319
Query: 359 KDTQNEDADGDAAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRLI 538
KD Q ED + +E LRKKVTNLMKKQKL V +IV+ QDDSKPWGQ+A+AKVGSRLI
Sbjct: 320 KDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLI 379
Query: 539 ELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLDR 718
+LL++TAYIQPP +Q A PPDIRPAF HS+RTV KE + RRYG+I+CD LV +GL+R
Sbjct: 380 DLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLER 439
Query: 719 TARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVFQ 898
TARHMVIPYMPMLVPPV WTGYDKG HL+LPSY MRTHGARQQREA+KRA + QLQ VF+
Sbjct: 440 TARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFE 499
Query: 899 ALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXXX 1078
ALDTLGNTKWR+NKRVLS+VDRIW+ GG LADLVDRDD P+PE+PDTEDEA
Sbjct: 500 ALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKV 559
Query: 1079 XXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 1258
EN ERHSQRCD+ELKLAVARKMKDEE F+YPHN+DFRGRAYPMHP+LNHLGSD+C
Sbjct: 560 KSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDIC 619
Query: 1259 RGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPLE 1438
RGVLEFAEGRPLG+SGLRWLKIH+ANL+AGGV+KLS +GR+ FTENH+DDIFDS+D+PLE
Sbjct: 620 RGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLE 679
Query: 1439 GRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 1618
GRRWWL AEDPFQCLAVCINL+EA+RSSSPET++SH+PVHQDGSCNGLQHYAALGRDKLG
Sbjct: 680 GRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLG 739
Query: 1619 AIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQTV 1798
A AVNLVAG+KPADVYSGIAARVLDIM++DAQ+DPA +A+RAR+LV+QVDRKLVKQTV
Sbjct: 740 AAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTV 799
Query: 1799 MTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMSW 1978
MTSVYGVTY+GAR+QIKRRLKERG ADDSE+FGA+CYAAK TLTALGEMF+AARSIM+W
Sbjct: 800 MTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTW 859
Query: 1979 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRT 2158
LG+CAK+IASEN PVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQRET+KV+VKRQRT
Sbjct: 860 LGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRT 919
Query: 2159 AFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYET 2338
AFPPNF+HSLDGSHMMMTA+AC+ AGLNFAGVHDSYWTHACDVD++NRILREKFVELYE
Sbjct: 920 AFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEA 979
Query: 2339 PILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
PILE RGDFD++DVL S YFFN
Sbjct: 980 PILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1315 bits (3404), Expect = 0.0
Identities = 640/821 (77%), Positives = 712/821 (86%), Gaps = 1/821 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I EQ+ C + +R AY P+FD
Sbjct: 184 AAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 243
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRKKSEK 361
+LPA+MMAVITMHKLM LLMTGG GS RVVQAA IGEAIE E +IHRFLEKT+K +
Sbjct: 244 QLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNAL 303
Query: 362 DTQNEDADGDAAA-KEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRLI 538
E+ GD +E LRKKV LMKKQKL QVRKIVK QDD KPWGQ+ KVG RLI
Sbjct: 304 SGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLI 363
Query: 539 ELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLDR 718
++LMETAYIQPP DQ +GPPDIRPAF H+L+TV E K RRYGVI+CDPLVR+GLD+
Sbjct: 364 QILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLDK 421
Query: 719 TARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVFQ 898
TARHMVIPYMPMLVPP +W GYDKG +LFLPSY MRTHGA+QQREA+KR PK+QL+ VFQ
Sbjct: 422 TARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQ 481
Query: 899 ALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXXX 1078
ALDTLGNTKWRVN++VL IV+RIW+SGG LADLVDR+DVP+PE PDTEDEA+I
Sbjct: 482 ALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKV 541
Query: 1079 XXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 1258
EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLC
Sbjct: 542 KGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 601
Query: 1259 RGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPLE 1438
RG+LEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GR+AF+ENHL+DIFDSA+RPLE
Sbjct: 602 RGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLE 661
Query: 1439 GRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 1618
G+RWWLGAEDPFQCLA CIN+AEALRS SPET IS+MP+HQDGSCNGLQHYAALGRDKLG
Sbjct: 662 GKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLG 721
Query: 1619 AIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQTV 1798
A AVNLVAGDKPADVYSGIAARVLDIM++DA KDPA D N +RARLL++QVDRKLVKQTV
Sbjct: 722 AAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTV 781
Query: 1799 MTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMSW 1978
MTSVYGVTY+GAR+QIK+RLKERG+ DD+E+F A+CYAAKTTLTALGEMF+AARSIMSW
Sbjct: 782 MTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSW 841
Query: 1979 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRT 2158
LGDCAK+IA ENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+VKRQRT
Sbjct: 842 LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901
Query: 2159 AFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYET 2338
AFPPNFVHSLDGSHMMMTA+ACKE+GL+FAGVHDSYWTHACDVDQMN+ILREKFVELY+
Sbjct: 902 AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 961
Query: 2339 PILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
PILEN RGDFDL++VL S YFFN
Sbjct: 962 PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 1314 bits (3400), Expect = 0.0
Identities = 639/821 (77%), Positives = 718/821 (87%), Gaps = 1/821 (0%)
Frame = +2
Query: 2 AAKEYKELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIITEQEQCRDPGSRAAYGPYFD 181
AAKEYKELL DMCEQKLAPNLPYVKSLFLGWFEPLRD+I EQE C S+AAY Y
Sbjct: 201 AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLY 260
Query: 182 RLPADMMAVITMHKLMSLLMTGGEGGSVRVVQAACQIGEAIEQEVKIHRFLEKTRK-KSE 358
+LPADMMAVITMHKLM LLMTGG+ G+ RVVQAA IG+AIEQEV+IH FLEKT+K K+E
Sbjct: 261 QLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAE 320
Query: 359 KDTQNEDADGDAAAKEFLRKKVTNLMKKQKLHQVRKIVKGQDDSKPWGQEAQAKVGSRLI 538
KD Q ED + +E LRKKVTNLMKKQKL V +IV+ QDDSKPWGQ+A+AKVGSRLI
Sbjct: 321 KDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLI 380
Query: 539 ELLMETAYIQPPVDQQAEGPPDIRPAFRHSLRTVTKEQQKFCRRYGVIECDPLVRQGLDR 718
ELL++TAYIQPP +Q A PPDIRPAF HS+RTV KE + RRYG+I+CD LV +GL+R
Sbjct: 381 ELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLER 440
Query: 719 TARHMVIPYMPMLVPPVNWTGYDKGAHLFLPSYAMRTHGARQQREALKRAPKQQLQKVFQ 898
TARHMVIPYMPMLVPPV WTGYDKG HL+LPSY MRTHGARQQREA+KRA + QLQ VF+
Sbjct: 441 TARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFE 500
Query: 899 ALDTLGNTKWRVNKRVLSIVDRIWSSGGCLADLVDRDDVPVPEKPDTEDEAQIXXXXXXX 1078
ALDTLG+TKWR+NKRVLS++DRIW+ GG LADLVDRDD P+PE+PDTEDEA
Sbjct: 501 ALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKV 560
Query: 1079 XXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 1258
EN ERHSQRCD+ELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHP+LNHLGSD+C
Sbjct: 561 KSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDIC 620
Query: 1259 RGVLEFAEGRPLGKSGLRWLKIHVANLYAGGVDKLSYDGRLAFTENHLDDIFDSADRPLE 1438
RGVL FAEGRPLG+SGLRWLKIH+ANL+AGGV+KLS +GR+AFTENH+DDIFDSAD+PLE
Sbjct: 621 RGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLE 680
Query: 1439 GRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 1618
GRRWWL AEDPFQCLAVCINL+EA+RSSSPET+ISH+PVHQDGSCNGLQHYAALGRD+LG
Sbjct: 681 GRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELG 740
Query: 1619 AIAVNLVAGDKPADVYSGIAARVLDIMRQDAQKDPATDANALRARLLVDQVDRKLVKQTV 1798
A AVNLVAG+KPADVYSGIAARVLDIM++DAQ+DPA +A+RAR LV+QVDRKLVKQTV
Sbjct: 741 AAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTV 800
Query: 1799 MTSVYGVTYVGAREQIKRRLKERGLSADDSEIFGASCYAAKTTLTALGEMFQAARSIMSW 1978
MTSVYGVTY+GAR+QIKRRLKERG ADDSE+FGA+CYAAK TLTALGEMF+AARSIM+W
Sbjct: 801 MTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTW 860
Query: 1979 LGDCAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLVKRQRT 2158
LG+CAK+IASEN PVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQ+ET+KV+VKRQRT
Sbjct: 861 LGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRT 920
Query: 2159 AFPPNFVHSLDGSHMMMTALACKEAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYET 2338
AFPPNF+HSLDGSHMMMTA+AC+ AGLNFAGVHDSYWTHACDVD++NRILREKFVELYET
Sbjct: 921 AFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYET 980
Query: 2339 PILENXXXXXXXXXXXXXXXXXXXRGDFDLKDVLNSTYFFN 2461
PILE RGDFDL+DVL S YFFN
Sbjct: 981 PILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021