BLASTX nr result
ID: Stemona21_contig00011742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00011742
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK06291.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 1e-08
ref|XP_003557416.1| PREDICTED: DNA-directed RNA polymerase II su... 63 4e-08
ref|XP_002461285.1| hypothetical protein SORBIDRAFT_02g000210 [S... 63 4e-08
ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea ma... 63 4e-08
ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II su... 63 5e-08
ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [S... 63 5e-08
ref|XP_006650782.1| PREDICTED: DNA-directed RNA polymerases II, ... 62 6e-08
gb|AFW72351.1| hypothetical protein ZEAMMB73_926131 [Zea mays] 62 1e-07
dbj|BAJ85721.1| predicted protein [Hordeum vulgare subsp. vulgar... 62 1e-07
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin... 61 2e-07
ref|NP_001058998.1| Os07g0172500 [Oryza sativa Japonica Group] g... 60 2e-07
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ... 60 2e-07
gb|EAZ02926.1| hypothetical protein OsI_25066 [Oryza sativa Indi... 60 2e-07
gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK236... 60 3e-07
ref|XP_004955770.1| PREDICTED: DNA-directed RNA polymerase II su... 59 5e-07
gb|AFK46555.1| unknown [Lotus japonicus] 59 5e-07
gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus... 59 7e-07
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su... 58 2e-06
gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus pe... 57 3e-06
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su... 56 4e-06
>dbj|BAK06291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 120
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVRI + DLD ELE+LK FEDE RFE +++
Sbjct: 60 GYKLPHPLQYKIIVRIHTASQSSPTQAYTQAINDLDKELENLKQAFEDEKTRFEERMKQG 119
Query: 223 Y 225
Y
Sbjct: 120 Y 120
>ref|XP_003557416.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Brachypodium distachyon]
Length = 120
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/61 (52%), Positives = 36/61 (59%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVRI + DLD ELE LK FEDE RFE +++
Sbjct: 60 GYKLPHPLQYKIIVRIHTASQSSPTQAYTQGIDDLDKELEILKQAFEDEKNRFEERMKQG 119
Query: 223 Y 225
Y
Sbjct: 120 Y 120
>ref|XP_002461285.1| hypothetical protein SORBIDRAFT_02g000210 [Sorghum bicolor]
gi|241924662|gb|EER97806.1| hypothetical protein
SORBIDRAFT_02g000210 [Sorghum bicolor]
Length = 120
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVRI V DLD ELE+LK FEDE R+E +++
Sbjct: 60 GYKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRYEERMKQG 119
Query: 223 Y 225
+
Sbjct: 120 F 120
>ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea mays]
gi|194696560|gb|ACF82364.1| unknown [Zea mays]
gi|194699868|gb|ACF84018.1| unknown [Zea mays]
gi|194706942|gb|ACF87555.1| unknown [Zea mays]
gi|195615212|gb|ACG29436.1| DNA-directed RNA polymerase
II subunit J [Zea mays] gi|195628620|gb|ACG36140.1|
DNA-directed RNA polymerase II subunit J [Zea mays]
gi|195656859|gb|ACG47897.1| DNA-directed RNA polymerase
II subunit J [Zea mays] gi|413937791|gb|AFW72342.1|
DNA-directed RNA polymerase II subunit J isoform 1 [Zea
mays] gi|413937792|gb|AFW72343.1| DNA-directed RNA
polymerase II subunit J isoform 2 [Zea mays]
gi|413937793|gb|AFW72344.1| DNA-directed RNA polymerase
II subunit J isoform 3 [Zea mays]
gi|413937794|gb|AFW72345.1| DNA-directed RNA polymerase
II subunit J isoform 4 [Zea mays]
gi|413937795|gb|AFW72346.1| DNA-directed RNA polymerase
II subunit J isoform 5 [Zea mays]
Length = 120
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVRI + DLD ELE+LK FEDE R+E +++
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFEDEKNRYEDRMKQG 119
Query: 223 Y 225
+
Sbjct: 120 F 120
>ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 1 [Brachypodium distachyon]
gi|357159117|ref|XP_003578344.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB11-like isoform 2
[Brachypodium distachyon]
Length = 119
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFE 204
GYKLPHPLQYKIIVRI + DLD ELE+LK FEDE RFE
Sbjct: 60 GYKLPHPLQYKIIVRIHTASQSSPTQAYNQAINDLDSELENLKQAFEDEKNRFE 113
>ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [Sorghum bicolor]
gi|241938640|gb|EES11785.1| hypothetical protein
SORBIDRAFT_06g001360 [Sorghum bicolor]
Length = 117
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/54 (59%), Positives = 33/54 (61%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFE 204
GYKLPHPLQYKIIVRI V DLD ELE+LK FEDE RFE
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRFE 113
>ref|XP_006650782.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
11-like [Oryza brachyantha]
gi|573950396|ref|XP_006657491.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 11-like [Oryza
brachyantha]
Length = 120
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVR+ + DLD ELE+LK FEDE R+E + +
Sbjct: 60 GYKLPHPLQYKIIVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKNRYEERPKQG 119
Query: 223 Y 225
Y
Sbjct: 120 Y 120
>gb|AFW72351.1| hypothetical protein ZEAMMB73_926131 [Zea mays]
Length = 120
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVRI + DLD ELE+LK FEDE R++ +++
Sbjct: 60 GYKLPHPLQYKIIVRIHTMSQSSLTQAYTQAINDLDKELEYLKQAFEDEKNRYKDRMKQG 119
Query: 223 Y 225
+
Sbjct: 120 F 120
>dbj|BAJ85721.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518464|dbj|BAJ88261.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326525789|dbj|BAJ88941.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 119
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/54 (57%), Positives = 33/54 (61%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFE 204
GYKLPHPLQYKIIVRI + DLD ELE+LK FEDE RFE
Sbjct: 60 GYKLPHPLQYKIIVRIHTASQSSPTQAYTQAINDLDKELENLKQAFEDEKTRFE 113
>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
gi|255626235|gb|ACU13462.1| unknown [Glycine max]
Length = 116
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/53 (58%), Positives = 33/53 (62%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRF 201
GYKLPHPLQYKIIVRI V DLD EL+HLKS FE EM +F
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKF 112
>ref|NP_001058998.1| Os07g0172500 [Oryza sativa Japonica Group]
gi|34394446|dbj|BAC83620.1| putative DNA-directed RNA
polymerase II 13.6K chain [Oryza sativa Japonica Group]
gi|113610534|dbj|BAF20912.1| Os07g0172500 [Oryza sativa
Japonica Group] gi|215704597|dbj|BAG94225.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 120
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKI+VR+ + DLD ELE+LK FEDE R+E + +
Sbjct: 60 GYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKIRYEERPKQG 119
Query: 223 Y 225
Y
Sbjct: 120 Y 120
>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
[Glycine max]
Length = 116
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRF 201
GYKLPHPLQYKIIVRI + DLD EL+HLKS FE EM +F
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKF 112
>gb|EAZ02926.1| hypothetical protein OsI_25066 [Oryza sativa Indica Group]
gi|125599273|gb|EAZ38849.1| hypothetical protein
OsJ_23266 [Oryza sativa Japonica Group]
Length = 135
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKI+VR+ + DLD ELE+LK FEDE R+E + +
Sbjct: 75 GYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKIRYEERPKQG 134
Query: 223 Y 225
Y
Sbjct: 135 Y 135
>gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK23600.1| unknown
[Picea sitchensis] gi|116790373|gb|ABK25590.1| unknown
[Picea sitchensis] gi|224284720|gb|ACN40091.1| unknown
[Picea sitchensis]
Length = 120
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRD 219
GYKLPHPLQYKI++RI + DLD EL+HLK FEDEM R + + R+
Sbjct: 60 GYKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSFEDEMVRLQSENRE 118
>ref|XP_004955770.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Setaria italica] gi|514825448|ref|XP_004987377.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Setaria italica]
Length = 120
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/61 (49%), Positives = 35/61 (57%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKVRDE 222
GYKLPHPLQYKIIVRI V DLD ELE+LK FE E R+E + +
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPTQAYTQAVNDLDKELEYLKQAFEVEKNRYEERAKQG 119
Query: 223 Y 225
+
Sbjct: 120 F 120
>gb|AFK46555.1| unknown [Lotus japonicus]
Length = 116
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRF 201
GYKLPHPLQYKIIVRI + DLD EL+HLK+ FE +M RF
Sbjct: 60 GYKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFEADMLRF 112
>gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
Length = 116
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRF 201
GYKLPHPLQYKII+RI + DLD EL+HLK+ FE EM +F
Sbjct: 60 GYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAEMLKF 112
>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Cucumis sativus] gi|449516703|ref|XP_004165386.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Cucumis sativus]
Length = 116
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRF 201
GYKLPHPLQYKIIVRI + DLD EL+HLK+ FE E +F
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKF 112
>gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
Length = 116
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKR 198
GYKLPHPLQYKIIVRI + DLD EL+HLKS FE E+ +
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAK 111
>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 118
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/57 (50%), Positives = 34/57 (59%)
Frame = +1
Query: 43 GYKLPHPLQYKIIVRIXXXXXXXXXXXXXXXVGDLDGELEHLKSVFEDEMKRFEGKV 213
GYKLPHPLQYKIIVRI + DLD EL+HLKS FE E+ + +V
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKHSMQV 116