BLASTX nr result
ID: Stemona21_contig00011697
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00011697
(794 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006654073.1| PREDICTED: DNA-directed RNA polymerase V sub... 114 1e-41
ref|XP_003568817.1| PREDICTED: DNA-directed RNA polymerase II su... 110 1e-41
gb|EEC78737.1| hypothetical protein OsI_18944 [Oryza sativa Indi... 115 2e-41
ref|XP_004958533.1| PREDICTED: DNA-directed RNA polymerase II su... 109 3e-41
ref|XP_003568883.1| PREDICTED: DNA-directed RNA polymerase II su... 109 4e-41
gb|EMS58496.1| DNA-directed RNA polymerase II subunit RPB7 [Trit... 109 7e-41
gb|EMT05702.1| DNA-directed RNA polymerase II subunit RPB7 [Aegi... 108 9e-41
ref|XP_002439325.1| hypothetical protein SORBIDRAFT_09g004460 [S... 107 1e-40
ref|NP_001054703.1| Os05g0157100 [Oryza sativa Japonica Group] g... 111 4e-40
ref|NP_001150375.1| LOC100284005 [Zea mays] gi|194705372|gb|ACF8... 105 7e-40
dbj|BAK04600.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 4e-39
gb|EEE62799.1| hypothetical protein OsJ_17602 [Oryza sativa Japo... 100 7e-37
gb|AAS98454.2| putative receptor kinase [Oryza sativa Japonica G... 100 7e-37
gb|EMS61603.1| DNA-directed RNA polymerase II subunit RPB7 [Trit... 95 1e-31
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep... 89 1e-31
gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isofo... 91 1e-30
gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theo... 91 2e-30
ref|XP_002314654.1| predicted protein [Populus trichocarpa] 90 3e-30
ref|XP_006414666.1| hypothetical protein EUTSA_v10026369mg [Eutr... 91 4e-30
ref|NP_193202.2| DNA-directed RNA polymerase V subunit NRPE7 [Ar... 89 4e-30
>ref|XP_006654073.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Oryza
brachyantha]
Length = 175
Score = 114 bits (284), Expect(2) = 1e-41
Identities = 52/74 (70%), Positives = 63/74 (85%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEKTM DY ++ GENP+F N+ H KLEK++ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPIESIFLSEKTMSDYKYIGGENPMFMND-HSKLEKETVVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LATLAGDYLGPL
Sbjct: 162 QLLATLAGDYLGPL 175
Score = 83.6 bits (205), Expect(2) = 1e-41
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+VE+ W+VLISP L LEDIA RKASK+HG Y+AV+ L ++
Sbjct: 1 MVFLKVEMSWNVLISPSDLSPQGLLLRKAVIVRLLEDIANRKASKDHGYYIAVSELKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>ref|XP_003568817.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
1 [Brachypodium distachyon]
gi|357134426|ref|XP_003568818.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform 2
[Brachypodium distachyon]
Length = 175
Score = 110 bits (276), Expect(2) = 1e-41
Identities = 50/74 (67%), Positives = 62/74 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEKTM DY ++ GENP+F + H KLEKD+ VRF+V+GF+WME DR F
Sbjct: 103 FLKSGPIENIFLSEKTMNDYKYIGGENPMFMKD-HSKLEKDTIVRFRVMGFRWMEGDRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LATLAGD+LGPL
Sbjct: 162 QLLATLAGDFLGPL 175
Score = 86.3 bits (212), Expect(2) = 1e-41
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL E+ W+VLISPDQL A LED+ RKASKEHG Y+AV L ++
Sbjct: 1 MVFLLTEMSWNVLISPDQLSAKGLLLRKFIIVRLLEDVTNRKASKEHGYYIAVNELKEIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>gb|EEC78737.1| hypothetical protein OsI_18944 [Oryza sativa Indica Group]
Length = 175
Score = 115 bits (287), Expect(2) = 2e-41
Identities = 52/74 (70%), Positives = 63/74 (85%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEKT+ DY ++ GENP+F N+ H KLEKD+ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPIESIFLSEKTLSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LATLAGDYLGPL
Sbjct: 162 QILATLAGDYLGPL 175
Score = 81.6 bits (200), Expect(2) = 2e-41
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+V++ W+VLISP +L LE+IA RKASK+HG Y+AV+ L ++
Sbjct: 1 MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>ref|XP_004958533.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Setaria italica]
Length = 175
Score = 109 bits (273), Expect(2) = 3e-41
Identities = 48/74 (64%), Positives = 63/74 (85%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGP+E +F++EK+M DY ++ GENP+F N+ H KLEKD+ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPVESIFMAEKSMSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LAT+AGD+LGPL
Sbjct: 162 QLLATIAGDFLGPL 175
Score = 86.3 bits (212), Expect(2) = 3e-41
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFLEVE+ W+VLISP QLD LED+ ++ASKEHG YVAV L ++
Sbjct: 1 MVFLEVEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNKRASKEHGYYVAVNQLKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>ref|XP_003568883.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 175
Score = 109 bits (273), Expect(2) = 4e-41
Identities = 50/74 (67%), Positives = 61/74 (82%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE VF+SEKTM DY ++ GENP+F + H KLEKD+ +RFK +GF+WME DR F
Sbjct: 103 FLKSGPIENVFLSEKTMNDYKYIGGENPMFMKD-HSKLEKDTVLRFKAMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LATLAGD+LGPL
Sbjct: 162 QLLATLAGDFLGPL 175
Score = 85.9 bits (211), Expect(2) = 4e-41
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL ++ W+VLISPDQL + LEDIA RKASKEHG Y+AV L ++
Sbjct: 1 MVFLLADMSWNVLISPDQLSSKGLLLRKSILVRLLEDIANRKASKEHGYYIAVNELKEIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>gb|EMS58496.1| DNA-directed RNA polymerase II subunit RPB7 [Triticum urartu]
Length = 175
Score = 109 bits (272), Expect(2) = 7e-41
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEK+M DY ++ GENP+F N+ H KLE+D+ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPIESIFLSEKSMSDYKYMGGENPLFMND-HSKLERDTAVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LA+LAGD+LGPL
Sbjct: 162 QLLASLAGDFLGPL 175
Score = 85.5 bits (210), Expect(2) = 7e-41
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+ E+ W+VLISPDQL LED+ RKASKEHG Y+AV L ++
Sbjct: 1 MVFLQEEMSWNVLISPDQLSPKGLLLRKSIIVRLLEDVTNRKASKEHGYYIAVNELKTIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>gb|EMT05702.1| DNA-directed RNA polymerase II subunit RPB7 [Aegilops tauschii]
Length = 175
Score = 108 bits (271), Expect(2) = 9e-41
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEK+M DY ++ GENP+F N+ H KLE+D+ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPIESIFLSEKSMSDYKYMGGENPMFMND-HSKLERDTAVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LA+LAGD+LGPL
Sbjct: 162 QLLASLAGDFLGPL 175
Score = 85.5 bits (210), Expect(2) = 9e-41
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+ E+ W+VLISPDQL LED+ RKASKEHG Y+AV L ++
Sbjct: 1 MVFLQEEMSWNVLISPDQLSPKGLLLRKSIIVRLLEDVTNRKASKEHGYYIAVNELKTIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>ref|XP_002439325.1| hypothetical protein SORBIDRAFT_09g004460 [Sorghum bicolor]
gi|241944610|gb|EES17755.1| hypothetical protein
SORBIDRAFT_09g004460 [Sorghum bicolor]
Length = 175
Score = 107 bits (268), Expect(2) = 1e-40
Identities = 48/74 (64%), Positives = 62/74 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGP+E +F++EK+M DY ++ GEN +F N+ H KLEKD+ VRFKVLGF+WME DR F
Sbjct: 103 FLKSGPVESIFLAEKSMSDYKYIGGENAMFMND-HSKLEKDTAVRFKVLGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LAT+AGD+LGPL
Sbjct: 162 QLLATIAGDFLGPL 175
Score = 86.3 bits (212), Expect(2) = 1e-40
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFLE E+ W+VLISP QLD LED+ R+ASKEHG YVAV+ L ++
Sbjct: 1 MVFLEAEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNRRASKEHGYYVAVSQLKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>ref|NP_001054703.1| Os05g0157100 [Oryza sativa Japonica Group]
gi|45267865|gb|AAS55764.1| putative RNA polymerase II
[Oryza sativa Japonica Group]
gi|113578254|dbj|BAF16617.1| Os05g0157100 [Oryza sativa
Japonica Group] gi|125550915|gb|EAY96624.1| hypothetical
protein OsI_18537 [Oryza sativa Indica Group]
gi|215692867|dbj|BAG88287.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222630264|gb|EEE62396.1| hypothetical protein
OsJ_17187 [Oryza sativa Japonica Group]
Length = 175
Score = 111 bits (278), Expect(2) = 4e-40
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEKTM D+ ++ GEN +F N +H KLEKD+ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPIESIFLSEKTMSDFKYIGGENAVFMN-EHSKLEKDTVVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LATLAGDYLGPL
Sbjct: 162 QLLATLAGDYLGPL 175
Score = 80.5 bits (197), Expect(2) = 4e-40
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+VE+ +VLISP QL LEDIA RKASK+HG Y+AV+ L ++
Sbjct: 1 MVFLKVEMSLNVLISPSQLSPQGLLLRKAVIVRLLEDIANRKASKDHGYYIAVSELKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>ref|NP_001150375.1| LOC100284005 [Zea mays] gi|194705372|gb|ACF86770.1| unknown [Zea
mays] gi|195638760|gb|ACG38848.1| DNA-directed RNA
polymerase II 19 kDa polypeptide [Zea mays]
gi|195658229|gb|ACG48582.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|413944600|gb|AFW77249.1| DNA-directed RNA polymerase
II polypeptide isoform 1 [Zea mays]
gi|413944601|gb|AFW77250.1| DNA-directed RNA polymerase
II polypeptide isoform 2 [Zea mays]
gi|413944602|gb|AFW77251.1| DNA-directed RNA polymerase
II polypeptide isoform 3 [Zea mays]
Length = 175
Score = 105 bits (263), Expect(2) = 7e-40
Identities = 47/74 (63%), Positives = 62/74 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGP+E +F++EK+M +Y ++ GEN +F N+ H KLEKD+ VRFKVLGF+WME DR F
Sbjct: 103 FLKSGPVESIFLAEKSMSNYKYIGGENAMFMND-HSKLEKDTAVRFKVLGFRWMEADRQF 161
Query: 301 MVLATLAGDYLGPL 260
+LAT+AGD+LGPL
Sbjct: 162 QLLATIAGDFLGPL 175
Score = 85.5 bits (210), Expect(2) = 7e-40
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFLE E+ W+VLISP QLD LED+ R+ASKEHG Y+AV L ++
Sbjct: 1 MVFLEAEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNRRASKEHGYYIAVNQLKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>dbj|BAK04600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 105 bits (261), Expect(2) = 4e-39
Identities = 47/74 (63%), Positives = 62/74 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEK+M DY ++ GENP+F + H KLE+D+ VRFKV+GF+WME +R F
Sbjct: 103 FLKSGPIESIFLSEKSMSDYKYMGGENPMFMKD-HSKLERDTAVRFKVMGFRWMEAERQF 161
Query: 301 MVLATLAGDYLGPL 260
+LA+LAGD+LGPL
Sbjct: 162 QLLASLAGDFLGPL 175
Score = 84.0 bits (206), Expect(2) = 4e-39
Identities = 43/74 (58%), Positives = 49/74 (66%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+ E+ W+VLISPDQL LEDI RKAS EHG Y+AV L ++
Sbjct: 1 MVFLQEEMSWNVLISPDQLSPKGLLLRKSIIVRLLEDITNRKASNEHGYYIAVNELKTIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>gb|EEE62799.1| hypothetical protein OsJ_17602 [Oryza sativa Japonica Group]
Length = 796
Score = 99.8 bits (247), Expect(2) = 7e-37
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEKT+ DY ++ GENP+F N+ H KLEKD+ VRFKV+GF+WME DR F
Sbjct: 103 FLKSGPIESIFLSEKTLSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGFRWMEADRQF 161
Query: 301 MVLATLA 281
+LATLA
Sbjct: 162 QILATLA 168
Score = 81.6 bits (200), Expect(2) = 7e-37
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+V++ W+VLISP +L LE+IA RKASK+HG Y+AV+ L ++
Sbjct: 1 MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAIS 60
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 61 EGKVRELTGDVLFP 74
>gb|AAS98454.2| putative receptor kinase [Oryza sativa Japonica Group]
Length = 715
Score = 99.8 bits (247), Expect(2) = 7e-37
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGPIE +F+SEKT+ DY ++ GENP+F N+ H KLEKD+ VRFKV+GF+WME DR F
Sbjct: 138 FLKSGPIESIFLSEKTLSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGFRWMEADRQF 196
Query: 301 MVLATLA 281
+LATLA
Sbjct: 197 QILATLA 203
Score = 81.6 bits (200), Expect(2) = 7e-37
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -3
Query: 720 MVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVA 541
MVFL+V++ W+VLISP +L LE+IA RKASK+HG Y+AV+ L ++
Sbjct: 36 MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAIS 95
Query: 540 EGKVRELTGDVLFP 499
EGKVRELTGDVLFP
Sbjct: 96 EGKVRELTGDVLFP 109
>gb|EMS61603.1| DNA-directed RNA polymerase II subunit RPB7 [Triticum urartu]
Length = 173
Score = 95.1 bits (235), Expect(2) = 1e-31
Identities = 44/74 (59%), Positives = 58/74 (78%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FLKSGP+E +F+ K+M DY ++ GENP+F + + KLEK + VRFKV+GF WME DR F
Sbjct: 101 FLKSGPMENIFMPAKSMSDYKYMGGENPMFMKD-YSKLEKHTIVRFKVMGFCWMEADRQF 159
Query: 301 MVLATLAGDYLGPL 260
+LAT+AGD+LGPL
Sbjct: 160 RLLATMAGDFLGPL 173
Score = 68.9 bits (167), Expect(2) = 1e-31
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = -3
Query: 702 ELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVAEGKVRE 523
E+ W+V+IS QL LED+ RKASKEHG Y+AV L +++GK+RE
Sbjct: 5 EMCWNVVISAGQLSPKGLLLRKSIIVRLLEDVTNRKASKEHGYYIAVNGLKEISDGKIRE 64
Query: 522 LTGDVLFP 499
LTGDVLFP
Sbjct: 65 LTGDVLFP 72
>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223538083|gb|EEF39694.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 89.0 bits (219), Expect(2) = 1e-31
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
F++ GPIE +++S M DY +V GENP+F N+K K+EKD VRF V+G KW+E +R F
Sbjct: 102 FIRCGPIENIYLSCMKMPDYHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAEREF 161
Query: 301 MVLATLAGDYLGPL 260
L +L GDYLGP+
Sbjct: 162 QALVSLEGDYLGPV 175
Score = 74.7 bits (182), Expect(2) = 1e-31
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = -3
Query: 717 VFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVAE 538
++L+V+LPW+V+IS + LDA LED A +KA+K+ G Y+AVT+L ++ E
Sbjct: 1 MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60
Query: 537 GKVRELTGDVLFP 499
GKVRE TGDVLFP
Sbjct: 61 GKVREHTGDVLFP 73
>gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isoform 1 [Theobroma
cacao] gi|508727775|gb|EOY19672.1| RNA polymerase
Rpb7-like, N-terminal domain isoform 2, partial
[Theobroma cacao]
Length = 176
Score = 91.3 bits (225), Expect(2) = 1e-30
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FL+ GP++ +++S M DY +V GEN IF N+KH K+EKD VRF V+G KW+E +R F
Sbjct: 102 FLRCGPVQNIYLSHLKMPDYHYVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAEREF 161
Query: 301 MVLATLAGDYLGPL 260
L +L GDYLGP+
Sbjct: 162 QALVSLEGDYLGPV 175
Score = 68.9 bits (167), Expect(2) = 1e-30
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -3
Query: 717 VFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVAE 538
+FL+V+LPW+V+I D L A L+D A +KA+K+ G ++AVT+L ++ +
Sbjct: 1 MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVHLLDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 537 GKVRELTGDVLFP 499
GKVR+ TGDVLFP
Sbjct: 61 GKVRQNTGDVLFP 73
>gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
Length = 176
Score = 90.9 bits (224), Expect(2) = 2e-30
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FL+ GP++ +++S M DY +V GEN IF N KH K+EKD VRF V+G KW+E +R F
Sbjct: 102 FLRCGPVQNIYLSHLKMPDYHYVPGENAIFMNEKHSKIEKDVVVRFIVIGTKWLEAEREF 161
Query: 301 MVLATLAGDYLGPL 260
L +L GDYLGP+
Sbjct: 162 QALVSLEGDYLGPV 175
Score = 68.9 bits (167), Expect(2) = 2e-30
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -3
Query: 717 VFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVAE 538
+FL+V+LPW+V+I D L A L+D A +KA+K+ G ++AVT+L ++ +
Sbjct: 1 MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVRLLDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 537 GKVRELTGDVLFP 499
GKVR+ TGDVLFP
Sbjct: 61 GKVRQNTGDVLFP 73
>ref|XP_002314654.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 89.7 bits (221), Expect(2) = 3e-30
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = -2
Query: 478 LKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSFM 299
L+ GPIE +++S M DY +V GENP+F N+K K+EKD VRF VLG KW+E +R F
Sbjct: 120 LRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQ 179
Query: 298 VLATLAGDYLGPL 260
L +L GDYLGP+
Sbjct: 180 ALVSLEGDYLGPV 192
Score = 69.3 bits (168), Expect(2) = 3e-30
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = -3
Query: 723 KMVFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNV 544
K +FL+V+LPW+V+I + LDA L D A ++A+K+ G Y+AV++L ++
Sbjct: 16 KKMFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTLESI 75
Query: 543 AEGKVRELTGDVLFP 499
EGKVR+ TGDVLFP
Sbjct: 76 GEGKVRQHTGDVLFP 90
>ref|XP_006414666.1| hypothetical protein EUTSA_v10026369mg [Eutrema salsugineum]
gi|557115836|gb|ESQ56119.1| hypothetical protein
EUTSA_v10026369mg [Eutrema salsugineum]
Length = 178
Score = 91.3 bits (225), Expect(2) = 4e-30
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
FL+ GP+E V++S M DY FV GENPIF N K +++ ++TVRF VL KWME D+ F
Sbjct: 102 FLRCGPVENVYLSSAKMLDYKFVPGENPIFMNEKMSRIQVETTVRFVVLATKWMEVDKEF 161
Query: 301 MVLATLAGDYLGPL 260
LA+L GDYLGP+
Sbjct: 162 QALASLQGDYLGPI 175
Score = 67.4 bits (163), Expect(2) = 4e-30
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = -3
Query: 717 VFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVAE 538
+FL+VELPW+V+I + +DA LE AL+KA+ E G Y+ VT+L + E
Sbjct: 1 MFLKVELPWNVMIPAENMDAKGLMLKRAILVQLLEAFALKKATVELGYYLTVTTLDKIGE 60
Query: 537 GKVRELTGDVLFP 499
GK+RE TG+++FP
Sbjct: 61 GKIREQTGEIMFP 73
>ref|NP_193202.2| DNA-directed RNA polymerase V subunit NRPE7 [Arabidopsis thaliana]
gi|544604203|sp|A6QRA1.1|NRPE7_ARATH RecName:
Full=DNA-directed RNA polymerase V subunit 7
gi|149944323|gb|ABR46204.1| At4g14660 [Arabidopsis
thaliana] gi|332658072|gb|AEE83472.1| DNA-directed RNA
polymerase V subunit NRPE7 [Arabidopsis thaliana]
Length = 178
Score = 88.6 bits (218), Expect(2) = 4e-30
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = -2
Query: 481 FLKSGPIEKVFISEKTMRDYWFVSGENPIFQNNKHCKLEKDSTVRFKVLGFKWMEDDRSF 302
F++ GPIE V++S M DY ++ GENPIF N K +++ ++TVR V+G KWME +R F
Sbjct: 102 FMRCGPIENVYLSYTKMPDYKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEVEREF 161
Query: 301 MVLATLAGDYLGPL 260
LA+L GDYLGPL
Sbjct: 162 QALASLEGDYLGPL 175
Score = 70.1 bits (170), Expect(2) = 4e-30
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = -3
Query: 717 VFLEVELPWHVLISPDQLDAXXXXXXXXXXXXXLEDIALRKASKEHGIYVAVTSLSNVAE 538
+FL+V+LPW+V+I + +DA LE A +KA+KE G YVAVT+L + E
Sbjct: 1 MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60
Query: 537 GKVRELTGDVLFP 499
GK+RE TG+VLFP
Sbjct: 61 GKIREHTGEVLFP 73