BLASTX nr result
ID: Stemona21_contig00011695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00011695
(1341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ... 442 e-121
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 442 e-121
gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theob... 442 e-121
ref|XP_002326192.1| predicted protein [Populus trichocarpa] 441 e-121
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei... 441 e-121
gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus pe... 433 e-119
ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [A... 432 e-118
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [... 427 e-117
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,... 426 e-117
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,... 417 e-114
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 417 e-114
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 417 e-114
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 417 e-114
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,... 416 e-114
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,... 414 e-113
ref|XP_004493986.1| PREDICTED: RNA polymerase sigma factor sigF,... 413 e-113
ref|XP_004493985.1| PREDICTED: RNA polymerase sigma factor sigF,... 413 e-113
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,... 413 e-113
ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF,... 413 e-112
ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF,... 413 e-112
>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
Length = 572
Score = 442 bits (1137), Expect = e-121
Identities = 209/337 (62%), Positives = 273/337 (81%), Gaps = 1/337 (0%)
Frame = +3
Query: 90 VHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEV 269
VH+ + S ++++KI + + DPL+LF WGPET++LLT KEE L +IQ LMRLEEV
Sbjct: 235 VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEV 294
Query: 270 KQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQ 449
K+RLQ REPT+ EWA+AVG++C VLQS LHSGN SR+K+IY+N R+VVH+AK+Y+ +
Sbjct: 295 KKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGR 354
Query: 450 GLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVY 629
GLN+QDLLQEGSMGLM S+EKFKP +GCRF +YAYWWIRQ++RKAIFQHSRTIRLPEN+Y
Sbjct: 355 GLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMY 414
Query: 630 ALLKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDA 806
+LL ++K+A+R FIQEGH PT E++A RVGIT++KL+ LL +R P+S+Q+ WADQD
Sbjct: 415 SLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDT 474
Query: 807 TIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIG 986
T QE+TAD +EIPD+ +A++LMRQH R+LL +LTPKER+II+LR+GI D I ++LSEIG
Sbjct: 475 TFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIG 534
Query: 987 DILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
+ SKER+RQ+E RAL+KLK C GL +Y DLL
Sbjct: 535 LVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 571
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 442 bits (1137), Expect = e-121
Identities = 209/337 (62%), Positives = 273/337 (81%), Gaps = 1/337 (0%)
Frame = +3
Query: 90 VHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEV 269
VH+ + S ++++KI + + DPL+LF WGPET++LLT KEE L +IQ LMRLEEV
Sbjct: 224 VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEV 283
Query: 270 KQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQ 449
K+RLQ REPT+ EWA+AVG++C VLQS LHSGN SR+K+IY+N R+VVH+AK+Y+ +
Sbjct: 284 KKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGR 343
Query: 450 GLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVY 629
GLN+QDLLQEGSMGLM S+EKFKP +GCRF +YAYWWIRQ++RKAIFQHSRTIRLPEN+Y
Sbjct: 344 GLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMY 403
Query: 630 ALLKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDA 806
+LL ++K+A+R FIQEGH PT E++A RVGIT++KL+ LL +R P+S+Q+ WADQD
Sbjct: 404 SLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDT 463
Query: 807 TIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIG 986
T QE+TAD +EIPD+ +A++LMRQH R+LL +LTPKER+II+LR+GI D I ++LSEIG
Sbjct: 464 TFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIG 523
Query: 987 DILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
+ SKER+RQ+E RAL+KLK C GL +Y DLL
Sbjct: 524 LVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 560
>gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
Length = 568
Score = 442 bits (1136), Expect = e-121
Identities = 207/337 (61%), Positives = 273/337 (81%), Gaps = 1/337 (0%)
Frame = +3
Query: 90 VHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEV 269
+ + S D+R+K+ + + NDPL+LF WGPETKQLLT KEE L +++QNLMRLE+V
Sbjct: 231 IRETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRLEKV 290
Query: 270 KQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQ 449
K +LQ QF REPTL EWA+A+G+ C LQ+ LHSGN SR K+IY+N R+VVH+AK+Y+ +
Sbjct: 291 KSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAKQYQSR 350
Query: 450 GLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVY 629
GL++QDLLQEGSMGLMKS+E+FKP+ GCRF TYAYWWIRQ+IRK+I QHSRT+RLPENV+
Sbjct: 351 GLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTVRLPENVH 410
Query: 630 ALLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDA 806
LL ++ DA++S+I+EG H P+ E+LARRVGITV+KL+ LL ++R P+S+Q+ W DQD
Sbjct: 411 TLLSKVLDAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQQSVWVDQDI 470
Query: 807 TIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIG 986
T QE+T D +EIPD+ +A++LMRQH R+LL +L+P+ER II+LR+GI + SLSEIG
Sbjct: 471 TFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEESKENSLSEIG 530
Query: 987 DILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
++ LSKER+RQ+ESRAL KLK C + GLGAYVDLL
Sbjct: 531 NMFGLSKERVRQLESRALYKLKQCLNKHGLGAYVDLL 567
>ref|XP_002326192.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 441 bits (1135), Expect = e-121
Identities = 213/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)
Frame = +3
Query: 84 DVVHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLE 263
D++ + S + DI+K++ + + NDPL+LF WGPETKQLLT KEE L ++IQ+LM LE
Sbjct: 196 DLIFETYDSKSADIQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLE 255
Query: 264 EVKQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYE 443
VK RL+ QF REPTL EWAQAVG++CHVL+ LHSGN SR K+I +N R+VVH+AK+Y+
Sbjct: 256 GVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIAKRYQ 315
Query: 444 VQGLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPEN 623
+GL +QDLLQEG++GLMKS+EKFKP++GCRF TYAYWWIRQ+I KAIFQHSRTIRLPEN
Sbjct: 316 NRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPEN 375
Query: 624 VYALLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQ 800
VY LL ++ +A+RS+IQEG H PT E++ARRVGI + KLE LL +R P+S+Q+ W+DQ
Sbjct: 376 VYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQ 435
Query: 801 DATIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSE 980
+ T QEITAD E+EIPD+ +A++LMR+H R LL IL+ KER+II+LR+GI D +KSLSE
Sbjct: 436 NTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQKSLSE 495
Query: 981 IGDILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
IG++ LSKER+RQ+ESRAL KLK C GL AY DLL
Sbjct: 496 IGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADLL 534
>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
FACTOR family protein [Populus trichocarpa]
Length = 535
Score = 441 bits (1134), Expect = e-121
Identities = 212/339 (62%), Positives = 273/339 (80%), Gaps = 1/339 (0%)
Frame = +3
Query: 84 DVVHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLE 263
D++ + S + D++K++ + + NDPL+LF WGPETKQLLT KEE L ++IQ+LM LE
Sbjct: 196 DLIFETYDSKSADVQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLE 255
Query: 264 EVKQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYE 443
VK RL+ QF REPTL EWAQAVG++CHVL+ LHSGN SR K+I +N R+VVH+AK+Y+
Sbjct: 256 GVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIAKRYQ 315
Query: 444 VQGLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPEN 623
+GL +QDLLQEG++GLMKS+EKFKP++GCRF TYAYWWIRQ+I KAIFQHSRTIRLPEN
Sbjct: 316 NRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPEN 375
Query: 624 VYALLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQ 800
VY LL ++ +A+RS+IQEG H PT E++ARRVGI + KLE LL +R P+S+Q+ W+DQ
Sbjct: 376 VYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQ 435
Query: 801 DATIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSE 980
+ T QEITAD E+EIPD+ +A++LMR+H R LL IL+ KER+II+LR+GI D +KSLSE
Sbjct: 436 NTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQKSLSE 495
Query: 981 IGDILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
IG++ LSKER+RQ+ESRAL KLK C GL AY DLL
Sbjct: 496 IGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADLL 534
>gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
Length = 568
Score = 433 bits (1113), Expect = e-119
Identities = 212/336 (63%), Positives = 267/336 (79%), Gaps = 1/336 (0%)
Frame = +3
Query: 93 HDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVK 272
H+ N D+RKKI + NDPL+LF WGPET+QLLT KEE L + +Q+L +LEEVK
Sbjct: 232 HESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVK 291
Query: 273 QRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQG 452
RLQ QF REPTL EWA+AVG++C +L+S L SG SR K+IY+N R+VVH+AK+Y+ +G
Sbjct: 292 SRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRG 351
Query: 453 LNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYA 632
L +QDL+QEGSMGLMKS+EKFKP++GCRF TYAYWWIRQ++RKAIFQHSRTIRLPENVY+
Sbjct: 352 LGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYS 411
Query: 633 LLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDAT 809
LL ++ +A++S IQEG H P E+LARRVGITV+KLE LL ++R P+S+Q+ WADQD T
Sbjct: 412 LLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTT 471
Query: 810 IQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGD 989
QE+TAD VEIPD+ +A++LMRQH R LL IL +ER+II+LRYGI D ++SLSEIG
Sbjct: 472 FQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLSEIGG 531
Query: 990 ILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
+ LSKER+RQ+ESRA KL+ QGLGAY LL
Sbjct: 532 MFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLL 567
>ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
gi|548832038|gb|ERM94834.1| hypothetical protein
AMTR_s00009p00072720 [Amborella trichopoda]
Length = 573
Score = 432 bits (1111), Expect = e-118
Identities = 216/335 (64%), Positives = 266/335 (79%), Gaps = 4/335 (1%)
Frame = +3
Query: 108 SMNLDIRKKIVK----NLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQ 275
S N +I KK K + + NDPL+ F WGP TKQLLT KEE LF +IQ+LMR+EEVK+
Sbjct: 239 SANFEIGKKPEKVKNKSFDPNDPLRFFLWGPITKQLLTEKEESELFVKIQDLMRVEEVKK 298
Query: 276 RLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGL 455
L+ QF EPT+ EWA+A GM+ LQS +H G SR KMIY+NFRLVVHVAK Y+ +GL
Sbjct: 299 ELEMQFGCEPTVVEWARAAGMSYGSLQSCIHFGRKSREKMIYANFRLVVHVAKNYQGRGL 358
Query: 456 NIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYAL 635
+IQDLLQEGS+GLMKSLEKFKPK+GCRF TYAYWWIRQ+IRK++FQ+SRTIRLPENVY L
Sbjct: 359 SIQDLLQEGSVGLMKSLEKFKPKTGCRFSTYAYWWIRQAIRKSLFQNSRTIRLPENVYGL 418
Query: 636 LKRIKDARRSFIQEGHLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATIQ 815
L +IK+ARR + QEGH PTNE+LA+RVGITV KLE++ S+ P+SIQ+ W+DQD TIQ
Sbjct: 419 LTKIKNARRLYFQEGHRPTNEELAQRVGITVDKLETVRVFSKLPVSIQQPVWSDQDVTIQ 478
Query: 816 EITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDIL 995
EITADP+VE P+ +A++LMR+H R+LL +L P+ERQ+I LR+GI RKSLSEIG +
Sbjct: 479 EITADPKVETPEKNVAKQLMRRHVRNLLSLLNPRERQVINLRFGIQGRERKSLSEIGGMF 538
Query: 996 CLSKERIRQIESRALNKLKGCFQEQGLGAYVDLLN 1100
+SKERIRQ+ES+AL KLK C Q QGL Y +LLN
Sbjct: 539 NVSKERIRQVESKALEKLKNCTQTQGLEVYAELLN 573
>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 548
Score = 427 bits (1099), Expect = e-117
Identities = 208/339 (61%), Positives = 265/339 (78%), Gaps = 1/339 (0%)
Frame = +3
Query: 84 DVVHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLE 263
++ H+ S ++KKI + + DPL+LF WGPETKQLLT KEE L ++Q+LM LE
Sbjct: 209 EIFHEPYSSRRAGVQKKINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDLMSLE 268
Query: 264 EVKQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYE 443
VK++ + QF R+PTL EWA AVG++ V+QS LHSGN SR K+I +N R+VVH+AK+Y+
Sbjct: 269 NVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVHIAKQYQ 328
Query: 444 VQGLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPEN 623
+GL++QDLLQEGSMGLMKS+EKFKP+ GCRF TYAYWWIRQ++RKAIFQHSRTIRLPEN
Sbjct: 329 GRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRTIRLPEN 388
Query: 624 VYALLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQ 800
VY L ++ +A+RS+I EG H PT E+LA+R+GIT +LE LL +R P+S+Q+ WADQ
Sbjct: 389 VYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVRLERLLYMARMPLSMQQTVWADQ 448
Query: 801 DATIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSE 980
+ T QEITAD EVEIP+L +A++LMR+H SLL IL P+ER+II+LRYGI D +KSLSE
Sbjct: 449 ETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNILNPRERKIIRLRYGIEDGKKKSLSE 508
Query: 981 IGDILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
IG + LSKER+RQ+ESRAL KLK C GL AY DLL
Sbjct: 509 IGSVFGLSKERVRQLESRALYKLKQCLASHGLEAYADLL 547
>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 554
Score = 426 bits (1096), Expect = e-117
Identities = 207/336 (61%), Positives = 268/336 (79%), Gaps = 1/336 (0%)
Frame = +3
Query: 93 HDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVK 272
++ + S + D+R+K + L NDPL+LF WGPET+QLLT+KEE L + +Q++ +LE VK
Sbjct: 218 YENSSSNSSDLRRKYREGLNPNDPLRLFLWGPETRQLLTLKEETELIARVQDVFKLEAVK 277
Query: 273 QRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQG 452
RLQ QF REPTL EWA+AVG++C +LQS L G SR K+IYSN R+VVH+AK+Y+ +G
Sbjct: 278 SRLQSQFGREPTLIEWAEAVGISCQMLQSQLRCGTSSREKLIYSNLRMVVHIAKQYQGRG 337
Query: 453 LNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYA 632
L +QDLLQEGSMGLMKS+EKFKP++GCRF TYAYWW+RQ+IRKAIFQHSRTIRLPENVY
Sbjct: 338 LGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRTIRLPENVYT 397
Query: 633 LLKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDAT 809
LL ++ +A++S+IQEG+ P+ E+LARRVG++V+KL LL +R P+S+Q+ WADQD T
Sbjct: 398 LLGKVLEAKKSYIQEGNQNPSREELARRVGMSVEKLGKLLYCTRMPVSMQQTVWADQDTT 457
Query: 810 IQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGD 989
QE+TAD +EIPDL +A++LMRQH R+LL L +ERQII+LRYGI D ++SL+EIG+
Sbjct: 458 FQEVTADTGIEIPDLSVAKQLMRQHVRNLLHTLEKRERQIIRLRYGIEDGKQRSLTEIGE 517
Query: 990 ILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
I LSKER+RQ+ESRA KLK QGLGAY LL
Sbjct: 518 IFGLSKERVRQLESRAFLKLKESLGSQGLGAYAPLL 553
>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Glycine max]
Length = 575
Score = 417 bits (1072), Expect = e-114
Identities = 204/328 (62%), Positives = 262/328 (79%), Gaps = 1/328 (0%)
Frame = +3
Query: 117 LDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQRLQEQFN 296
L KK + L+ +DPL+LF WGPETKQLLT+++E L S+IQ+L+RLEEVK LQ QF
Sbjct: 247 LRAEKKKNEELDQDDPLRLFLWGPETKQLLTLEQESQLISQIQDLLRLEEVKTNLQSQFG 306
Query: 297 REPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGLNIQDLLQ 476
REPT+AEWA+ G+ C +LQS LHSGN SR K+I +N R+VVHVAK Y+ +GL++QDLLQ
Sbjct: 307 REPTMAEWAEGAGLNCRLLQSQLHSGNRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQ 366
Query: 477 EGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYALLKRIKDA 656
EGSMGLMKS+EKF P +G RF YA+WWIRQ+IRKA+F+HSRTIRLPE V+ LL ++ +A
Sbjct: 367 EGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEA 426
Query: 657 RRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATIQEITADP 833
++ +IQEG+L PT E+LARRVG+TV+K++ LL S+R PIS+Q+ WADQ+ T QEITADP
Sbjct: 427 KKLYIQEGNLHPTKEELARRVGVTVEKIDKLLFSARIPISMQQTVWADQNTTFQEITADP 486
Query: 834 EVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDILCLSKER 1013
VE D+ + ++LMR+H ++L +L PKER+II+LRYG D +KSLSEIGDI LSKER
Sbjct: 487 TVEATDVTVEKQLMRRHVLNVLSVLHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKER 546
Query: 1014 IRQIESRALNKLKGCFQEQGLGAYVDLL 1097
+RQ+E RAL KLK C +QGL AYVDLL
Sbjct: 547 VRQLEIRALYKLKKCLVKQGLDAYVDLL 574
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 417 bits (1072), Expect = e-114
Identities = 203/336 (60%), Positives = 262/336 (77%), Gaps = 1/336 (0%)
Frame = +3
Query: 93 HDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVK 272
H+ S ++KK+ + + NDPL+LF WGPET++LLT EE L ++IQ+L+RLE+ K
Sbjct: 225 HETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEK 284
Query: 273 QRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQG 452
+LQ QF REPTL EWA+A+G++C L+S LHSGN SR K+I +N RLVVHVAK+Y+ +G
Sbjct: 285 SKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRG 344
Query: 453 LNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYA 632
+ + DLLQEGSMGLMKS+EKFKP++GCRF +YAYWW+RQ+IRKAIFQHSRTIRLPEN+Y
Sbjct: 345 IGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYT 404
Query: 633 LLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDAT 809
LL R+ +A+R +IQEG H P EDLARRVGITV+KLE L+ +R P+S+Q+ WADQD T
Sbjct: 405 LLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTT 464
Query: 810 IQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGD 989
QEITAD VEIPD+ + ++LMRQH R+LL +L PKER I++LR+GI D KSLSE+G+
Sbjct: 465 FQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGN 524
Query: 990 ILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
I LSKER+RQ+ESRAL +LK + Y DLL
Sbjct: 525 IFGLSKERVRQLESRALYRLKQSLGGKASYGYADLL 560
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 417 bits (1072), Expect = e-114
Identities = 203/336 (60%), Positives = 262/336 (77%), Gaps = 1/336 (0%)
Frame = +3
Query: 93 HDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVK 272
H+ S ++KK+ + + NDPL+LF WGPET++LLT EE L ++IQ+L+RLE+ K
Sbjct: 233 HETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEK 292
Query: 273 QRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQG 452
+LQ QF REPTL EWA+A+G++C L+S LHSGN SR K+I +N RLVVHVAK+Y+ +G
Sbjct: 293 SKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRG 352
Query: 453 LNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYA 632
+ + DLLQEGSMGLMKS+EKFKP++GCRF +YAYWW+RQ+IRKAIFQHSRTIRLPEN+Y
Sbjct: 353 IGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYT 412
Query: 633 LLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDAT 809
LL R+ +A+R +IQEG H P EDLARRVGITV+KLE L+ +R P+S+Q+ WADQD T
Sbjct: 413 LLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTT 472
Query: 810 IQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGD 989
QEITAD VEIPD+ + ++LMRQH R+LL +L PKER I++LR+GI D KSLSE+G+
Sbjct: 473 FQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGN 532
Query: 990 ILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
I LSKER+RQ+ESRAL +LK + Y DLL
Sbjct: 533 IFGLSKERVRQLESRALYRLKQSLGGKASYGYADLL 568
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 417 bits (1072), Expect = e-114
Identities = 203/336 (60%), Positives = 262/336 (77%), Gaps = 1/336 (0%)
Frame = +3
Query: 93 HDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVK 272
H+ S ++KK+ + + NDPL+LF WGPET++LLT EE L ++IQ+L+RLE+ K
Sbjct: 234 HETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEK 293
Query: 273 QRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQG 452
+LQ QF REPTL EWA+A+G++C L+S LHSGN SR K+I +N RLVVHVAK+Y+ +G
Sbjct: 294 SKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRG 353
Query: 453 LNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYA 632
+ + DLLQEGSMGLMKS+EKFKP++GCRF +YAYWW+RQ+IRKAIFQHSRTIRLPEN+Y
Sbjct: 354 IGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYT 413
Query: 633 LLKRIKDARRSFIQEG-HLPTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDAT 809
LL R+ +A+R +IQEG H P EDLARRVGITV+KLE L+ +R P+S+Q+ WADQD T
Sbjct: 414 LLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTT 473
Query: 810 IQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGD 989
QEITAD VEIPD+ + ++LMRQH R+LL +L PKER I++LR+GI D KSLSE+G+
Sbjct: 474 FQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGN 533
Query: 990 ILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
I LSKER+RQ+ESRAL +LK + Y DLL
Sbjct: 534 IFGLSKERVRQLESRALYRLKQSLGGKASYGYADLL 569
>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Solanum tuberosum]
Length = 562
Score = 416 bits (1070), Expect = e-114
Identities = 203/340 (59%), Positives = 268/340 (78%), Gaps = 1/340 (0%)
Frame = +3
Query: 81 TDVVHDVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRL 260
T V + NRS D+R+K+ ++++ NDPL++F WGPETKQLLT KEE L +IQ M+L
Sbjct: 222 TQQVQETNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKL 281
Query: 261 EEVKQRLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKY 440
+EVK +LQ QF EPT EWA+A G+T L+S L SG SR K+I +N R+VVH+AK+Y
Sbjct: 282 QEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIAKQY 341
Query: 441 EVQGLNIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPE 620
+ +GLN+QDLLQEGSMGLMKS+EKFKP++GCRFPTYAYWWIRQS+RKAIFQHSRTIRLPE
Sbjct: 342 QGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIRLPE 401
Query: 621 NVYALLKRIKDARRSFIQEGH-LPTNEDLARRVGITVQKLESLLASSRNPISIQERAWAD 797
NVYALL ++KDA++ IQ+G+ PT ED+A G++V++L++LL++ R P+S+Q+ W+D
Sbjct: 402 NVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSD 461
Query: 798 QDATIQEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLS 977
QD T QEITAD +E P+L ++++LMR+H R LL +L+PKER+II+LR+GI D KSLS
Sbjct: 462 QDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGDGKPKSLS 521
Query: 978 EIGDILCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
EIG + LSKER+RQ+E+RAL KLK + GL AY DLL
Sbjct: 522 EIGTVFGLSKERVRQLETRALYKLKQNLNKHGLDAYSDLL 561
>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Glycine max]
Length = 554
Score = 414 bits (1065), Expect = e-113
Identities = 200/335 (59%), Positives = 267/335 (79%), Gaps = 1/335 (0%)
Frame = +3
Query: 96 DVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQ 275
DV R + L+ KK+ + + NDPL+LF GPE++QLLT +EE L +++Q+L RLEEVK
Sbjct: 221 DVQRRLRLE--KKLKEGYDPNDPLRLFLSGPESRQLLTREEESQLITQLQDLSRLEEVKI 278
Query: 276 RLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGL 455
RLQ Q REPTLAEWA AVG +C+ LQ+ LH N S+ K+ ++N R+VVH+AK Y+ +GL
Sbjct: 279 RLQTQLRREPTLAEWADAVGHSCYALQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGL 338
Query: 456 NIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYAL 635
++QDL QEGS GLMKS+EKFKP++GCRF TYAYWWIR ++RKAIF HSRTIRLPEN+Y L
Sbjct: 339 SLQDLFQEGSTGLMKSIEKFKPEAGCRFGTYAYWWIRHAVRKAIFLHSRTIRLPENLYTL 398
Query: 636 LKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATI 812
L ++ +A++S+IQEG+L PT E+LAR+VGIT++K+++LL +SRNPIS+Q+ WADQD T
Sbjct: 399 LGKVIEAKKSYIQEGNLHPTKEELARKVGITIEKMDNLLFASRNPISMQQTVWADQDTTF 458
Query: 813 QEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDI 992
QEITAD +EIPD+ ++++LMR H +LL IL+PKER II+LR+GI D K+LS+IG +
Sbjct: 459 QEITADSAIEIPDVTVSKQLMRMHVHNLLNILSPKERGIIRLRFGIEDGEEKTLSDIGKV 518
Query: 993 LCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
L+KER+RQ+ESRAL KL+ C + QGL AY DLL
Sbjct: 519 FGLTKERVRQLESRALLKLRQCLESQGLDAYTDLL 553
>ref|XP_004493986.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Cicer arietinum]
Length = 544
Score = 413 bits (1062), Expect = e-113
Identities = 199/335 (59%), Positives = 264/335 (78%), Gaps = 1/335 (0%)
Frame = +3
Query: 96 DVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQ 275
DV R L I KK+ + LE NDPL+LF WGPETK+LL ++EE L ++IQ+L+RL+E
Sbjct: 211 DVQR--RLRIEKKLKEGLEGNDPLRLFLWGPETKRLLNLEEESKLIAQIQDLLRLKETNI 268
Query: 276 RLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGL 455
+LQ QF REPTLAEWA VG++C LQ+ LH GN S+ K+I +N RLVVH+AK Y+ +GL
Sbjct: 269 KLQSQFGREPTLAEWADGVGLSCRALQARLHCGNRSKDKLINANLRLVVHIAKYYQGRGL 328
Query: 456 NIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYAL 635
++QDLLQEGSMGLM+ +EKFKPK+GCRF TYAYWWIRQ+IR+A+F HS+TIRLPEN Y L
Sbjct: 329 SLQDLLQEGSMGLMRGVEKFKPKAGCRFSTYAYWWIRQTIRRALFLHSKTIRLPENFYTL 388
Query: 636 LKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATI 812
L ++ +A++S+I+EG+L PT E++AR+VGITV KLE LL ++R P+S++ WADQD T
Sbjct: 389 LGKVTEAKKSYIKEGNLHPTKEEIARQVGITVDKLEMLLFTARTPLSMERAVWADQDTTF 448
Query: 813 QEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDI 992
QEITAD +EIP++ +A++LMR H R+LL +L PKER++I+LR+GI D KSLS+IG +
Sbjct: 449 QEITADSAIEIPNVSVAKQLMRSHVRNLLNVLNPKERRVIRLRFGIEDGYEKSLSDIGKV 508
Query: 993 LCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
L + KER+RQ+ES+ LNKLK Q L AYVDL+
Sbjct: 509 LGVCKERVRQLESQGLNKLKQNLVSQQLDAYVDLI 543
>ref|XP_004493985.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Cicer arietinum]
Length = 555
Score = 413 bits (1062), Expect = e-113
Identities = 199/335 (59%), Positives = 264/335 (78%), Gaps = 1/335 (0%)
Frame = +3
Query: 96 DVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQ 275
DV R L I KK+ + LE NDPL+LF WGPETK+LL ++EE L ++IQ+L+RL+E
Sbjct: 222 DVQR--RLRIEKKLKEGLEGNDPLRLFLWGPETKRLLNLEEESKLIAQIQDLLRLKETNI 279
Query: 276 RLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGL 455
+LQ QF REPTLAEWA VG++C LQ+ LH GN S+ K+I +N RLVVH+AK Y+ +GL
Sbjct: 280 KLQSQFGREPTLAEWADGVGLSCRALQARLHCGNRSKDKLINANLRLVVHIAKYYQGRGL 339
Query: 456 NIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYAL 635
++QDLLQEGSMGLM+ +EKFKPK+GCRF TYAYWWIRQ+IR+A+F HS+TIRLPEN Y L
Sbjct: 340 SLQDLLQEGSMGLMRGVEKFKPKAGCRFSTYAYWWIRQTIRRALFLHSKTIRLPENFYTL 399
Query: 636 LKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATI 812
L ++ +A++S+I+EG+L PT E++AR+VGITV KLE LL ++R P+S++ WADQD T
Sbjct: 400 LGKVTEAKKSYIKEGNLHPTKEEIARQVGITVDKLEMLLFTARTPLSMERAVWADQDTTF 459
Query: 813 QEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDI 992
QEITAD +EIP++ +A++LMR H R+LL +L PKER++I+LR+GI D KSLS+IG +
Sbjct: 460 QEITADSAIEIPNVSVAKQLMRSHVRNLLNVLNPKERRVIRLRFGIEDGYEKSLSDIGKV 519
Query: 993 LCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
L + KER+RQ+ES+ LNKLK Q L AYVDL+
Sbjct: 520 LGVCKERVRQLESQGLNKLKQNLVSQQLDAYVDLI 554
>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Solanum lycopersicum]
Length = 563
Score = 413 bits (1062), Expect = e-113
Identities = 202/333 (60%), Positives = 266/333 (79%), Gaps = 1/333 (0%)
Frame = +3
Query: 102 NRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQRL 281
NRS D+R+K+ ++++ NDPL++F WGPETKQLLT KEE L +IQ M+L+EVK +L
Sbjct: 230 NRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQL 289
Query: 282 QEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGLNI 461
Q QF REPT EWA+A G+T L+S L SG SR K+I +N R+VVH+AK+Y+ +GLN+
Sbjct: 290 QIQFAREPTSLEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIAKQYQGRGLNL 349
Query: 462 QDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYALLK 641
QDLLQEGSMGLMKS+EKFKP++GCRFPTYAYWWIRQS+RKAIFQHSRTIRLPENVYALL
Sbjct: 350 QDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLS 409
Query: 642 RIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATIQE 818
++KDA+R I++G+ PT ED+A G++V++L++LL++ R P+S+Q+ W+DQD T QE
Sbjct: 410 KVKDAKRECIRQGNRHPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQE 469
Query: 819 ITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDILC 998
ITAD +E P+L ++++LMR+H R LL +L+PKER+II+LR+GI D KSLSEIG +
Sbjct: 470 ITADNAIEAPELSVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGDGKPKSLSEIGAVFG 529
Query: 999 LSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
LSKER+RQ+E+RAL KLK + GL AY DLL
Sbjct: 530 LSKERVRQLETRALYKLKQNLNKHGLDAYSDLL 562
>ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Glycine max]
Length = 477
Score = 413 bits (1061), Expect = e-112
Identities = 199/335 (59%), Positives = 267/335 (79%), Gaps = 1/335 (0%)
Frame = +3
Query: 96 DVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQ 275
DV R + L+ KK+ + + NDPL+LF GPE++QLLT +EE L +++Q+L R EEVK
Sbjct: 144 DVQRRLRLE--KKLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKI 201
Query: 276 RLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGL 455
RLQ Q REPTLAEWA AVG++C+ LQ+ LH N S+ K+ ++N R+VVH+AK Y+ +GL
Sbjct: 202 RLQSQLRREPTLAEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGL 261
Query: 456 NIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYAL 635
++QDL QEGS GLMKS++KFKP++GCRF TYAYWWIR +IRKAIF HSRTIRLPEN+Y L
Sbjct: 262 SLQDLFQEGSTGLMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTL 321
Query: 636 LKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATI 812
L ++ +A++S+IQEG+L PT E+LARRVGITV+KL++LL +SRNPIS+Q+ W DQD T
Sbjct: 322 LGKLIEAKKSYIQEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTF 381
Query: 813 QEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDI 992
QEITAD +EIP + ++++LMR+H +LL IL+PKE+ II+LR+GI D K+LS+IG +
Sbjct: 382 QEITADSAIEIPGVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKV 441
Query: 993 LCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
L+KER+RQ+E RAL+KLK C + QGL AY+DLL
Sbjct: 442 FGLTKERVRQLECRALSKLKQCLESQGLDAYIDLL 476
>ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Glycine max]
Length = 554
Score = 413 bits (1061), Expect = e-112
Identities = 199/335 (59%), Positives = 267/335 (79%), Gaps = 1/335 (0%)
Frame = +3
Query: 96 DVNRSMNLDIRKKIVKNLESNDPLKLFFWGPETKQLLTIKEEKALFSEIQNLMRLEEVKQ 275
DV R + L+ KK+ + + NDPL+LF GPE++QLLT +EE L +++Q+L R EEVK
Sbjct: 221 DVQRRLRLE--KKLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKI 278
Query: 276 RLQEQFNREPTLAEWAQAVGMTCHVLQSTLHSGNHSRRKMIYSNFRLVVHVAKKYEVQGL 455
RLQ Q REPTLAEWA AVG++C+ LQ+ LH N S+ K+ ++N R+VVH+AK Y+ +GL
Sbjct: 279 RLQSQLRREPTLAEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGL 338
Query: 456 NIQDLLQEGSMGLMKSLEKFKPKSGCRFPTYAYWWIRQSIRKAIFQHSRTIRLPENVYAL 635
++QDL QEGS GLMKS++KFKP++GCRF TYAYWWIR +IRKAIF HSRTIRLPEN+Y L
Sbjct: 339 SLQDLFQEGSTGLMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTL 398
Query: 636 LKRIKDARRSFIQEGHL-PTNEDLARRVGITVQKLESLLASSRNPISIQERAWADQDATI 812
L ++ +A++S+IQEG+L PT E+LARRVGITV+KL++LL +SRNPIS+Q+ W DQD T
Sbjct: 399 LGKLIEAKKSYIQEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTF 458
Query: 813 QEITADPEVEIPDLFIARKLMRQHTRSLLRILTPKERQIIQLRYGINDHIRKSLSEIGDI 992
QEITAD +EIP + ++++LMR+H +LL IL+PKE+ II+LR+GI D K+LS+IG +
Sbjct: 459 QEITADSAIEIPGVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKV 518
Query: 993 LCLSKERIRQIESRALNKLKGCFQEQGLGAYVDLL 1097
L+KER+RQ+E RAL+KLK C + QGL AY+DLL
Sbjct: 519 FGLTKERVRQLECRALSKLKQCLESQGLDAYIDLL 553