BLASTX nr result
ID: Stemona21_contig00009459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00009459
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 100 3e-19
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 100 3e-19
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 95 1e-17
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 92 7e-17
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no... 89 8e-16
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 88 1e-15
ref|XP_002310028.1| hypothetical protein POPTRDRAFT_654879 [Popu... 87 3e-15
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 84 2e-14
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 84 2e-14
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe... 84 2e-14
ref|XP_004173684.1| PREDICTED: probable RNA-dependent RNA polyme... 83 3e-14
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 83 3e-14
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 83 4e-14
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 83 4e-14
ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group] g... 80 2e-13
sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 80 2e-13
gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japo... 80 2e-13
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 78 1e-12
ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 77 2e-12
gb|EOY15730.1| RNA-dependent RNA polymerase family protein, puta... 76 4e-12
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = -2
Query: 266 EEVWQLPCFSRE-VPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLY 90
+E+W+LP F+ + VPQ+CL+ W++RY Y +EM + E K+ A+E+I KYK +LY
Sbjct: 795 KEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILY 854
Query: 89 GAAVFEESPRKREEIFDEALAIYQISYSY 3
GAA FEESPR E+IFDEALAIY ++Y +
Sbjct: 855 GAAEFEESPRNLEDIFDEALAIYHVTYEF 883
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = -2
Query: 266 EEVWQLPCFSRE-VPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLY 90
+E+W+LP F+ + VPQ+CL+ W++RY Y +EM + E K+ A+E+I KYK +LY
Sbjct: 809 KEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILY 868
Query: 89 GAAVFEESPRKREEIFDEALAIYQISYSY 3
GAA FEESPR E+IFDEALAIY ++Y +
Sbjct: 869 GAAEFEESPRNLEDIFDEALAIYHVTYEF 897
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/85 (50%), Positives = 59/85 (69%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
E+ +LPCF E+PQ C+ LW RY +Y +M M D E + +E+I+KYK+LLYGA
Sbjct: 880 EISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGA 939
Query: 83 AVFEESPRKREEIFDEALAIYQISY 9
FE++ RK E+IFDEALAIY ++Y
Sbjct: 940 VEFEQTVRKTEDIFDEALAIYHVTY 964
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 230 VPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGAAVFEESPRKRE 51
VPQ+CL+ W++RY Y +EM + E K+ A+E+I KYK +LYGAA FEESPRK E
Sbjct: 1081 VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRKLE 1140
Query: 50 EIFDEALAIYQISYSY 3
+IFDEALAIY ++Y +
Sbjct: 1141 DIFDEALAIYHVTYEF 1156
>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
Length = 521
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = -2
Query: 266 EEVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYG 87
+E+++LP F EVP++CL W+ Y+DY ++M +L K A E+ +KYK LLYG
Sbjct: 388 KEIFKLPHFEVEVPEACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYG 447
Query: 86 AAVFEESPRKREEIFDEALAIYQISYSY 3
A EES +K EEI++EALAIY + Y Y
Sbjct: 448 AEELEESTKKMEEIYNEALAIYHVCYDY 475
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/87 (47%), Positives = 60/87 (68%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
E+ +L F +P +CL+LWEERYR+Y EM+ + T E+KN LA ++I+KYK LLY A
Sbjct: 966 EIKKLSAFEVGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEA 1025
Query: 83 AVFEESPRKREEIFDEALAIYQISYSY 3
EES R +++++ALAIY ++Y Y
Sbjct: 1026 PDMEESIRSTTDMYNDALAIYCVTYDY 1052
>ref|XP_002310028.1| hypothetical protein POPTRDRAFT_654879 [Populus trichocarpa]
Length = 189
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
+VW+LPCF EV +SCL W+ Y Y EMR + +E KN A+E+I+KYK +LY A
Sbjct: 58 DVWKLPCFDGEVHESCLVKWKGLYGQYRTEMRNALQAGKE-KNNEANEVIKKYKEILYEA 116
Query: 83 AVFEESPRKREEIFDEALAIYQISYSY 3
A F S R+ EEIF+EA A+YQ++Y++
Sbjct: 117 AEFNLSRRRDEEIFEEARALYQVTYNH 143
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
+VW+LPCF EV + L W+E Y Y EMR + +E+ N A+E+I+KYK LY A
Sbjct: 746 DVWKLPCFDDEVHELYLVKWKELYGQYRKEMRNALKAGEES-NDKANEVIRKYKEFLYEA 804
Query: 83 AVFEESPRKREEIFDEALAIYQISYSY 3
A F S R+ EEIF+EA+A+YQ+SY++
Sbjct: 805 AEFNLSKRRDEEIFEEAMALYQVSYNH 831
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
+VW+LPCF EV + L W+E Y Y EMR + +E+ N A+E+I+KYK LY A
Sbjct: 768 DVWKLPCFDDEVHELYLVKWKELYGQYRKEMRNALKAGEES-NDKANEVIRKYKEFLYEA 826
Query: 83 AVFEESPRKREEIFDEALAIYQISYSY 3
A F S R+ EEIF+EA+A+YQ+SY++
Sbjct: 827 AEFNLSKRRDEEIFEEAMALYQVSYNH 853
>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = -2
Query: 266 EEVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVML-TDQENKNILASEIIQKYKLLLY 90
+EV +LP F EVP+ CLK W E Y+ Y +EM M D+++KN A ++++KYK +LY
Sbjct: 664 KEVKKLPMFDVEVPEECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILY 723
Query: 89 GAAV-FEESPRKREEIFDEALAIYQISYSY 3
G A E S R EIFDEALAIY+++Y +
Sbjct: 724 GGAEDLENSTRPLHEIFDEALAIYRVTYDH 753
>ref|XP_004173684.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like, partial
[Cucumis sativus]
Length = 149
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
EV +LPCF E+P+ W+ Y Y +M M D + KNI A I+KYK +LYGA
Sbjct: 47 EVQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGA 106
Query: 83 AVFEESPRKREEIFDEALAIYQISYSY 3
E SPR EE++ EALAIYQ++Y +
Sbjct: 107 EELEGSPRSNEEVYQEALAIYQVTYDH 133
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
EV +LPCF E+P+ W+ Y Y +M M D + KNI A I+KYK +LYGA
Sbjct: 925 EVQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGA 984
Query: 83 AVFEESPRKREEIFDEALAIYQISYSY 3
E SPR EE++ EALAIYQ++Y +
Sbjct: 985 EELEGSPRSNEEVYQEALAIYQVTYDH 1011
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
E+W+LPCF VP++C+ W+ Y Y EM+ + + A +I+KYK +LYGA
Sbjct: 881 EIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGA 940
Query: 83 AVFEESPRKREEIFDEALAIYQISY 9
A FE+S R EEI++EALAIY I+Y
Sbjct: 941 AEFEQSTRTLEEIYNEALAIYNITY 965
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -2
Query: 263 EVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGA 84
E+W+LPCF VP++C+ W+ Y Y EM+ + + A +I+KYK +LYGA
Sbjct: 883 EIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGA 942
Query: 83 AVFEESPRKREEIFDEALAIYQISY 9
A FE+S R EEI++EALAIY I+Y
Sbjct: 943 AEFEQSTRTLEEIYNEALAIYNITY 967
>ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group]
gi|56201772|dbj|BAD73222.1| RNA-dependent RNA polymerase
-like [Oryza sativa Japonica Group]
gi|56201879|dbj|BAD73329.1| RNA-dependent RNA polymerase
-like [Oryza sativa Japonica Group]
gi|113531835|dbj|BAF04218.1| Os01g0198000 [Oryza sativa
Japonica Group] gi|215693837|dbj|BAG89036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 582
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 251 LPCFS-REVPQSCLKLWEERYRDYLNEMRPVML--TDQENKNILASEIIQKYKLLLYGAA 81
LPCF+ R+VP + +LW+ RY +YL + + D+E K I E+ +KYK LLYGA+
Sbjct: 445 LPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYKHLLYGAS 504
Query: 80 VFEESPRKREEIFDEALAIYQISY 9
FEE+PR +++F EA AIYQI+Y
Sbjct: 505 EFEETPRDLDDVFSEACAIYQIAY 528
>sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 4; Short=OsRDR4
Length = 1183
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 251 LPCFS-REVPQSCLKLWEERYRDYLNEMRPVML--TDQENKNILASEIIQKYKLLLYGAA 81
LPCF+ R+VP + +LW+ RY +YL + + D+E K I E+ +KYK LLYGA+
Sbjct: 1046 LPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYKHLLYGAS 1105
Query: 80 VFEESPRKREEIFDEALAIYQISY 9
FEE+PR +++F EA AIYQI+Y
Sbjct: 1106 EFEETPRDLDDVFSEACAIYQIAY 1129
>gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japonica Group]
Length = 1148
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 251 LPCFS-REVPQSCLKLWEERYRDYLNEMRPVML--TDQENKNILASEIIQKYKLLLYGAA 81
LPCF+ R+VP + +LW+ RY +YL + + D+E K I E+ +KYK LLYGA+
Sbjct: 1011 LPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYKHLLYGAS 1070
Query: 80 VFEESPRKREEIFDEALAIYQISY 9
FEE+PR +++F EA AIYQI+Y
Sbjct: 1071 EFEETPRDLDDVFSEACAIYQIAY 1094
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = -2
Query: 266 EEVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVML-TDQENKNILASEIIQKYKLLLY 90
E++ LPCF EV S ++ W+ Y Y +EM + TDQ+ N A E+IQ YK +LY
Sbjct: 856 EDIELLPCFLEEVEPSGMEKWKGLYAQYRDEMNKALSSTDQKKSN--ADEVIQNYKKILY 913
Query: 89 GAAVFEESPRKREEIFDEALAIYQISYSY 3
GA +EE R REEIF EA IY ISY Y
Sbjct: 914 GAQEYEERTRPREEIFREACEIYAISYFY 942
>ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
3-like [Oryza brachyantha]
Length = 1109
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -2
Query: 251 LPCFS-REVPQSCLKLWEERYRDYLNEMRPVMLTDQENKNILASEIIQKYKLLLYGAAVF 75
LPCF+ R+ P +LW++RY +YL + R + D+E +N+ ++ +KYK +LY A+ F
Sbjct: 973 LPCFTERDAPPETKRLWQQRYEEYLTDSRLLYEVDKEERNMKFQKLYEKYKRMLYDASEF 1032
Query: 74 EESPRKREEIFDEALAIYQISY 9
E++PR +++F EA IYQI Y
Sbjct: 1033 EQTPRGFDDVFTEACVIYQIVY 1054
>gb|EOY15730.1| RNA-dependent RNA polymerase family protein, putative isoform 1
[Theobroma cacao]
Length = 328
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = -2
Query: 266 EEVWQLPCFSREVPQSCLKLWEERYRDYLNEMRPVMLT----DQENKNILASEIIQKYKL 99
+EV +LPCF PQ C + W E Y+ Y +M + T +E +++ A+ + KYK
Sbjct: 191 KEVRKLPCFDVGFPQDCREKWTELYKQYREDMTQTLQTLDGKSKELRDVAANAVYNKYKQ 250
Query: 98 LLYGAAVFEESPRKREEIFDEALAIYQISYSY 3
LYG AV E+ R ++I+ EALAIY ISY Y
Sbjct: 251 ELYGGAVLEQRQRPLDQIYKEALAIYNISYDY 282