BLASTX nr result
ID: Stemona21_contig00007458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00007458
(1225 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 237 6e-60
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 235 2e-59
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 235 3e-59
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 234 7e-59
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 229 1e-57
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 229 2e-57
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 221 4e-55
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 221 5e-55
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 221 5e-55
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 221 5e-55
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 220 8e-55
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 219 1e-54
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 219 1e-54
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 217 7e-54
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 217 7e-54
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put... 213 1e-52
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 208 3e-51
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 208 4e-51
gb|AFK40562.1| unknown [Lotus japonicus] 205 4e-50
gb|ESW07407.1| hypothetical protein PHAVU_010G127200g [Phaseolus... 202 2e-49
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 237 bits (605), Expect = 6e-60
Identities = 124/233 (53%), Positives = 158/233 (67%), Gaps = 2/233 (0%)
Frame = +2
Query: 188 SESRKVLPEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLK 367
S ++ PE + Q+ LT E+ Y+++RS+ +GI++ D+KKE L N+V+K LK
Sbjct: 60 SSLKRKRPELNSPVQS--LTEHERILYDVIRSKQDIGIWTRDMKKEA-KLPDNVVNKSLK 116
Query: 368 SLQAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYI 547
+L+ K LIK+VVNI+NK RK +MA +FEPSKEISGG WY G+LDT I ++ C I
Sbjct: 117 ALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQI 176
Query: 548 KNKTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAG 727
+ K VAT EV +N+ AF +++T Q EI+R LILD I EVKS GMG FAS+P G
Sbjct: 177 EKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPFG 236
Query: 728 KVCYRISSTG--GEATKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
KVCYR S G G K G +SIPCGVCPRIS CTPDGIISP TC+YY KWL
Sbjct: 237 KVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWL 289
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 235 bits (600), Expect = 2e-59
Identities = 124/233 (53%), Positives = 160/233 (68%), Gaps = 2/233 (0%)
Frame = +2
Query: 188 SESRKVLPEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLK 367
S ++ PE + Q+ LT E+ Y+++RS+ +GI++ D+KKE L N+V+K LK
Sbjct: 8 SSLKRKRPEVNSPAQS--LTEHERLLYDVIRSKQDIGIWTRDMKKEA-KLPDNVVNKSLK 64
Query: 368 SLQAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYI 547
+LQ K LIK+VVNI+NK RK +MA +FEPSKEISGG WY G+LDT I +K C I
Sbjct: 65 ALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQI 124
Query: 548 KNKTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAG 727
+ + VAT EV +N+ AF +++T Q EI+R LILD I EVKS GMG FAS+P G
Sbjct: 125 ERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPFG 184
Query: 728 KVCYR-ISSTG-GEATKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
+VCY+ IS G G K G +SIPCGVCPRIS+CTPDGIISP TC+YY KWL
Sbjct: 185 EVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWL 237
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 239
Score = 235 bits (599), Expect = 3e-59
Identities = 119/218 (54%), Positives = 150/218 (68%), Gaps = 2/218 (0%)
Frame = +2
Query: 233 TPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVVNIR 412
T LT E+ Y L+ S+ MGI++ D+K+E NL ++V K LK LQ+K LIK+VVNI+
Sbjct: 21 TGSLTDGERVLYNLIHSKKDMGIWTGDMKRET-NLPDSIVKKSLKLLQSKNLIKEVVNIQ 79
Query: 413 NKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVCSYL 592
NK RK YMAA+FEPSKEI+GG WY++G LDT I+ +K C YI + VAT V +
Sbjct: 80 NKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWS 139
Query: 593 NASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGE--A 766
S F +E+T Q EI+R L+LD +I EVKSTG G F+SVP G++CYR S GG
Sbjct: 140 RKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKGGNRGE 199
Query: 767 TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
K G +SIPCGVCPRI+ CTPDGIISP TC+YY KWL
Sbjct: 200 QKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 234 bits (596), Expect = 7e-59
Identities = 118/215 (54%), Positives = 151/215 (70%), Gaps = 2/215 (0%)
Frame = +2
Query: 242 LTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVVNIRNKN 421
+T E+ Y L+ S+ MGI++ D+K+E NL ++V K LK LQ+K LIK+VVNI+NK
Sbjct: 24 MTDGERVLYNLIHSKKDMGIWTGDMKRET-NLPDSIVKKSLKLLQSKNLIKEVVNIQNKG 82
Query: 422 RKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVCSYLNAS 601
RK YMAA+FEPSKEI+GG WY +G+LDT I+ +K C I + VAT V + S
Sbjct: 83 RKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKCIFRQKVATHDGVLEWSRKS 142
Query: 602 NAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGE--ATKG 775
F +E+T Q EI+RAL+LD +IEEVKSTG+G F+SVP G++CYR S GG K
Sbjct: 143 GVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPVGRICYRCKSKGGNRGEQKP 202
Query: 776 GIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
G +SIPCGVCPRI+ CTPDGIISP TC+YY KWL
Sbjct: 203 GAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 229 bits (585), Expect = 1e-57
Identities = 118/225 (52%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
Frame = +2
Query: 209 PEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGL 388
PE + Q+ LT EQ Y +RS+ MGI++ D+K+E NL +V+K LK LQAK L
Sbjct: 12 PESNSSAQS--LTEHEQALYNAIRSKQDMGIWTRDMKRET-NLPDTVVNKSLKVLQAKNL 68
Query: 389 IKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVAT 568
IK+VVNI+NK RK YMA +FEPSKEI+GGTWY G LDT I +K C I+ VAT
Sbjct: 69 IKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVAT 128
Query: 569 ATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRIS 748
V ++N + + +T Q EI++AL+LD K+ EVKS GMG FAS+P GKVCY+
Sbjct: 129 VEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKSI 188
Query: 749 STGGEA-TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
G K G +SIPCGVCPRI CTP+GIISP TC+YY KWL
Sbjct: 189 GKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWL 233
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 229 bits (583), Expect = 2e-57
Identities = 119/229 (51%), Positives = 151/229 (65%), Gaps = 4/229 (1%)
Frame = +2
Query: 206 LPEKQARHQTPP--LTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQA 379
L KQ +P LT E+ Y ++RS+ MGI++ D+KKE NL N+V K +KSLQA
Sbjct: 7 LKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEA-NLPDNLVGKSIKSLQA 65
Query: 380 KGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKT 559
K LIK+VVN+++K RK YMAA+FEPSKE++GG WY GTLD I +K + I
Sbjct: 66 KNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLK 125
Query: 560 VATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCY 739
VAT + + S F+ T Q EI+R L+LDK++ EVKSTGMG F S P GKVCY
Sbjct: 126 VATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVCY 185
Query: 740 RISSTGG--EATKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
+ +S GG K G +SIPCGVCPRIS+CTPDGIISP TC+Y+ KWL
Sbjct: 186 KSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWL 234
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 221 bits (564), Expect = 4e-55
Identities = 114/232 (49%), Positives = 153/232 (65%), Gaps = 3/232 (1%)
Frame = +2
Query: 194 SRKVLPEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMH-NLAGNMVDKVLKS 370
S++ PE A + LT E+ Y+++RS+ MGI++ D+K+E+ NL N+V K +KS
Sbjct: 2 SKRKRPESNAPSDS--LTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKS 59
Query: 371 LQAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIK 550
LQ K LIK+VVNI +K +K MA +FEPSKEISGG WY G+LDT I +K+ C I
Sbjct: 60 LQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQII 119
Query: 551 NKTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGK 730
VAT + + S AF++++T Q EI+RAL+LD +I EVKS G G F ++P GK
Sbjct: 120 KLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGK 179
Query: 731 VCYRISSTGGEA--TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
VCY+ S GG K G +SIPCGVCP+I+ CTPDG+ISP TC+YY WL
Sbjct: 180 VCYKNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWL 231
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 221 bits (563), Expect = 5e-55
Identities = 112/217 (51%), Positives = 146/217 (67%), Gaps = 3/217 (1%)
Frame = +2
Query: 239 PLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVVNIRNK 418
PL E+ Y+L+RS+ MGI++ D+K+E NL N+V K LK+LQ K LIK+VVNI++K
Sbjct: 83 PLLDAERVLYDLIRSKEDMGIWTRDMKRET-NLPDNVVTKSLKALQVKKLIKEVVNIQSK 141
Query: 419 NRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVCSYLNA 598
RK YMA +FEPSKE++GG WY G LDT I +K C + VATA + +N
Sbjct: 142 GRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINK 201
Query: 599 SNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGEATKG- 775
+ E + Q AEI+RAL+LD +I EV+S+G G F+S+P G VCYR ++ GG G
Sbjct: 202 TGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGP 261
Query: 776 --GIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
G +SIPCGVCPRI++CTPDGIISP TC YY KWL
Sbjct: 262 TIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 298
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 221 bits (563), Expect = 5e-55
Identities = 112/217 (51%), Positives = 146/217 (67%), Gaps = 3/217 (1%)
Frame = +2
Query: 239 PLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVVNIRNK 418
PL E+ Y+L+RS+ MGI++ D+K+E NL N+V K LK+LQ K LIK+VVNI++K
Sbjct: 22 PLLDAERVLYDLIRSKEDMGIWTRDMKRET-NLPDNVVTKSLKALQVKKLIKEVVNIQSK 80
Query: 419 NRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVCSYLNA 598
RK YMA +FEPSKE++GG WY G LDT I +K C + VATA + +N
Sbjct: 81 GRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKVATAEGISESINK 140
Query: 599 SNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGEATKG- 775
+ E + Q AEI+RAL+LD +I EV+S+G G F+S+P G VCYR ++ GG G
Sbjct: 141 TGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGP 200
Query: 776 --GIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
G +SIPCGVCPRI++CTPDGIISP TC YY KWL
Sbjct: 201 TIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 221 bits (563), Expect = 5e-55
Identities = 112/217 (51%), Positives = 146/217 (67%), Gaps = 3/217 (1%)
Frame = +2
Query: 239 PLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVVNIRNK 418
PL E+ Y+L+RS+ MGI++ D+K+E NL N+V K LK+LQ K LIK+VVNI++K
Sbjct: 22 PLLDAERVLYDLIRSKEDMGIWTRDMKRET-NLPDNVVTKSLKALQVKKLIKEVVNIQSK 80
Query: 419 NRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVCSYLNA 598
RK YMA +FEPSKE++GG WY G LDT I +K C + VATA + +N
Sbjct: 81 GRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINK 140
Query: 599 SNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGEATKG- 775
+ E + Q AEI+RAL+LD +I EV+S+G G F+S+P G VCYR ++ GG G
Sbjct: 141 TGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGP 200
Query: 776 --GIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
G +SIPCGVCPRI++CTPDGIISP TC YY KWL
Sbjct: 201 TIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 220 bits (561), Expect = 8e-55
Identities = 113/232 (48%), Positives = 153/232 (65%), Gaps = 3/232 (1%)
Frame = +2
Query: 194 SRKVLPEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMH-NLAGNMVDKVLKS 370
S++ P+ A + LT E+ Y+++RS+ MGI++ D+K+E+ NL N+V K +KS
Sbjct: 2 SKRKRPDSNAPSDS--LTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKS 59
Query: 371 LQAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIK 550
LQ K LIK+VVNI +K +K MA +FEPSKEISGG WY G+LDT I +K+ C I
Sbjct: 60 LQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQII 119
Query: 551 NKTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGK 730
VAT + + S AF++++T Q EI+RAL+LD +I EVKS G G F ++P GK
Sbjct: 120 KLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGK 179
Query: 731 VCYRISSTGGEA--TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
VCY+ S GG K G +SIPCGVCP+I+ C PDG+ISP TC+YY KWL
Sbjct: 180 VCYKNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWL 231
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 219 bits (559), Expect = 1e-54
Identities = 114/227 (50%), Positives = 150/227 (66%), Gaps = 3/227 (1%)
Frame = +2
Query: 209 PEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGL 388
P+ A Q PL E+ Y+L+RS+ MGI++ D+K+E NL N+V K LK+LQ K L
Sbjct: 14 PDTNAASQ--PLLDAERVLYDLIRSKEDMGIWTRDMKRET-NLPDNVVTKSLKALQVKKL 70
Query: 389 IKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVAT 568
IK+VVNI++K RK YMA +FEPSKE++GG WY G LDT I +K C + VAT
Sbjct: 71 IKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLKVAT 130
Query: 569 ATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRIS 748
A + +N + E + Q AEI+RAL+LD +I EV+S+G G F+S+P G VCYR +
Sbjct: 131 AEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCT 190
Query: 749 STGGEATKG---GIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
+ GG G G +SIPCGVCPRI++CTPDGIISP +C YY KWL
Sbjct: 191 NKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWL 237
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 219 bits (559), Expect = 1e-54
Identities = 115/232 (49%), Positives = 151/232 (65%), Gaps = 5/232 (2%)
Frame = +2
Query: 200 KVLPEKQARHQTPPLTVPEQQA--YELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSL 373
+ L KQ +P ++ E + Y ++ S+ MGI++ D+K+E NL N+V+K LK L
Sbjct: 5 QALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRET-NLPDNVVNKSLKVL 63
Query: 374 QAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKN 553
QAK LIK+VVNI+NK RK YMA +FEPSKEI+GG WY G LDT I +K C+ +
Sbjct: 64 QAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLK 123
Query: 554 KTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKV 733
VAT + + S F E+T Q EI++AL+LD + EVKS GM F+ +P GKV
Sbjct: 124 LKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKV 183
Query: 734 CYRI---SSTGGEATKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
CY+ ST GE + G +SIPCGVCPRIS+CTPDGIISP TC+YY+KWL
Sbjct: 184 CYKCVGKGSTAGE-PRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWL 234
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 217 bits (553), Expect = 7e-54
Identities = 113/233 (48%), Positives = 154/233 (66%), Gaps = 4/233 (1%)
Frame = +2
Query: 194 SRKVLPEKQARHQTPPLTVPEQQAYELVRS-RGSMGIFSSDVKKEMH-NLAGNMVDKVLK 367
S++ P+ A + LT E+ Y+++RS + MGI++ D+K+E+ NL N+V K +K
Sbjct: 2 SKRKRPDSNAPSDS--LTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIK 59
Query: 368 SLQAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYI 547
SLQ K LIK+VVNI NK +K MA +FEPSKEISGG WY G+LDT I +K+ C I
Sbjct: 60 SLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQI 119
Query: 548 KNKTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAG 727
VAT + + S AF++++T Q EI+RA++LD +I EVKS G G F ++P G
Sbjct: 120 IKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVG 179
Query: 728 KVCYRISSTGGEA--TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
KVCY+ S GG K G +S+PCGVCP+I+ CTPDG+ISP TC+YY KWL
Sbjct: 180 KVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 232
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 217 bits (553), Expect = 7e-54
Identities = 113/233 (48%), Positives = 154/233 (66%), Gaps = 4/233 (1%)
Frame = +2
Query: 194 SRKVLPEKQARHQTPPLTVPEQQAYELVRS-RGSMGIFSSDVKKEMH-NLAGNMVDKVLK 367
S++ P+ A + LT E+ Y+++RS + MGI++ D+K+E+ NL N+V K +K
Sbjct: 20 SKRKRPDSNAPSDS--LTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIK 77
Query: 368 SLQAKGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYI 547
SLQ K LIK+VVNI NK +K MA +FEPSKEISGG WY G+LDT I +K+ C I
Sbjct: 78 SLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQI 137
Query: 548 KNKTVATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAG 727
VAT + + S AF++++T Q EI+RA++LD +I EVKS G G F ++P G
Sbjct: 138 IKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVG 197
Query: 728 KVCYRISSTGGEA--TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
KVCY+ S GG K G +S+PCGVCP+I+ CTPDG+ISP TC+YY KWL
Sbjct: 198 KVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 250
>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 213 bits (542), Expect = 1e-52
Identities = 111/227 (48%), Positives = 150/227 (66%), Gaps = 2/227 (0%)
Frame = +2
Query: 206 LPEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKG 385
L K+ + LT E+ +++++ + MGI D+K+E+ NL N+V K LKSL AK
Sbjct: 10 LKRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREI-NLPDNLVTKCLKSLLAKN 68
Query: 386 LIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVA 565
LIK+V NI+N+ RK +++A+FEPS EI+GG WY G+LDT I+ +K C I VA
Sbjct: 69 LIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLKVA 128
Query: 566 TATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYR- 742
T V + SN Q+E++ Q EI++AL+LD ++ EVKS+G G FAS+P GKVCY+
Sbjct: 129 TLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCYKC 188
Query: 743 ISSTG-GEATKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
I G G K G +SIPCGVCP+IS CTPDGIISP TC+YY KWL
Sbjct: 189 IGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWL 235
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 208 bits (530), Expect = 3e-51
Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 3/223 (1%)
Frame = +2
Query: 209 PEKQARHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGL 388
P+ A Q PL E+ Y+L+RS+ MGI++ D+K+E NL N+V K LK+LQ K L
Sbjct: 104 PDTNAASQ--PLLDAERVLYDLIRSKEDMGIWTRDMKRET-NLPDNVVTKSLKALQVKKL 160
Query: 389 IKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVAT 568
IK+VVNI++K RK YMA +FEPSKE++GG WY G LDT I +K C + VAT
Sbjct: 161 IKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLKVAT 220
Query: 569 ATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRIS 748
A + +N + E + Q AEI+RAL+LD +I EV+S+G G F+S+P G VCYR +
Sbjct: 221 AEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCT 280
Query: 749 STGGEATKG---GIFSSIPCGVCPRISECTPDGIISPSTCIYY 868
+ GG G G +SIPCGVCPRI++CTPDGIISP + ++Y
Sbjct: 281 NKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 208 bits (529), Expect = 4e-51
Identities = 106/228 (46%), Positives = 149/228 (65%), Gaps = 3/228 (1%)
Frame = +2
Query: 206 LPEKQARHQTP--PLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQA 379
L KQ ++P LT E+ Y ++RS+ MGI+ D+K+ + + N+ +K LKSL+
Sbjct: 10 LKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKR-VAKVPDNVANKALKSLET 68
Query: 380 KGLIKDVVNIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKT 559
K LIK+VVNI+ + +K Y+AA+FEP+ EI+GG WY G +D +I+ +K C +I +
Sbjct: 69 KKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQCLKWIYKQR 128
Query: 560 VATATEVCSYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCY 739
VAT + + S +E+T E++RAL+LD ++ EVKS GMG F S+P GKVCY
Sbjct: 129 VATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDSIPVGKVCY 188
Query: 740 RISSTGGEA-TKGGIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
+ +S G K G SSIPCGVCPRIS+CTPDGIISP TC YY++WL
Sbjct: 189 KSTSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWL 236
>gb|AFK40562.1| unknown [Lotus japonicus]
Length = 232
Score = 205 bits (521), Expect = 4e-50
Identities = 103/221 (46%), Positives = 140/221 (63%), Gaps = 2/221 (0%)
Frame = +2
Query: 224 RHQTPPLTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVV 403
+ + P LT E Y+L+ S+ +MGI+ +D+K+E + NMV K +KSLQ K L+K+VV
Sbjct: 11 KRKRPDLTDGEDVVYKLIHSKENMGIWIADIKRET-KMPDNMVKKCIKSLQDKNLVKEVV 69
Query: 404 NIRNKNRKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVC 583
NI+++ +K YMA DFEPSKE++GG WY G DT I+ K Y+ + VAT V
Sbjct: 70 NIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVFLKYVFKQKVATCDGVL 129
Query: 584 SYLNASNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGE 763
+ + F +++T Q EI+RAL+LD +I EV+STG FASVP GK+CY+
Sbjct: 130 EWTRKNAVFSVDVTAQQVEEILRALVLDDEIIEVESTGKEEFASVPKGKICYKSKGGVRG 189
Query: 764 ATKGGIFSSIPCGVCPRISECTP--DGIISPSTCIYYNKWL 880
K G +SIPCGVCPRI +C P DG ISP TC Y+ KWL
Sbjct: 190 EKKAGAMASIPCGVCPRIIKCAPDADGFISPRTCDYFEKWL 230
>gb|ESW07407.1| hypothetical protein PHAVU_010G127200g [Phaseolus vulgaris]
Length = 236
Score = 202 bits (514), Expect = 2e-49
Identities = 97/215 (45%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Frame = +2
Query: 242 LTVPEQQAYELVRSRGSMGIFSSDVKKEMHNLAGNMVDKVLKSLQAKGLIKDVVNIRNKN 421
+T E+ Y ++R + MGI+ D+K+E N+ +M+ K +K L +K LIK+VVNI+NK+
Sbjct: 21 MTNEERAVYNIIRGKKEMGIWQGDIKRET-NIPDSMLKKSVKLLISKTLIKEVVNIQNKS 79
Query: 422 RKCYMAADFEPSKEISGGTWYDRGTLDTGLIHGIKTACSAYIKNKTVATATEVCSYLNA- 598
+K MA +FEPSKEI+GG WY G LDT LI + C I K VAT + +
Sbjct: 80 KKVLMAMEFEPSKEITGGEWYTEGRLDTQLIDALSDVCLKLISRKKVATRDAILEWTRTL 139
Query: 599 -SNAFQMEITLQHTAEIIRALILDKKIEEVKSTGMGSFASVPAGKVCYRISSTGGEATKG 775
S F ++ +I++ L+++ K++EV STG G F++VPAG+VC+R++ G K
Sbjct: 140 GSEVFPGGVSSGQVEQILKVLVMENKVQEVNSTGFGEFSTVPAGEVCFRLAKKVGTNVKA 199
Query: 776 GIFSSIPCGVCPRISECTPDGIISPSTCIYYNKWL 880
G +SIPCGVCPRI CTP+G+ISP+TC YY KWL
Sbjct: 200 GAMASIPCGVCPRIKFCTPNGVISPTTCQYYQKWL 234