BLASTX nr result

ID: Stemona21_contig00006985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00006985
         (311 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006655872.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...    60   7e-08
ref|NP_001057040.1| Os06g0193000 [Oryza sativa Japonica Group] g...    56   8e-07
dbj|BAG88248.1| unnamed protein product [Oryza sativa Japonica G...    56   8e-07
ref|XP_003564160.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...    54   1e-06
ref|XP_004964602.1| PREDICTED: probable ubiquitin-conjugating en...    50   4e-06

>ref|XP_006655872.1| PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Oryza
           brachyantha]
          Length = 240

 Score = 59.7 bits (143), Expect(2) = 7e-08
 Identities = 28/56 (50%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = -1

Query: 221 SLAYNCVSKNRPNFKKVFPDYVDKYYKLKV*EKSISE-QQEENRCPPPATSRERLA 57
           SLAYNC SKN P+FKK+FP+YV+KY + K  E++++E + +EN  P P+ + ++LA
Sbjct: 139 SLAYNCESKNCPHFKKMFPEYVEKYNQQKQMEQTVAEPETQENPAPAPSPAVQQLA 194



 Score = 22.3 bits (46), Expect(2) = 7e-08
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 309 ETWIPIWSVSS 277
           E+W P+WSV+S
Sbjct: 96  ESWNPMWSVAS 106


>ref|NP_001057040.1| Os06g0193000 [Oryza sativa Japonica Group]
           gi|51090793|dbj|BAD35271.1| putative ubiquitin
           conjugating enzyme [Oryza sativa Japonica Group]
           gi|113595080|dbj|BAF18954.1| Os06g0193000 [Oryza sativa
           Japonica Group] gi|125554386|gb|EAY99991.1| hypothetical
           protein OsI_21994 [Oryza sativa Indica Group]
           gi|125596336|gb|EAZ36116.1| hypothetical protein
           OsJ_20427 [Oryza sativa Japonica Group]
           gi|215694359|dbj|BAG89352.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 240

 Score = 56.2 bits (134), Expect(2) = 8e-07
 Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = -1

Query: 221 SLAYNCVSKNRPNFKKVFPDYVDKYYKLKV*EKSISE-QQEENRCPPPATSRERLA 57
           SLAYNC SKN P+F+K+FP+YV+KY + K  E++++E + +EN  P P+ + ++ A
Sbjct: 139 SLAYNCESKNCPHFRKMFPEYVEKYNQQKQMEQTVAEPETQENPAPAPSPAVQQQA 194



 Score = 22.3 bits (46), Expect(2) = 8e-07
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 309 ETWIPIWSVSS 277
           E+W P+WSV+S
Sbjct: 96  ESWNPMWSVAS 106


>dbj|BAG88248.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 168

 Score = 56.2 bits (134), Expect(2) = 8e-07
 Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = -1

Query: 221 SLAYNCVSKNRPNFKKVFPDYVDKYYKLKV*EKSISE-QQEENRCPPPATSRERLA 57
           SLAYNC SKN P+F+K+FP+YV+KY + K  E++++E + +EN  P P+ + ++ A
Sbjct: 67  SLAYNCESKNCPHFRKMFPEYVEKYNQQKQMEQTVAEPETQENPAPAPSPAVQQQA 122



 Score = 22.3 bits (46), Expect(2) = 8e-07
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 309 ETWIPIWSVSS 277
           E+W P+WSV+S
Sbjct: 24  ESWNPMWSVAS 34


>ref|XP_003564160.1| PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Brachypodium
           distachyon]
          Length = 240

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 24/49 (48%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = -1

Query: 221 SLAYNCVSKNRPNFKKVFPDYVDKYYKLKV*EKSISE-QQEENRCPPPA 78
           SLAYNC SKN P+F+K+FP+YV+KY + +  E++++E + +EN  P P+
Sbjct: 139 SLAYNCESKNCPHFRKLFPEYVEKYNQQQEMEQTVAEPEPQENTAPAPS 187



 Score = 23.5 bits (49), Expect(2) = 1e-06
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 14/53 (26%)
 Frame = -3

Query: 309 ETWIPIWSVSS---------NDD-----SCNLQDAEKCKLVRAFSRIQLCEQK 193
           E+W P+WSV+S          DD     S    D EK +L +A S    CE K
Sbjct: 96  ESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKRRLAKA-SLAYNCESK 147


>ref|XP_004964602.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 33-like
           [Setaria italica]
          Length = 240

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 23/50 (46%), Positives = 33/50 (66%)
 Frame = -1

Query: 221 SLAYNCVSKNRPNFKKVFPDYVDKYYKLKV*EKSISEQQEENRCPPPATS 72
           SLAYNC SKN P+F+K+FP+YV+KY + +  E + +E +       PA S
Sbjct: 139 SLAYNCESKNCPHFRKLFPEYVEKYNQQQQLENTAAESEPRENPAAPAPS 188



 Score = 25.8 bits (55), Expect(2) = 4e-06
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 14/53 (26%)
 Frame = -3

Query: 309 ETWIPIWSVSS---------NDD-----SCNLQDAEKCKLVRAFSRIQLCEQK 193
           E+W P+WSV+S          DD     S    DAEK +L +A S    CE K
Sbjct: 96  ESWNPMWSVASILTGLLSFMMDDALTTGSIKTSDAEKRRLAKA-SLAYNCESK 147


Top