BLASTX nr result
ID: Stemona21_contig00006958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00006958
(1037 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei... 372 e-100
gb|ACJ84781.1| unknown [Medicago truncatula] 370 e-100
emb|CBI36876.3| unnamed protein product [Vitis vinifera] 367 5e-99
ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutr... 364 3e-98
ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotei... 364 3e-98
gb|AFK36658.1| unknown [Medicago truncatula] 364 4e-98
ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotei... 362 1e-97
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei... 362 1e-97
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu... 362 1e-97
ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarp... 360 5e-97
ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, p... 358 2e-96
gb|ADE76200.1| unknown [Picea sitchensis] gi|294464400|gb|ADE777... 358 3e-96
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei... 357 4e-96
ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotei... 357 6e-96
gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus... 356 7e-96
ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Caps... 356 7e-96
ref|XP_006654062.1| PREDICTED: U1 small nuclear ribonucleoprotei... 356 1e-95
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei... 355 1e-95
ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]... 355 1e-95
gb|ACU24174.1| unknown [Glycine max] 355 2e-95
>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 372 bits (956), Expect = e-100
Identities = 186/237 (78%), Positives = 202/237 (85%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
+ PNMTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWV+FE+V+SA
Sbjct: 10 ISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSA 69
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
T AL++MQGFPFYDKPMRIQYAKTKSD+IAKADGTFVPRERR+RHD++A +KRREQ HD
Sbjct: 70 TNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQ-HDA 128
Query: 555 NQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
NQ APPLSQ+PY GG K VPEAPAPPNNILFI+NLPHE TPMMLQ
Sbjct: 129 NQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQ 188
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
M FCQY GFKEVRM+EAKPGIAFVEY DEMQST AM GLQ KI QNPMLITYAKK
Sbjct: 189 MFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245
>gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 370 bits (950), Expect = e-100
Identities = 185/239 (77%), Positives = 203/239 (84%), Gaps = 4/239 (1%)
Frame = -3
Query: 921 PTVPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVA 742
P P NMTIYINNLNEKIK+DELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDV
Sbjct: 8 PEPPQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVT 67
Query: 741 SATEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHH 562
SA+ AL++MQGFPFYDKPMRIQYA+TKSD+IAKA+GTFVPRE+RKRHD+KA KKR++Q +
Sbjct: 68 SASNALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQ-N 126
Query: 561 DVN----QXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMM 394
D N P LSQ+PYPGG K ++PEAPAPPNNILFI+NLP+ETTPMM
Sbjct: 127 DANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMM 186
Query: 393 LQMLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
LQMLF QY GFKEVRM+EAKPGIAFVEY DEMQST AM LQ FKI PQNPMLITYAKK
Sbjct: 187 LQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245
>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 367 bits (941), Expect = 5e-99
Identities = 184/233 (78%), Positives = 199/233 (85%), Gaps = 4/233 (1%)
Frame = -3
Query: 903 MTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASATEAL 724
MTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWV+FE+V+SAT AL
Sbjct: 1 MTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNAL 60
Query: 723 KRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDVNQ-- 550
++MQGFPFYDKPMRIQYAKTKSD+IAKADGTFVPRERR+RHD++A +KRREQ HD NQ
Sbjct: 61 RQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQ-HDANQAG 119
Query: 549 --XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQMLFC 376
APPLSQ+PY GG K VPEAPAPPNNILFI+NLPHE TPMMLQM FC
Sbjct: 120 VGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFC 179
Query: 375 QYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
QY GFKEVRM+EAKPGIAFVEY DEMQST AM GLQ KI QNPMLITYAKK
Sbjct: 180 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232
>ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutrema salsugineum]
gi|557099025|gb|ESQ39405.1| hypothetical protein
EUTSA_v10001603mg [Eutrema salsugineum]
Length = 247
Score = 364 bits (935), Expect = 3e-98
Identities = 179/237 (75%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
V PN TIYINNLNEK+KLDELKKSL+AVFSQFGKILEVLAFKTLKHKGQAWV+FE SA
Sbjct: 12 VSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFESAESA 71
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
+ A+ +M GFPFYDKPMRIQ+AKTKSD++AKADGTFVPRE+RKRH+EK KK++EQHHD
Sbjct: 72 STAIAKMNGFPFYDKPMRIQFAKTKSDVVAKADGTFVPREKRKRHEEKGGKKKKEQHHDS 131
Query: 555 ----NQXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
N APPLSQ+PYPGG KP++PEAPAPPNNILF++NLPH+TTPM +Q
Sbjct: 132 TQMGNAMNSAYPGVYGAAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHDTTPMTVQ 191
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
MLF QY GFKEVRM+EAKPGIAFVE+ADEMQST AM GLQ FKI QNPMLITYAKK
Sbjct: 192 MLFYQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFKIL-QNPMLITYAKK 247
>ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 244
Score = 364 bits (935), Expect = 3e-98
Identities = 180/237 (75%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
VP N TIYINNLNEKIKLDELKK+LHA+FSQFGK+L+VLAFKTLKHKGQAWV+FEDV+SA
Sbjct: 10 VPANQTIYINNLNEKIKLDELKKTLHAMFSQFGKVLDVLAFKTLKHKGQAWVVFEDVSSA 69
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
T A+++MQ FPFYDKPM+IQYAKTKSDIIAKADGTFVPRERRKRH+EK K++ +Q D
Sbjct: 70 TNAIRQMQSFPFYDKPMKIQYAKTKSDIIAKADGTFVPRERRKRHEEKGRKRKEQQ--DA 127
Query: 555 NQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
NQ APPLSQ+PYPGG K MVPEAPAPPNNILF++NLPHE T MLQ
Sbjct: 128 NQAGMVLNPAYPGAYGGAPPLSQIPYPGGVKSMVPEAPAPPNNILFVQNLPHEATSAMLQ 187
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
MLFCQY GFKEVRM+EAKPGIAFVEY +EMQST AM LQ+FK+TPQN MLITYAKK
Sbjct: 188 MLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTMAMQNLQAFKVTPQNSMLITYAKK 244
>gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 364 bits (934), Expect = 4e-98
Identities = 182/233 (78%), Positives = 200/233 (85%), Gaps = 4/233 (1%)
Frame = -3
Query: 903 MTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASATEAL 724
MTIYINNLNEKIK+DELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDV SA+ AL
Sbjct: 1 MTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNAL 60
Query: 723 KRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDVN--- 553
++MQGFPFYDKPMRIQYA+TKSD+IAKA+GTFVPRE+RKRHD+KA KKR++Q +D N
Sbjct: 61 RQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKDQ-NDANLAG 119
Query: 552 -QXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQMLFC 376
P LSQ+PYPGG K ++PEAPAPPNNILFI+NLP+ETTPMMLQMLF
Sbjct: 120 TGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFL 179
Query: 375 QYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
QY GFKEVRM+EAKPGIAFVEY DEMQST AM LQ FKI PQNPMLITYAKK
Sbjct: 180 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232
>ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 241
Score = 362 bits (930), Expect = 1e-97
Identities = 181/232 (78%), Positives = 196/232 (84%)
Frame = -3
Query: 912 PPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASAT 733
P NMTIYINNLNEKIK++ELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SA+
Sbjct: 11 PQNMTIYINNLNEKIKIEELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSAS 70
Query: 732 EALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDVN 553
AL++MQGFPFYDKPMRIQYA+TKSDIIAKADGTFVPRE+RKRHD+K KKR++QH
Sbjct: 71 NALRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPREKRKRHDDKG-KKRKDQHDANL 129
Query: 552 QXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQMLFCQ 373
+PYPGG K MVPEAPAPPNNILFI+NLP+ETTPMMLQMLF Q
Sbjct: 130 AGMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQ 189
Query: 372 YAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
Y GFKEVRM+E KPGIAFVEY DEMQST AM LQ FKITPQNPMLITYAKK
Sbjct: 190 YPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 241
>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 253
Score = 362 bits (929), Expect = 1e-97
Identities = 177/237 (74%), Positives = 202/237 (85%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
VPPN+TIYINNLNEKIKL+ELKKS+HAVFSQFGKILEVLAFKTLKHKGQAWV+F++V+SA
Sbjct: 19 VPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSA 78
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
+ AL++MQGFPFYDKPMRIQYAKTKSD++AKADGTFVPRE+RKRH++K KK+ +Q D
Sbjct: 79 SNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQ--DA 136
Query: 555 NQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
NQ APP SQ+PY GG K VPEAPAPPN+ILF++NLPH++TPMMLQ
Sbjct: 137 NQAGMGRNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQ 196
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
MLFCQY GFKEVRM+EAKPGIAF+EY DEMQST AM LQ FKIT NPMLITYAKK
Sbjct: 197 MLFCQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK 253
>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
[Solanum tuberosum]
Length = 253
Score = 362 bits (929), Expect = 1e-97
Identities = 178/236 (75%), Positives = 202/236 (85%), Gaps = 4/236 (1%)
Frame = -3
Query: 912 PPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASAT 733
PPN+TIYINNLNEKIKL+ELKKS+HAVFSQFGKILEVLAFKTLKHKGQAWV+FE+V+SA+
Sbjct: 20 PPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSAS 79
Query: 732 EALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDVN 553
AL++MQGFPFYDKPMRIQYAKTKSD++AKADGTFVPRE+RKRH++K KK+ +Q D N
Sbjct: 80 NALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKDQQ--DSN 137
Query: 552 Q----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQM 385
Q APP SQ+PY GG K VPEAPAPPN+ILF++NLPH++TPMMLQM
Sbjct: 138 QAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQM 197
Query: 384 LFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
LFCQY GFKEVRMIEAKPGIAF+EY DEMQST AM LQ FKIT +NPMLITYAKK
Sbjct: 198 LFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253
>ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarpa]
gi|118485733|gb|ABK94716.1| unknown [Populus
trichocarpa] gi|550324046|gb|EEE98652.2| SPLICEOSOMAL
protein U1A [Populus trichocarpa]
Length = 254
Score = 360 bits (924), Expect = 5e-97
Identities = 182/237 (76%), Positives = 196/237 (82%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
V NMTIYINNLNEKIK+DELK SLHAVFSQFGKILE+LAFKTLKHKGQAWVIFEDV SA
Sbjct: 20 VSQNMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDVQSA 79
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
+ A+++MQ FPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+R+RH+EK KK+ HD
Sbjct: 80 SNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKK--DQHDA 137
Query: 555 NQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
NQ P L Q+PYPGG K MVPEAPAPPNNILFI+NLP+ETTPMMLQ
Sbjct: 138 NQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMMLQ 197
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
MLF QY GFKEVRM+EAKPGIAFVEY DEMQST AMHGLQ FKI QN MLITYAKK
Sbjct: 198 MLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254
>ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis] gi|223537662|gb|EEF39285.1| small nuclear
ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
Length = 254
Score = 358 bits (919), Expect = 2e-96
Identities = 179/237 (75%), Positives = 200/237 (84%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
+ PNMTIYINNLNEKIKLDELKKSLHAVFSQFGKI+E+LAFKTLKHKGQAWV+FEDV SA
Sbjct: 21 ISPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKIIEILAFKTLKHKGQAWVVFEDVQSA 80
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
T A+++MQ FPFYDKPMRI +AKTKSD+IAKADGTFVPRE+RKRH+EK KR+++ HD
Sbjct: 81 TNAIRQMQSFPFYDKPMRIHFAKTKSDVIAKADGTFVPREKRKRHEEKG--KRKKEQHDA 138
Query: 555 NQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
NQ PPLSQ+PYPGG K MVPEAPAPPNNILFI+NLP++TT M+LQ
Sbjct: 139 NQAGIGMAPAYAGAYGATPPLSQIPYPGGAKSMVPEAPAPPNNILFIQNLPNDTTTMVLQ 198
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
MLF YAGFKEVRM+E+KPGIAFVEYADEMQST AM GLQ KI QNPMLITYAKK
Sbjct: 199 MLFQHYAGFKEVRMVESKPGIAFVEYADEMQSTVAMQGLQGLKI-QQNPMLITYAKK 254
>gb|ADE76200.1| unknown [Picea sitchensis] gi|294464400|gb|ADE77712.1| unknown
[Picea sitchensis]
Length = 241
Score = 358 bits (918), Expect = 3e-96
Identities = 175/241 (72%), Positives = 204/241 (84%), Gaps = 4/241 (1%)
Frame = -3
Query: 927 EAPTVPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFED 748
++ +PPNMTIYINNLNEK KLDELKKSL+AVFSQFGKI++V+A KTLKH+GQAWV+F++
Sbjct: 2 QSSDIPPNMTIYINNLNEKTKLDELKKSLYAVFSQFGKIVDVIALKTLKHRGQAWVVFDE 61
Query: 747 VASATEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQ 568
V++AT AL++MQGFPFYDKPMRIQYAKTKSD IAKADGT+VPRE+R+R DE+A++KRREQ
Sbjct: 62 VSAATNALRQMQGFPFYDKPMRIQYAKTKSDAIAKADGTYVPREKRRRQDERAERKRREQ 121
Query: 567 HHDVNQ--XXXXXXXXXXXAPPL--SQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTP 400
HH+ Q P+ SQ+ +P +P +PEAPAPPNNILF++NLPHETT
Sbjct: 122 HHETQQPGVIPNAAYPSGYGAPILGSQMQFPSS-RPSLPEAPAPPNNILFVQNLPHETTS 180
Query: 399 MMLQMLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAK 220
MMLQMLFCQY GFKEVRMIEAKPGIAFVEYADEMQST AM LQ FKITPQNPMLITYAK
Sbjct: 181 MMLQMLFCQYHGFKEVRMIEAKPGIAFVEYADEMQSTVAMQALQGFKITPQNPMLITYAK 240
Query: 219 K 217
K
Sbjct: 241 K 241
>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 357 bits (916), Expect = 4e-96
Identities = 178/235 (75%), Positives = 196/235 (83%)
Frame = -3
Query: 921 PTVPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVA 742
P +P N TIYINNLNEKIK+DELKKSL+AVF+QFGKILEVLAFKTLKHKGQAWV+FED +
Sbjct: 8 PEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDAS 67
Query: 741 SATEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHH 562
SA+ AL++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHDEKA KKR++QH
Sbjct: 68 SASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA-KKRKDQHD 126
Query: 561 DVNQXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQML 382
+ YPGG K MVPEAPAPPNNILFI+NLP+++TPMMLQML
Sbjct: 127 SNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQML 186
Query: 381 FCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
F QY GFKEVRM+E KPGIAFVEY DEMQST AM LQ FKITPQNPMLITYAKK
Sbjct: 187 FLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
>ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Brachypodium
distachyon]
Length = 251
Score = 357 bits (915), Expect = 6e-96
Identities = 188/252 (74%), Positives = 206/252 (81%), Gaps = 3/252 (1%)
Frame = -3
Query: 963 MSSXXXXXXXGAEAPTVPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTL 784
MS G EA V PN+TIYINNLNEK KL+ELKKSL+AVFSQFGKILEVLAFKTL
Sbjct: 1 MSGEAAVGGGGGEANGVQPNVTIYINNLNEKTKLEELKKSLNAVFSQFGKILEVLAFKTL 60
Query: 783 KHKGQAWVIFEDVASATEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKR 604
KHKGQAWV+FEDVASATEALKRMQ FPFYDKPM+IQYAKTKSD++AKADGTFVPRERRKR
Sbjct: 61 KHKGQAWVVFEDVASATEALKRMQDFPFYDKPMKIQYAKTKSDVVAKADGTFVPRERRKR 120
Query: 603 HDEKADKK-RREQHHDVNQ--XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNIL 433
DEK +KK +REQHHDV+Q APPLSQLP+ GG K M+PE PNNIL
Sbjct: 121 TDEKPEKKQKREQHHDVSQGTLGMNAYPGAYGAPPLSQLPFGGGPKVMMPEI-IVPNNIL 179
Query: 432 FIENLPHETTPMMLQMLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKIT 253
F++NLPH+TTPMMLQMLFCQY GFKE RMIEAKPGIAFVEY DE Q+TAAM LQ+FKI+
Sbjct: 180 FVQNLPHDTTPMMLQMLFCQYQGFKEARMIEAKPGIAFVEYGDEGQATAAMSALQNFKIS 239
Query: 252 PQNPMLITYAKK 217
N MLITYAKK
Sbjct: 240 KDNLMLITYAKK 251
>gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus vulgaris]
Length = 241
Score = 356 bits (914), Expect = 7e-96
Identities = 175/235 (74%), Positives = 197/235 (83%)
Frame = -3
Query: 921 PTVPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVA 742
P +P N TIYINN+NEKIK++ELKKSL+AVF+QFGKILEVLAFKTLKHKGQAWV+FEDV+
Sbjct: 8 PEIPQNNTIYINNINEKIKIEELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDVS 67
Query: 741 SATEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHH 562
SA+ AL++MQGFPFYDKPM+IQYAKTKSD+IAKADGTFVPRE+RKRHD+K KKR++QH
Sbjct: 68 SASNALRQMQGFPFYDKPMKIQYAKTKSDVIAKADGTFVPREKRKRHDDKG-KKRKDQHD 126
Query: 561 DVNQXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQML 382
+PYPGG K MVPEAPAPPNNILFI+NLP+E+TPMMLQML
Sbjct: 127 ANLAGMGLNPAYSGGYGATPTIPYPGGAKSMVPEAPAPPNNILFIQNLPNESTPMMLQML 186
Query: 381 FCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
F QY GFKEVRM+E KPGIAFVEY DEMQST AM LQ FKITPQNPMLITYAKK
Sbjct: 187 FLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQSLQGFKITPQNPMLITYAKK 241
>ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Capsella rubella]
gi|482563581|gb|EOA27771.1| hypothetical protein
CARUB_v10023926mg [Capsella rubella]
Length = 247
Score = 356 bits (914), Expect = 7e-96
Identities = 176/237 (74%), Positives = 199/237 (83%), Gaps = 4/237 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
V PN TIYINNLNEK+KLDELKKSL+AVFSQFGKILEVLAFKTLKHKGQAWV+F++ SA
Sbjct: 12 VSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDNADSA 71
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
+ A+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKR +EK KK+++QHHD
Sbjct: 72 STAIAKMNDFPFYDKRMRIQYAKTKSDVVAKADGTFVPREKRKRQEEKGGKKKKDQHHDS 131
Query: 555 NQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQ 388
Q APPLSQ+PYPGG KP++PEAPAPPNNILF++NLPHETTPM+LQ
Sbjct: 132 TQMGMAMNSAYPGVYGTAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHETTPMVLQ 191
Query: 387 MLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
MLFCQY GFKEVRM+EAKPGIAFVE+ADEMQST AM LQ FKI QN MLITYAKK
Sbjct: 192 MLFCQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQALQGFKI-QQNQMLITYAKK 247
>ref|XP_006654062.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oryza
brachyantha]
Length = 252
Score = 356 bits (913), Expect = 1e-95
Identities = 184/236 (77%), Positives = 202/236 (85%), Gaps = 3/236 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
VPPN+TIYINNLNEKIKL+ELKKSL AVFSQFGKIL+VLAFKTLKHKGQAWV+FEDVASA
Sbjct: 18 VPPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASA 77
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKK-RREQHHD 559
TEALK MQ FPF++KPMRIQYAKTKSDIIAKADGTFVPRERRKR+D+K +KK +REQHHD
Sbjct: 78 TEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDDKPEKKQKREQHHD 137
Query: 558 VNQ--XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQM 385
V+Q APPLSQLP+ G K M+PE PNNILF++NLPHETTPMMLQM
Sbjct: 138 VSQVGLGVNAYPGVYGAPPLSQLPFAGAQKVMMPEI-IVPNNILFVQNLPHETTPMMLQM 196
Query: 384 LFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
LFCQY GFKEVRM+EAKPGIAFVEY DE Q+TAAM+ LQ FKIT N MLITYAKK
Sbjct: 197 LFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNLLQGFKITKDNQMLITYAKK 252
>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 355 bits (912), Expect = 1e-95
Identities = 180/236 (76%), Positives = 201/236 (85%), Gaps = 3/236 (1%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
VPPNMTIYINNLNEKIKL+ELKKSL+AVFSQFGKILEVLAFKTLKHKGQAWV+FE+V+SA
Sbjct: 11 VPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSA 70
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHHDV 556
T AL++MQGFPFYDKPMRIQYAKTKSDIIAK+DG+FVPRE+RKRH+EK KK+ + HD
Sbjct: 71 TNALRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEEKGRKKK--EQHDA 128
Query: 555 NQ---XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQM 385
NQ A SQ+PY GG MVPEAPAPPN+ILF++NLPHETTPMMLQM
Sbjct: 129 NQAGMGLNPAFAGAYGATAHSQVPYSGGV--MVPEAPAPPNSILFVQNLPHETTPMMLQM 186
Query: 384 LFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
LFCQY GFKEVRM+EAKPGIAFVEY+DE+QST AM LQ FK+ PQN MLITYAKK
Sbjct: 187 LFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK 242
>ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1
small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A gi|1050430|emb|CAA90283.1| U1snRNP-specific
protein [Arabidopsis thaliana] gi|2529669|gb|AAC62852.1|
small nuclear ribonucleoprotein U1A [Arabidopsis
thaliana] gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|16649011|gb|AAL24357.1| small
nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear
ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|330255767|gb|AEC10861.1|
spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 355 bits (912), Expect = 1e-95
Identities = 177/238 (74%), Positives = 199/238 (83%), Gaps = 5/238 (2%)
Frame = -3
Query: 915 VPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVASA 736
V PN TIYINNLNEK+KLDELKKSL+AVFSQFGKILE+LAFKT KHKGQAWV+F++ SA
Sbjct: 14 VSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESA 73
Query: 735 TEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEK-ADKKRREQHHD 559
+ A+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKRH+EK KK+++QHHD
Sbjct: 74 STAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHD 133
Query: 558 VNQ----XXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMML 391
Q APPLSQ+PYPGG KP +PEAPAPPNNILF++NLPHETTPM+L
Sbjct: 134 STQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVL 193
Query: 390 QMLFCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
QMLFCQY GFKEVRMIEAKPGIAFVE+ADEMQST AM GLQ FKI QN MLITYAKK
Sbjct: 194 QMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKI-QQNQMLITYAKK 250
>gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 355 bits (911), Expect = 2e-95
Identities = 177/235 (75%), Positives = 195/235 (82%)
Frame = -3
Query: 921 PTVPPNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVA 742
P +P N IYINNLNEKIK+DELKKSL+AVF+QFGKILEVLAFKTLKHKGQAWV+FED +
Sbjct: 8 PEIPQNNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDAS 67
Query: 741 SATEALKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDEKADKKRREQHH 562
SA+ AL++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHDEKA KKR++QH
Sbjct: 68 SASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA-KKRKDQHD 126
Query: 561 DVNQXXXXXXXXXXXAPPLSQLPYPGGYKPMVPEAPAPPNNILFIENLPHETTPMMLQML 382
+ YPGG K MVPEAPAPPNNILFI+NLP+++TPMMLQML
Sbjct: 127 SNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQML 186
Query: 381 FCQYAGFKEVRMIEAKPGIAFVEYADEMQSTAAMHGLQSFKITPQNPMLITYAKK 217
F QY GFKEVRM+E KPGIAFVEY DEMQST AM LQ FKITPQNPMLITYAKK
Sbjct: 187 FLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241