BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00005838
         (740 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262798.2| PREDICTED: transcription initiation factor I...    99   1e-18
emb|CBI33123.3| unnamed protein product [Vitis vinifera]               99   1e-18
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]    99   1e-18
ref|XP_002322538.2| transcription initiation factor IIF alpha su...    96   2e-17
gb|EOY28872.1| Transcription activators,DNA binding,RNA polymera...    95   3e-17
gb|EOY28871.1| Transcription activators,DNA binding,RNA polymera...    95   3e-17
gb|EOY28870.1| Transcription activators,DNA binding,RNA polymera...    95   3e-17
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera...    95   3e-17
ref|XP_002489182.1| hypothetical protein SORBIDRAFT_0013s009090 ...    93   8e-17
ref|XP_004983299.1| PREDICTED: transcription initiation factor I...    93   1e-16
ref|XP_004983298.1| PREDICTED: transcription initiation factor I...    93   1e-16
gb|EMT20390.1| Transcription initiation factor IIF subunit alpha...    93   1e-16
gb|EMS62582.1| Transcription initiation factor IIF subunit alpha...    93   1e-16
gb|AFW68944.1| hypothetical protein ZEAMMB73_467667 [Zea mays]         93   1e-16
gb|AFW68943.1| hypothetical protein ZEAMMB73_467667 [Zea mays]         93   1e-16
gb|AFW68941.1| hypothetical protein ZEAMMB73_467667 [Zea mays]         93   1e-16
ref|XP_003573836.1| PREDICTED: transcription initiation factor I...    93   1e-16
gb|ACN31587.1| unknown [Zea mays]                                      93   1e-16
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...    93   1e-16
gb|ACL54486.1| unknown [Zea mays]                                      93   1e-16

>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = +3

Query: 225 GPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVK 404
           GPV+EDEIR+VLL   PVTTQ+LVA+FKARLK+QEDK AFADILRRISKIQKTNG +YV 
Sbjct: 471 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVV 530

Query: 405 LRE 413
           LR+
Sbjct: 531 LRD 533


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = +3

Query: 225 GPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVK 404
           GPV+EDEIR+VLL   PVTTQ+LVA+FKARLK+QEDK AFADILRRISKIQKTNG +YV 
Sbjct: 476 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVV 535

Query: 405 LRE 413
           LR+
Sbjct: 536 LRD 538


>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = +3

Query: 225 GPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVK 404
           GPV+EDEIR+VLL   PVTTQ+LVA+FKARLK+QEDK AFADILRRISKIQKTNG +YV 
Sbjct: 372 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVV 431

Query: 405 LRE 413
           LR+
Sbjct: 432 LRD 434


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
           [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
           transcription initiation factor IIF alpha subunit family
           protein [Populus trichocarpa]
          Length = 540

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 60/139 (43%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
 Frame = +3

Query: 3   SGSTRGTPATXXXXXXXXXXXXXXXXXXNGAXXXXXXXXXXXXXXXENPSS--AKAGVPX 176
           SGS +GTP+T                  NGA               +  SS   K     
Sbjct: 401 SGSAKGTPSTSKSAKGKRKLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATP 460

Query: 177 XXXXXXXXXXXXXXXNGPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADIL 356
                           GPV+E+EIR+VLL   PVTTQ+LVARFK+RL+T EDK AFADIL
Sbjct: 461 KVTPPSSKTGSTSGSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADIL 520

Query: 357 RRISKIQKTNGHSYVKLRE 413
           RRISKIQKT+G +YV LR+
Sbjct: 521 RRISKIQKTSGSNYVVLRD 539


>gb|EOY28872.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 4 [Theobroma cacao]
          Length = 480

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 147 PSSAKAGVPXXXXXXXXXXXXXXXXNGPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQ 326
           PSSAKAG                   GPV+E+EIR+VLL   PVTT +LVA+FKARLK+ 
Sbjct: 390 PSSAKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSP 449

Query: 327 EDKAAFADILRRISKIQKTNG-HSYVKLRE 413
           EDK AFADILRRISKIQKTNG ++YV LR+
Sbjct: 450 EDKKAFADILRRISKIQKTNGPNNYVVLRD 479


>gb|EOY28871.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 3 [Theobroma cacao]
          Length = 496

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 147 PSSAKAGVPXXXXXXXXXXXXXXXXNGPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQ 326
           PSSAKAG                   GPV+E+EIR+VLL   PVTT +LVA+FKARLK+ 
Sbjct: 406 PSSAKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSP 465

Query: 327 EDKAAFADILRRISKIQKTNG-HSYVKLRE 413
           EDK AFADILRRISKIQKTNG ++YV LR+
Sbjct: 466 EDKKAFADILRRISKIQKTNGPNNYVVLRD 495


>gb|EOY28870.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 2 [Theobroma cacao]
          Length = 473

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 147 PSSAKAGVPXXXXXXXXXXXXXXXXNGPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQ 326
           PSSAKAG                   GPV+E+EIR+VLL   PVTT +LVA+FKARLK+ 
Sbjct: 383 PSSAKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSP 442

Query: 327 EDKAAFADILRRISKIQKTNG-HSYVKLRE 413
           EDK AFADILRRISKIQKTNG ++YV LR+
Sbjct: 443 EDKKAFADILRRISKIQKTNGPNNYVVLRD 472


>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 1 [Theobroma cacao]
          Length = 549

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 147 PSSAKAGVPXXXXXXXXXXXXXXXXNGPVSEDEIRSVLLTMDPVTTQELVARFKARLKTQ 326
           PSSAKAG                   GPV+E+EIR+VLL   PVTT +LVA+FKARLK+ 
Sbjct: 459 PSSAKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSP 518

Query: 327 EDKAAFADILRRISKIQKTNG-HSYVKLRE 413
           EDK AFADILRRISKIQKTNG ++YV LR+
Sbjct: 519 EDKKAFADILRRISKIQKTNGPNNYVVLRD 548


>ref|XP_002489182.1| hypothetical protein SORBIDRAFT_0013s009090 [Sorghum bicolor]
           gi|241947132|gb|EES20277.1| hypothetical protein
           SORBIDRAFT_0013s009090 [Sorghum bicolor]
          Length = 328

 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 264 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGSEDKNAFAEILKKISKIQKTNGHNYVVL 323

Query: 408 RE 413
           R+
Sbjct: 324 RD 325


>ref|XP_004983299.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X2 [Setaria italica]
          Length = 530

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 466 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 525

Query: 408 RE 413
           R+
Sbjct: 526 RD 527


>ref|XP_004983298.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X1 [Setaria italica]
          Length = 531

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 467 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 526

Query: 408 RE 413
           R+
Sbjct: 527 RD 528


>gb|EMT20390.1| Transcription initiation factor IIF subunit alpha [Aegilops
           tauschii]
          Length = 668

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIR+VLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 604 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 663

Query: 408 RE 413
           RE
Sbjct: 664 RE 665


>gb|EMS62582.1| Transcription initiation factor IIF subunit alpha [Triticum urartu]
          Length = 369

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIR+VLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 305 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 364

Query: 408 RE 413
           RE
Sbjct: 365 RE 366


>gb|AFW68944.1| hypothetical protein ZEAMMB73_467667 [Zea mays]
          Length = 419

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 355 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEILKKISKIQKTNGHNYVVL 414

Query: 408 RE 413
           R+
Sbjct: 415 RD 416


>gb|AFW68943.1| hypothetical protein ZEAMMB73_467667 [Zea mays]
          Length = 502

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 438 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEILKKISKIQKTNGHNYVVL 497

Query: 408 RE 413
           R+
Sbjct: 498 RD 499


>gb|AFW68941.1| hypothetical protein ZEAMMB73_467667 [Zea mays]
          Length = 505

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 441 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEILKKISKIQKTNGHNYVVL 500

Query: 408 RE 413
           R+
Sbjct: 501 RD 502


>ref|XP_003573836.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Brachypodium distachyon]
          Length = 530

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIR+VLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 466 PVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVL 525

Query: 408 RE 413
           RE
Sbjct: 526 RE 527


>gb|ACN31587.1| unknown [Zea mays]
          Length = 528

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 464 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEILKKISKIQKTNGHNYVVL 523

Query: 408 RE 413
           R+
Sbjct: 524 RD 525


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
           gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 533

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+E+EIR+VLL   PVTTQ+LVARFK+RLK+ EDK AFADILRRISKIQKT+G SYV L
Sbjct: 471 PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVL 530

Query: 408 RE 413
           R+
Sbjct: 531 RD 532


>gb|ACL54486.1| unknown [Zea mays]
          Length = 531

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 228 PVSEDEIRSVLLTMDPVTTQELVARFKARLKTQEDKAAFADILRRISKIQKTNGHSYVKL 407
           PV+EDEIRSVLL + PVTTQ+LV+RFK+RL+  EDK AFA+IL++ISKIQKTNGH+YV L
Sbjct: 467 PVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGAEDKNAFAEILKKISKIQKTNGHNYVVL 526

Query: 408 RE 413
           R+
Sbjct: 527 RD 528