BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00005281
         (2748 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   949   0.0  
ref|XP_006651760.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   929   0.0  
ref|XP_004955403.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   928   0.0  
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   928   0.0  
gb|EEC84648.1| hypothetical protein OsI_31541 [Oryza sativa Indi...   928   0.0  
gb|EEC76092.1| hypothetical protein OsI_13335 [Oryza sativa Indi...   925   0.0  
dbj|BAF34943.1| chromatin remodeling factor DDM1b [Oryza sativa ...   925   0.0  
dbj|BAD38081.1| putative chromatin complex subunit A101 [Oryza s...   924   0.0  
dbj|BAF34942.1| chromatin remodeling factor DDM1a [Oryza sativa ...   924   0.0  
ref|XP_002461392.1| hypothetical protein SORBIDRAFT_02g001960 [S...   915   0.0  
ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   915   0.0  
ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   914   0.0  
ref|XP_004981943.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   914   0.0  
gb|EOX91120.1| Chromatin remodeling 1 isoform 1 [Theobroma cacao]     910   0.0  
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   910   0.0  
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   910   0.0  
ref|XP_002310223.1| DECREASED DNA METHYLATION 1 family protein [...   910   0.0  
ref|XP_004981944.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   909   0.0  
ref|XP_004233969.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   905   0.0  
dbj|BAJ99536.1| predicted protein [Hordeum vulgare subsp. vulgare]    905   0.0  

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  949 bits (2453), Expect = 0.0
 Identities = 499/772 (64%), Positives = 565/772 (73%), Gaps = 5/772 (0%)
 Frame = +2

Query: 83   VKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXAKNGDTS 262
            VK +A ADSPTSVLEDEGI     + KM+ +  H  D                AKNGD+S
Sbjct: 7    VKDDASADSPTSVLEDEGICEEKIKVKMEDDILHPLD----------------AKNGDSS 50

Query: 263  LISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLYSEFLLE 442
            LIS  M  EEE L+  R                L D   +F+KLDELLTQTQLYSEFLLE
Sbjct: 51   LISGTMAKEEEMLMKERVKEEDAEQVVTQEAPHLNDS--QFTKLDELLTQTQLYSEFLLE 108

Query: 443  KMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRSREAVAP 622
            KMD IT     E E+E  +V                +YN RKAK AVAAMLTRS+E   P
Sbjct: 109  KMDSITFNRVEEKESEIVEVKKRGRGSKRK-----AEYNNRKAKRAVAAMLTRSKEGATP 163

Query: 623  EDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTI 802
            ED +LTEEER  KEQA LVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTI
Sbjct: 164  EDVNLTEEERAEKEQAGLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTI 223

Query: 803  QTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERMEIRQKH 982
            QTIGFLAHLKGKGLDGPY++IAPLSTLSNW NE+ RF PSIN IIYHG++KER +IR K+
Sbjct: 224  QTIGFLAHLKGKGLDGPYLVIAPLSTLSNWANEIKRFVPSINAIIYHGNRKERDQIRMKY 283

Query: 983  MPKAVGPKYPLIITSYEVVLNDAKCLARH-QWKYVVVDEGHRXXXXXXXXXXXXXXXXXX 1159
            MP+ +GPK+P+I+TSYEV LNDA+   RH  WKY+VVDEGHR                  
Sbjct: 284  MPRTIGPKFPIILTSYEVALNDARKYLRHYNWKYLVVDEGHRLKNSKCKLLKELKLLPVE 343

Query: 1160 XXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREECEEKRRV 1339
                 TGTPLQNNLAELWSLLNFILPDIFSSH+EFESWFDLSG+  NE+  EE EE++R 
Sbjct: 344  NKLLLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDLSGKCNNEAVVEELEERKRA 403

Query: 1340 QVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTFENYVEE 1519
            QV+SKLH+ILRPFLLRRMK DVEQMLPRKKEIILYA+MTEHQ+  +D LVNKT ENY++E
Sbjct: 404  QVVSKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQKNFKDHLVNKTLENYLKE 463

Query: 1520 KADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGKFHLFDR 1699
            KA       G++GKLNNL++QLRKNCNHPDLLES +DGS+ YP ++++VEQCGKF L DR
Sbjct: 464  KAST---GRGVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDR 520

Query: 1700 XXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEAFNDLSS 1879
                   RKHKVLIFSQWTK+LDI+EYY +EKGLEVCRIDGSV+L ERKRQIE FND++S
Sbjct: 521  LLARLFARKHKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNS 580

Query: 1880 TVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATS 2059
               +FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRLAT+
Sbjct: 581  NCRVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 640

Query: 2060 LSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPN--VXXXXXXXXXXXXXXXXXXXXIQ 2233
             S+EGR+LK+AF KLKLEHVVIGKGQF QER KPN  V                    IQ
Sbjct: 641  QSIEGRMLKRAFSKLKLEHVVIGKGQFQQERIKPNMDVLEEEDLLQLLQDQEDSEDKLIQ 700

Query: 2234 TDISEEDLVRVLDRSDLIREGSG--SCDEQKVDPIPLKGPGWEVVIPAKTNG 2383
            TDISEEDL R+LDRSDLI + S          D  PLKGPGWEV+ P  + G
Sbjct: 701  TDISEEDLDRILDRSDLIGDTSNDDGRSNSAADAFPLKGPGWEVMTPTASGG 752


>ref|XP_006651760.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Oryza brachyantha]
          Length = 753

 Score =  929 bits (2401), Expect = 0.0
 Identities = 474/719 (65%), Positives = 550/719 (76%), Gaps = 3/719 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERLLT--VRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI++AM  EE++L    V+                  DPN  F+KLDELL+QT
Sbjct: 33   AKNGDASLITDAMKEEEDKLHEERVKVEEEEEARKREEAARVAFDPNACFNKLDELLSQT 92

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATT-QYNTRKAKTAVAAM 592
            QLYSEFLLEKM+ I    GVE +AE + V              +  +YN +KAK AVAAM
Sbjct: 93   QLYSEFLLEKMETIADVEGVETQAEEEPVEEKKNGRGRKRKATSAPKYNDKKAKKAVAAM 152

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRSRE  +PED +LTEEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 153  LTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 212

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKGL GPY+IIAPLSTLSNWVNE++RF PS+  +IYHG K
Sbjct: 213  ADQMGLGKTIQTIGFLAHLKGKGLHGPYLIIAPLSTLSNWVNEISRFVPSMTGLIYHGDK 272

Query: 953  KERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXX 1132
              R E+R+K MPK+ GP +PLI+TSYE+ ++DAK LA ++WKYV+VDEGHR         
Sbjct: 273  AARAELRRKFMPKSTGPDFPLIVTSYEMAMSDAKHLAHYKWKYVIVDEGHRLKNSKCLLL 332

Query: 1133 XXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQR 1312
                          TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD S +   E Q+
Sbjct: 333  RELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSAK-GGEKQQ 391

Query: 1313 EECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVN 1492
            EE EEKRRV V+SKLH+ILRPFLLRRMKEDVEQMLPRKKEII+YA+MT+HQ++IQ+ LV 
Sbjct: 392  EESEEKRRVNVVSKLHAILRPFLLRRMKEDVEQMLPRKKEIIIYANMTDHQKQIQNHLVE 451

Query: 1493 KTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQ 1672
            +TF+ Y+ EK++ V+ +PG++ KLNNL+IQLRKNCNHPDLLES YD +  YP ++KL+EQ
Sbjct: 452  QTFDKYLHEKSEIVLRKPGIKAKLNNLLIQLRKNCNHPDLLESAYDSTGLYPPVEKLMEQ 511

Query: 1673 CGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQ 1852
            CGKF L +R       RKHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQ
Sbjct: 512  CGKFQLLNRLLNLLLSRKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQ 571

Query: 1853 IEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 2032
            I  FNDL+S+++IF+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQ+RP
Sbjct: 572  IAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQSRP 631

Query: 2033 VHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXX 2212
            VHVYRLATS SVEGRI+KKAFGKL+LEHVVIGKGQF Q+R KPNV               
Sbjct: 632  VHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNVLNEGELLALLRDEQG 691

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                 IQTDIS+EDLV+V+DRSDL        D      +PLKGPGWEVV+P K+ GGM
Sbjct: 692  AEDRMIQTDISDEDLVKVMDRSDLT---GPPADADAAPLLPLKGPGWEVVVPTKSGGGM 747


>ref|XP_004955403.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Setaria
            italica] gi|514724083|ref|XP_004955404.1| PREDICTED:
            ATP-dependent DNA helicase DDM1-like isoform X2 [Setaria
            italica]
          Length = 806

 Score =  928 bits (2399), Expect = 0.0
 Identities = 479/718 (66%), Positives = 551/718 (76%), Gaps = 2/718 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLR--DPNVRFSKLDELLTQT 415
            AKNGD SLI+E M  EEE+L   R                    DP  R++KLDELLT+T
Sbjct: 89   AKNGDASLITEVMKKEEEQLEEARLKAEEEEEARKREEAARLAFDPETRYNKLDELLTKT 148

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAML 595
            QL+S+FLLEKMD I  + GVE +AE  +V             A  QYN +KAKTAVAAML
Sbjct: 149  QLFSQFLLEKMDQIADE-GVETQAEEPEVEEKKKGRGRKRK-AKPQYNDKKAKTAVAAML 206

Query: 596  TRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILA 775
            TRSRE    E+ +L+EEER  KEQA LVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILA
Sbjct: 207  TRSREDRLAENCTLSEEERWEKEQANLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILA 266

Query: 776  DQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKK 955
            DQMGLGKTIQTIGFLAHLKGKG+ GPY+IIAPLSTLSNWVNE++RF PS+ +IIYHG K 
Sbjct: 267  DQMGLGKTIQTIGFLAHLKGKGMHGPYLIIAPLSTLSNWVNEISRFTPSLASIIYHGDKV 326

Query: 956  ERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXXX 1135
             R EIR+K MPK VGP +P+++TSYE+ ++DAK LA H WKYVVVDEGHR          
Sbjct: 327  ARAEIRRKFMPKTVGPDFPIVVTSYEMAMSDAKFLAHHTWKYVVVDEGHRLKNSKCKLLR 386

Query: 1136 XXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQRE 1315
                         TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD SG+  NE  +E
Sbjct: 387  EMKRITMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSGK-GNEEHQE 445

Query: 1316 ECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNK 1495
            E EEKRRV V+SKLH+ILRPFLLRRMKEDVEQMLPRKKEII+YA+MTEHQ++IQD LV K
Sbjct: 446  ETEEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLPRKKEIIIYANMTEHQKQIQDHLVEK 505

Query: 1496 TFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQC 1675
            TF++Y+ E++D V+ RPG+R KL+NL+IQLRKNCNHPDLLES +D +  YP ++K++EQC
Sbjct: 506  TFDDYLHEESDIVLKRPGIRSKLHNLLIQLRKNCNHPDLLESPFDSTTLYPPVEKILEQC 565

Query: 1676 GKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQI 1855
            GKF LF R       +KHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQI
Sbjct: 566  GKFQLFVRLLNFLLSQKHKVLIFSQWTKVLDIIEYYLDSKGLDVCRIDGSVKLEERRRQI 625

Query: 1856 EAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV 2035
              FNDL+S++ IFLLSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV
Sbjct: 626  AEFNDLNSSMDIFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV 685

Query: 2036 HVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXXX 2215
            HVYRLATS SVEGRI+K+AFGKLKLEHVVIGKGQF Q+R KPN                 
Sbjct: 686  HVYRLATSHSVEGRIIKRAFGKLKLEHVVIGKGQFEQDRSKPNALDEAELLALLRDEQAD 745

Query: 2216 XXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                IQTDI++EDL++++DRSDL     G+ D   +  IPLKGPGWEVV+P K+ GGM
Sbjct: 746  EDKLIQTDITDEDLLKLMDRSDLCGP-PGAADAAPL--IPLKGPGWEVVVPTKSGGGM 800


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
            communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
            remodeling complex ATPase ISW1, putative [Ricinus
            communis]
          Length = 788

 Score =  928 bits (2399), Expect = 0.0
 Identities = 500/785 (63%), Positives = 572/785 (72%), Gaps = 7/785 (0%)
 Frame = +2

Query: 50   ERESGMEIESVVKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXX 229
            ++E  M  ES +K++A ADSPTSVLEDE       +EK  I+                  
Sbjct: 29   QKELEMAAESEMKNDASADSPTSVLEDEE----KCKEKTVID--------------LEKD 70

Query: 230  XXXXAKNGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLT 409
                AKNGD SL+S AM  EEE+LL  R                L D   +F+KLDELLT
Sbjct: 71   ILLDAKNGDISLLSRAMAEEEEKLLEARVKEEAEQGKEPEEAH-LND--AQFTKLDELLT 127

Query: 410  QTQLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAA 589
            QTQLYSEFLLEKMD+IT +NGVE E   +               A  +YN+RKA  AVAA
Sbjct: 128  QTQLYSEFLLEKMDEIT-RNGVEHETGTETAQKKRGRGSKRK--AAAEYNSRKATRAVAA 184

Query: 590  MLTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGI 769
            MLTRS E    EDA+LTEEER  KEQ ELVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGI
Sbjct: 185  MLTRSEEVEKTEDANLTEEERLEKEQRELVPLLTGGKLKSYQIKGVKWLISLWQNGLNGI 244

Query: 770  LADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGS 949
            LADQMGLGKTIQTI FLAHLKG GLDGPY++IAPLSTLSNWVNE++RFAPS+N IIYHG 
Sbjct: 245  LADQMGLGKTIQTISFLAHLKGNGLDGPYLVIAPLSTLSNWVNEISRFAPSMNAIIYHGD 304

Query: 950  KKERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARH-QWKYVVVDEGHRXXXXXXX 1126
            KK+R E+R+KHMP+++G K+P+IITSYE+ L+DAK   RH  WKYVVVDEGHR       
Sbjct: 305  KKQRDELRRKHMPRSIGSKFPIIITSYEIALSDAKKYLRHFNWKYVVVDEGHRLKNSKCK 364

Query: 1127 XXXXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENES 1306
                            TGTPLQNNLAELWSLLNFILPDIF SH+EFESWFDLSG+  +ES
Sbjct: 365  LLKELKYIPMENKLLLTGTPLQNNLAELWSLLNFILPDIFQSHEEFESWFDLSGKASSES 424

Query: 1307 QREECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLL 1486
              EE EEKR+ QVI+KLH ILRPFLLRR+K DVEQMLPRKKEIILYA++TEHQ+  QD L
Sbjct: 425  M-EEVEEKRKAQVIAKLHGILRPFLLRRLKADVEQMLPRKKEIILYATLTEHQKNFQDHL 483

Query: 1487 VNKTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLV 1666
            +NKT E ++ EK  +     G++GKLNNL+IQLRKNCNHPDLLES +DGS FYP ++++V
Sbjct: 484  INKTLEKHLREKIGH-----GMKGKLNNLMIQLRKNCNHPDLLESAFDGSNFYPPVEQIV 538

Query: 1667 EQCGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERK 1846
            EQCGKF L +R        KHKVLIFSQWTK+LDI++YY +EKGLEVCRIDGSVKL ERK
Sbjct: 539  EQCGKFRLLERLLNRLFALKHKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERK 598

Query: 1847 RQIEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT 2026
            RQIE FN++ S   IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT
Sbjct: 599  RQIEEFNNVDSNYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT 658

Query: 2027 RPVHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNV---XXXXXXXXXX 2197
            +PVHVYRLAT+ SVEGRILK+AF KLKLEHVVIGKGQFHQER K N              
Sbjct: 659  KPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERMKSNSIVDMEEEDILALL 718

Query: 2198 XXXXXXXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQK---VDPIPLKGPGWEVVIP 2368
                      IQTDIS+EDL R+LDRSDL+  G+ + D++    +D IPLKGPGWEVVIP
Sbjct: 719  RNEETAEDKLIQTDISDEDLERILDRSDLV--GNLADDKENDAVMDAIPLKGPGWEVVIP 776

Query: 2369 AKTNG 2383
              T G
Sbjct: 777  TATGG 781


>gb|EEC84648.1| hypothetical protein OsI_31541 [Oryza sativa Indica Group]
          Length = 844

 Score =  928 bits (2399), Expect = 0.0
 Identities = 470/718 (65%), Positives = 546/718 (76%), Gaps = 2/718 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI++AM  EEE+L    V+                  DPN RF+KLDELL+QT
Sbjct: 125  AKNGDASLITDAMKEEEEKLHEARVKAEEEEVARKREEAARLAFDPNARFNKLDELLSQT 184

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAML 595
            QLYSEFLLEKM+ I    GV+  AE + V             +  +YN +KAK AVA ML
Sbjct: 185  QLYSEFLLEKMETIADVEGVQTHAEEEPVEKKNGRGRKRKATSAPKYNDKKAKKAVAVML 244

Query: 596  TRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILA 775
            TRS E  +PED +LTEEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGILA
Sbjct: 245  TRSHEDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGILA 304

Query: 776  DQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKK 955
            DQMGLGKTIQTIGFLAHLKGKGLDGPY+IIAPLSTLSNWVNE++RF PS+  +IYHG K 
Sbjct: 305  DQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMTGLIYHGDKA 364

Query: 956  ERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXXX 1135
             R EIR+K MPK  GP +PLI+TSYE+ ++DAK LA ++WKYV+VDEGHR          
Sbjct: 365  ARAEIRRKFMPKTTGPDFPLILTSYEMAMSDAKHLAHYKWKYVIVDEGHRLKNSKCLLLR 424

Query: 1136 XXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQRE 1315
                         TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD S +   E ++E
Sbjct: 425  ELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSAK-GGEEEQE 483

Query: 1316 ECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNK 1495
            + EEKR+V V+SKLH+ILRPFLLRRMKEDVE MLPRKKEII+YA+MT+HQ++IQ+ LV +
Sbjct: 484  DSEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTDHQKQIQNHLVEQ 543

Query: 1496 TFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQC 1675
            TF+ Y+ EK++ V+ +PG++ KLNNL+IQLRKNCNHPDLLES YD S  YP ++KL+EQC
Sbjct: 544  TFDQYLHEKSEIVLRKPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGLYPPVEKLLEQC 603

Query: 1676 GKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQI 1855
            GKF L +R       RKHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQI
Sbjct: 604  GKFQLLNRLLSLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQI 663

Query: 1856 EAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV 2035
              FNDL+S+++IF+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV
Sbjct: 664  AEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV 723

Query: 2036 HVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXXX 2215
            HVYRLATS SVEGRI+KKAFGKL+LEHVVIGKGQF Q+R KPN                 
Sbjct: 724  HVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLALLRDEQGD 783

Query: 2216 XXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                IQTDIS+EDL++V+DRSDL        +      +PLKGPGWEVV+P K+ GGM
Sbjct: 784  EDRMIQTDISDEDLLKVMDRSDLT---GPPANADAAPLVPLKGPGWEVVVPTKSGGGM 838


>gb|EEC76092.1| hypothetical protein OsI_13335 [Oryza sativa Indica Group]
          Length = 850

 Score =  925 bits (2391), Expect = 0.0
 Identities = 471/719 (65%), Positives = 545/719 (75%), Gaps = 3/719 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI++AM  EE++L    V+                  DPN RF+KLDELLTQT
Sbjct: 130  AKNGDASLITDAMKEEEDKLHEARVKADEEEEARKRAEAARLAFDPNARFNKLDELLTQT 189

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATT-QYNTRKAKTAVAAM 592
            QLYSEFLLEKM+ I    GV+   E + V              +  +YN +KAK AVAAM
Sbjct: 190  QLYSEFLLEKMETIADVEGVDTPDEEEPVEEKKKGRGRKRKATSAPKYNNKKAKKAVAAM 249

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRSRE  +PED +LTEEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 250  LTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 309

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKGLDGPY+IIAPLSTLSNWVNE++RF PS+  +IYHG K
Sbjct: 310  ADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMTGVIYHGDK 369

Query: 953  KERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXX 1132
              R EIR+K MPK  GP +PLI+TSYE+ ++DAK LA ++WKYV+VDEGHR         
Sbjct: 370  AARAEIRRKFMPKTTGPNFPLIVTSYEMAMSDAKQLAHYKWKYVIVDEGHRLKNSKCILL 429

Query: 1133 XXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQR 1312
                          TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD   +   E ++
Sbjct: 430  RELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFCAK-GGEEEQ 488

Query: 1313 EECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVN 1492
            EE EEKR+V V+SKLH+ILRPFLLRRMKEDVE MLPRKKEII+YA+MT HQ++IQ+ LV 
Sbjct: 489  EESEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTNHQKEIQNHLVE 548

Query: 1493 KTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQ 1672
            +TF+ Y+ EK++ V+ RPG++ KLNNL+IQLRKNCNHPDLLES YD S  YP ++KL+EQ
Sbjct: 549  QTFDEYLHEKSEIVLRRPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGMYPPVEKLLEQ 608

Query: 1673 CGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQ 1852
            CGKF L +R       RKHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQ
Sbjct: 609  CGKFQLLNRLLNLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQ 668

Query: 1853 IEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 2032
            I  FNDL+S+++IF+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRP
Sbjct: 669  IAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 728

Query: 2033 VHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXX 2212
            VHVYRLATS SVEGRI+KKAFGKL+LEHVVIGKGQF Q+R KPN                
Sbjct: 729  VHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLALLRDEQD 788

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                 IQTDI++EDL++V+DRSDL        +      +PLKGPGWEVV+P K+ GGM
Sbjct: 789  EEDRMIQTDITDEDLLKVMDRSDLT---GPPANADAAPLVPLKGPGWEVVVPTKSGGGM 844


>dbj|BAF34943.1| chromatin remodeling factor DDM1b [Oryza sativa Japonica Group]
            gi|116235011|dbj|BAF34945.1| chromatin remodeling factor
            DDM1b [Oryza sativa Japonica Group]
            gi|222625697|gb|EEE59829.1| hypothetical protein
            OsJ_12393 [Oryza sativa Japonica Group]
          Length = 849

 Score =  925 bits (2391), Expect = 0.0
 Identities = 471/719 (65%), Positives = 545/719 (75%), Gaps = 3/719 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI++AM  EE++L    V+                  DPN RF+KLDELLTQT
Sbjct: 129  AKNGDASLITDAMKEEEDKLHEARVKADEEEEARKRAEAARLAFDPNARFNKLDELLTQT 188

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATT-QYNTRKAKTAVAAM 592
            QLYSEFLLEKM+ I    GV+   E + V              +  +YN +KAK AVAAM
Sbjct: 189  QLYSEFLLEKMETIADVEGVDTPDEEEPVEEKKKGRGRKRKATSAPKYNNKKAKKAVAAM 248

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRSRE  +PED +LTEEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 249  LTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 308

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKGLDGPY+IIAPLSTLSNWVNE++RF PS+  +IYHG K
Sbjct: 309  ADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMTGVIYHGDK 368

Query: 953  KERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXX 1132
              R EIR+K MPK  GP +PLI+TSYE+ ++DAK LA ++WKYV+VDEGHR         
Sbjct: 369  AARAEIRRKFMPKTTGPNFPLIVTSYEMAMSDAKQLAHYKWKYVIVDEGHRLKNSKCILL 428

Query: 1133 XXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQR 1312
                          TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD   +   E ++
Sbjct: 429  RELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFCAK-GGEEEQ 487

Query: 1313 EECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVN 1492
            EE EEKR+V V+SKLH+ILRPFLLRRMKEDVE MLPRKKEII+YA+MT HQ++IQ+ LV 
Sbjct: 488  EESEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTNHQKEIQNHLVE 547

Query: 1493 KTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQ 1672
            +TF+ Y+ EK++ V+ RPG++ KLNNL+IQLRKNCNHPDLLES YD S  YP ++KL+EQ
Sbjct: 548  QTFDEYLHEKSEIVLRRPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGMYPPVEKLLEQ 607

Query: 1673 CGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQ 1852
            CGKF L +R       RKHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQ
Sbjct: 608  CGKFQLLNRLLNLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQ 667

Query: 1853 IEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 2032
            I  FNDL+S+++IF+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRP
Sbjct: 668  IAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 727

Query: 2033 VHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXX 2212
            VHVYRLATS SVEGRI+KKAFGKL+LEHVVIGKGQF Q+R KPN                
Sbjct: 728  VHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLALLRDEQD 787

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                 IQTDI++EDL++V+DRSDL        +      +PLKGPGWEVV+P K+ GGM
Sbjct: 788  EEDRMIQTDITDEDLLKVMDRSDLT---GPPANADAAPLVPLKGPGWEVVVPTKSGGGM 843


>dbj|BAD38081.1| putative chromatin complex subunit A101 [Oryza sativa Japonica Group]
          Length = 846

 Score =  924 bits (2389), Expect = 0.0
 Identities = 470/719 (65%), Positives = 546/719 (75%), Gaps = 3/719 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI++AM  EEE+L    V+                  DPN RF+KLDELL+QT
Sbjct: 126  AKNGDASLITDAMKEEEEKLHDARVKAEEEEVARKREEAARLAFDPNARFNKLDELLSQT 185

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATT-QYNTRKAKTAVAAM 592
            QLYSEFLLEKM+ I    GV+  AE + V              +  +YN +KAK AVA M
Sbjct: 186  QLYSEFLLEKMETIADVEGVQTHAEEEPVEEKKNGRGRKRKATSAPKYNDKKAKKAVAVM 245

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRS E  +PED +LTEEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 246  LTRSHEDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 305

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKGLDGPY+IIAPLSTLSNWVNE++RF PS+  +IYHG K
Sbjct: 306  ADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMTGLIYHGDK 365

Query: 953  KERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXX 1132
              R EIR+K MPK  GP +PLI+TSYE+ ++DAK LA ++WKYV+VDEGHR         
Sbjct: 366  AARAEIRRKFMPKTTGPDFPLIVTSYEMAMSDAKHLAHYKWKYVIVDEGHRLKNSKCLLL 425

Query: 1133 XXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQR 1312
                          TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD S +   E ++
Sbjct: 426  RELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSAK-GGEEEQ 484

Query: 1313 EECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVN 1492
            E+ EEKR+V V+SKLH+ILRPFLLRRMKEDVE MLPRKKEII+YA+MT+HQ++IQ+ LV 
Sbjct: 485  EDSEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTDHQKQIQNHLVE 544

Query: 1493 KTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQ 1672
            +TF+ Y+ EK++ V+ +PG++ KLNNL+IQLRKNCNHPDLLES YD S  YP ++KL+EQ
Sbjct: 545  QTFDQYLHEKSEIVLRKPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGLYPPVEKLLEQ 604

Query: 1673 CGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQ 1852
            CGKF L +R       RKHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQ
Sbjct: 605  CGKFQLLNRLLSLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQ 664

Query: 1853 IEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 2032
            I  FNDL+S+++IF+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRP
Sbjct: 665  IAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 724

Query: 2033 VHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXX 2212
            VHVYRLATS SVEGRI+KKAFGKL+LEHVVIGKGQF Q+R KPN                
Sbjct: 725  VHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLALLRDEQG 784

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                 IQTDIS+EDL++V+DRSDL        +      +PLKGPGWEVV+P K+ GGM
Sbjct: 785  DEDRMIQTDISDEDLLKVMDRSDLT---GPPANADAAPLVPLKGPGWEVVVPTKSGGGM 840


>dbj|BAF34942.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group]
            gi|116235009|dbj|BAF34944.1| chromatin remodeling factor
            DDM1a [Oryza sativa Japonica Group]
            gi|222641670|gb|EEE69802.1| hypothetical protein
            OsJ_29535 [Oryza sativa Japonica Group]
          Length = 845

 Score =  924 bits (2389), Expect = 0.0
 Identities = 470/719 (65%), Positives = 546/719 (75%), Gaps = 3/719 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI++AM  EEE+L    V+                  DPN RF+KLDELL+QT
Sbjct: 125  AKNGDASLITDAMKEEEEKLHDARVKAEEEEVARKREEAARLAFDPNARFNKLDELLSQT 184

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATT-QYNTRKAKTAVAAM 592
            QLYSEFLLEKM+ I    GV+  AE + V              +  +YN +KAK AVA M
Sbjct: 185  QLYSEFLLEKMETIADVEGVQTHAEEEPVEEKKNGRGRKRKATSAPKYNDKKAKKAVAVM 244

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRS E  +PED +LTEEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 245  LTRSHEDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 304

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKGLDGPY+IIAPLSTLSNWVNE++RF PS+  +IYHG K
Sbjct: 305  ADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMTGLIYHGDK 364

Query: 953  KERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXX 1132
              R EIR+K MPK  GP +PLI+TSYE+ ++DAK LA ++WKYV+VDEGHR         
Sbjct: 365  AARAEIRRKFMPKTTGPDFPLIVTSYEMAMSDAKHLAHYKWKYVIVDEGHRLKNSKCLLL 424

Query: 1133 XXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQR 1312
                          TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD S +   E ++
Sbjct: 425  RELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSAK-GGEEEQ 483

Query: 1313 EECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVN 1492
            E+ EEKR+V V+SKLH+ILRPFLLRRMKEDVE MLPRKKEII+YA+MT+HQ++IQ+ LV 
Sbjct: 484  EDSEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTDHQKQIQNHLVE 543

Query: 1493 KTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQ 1672
            +TF+ Y+ EK++ V+ +PG++ KLNNL+IQLRKNCNHPDLLES YD S  YP ++KL+EQ
Sbjct: 544  QTFDQYLHEKSEIVLRKPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGLYPPVEKLLEQ 603

Query: 1673 CGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQ 1852
            CGKF L +R       RKHKVLIFSQWTKVLDIIEYYL  KGL+VCRIDGSVKL ER+RQ
Sbjct: 604  CGKFQLLNRLLSLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQ 663

Query: 1853 IEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 2032
            I  FNDL+S+++IF+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRP
Sbjct: 664  IAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRP 723

Query: 2033 VHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXX 2212
            VHVYRLATS SVEGRI+KKAFGKL+LEHVVIGKGQF Q+R KPN                
Sbjct: 724  VHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLALLRDEQG 783

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                 IQTDIS+EDL++V+DRSDL        +      +PLKGPGWEVV+P K+ GGM
Sbjct: 784  DEDRMIQTDISDEDLLKVMDRSDLT---GPPANADAAPLVPLKGPGWEVVVPTKSGGGM 839


>ref|XP_002461392.1| hypothetical protein SORBIDRAFT_02g001960 [Sorghum bicolor]
            gi|241924769|gb|EER97913.1| hypothetical protein
            SORBIDRAFT_02g001960 [Sorghum bicolor]
          Length = 778

 Score =  915 bits (2366), Expect = 0.0
 Identities = 471/718 (65%), Positives = 542/718 (75%), Gaps = 2/718 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLR--DPNVRFSKLDELLTQT 415
            AKNGD SLI+EAM  EEE L   R                    DP  R++KLDELL+QT
Sbjct: 61   AKNGDASLITEAMKKEEEELEDTRLKAVEEEEARKREEAARLAFDPETRYNKLDELLSQT 120

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAML 595
            QLYSEFLLE MD I  +N VE +AE   V             A   YN +KAKTAVAAML
Sbjct: 121  QLYSEFLLENMDRIAEEN-VETQAEEPQVEEKKKGRGRKRK-AKPVYNDKKAKTAVAAML 178

Query: 596  TRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILA 775
            TRSRE    ED +L+EEER  KEQA LVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILA
Sbjct: 179  TRSREDRLAEDCTLSEEERWEKEQANLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILA 238

Query: 776  DQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKK 955
            DQMGLGKTIQTIGFLAHLKGKG+ GPY+IIAPLSTLSNWVNE++RF PS+ +IIYHG K 
Sbjct: 239  DQMGLGKTIQTIGFLAHLKGKGMHGPYLIIAPLSTLSNWVNEISRFTPSLASIIYHGDKA 298

Query: 956  ERMEIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXXX 1135
             R EIR+K MPK  GP +P+++TSYE+ + DAK LA H+WKYV+VDEGHR          
Sbjct: 299  ARAEIRRKFMPKNAGPDFPIVVTSYEMAMYDAKFLAVHRWKYVIVDEGHRLKNSKCLLLR 358

Query: 1136 XXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQRE 1315
                         TGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFD SG+   E   E
Sbjct: 359  ELKRIPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSGKGNGEKD-E 417

Query: 1316 ECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNK 1495
            E +E +R+ V+SKLH+ILRPFLLRRMKEDVEQ+LPRKKEII+YA+MTEHQ++IQ  LV K
Sbjct: 418  ETDENKRLHVVSKLHAILRPFLLRRMKEDVEQLLPRKKEIIIYANMTEHQKQIQHHLVEK 477

Query: 1496 TFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQC 1675
            TF+NY+ E++D ++ RPG++ +L+NL+IQLRKNCNHPDLLE+Q D    YP ++K++EQC
Sbjct: 478  TFDNYLNEESDIILKRPGIKARLHNLMIQLRKNCNHPDLLEAQVDSIGLYPPVEKILEQC 537

Query: 1676 GKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQI 1855
            GKF LFDR       +KHKVL+FSQWTKVLDIIEYYL  KG +VCRIDGSVKL ER+RQI
Sbjct: 538  GKFQLFDRLLNYLIEQKHKVLVFSQWTKVLDIIEYYLDSKGHDVCRIDGSVKLEERRRQI 597

Query: 1856 EAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV 2035
              FNDL+S++ IFLLSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV
Sbjct: 598  AEFNDLNSSMRIFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRPV 657

Query: 2036 HVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXXX 2215
            HVYRLATS SVEGRI+KKAFGKLKLEHVVIGKGQF QER KPNV                
Sbjct: 658  HVYRLATSHSVEGRIIKKAFGKLKLEHVVIGKGQFEQERAKPNVLNEGELLALLKDEQDE 717

Query: 2216 XXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
                IQTDIS+EDL++++DRSDL+    G+        +PLKGPGWEVV+P K+ GGM
Sbjct: 718  EDRMIQTDISDEDLLKLMDRSDLLGPPGGT---NATPLVPLKGPGWEVVVPTKSGGGM 772


>ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
            tuberosum] gi|565360381|ref|XP_006346948.1| PREDICTED:
            ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
            tuberosum]
          Length = 754

 Score =  915 bits (2364), Expect = 0.0
 Identities = 486/769 (63%), Positives = 557/769 (72%), Gaps = 8/769 (1%)
 Frame = +2

Query: 101  ADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXAKNGDTSLISEAM 280
            ADSP SVL +E         K+       ED                AKNGD SL+SE M
Sbjct: 16   ADSPVSVLAEEDTCKEKLAVKL-------EDEVFLD-----------AKNGDVSLLSELM 57

Query: 281  TAEEERLLTVRXXXXXXXXXXXXXXXDLRDP-------NVRFSKLDELLTQTQLYSEFLL 439
              EEE L+  R               ++ DP       +++FSKLDELLTQTQLYSEFLL
Sbjct: 58   KKEEENLIKARVKEE-----------EVNDPKEAPNLNDLQFSKLDELLTQTQLYSEFLL 106

Query: 440  EKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRSREAVA 619
            EKMD+IT   GVEDE +  +              A T YN +KAK AVAAML+RS+E  +
Sbjct: 107  EKMDNITVA-GVEDEEKGSE---DKKRGRGRKRKAETSYNNKKAKRAVAAMLSRSKEGGS 162

Query: 620  PEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKT 799
             ED++LTEEER  KEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKT
Sbjct: 163  VEDSTLTEEERADKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKT 222

Query: 800  IQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERMEIRQK 979
            IQTI FLAHLKG GLDGPY++IAPLSTLSNW+NE+ RF PSIN IIYHG KK+R EIR+K
Sbjct: 223  IQTISFLAHLKGNGLDGPYLVIAPLSTLSNWMNEIERFVPSINAIIYHGDKKQRDEIRRK 282

Query: 980  HMPKAVGPKYPLIITSYEVVLNDAKCLARHQ-WKYVVVDEGHRXXXXXXXXXXXXXXXXX 1156
            HMP+ +GPK+P++ITSYE+ + DAK   RH  WKY+VVDEGHR                 
Sbjct: 283  HMPRTIGPKFPIVITSYEIAMFDAKKFLRHYTWKYLVVDEGHRLKNSKCKLFKELKLLPI 342

Query: 1157 XXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREECEEKRR 1336
                  TGTPLQNNLAELWSLLNFILPDIFSS +EFESWFDLSGR  NE+Q+EE EEKRR
Sbjct: 343  ENKLLLTGTPLQNNLAELWSLLNFILPDIFSSLEEFESWFDLSGRCGNEAQKEEMEEKRR 402

Query: 1337 VQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTFENYVE 1516
             QV++KLH+ILRPFLLRR+K DVEQMLPRKKEIILYA+MTEHQ+K QD L+N+T E Y+ 
Sbjct: 403  TQVVAKLHAILRPFLLRRLKVDVEQMLPRKKEIILYATMTEHQKKFQDHLINQTLEGYLT 462

Query: 1517 EKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGKFHLFD 1696
            E   NV      RGKL NL+IQLRKNCNHPDLLES +DGS+ YP I+++V QCGKF L +
Sbjct: 463  E---NVSIGNHFRGKLTNLMIQLRKNCNHPDLLESAFDGSYHYPPIEQIVGQCGKFRLLE 519

Query: 1697 RXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEAFNDLS 1876
            R       RKHKVLIFSQWTKVLDI++YY +E+G +VC+IDG VKL ERKRQIE FND++
Sbjct: 520  RLLSELFARKHKVLIFSQWTKVLDIMDYYFSERGFDVCKIDGRVKLDERKRQIEEFNDIN 579

Query: 1877 STVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLAT 2056
            S   +FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRLAT
Sbjct: 580  SECRVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLAT 639

Query: 2057 SLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXXXXXXXIQT 2236
            +LSVEGR+LK+AF KLKLEHVVIGKGQF QER   +                      QT
Sbjct: 640  ALSVEGRMLKRAFSKLKLEHVVIGKGQFKQERSTTDTVEEEDLLALLRDDDNEEDRLTQT 699

Query: 2237 DISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNG 2383
            DIS+EDL RVLDRSDL+  G  S DE KV+  PLKGPGW+VV+P  + G
Sbjct: 700  DISDEDLQRVLDRSDLV-VGPASEDESKVNVAPLKGPGWDVVVPTASGG 747


>ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
            tuberosum] gi|565347157|ref|XP_006340600.1| PREDICTED:
            ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
            tuberosum]
          Length = 760

 Score =  914 bits (2362), Expect = 0.0
 Identities = 484/779 (62%), Positives = 561/779 (72%), Gaps = 6/779 (0%)
 Frame = +2

Query: 65   MEIESVVKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXA 244
            M  +  VK    ADSP SVLEDE     D   K++                         
Sbjct: 1    MVADEGVKDRTVADSPVSVLEDEDTCKEDLAVKLE------------------EEVSLDP 42

Query: 245  KNGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLY 424
            +NGD + I E M  EEE L+  R                L D   +F+KLDELLTQTQLY
Sbjct: 43   ENGDATHIPENMAKEEEILIRARAKEEEEQLNNLKEAPILND--TQFTKLDELLTQTQLY 100

Query: 425  SEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRS 604
            SEFLLEKMD+IT+ N  EDE ++                ATT YN  KAK AVAAMLTRS
Sbjct: 101  SEFLLEKMDNITTTNVKEDEEKS---VKENKKGRGAKRKATTSYNNNKAKRAVAAMLTRS 157

Query: 605  REAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM 784
            +E V  EDA+LTEEER  KEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM
Sbjct: 158  KEDVPIEDATLTEEERFEKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM 217

Query: 785  GLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERM 964
            GLGKTIQTI FLAHLKG GLDGPY++IAPLSTLSNW+NE+ RF PSIN IIYHG KK+R 
Sbjct: 218  GLGKTIQTIAFLAHLKGNGLDGPYLVIAPLSTLSNWLNEMERFVPSINAIIYHGDKKQRD 277

Query: 965  EIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARH-QWKYVVVDEGHRXXXXXXXXXXXX 1141
            EIR KHMP+  GP +P++ITSYE+ ++DA+   RH  WKY+VVDEGHR            
Sbjct: 278  EIRMKHMPRTTGPNFPIVITSYEIAMSDARKFLRHYSWKYLVVDEGHRLKNSKCKLIKEL 337

Query: 1142 XXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREEC 1321
                       TGTPLQNNLAELWSLLNFILPDIFSSH EFESWFDLSG++ NES++EE 
Sbjct: 338  KLLPIENKLLLTGTPLQNNLAELWSLLNFILPDIFSSHDEFESWFDLSGKFSNESEKEEM 397

Query: 1322 EEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTF 1501
            EE+R+ QV++KLH+ILRPFLLRR+K DVEQMLPRKKEIILYA++T++Q+K Q+ L+N+T 
Sbjct: 398  EERRKAQVVAKLHAILRPFLLRRLKVDVEQMLPRKKEIILYATLTDYQKKFQEHLINRTL 457

Query: 1502 ENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGK 1681
            E Y+ E   NV    G +G+LNNL+IQLRKNCNHPDLLES ++GS FYP ++++VEQCGK
Sbjct: 458  EGYLIE---NVSTGNGFKGRLNNLMIQLRKNCNHPDLLESIFNGSNFYPPVEQIVEQCGK 514

Query: 1682 FHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEA 1861
            F L D+       RKHKVLIFSQWT+VLD+++YY +E+G +VCRIDGSVKL ERKRQI+ 
Sbjct: 515  FRLLDQLLSKLFARKHKVLIFSQWTRVLDLMDYYFSERGFDVCRIDGSVKLDERKRQIKE 574

Query: 1862 FNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHV 2041
            FND+SS   IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHV
Sbjct: 575  FNDVSSKFRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV 634

Query: 2042 YRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKP--NVXXXXXXXXXXXXXXXX 2215
            YRL+T+LSVEGRILK+AF KLKLEHVVIGKGQF QE  KP  +V                
Sbjct: 635  YRLSTALSVEGRILKRAFSKLKLEHVVIGKGQFKQEMSKPSMDVTEEEDLLSLLRDRDSE 694

Query: 2216 XXXXIQTDISEEDLVRVLDRSD-LIREGSGSCD--EQKVDPIPLKGPGWEVVIPAKTNG 2383
                +QTD+S+EDL R+LDRSD LIR  SG     E  V+ +PLKGPGWEVVIP  T G
Sbjct: 695  EDKLVQTDVSDEDLQRILDRSDLLIRPPSGEDGDAESCVNVLPLKGPGWEVVIPTATGG 753


>ref|XP_004981943.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Setaria
            italica]
          Length = 839

 Score =  914 bits (2361), Expect = 0.0
 Identities = 475/723 (65%), Positives = 544/723 (75%), Gaps = 7/723 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI+EAM  EEE+L    V+                  DP  R+SKLDELLT+T
Sbjct: 117  AKNGDASLITEAMKKEEEQLEGARVKSEEEEEARKREEAAKQAFDPEARYSKLDELLTKT 176

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXX-ATTQYNTRKAKTAVAAM 592
            QL+SEFLLEKMD I  +  VE +AE                  A  QYN +KAKTAVAAM
Sbjct: 177  QLFSEFLLEKMDQIADQEVVEPQAEEPPAEEKKKGRGRKRKANAAPQYNDKKAKTAVAAM 236

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRSRE    +D +L+EEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 237  LTRSREERLADDCNLSEEERWKKEQANLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 296

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKG+ GPYMIIAPLSTLSNWVNE++RF PS+ +IIYHG K
Sbjct: 297  ADQMGLGKTIQTIGFLAHLKGKGMHGPYMIIAPLSTLSNWVNEISRFVPSVTSIIYHGDK 356

Query: 953  KERMEIRQKHMPK---AVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXX 1123
              R EIR+K MPK   AV P +P+++TSYE+ ++DAK LA ++WKYVVVDEGHR      
Sbjct: 357  AARAEIRRKFMPKIKTAVSPDFPIVVTSYEMAMSDAKFLAHYKWKYVVVDEGHRLKNSKC 416

Query: 1124 XXXXXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENE 1303
                             TGTPLQNNLAELWSLLNFILPDIF+SHQEFESWFD S +   E
Sbjct: 417  KLLREIKRIPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFASHQEFESWFDFSAKGSEE 476

Query: 1304 SQREECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDL 1483
              +EE EEKRRV V+SKLH+ILRPFLLRRMKEDVEQMLPRKKEII+YA+MTE Q++IQD 
Sbjct: 477  --KEETEEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLPRKKEIIIYANMTELQKRIQDH 534

Query: 1484 LVNKTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKL 1663
            LV KTF+ Y+ E++D V+ RPG++ KLN+L IQLRKNC+HPDLLE+ +  +  YP +DKL
Sbjct: 535  LVEKTFDVYLNEESDIVLRRPGIKAKLNSLFIQLRKNCSHPDLLEAAFGTTSLYPPVDKL 594

Query: 1664 VEQCGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHER 1843
            +EQCGKF L DR       RKHKVLIFSQWTKVLDI+EYYL  KGLEVCRIDG VKL ER
Sbjct: 595  LEQCGKFQLLDRLLTSLLARKHKVLIFSQWTKVLDIMEYYLDSKGLEVCRIDGGVKLEER 654

Query: 1844 KRQIEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ 2023
            +RQI  FND++S +++F+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQ
Sbjct: 655  RRQIAEFNDVNSNLNVFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQ 714

Query: 2024 TRPVHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXX 2203
            TRPVHVYRLATS SVEGRI+KKAFGKLKLEHVVIGKGQF QER KPNV            
Sbjct: 715  TRPVHVYRLATSNSVEGRIIKKAFGKLKLEHVVIGKGQFEQERAKPNVLEEGELLALLRD 774

Query: 2204 XXXXXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDP-IPLKGPGWEVVIPAKTN 2380
                    IQTDIS+EDL++++DRSDL    SG        P IPLKGPGWEVV+P K+ 
Sbjct: 775  EQAEEDRMIQTDISDEDLLKLMDRSDL----SGPPGAADATPLIPLKGPGWEVVVPTKSG 830

Query: 2381 GGM 2389
            GGM
Sbjct: 831  GGM 833


>gb|EOX91120.1| Chromatin remodeling 1 isoform 1 [Theobroma cacao]
          Length = 754

 Score =  910 bits (2353), Expect = 0.0
 Identities = 483/771 (62%), Positives = 565/771 (73%), Gaps = 5/771 (0%)
 Frame = +2

Query: 86   KSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXAKNGDTSL 265
            +++A A+SPTSVLEDE       EE +K+     E+ T              AKNGD+SL
Sbjct: 8    ENDASAESPTSVLEDEEKCE---EEIIKL-----EEETILD-----------AKNGDSSL 48

Query: 266  ISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLYSEFLLEK 445
            +S +M  EEE+L+  R                L D   +F++LDELLTQTQ+YSEFLLEK
Sbjct: 49   LSGSMVKEEEKLMEARLKEETKQEEPAEAVH-LND--TQFTRLDELLTQTQMYSEFLLEK 105

Query: 446  MDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRSREAVAPE 625
            M+DIT   G E EAEA                A  QYN RKAK AVAAMLTRS+E    E
Sbjct: 106  MEDITFI-GAEPEAEAPQ----KKRGRGSKRRAANQYNNRKAKRAVAAMLTRSKENEKTE 160

Query: 626  DASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 805
            D +LTEEE+  KEQ ELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ
Sbjct: 161  DVNLTEEEKIEKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 220

Query: 806  TIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERMEIRQKHM 985
            TI FLAHLKG G+DGPY+IIAPLSTLSNW+NE+ARFAPS+N IIYHG++KER EIR+K +
Sbjct: 221  TIAFLAHLKGNGMDGPYLIIAPLSTLSNWMNEIARFAPSMNAIIYHGNRKERDEIRRKLL 280

Query: 986  PKAVGPKYPLIITSYEVVLNDAK-CLARHQWKYVVVDEGHRXXXXXXXXXXXXXXXXXXX 1162
            PK +GPK+P+++TSYE+ ++DAK CL  ++WKYVVVDEGHR                   
Sbjct: 281  PKVIGPKFPIVVTSYEMAMSDAKKCLRHYEWKYVVVDEGHRLKNFNCKLVKELKHLHVGN 340

Query: 1163 XXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREECEEKRRVQ 1342
                TGTPLQNNLAELWSLLNFILPDIF SH+EFESWFD SG+   E  +EE EEKRR Q
Sbjct: 341  KLLLTGTPLQNNLAELWSLLNFILPDIFQSHEEFESWFDFSGKINGEVSKEEMEEKRRNQ 400

Query: 1343 VISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTFENYVEEK 1522
            V++KLH+ILRPFLLRRMK DVEQMLPRKKEIILYAS+TEHQ+  QD L+N+T E Y+ E+
Sbjct: 401  VVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYASLTEHQKNFQDHLLNQTLETYLRER 460

Query: 1523 ADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGKFHLFDRX 1702
             D+     G++GKLNNL+IQLRKNCNHPDLLES +DGS+ YP ++++VEQCGKF L DR 
Sbjct: 461  IDS---GRGVKGKLNNLMIQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFCLLDRL 517

Query: 1703 XXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEAFNDLSST 1882
                  R+HKVLIFSQWTK+LDI++YY +EKG +VCRIDGSVKL ER+RQI+ FND +S 
Sbjct: 518  LARLFERRHKVLIFSQWTKILDIMDYYFSEKGFKVCRIDGSVKLDERRRQIQEFNDENSN 577

Query: 1883 VSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSL 2062
              IF+LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRLAT+ 
Sbjct: 578  CRIFILSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAH 637

Query: 2063 SVEGRILKKAFGKLKLEHVVIGKGQFHQERGKP--NVXXXXXXXXXXXXXXXXXXXXIQT 2236
            SVE RILK+A+ KLKLEHVVIGKGQFHQER KP  N+                    IQT
Sbjct: 638  SVECRILKRAYSKLKLEHVVIGKGQFHQER-KPDNNLWEEEDLLALLRDEETAEDKMIQT 696

Query: 2237 DISEEDLVRVLDRSDLIREGSG--SCDEQKVDPIPLKGPGWEVVIPAKTNG 2383
            DIS+EDL R+LDRSDL+ E            D +PLKGPGWEVV+P  + G
Sbjct: 697  DISDEDLERLLDRSDLVTESDNGEKAKAATADAVPLKGPGWEVVLPTGSGG 747


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  910 bits (2353), Expect = 0.0
 Identities = 475/779 (60%), Positives = 564/779 (72%), Gaps = 6/779 (0%)
 Frame = +2

Query: 65   MEIESVVKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXA 244
            M +E   +++  A+SPTSVLEDE + NG+ E K++                        A
Sbjct: 72   MAVEEKPRADNSAESPTSVLEDEDLCNGEKEIKLE------------------EEIILEA 113

Query: 245  KNGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLY 424
            KNGD+SLIS+ M  EE++LL  R               +    N +F+KLDELLTQTQLY
Sbjct: 114  KNGDSSLISKEMAEEEQKLLEARVKEEEAKRLEDSTESEKLSDN-QFTKLDELLTQTQLY 172

Query: 425  SEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRS 604
            SEFLLEKMDDIT      +E E D  +            A  +YN +KAK AVAAMLTRS
Sbjct: 173  SEFLLEKMDDITF-----NEMEEDKKSVEKSSGRGSKRKAAARYNNKKAKRAVAAMLTRS 227

Query: 605  REAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM 784
            +E    ED +LT EER  KEQ+ELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM
Sbjct: 228  KEGEQDEDVNLTGEERIEKEQSELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM 287

Query: 785  GLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERM 964
            GLGKTIQTIGFLAHLKGKGLDGPY++IAPLSTLSNW+NE++RF P++N IIYHG KK+R 
Sbjct: 288  GLGKTIQTIGFLAHLKGKGLDGPYLVIAPLSTLSNWINEISRFVPTVNAIIYHGDKKQRD 347

Query: 965  EIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARH-QWKYVVVDEGHRXXXXXXXXXXXX 1141
            EIR+K MP+ +GPK+P+++TSYE+ ++DA+ + RH  WKY+VVDEGHR            
Sbjct: 348  EIRRKSMPRKIGPKFPIVVTSYEIAMSDARKVLRHYNWKYLVVDEGHRLKNSKCKLLKEL 407

Query: 1142 XXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREEC 1321
                       TGTPLQNNLAELWSLLNFILPD+FSS +EFESWFDLSG+   E ++EE 
Sbjct: 408  KYITVENKLLLTGTPLQNNLAELWSLLNFILPDVFSSSEEFESWFDLSGKSHAE-EKEET 466

Query: 1322 EEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTF 1501
            +E R+ QV++KLH ILRPFLLRRMK DVE MLPRKKEII+YA+MTE+Q+  Q+ LVNKT 
Sbjct: 467  QENRKAQVVAKLHGILRPFLLRRMKSDVELMLPRKKEIIMYANMTEYQKNFQEHLVNKTL 526

Query: 1502 ENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGK 1681
            EN++ EK        G +GKLNNL++QLRKNCNHPDLLES +D S+ YP +++LVEQCGK
Sbjct: 527  ENHLCEKGSG----RGFKGKLNNLMVQLRKNCNHPDLLESVFDDSYAYPPVEQLVEQCGK 582

Query: 1682 FHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEA 1861
            F L DR       RKHKVLIFSQWTK+LDI++YY +EKG EVCRIDGSVKL ERKRQI+ 
Sbjct: 583  FRLLDRLLTRLFERKHKVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQE 642

Query: 1862 FNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHV 2041
            FND++S   IF+LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ++PVHV
Sbjct: 643  FNDVNSNYRIFILSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQSKPVHV 702

Query: 2042 YRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKP---NVXXXXXXXXXXXXXXX 2212
            YRLAT+ S+EGRILK+AF KLKLEHVVI KGQFHQER KP   ++               
Sbjct: 703  YRLATAQSIEGRILKRAFSKLKLEHVVIEKGQFHQERTKPTAADIVEEEDILALLREEDS 762

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKV--DPIPLKGPGWEVVIPAKTNG 2383
                 IQT+IS+ DL R+LDRSDLI       ++ KV  +  PLKGPGWEVVIPA T G
Sbjct: 763  AEDKMIQTEISDADLERILDRSDLIVPTGSDNEKSKVSGNLYPLKGPGWEVVIPASTGG 821


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score =  910 bits (2352), Expect = 0.0
 Identities = 475/779 (60%), Positives = 563/779 (72%), Gaps = 6/779 (0%)
 Frame = +2

Query: 65   MEIESVVKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXA 244
            M +E   +++  A+SPTSVLEDE + NG+ E K++                        A
Sbjct: 66   MAVEEKPRADNSAESPTSVLEDEDLCNGEKEIKLE------------------EEIILEA 107

Query: 245  KNGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLY 424
            KNGD+SLIS+ M  EE++LL  R               +    N +F+KLDELLTQTQLY
Sbjct: 108  KNGDSSLISKEMAEEEQKLLEARVKEEEAKRLEDSTESEKLSDN-QFTKLDELLTQTQLY 166

Query: 425  SEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRS 604
            SEFLLEKMDDIT       E E D  +            A  +YN +KAK AVAAMLTRS
Sbjct: 167  SEFLLEKMDDITFS-----EMEEDKKSVEKSSGRGSKRKAAARYNNKKAKRAVAAMLTRS 221

Query: 605  REAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM 784
            +E    ED +LT EER  KEQ+ELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM
Sbjct: 222  KEGEQDEDVNLTGEERIEKEQSELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQM 281

Query: 785  GLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERM 964
            GLGKTIQTIGFLAHLKGKGLDGPY++IAPLSTLSNW+NE++RF P++N IIYHG KK+R 
Sbjct: 282  GLGKTIQTIGFLAHLKGKGLDGPYLVIAPLSTLSNWINEISRFVPTVNAIIYHGDKKQRD 341

Query: 965  EIRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARH-QWKYVVVDEGHRXXXXXXXXXXXX 1141
            EIR+K MP+ +GPK+P+++TSYE+ ++DA+ + RH  WKY+VVDEGHR            
Sbjct: 342  EIRRKSMPRKIGPKFPIVVTSYEIAMSDARKVLRHYNWKYLVVDEGHRLKNSKCKLLKEL 401

Query: 1142 XXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREEC 1321
                       TGTPLQNNLAELWSLLNFILPD+FSS +EFESWFDLSG+   E ++EE 
Sbjct: 402  KYITVENKLLLTGTPLQNNLAELWSLLNFILPDVFSSSEEFESWFDLSGKSHAE-EKEET 460

Query: 1322 EEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTF 1501
            +E R+ QV++KLH ILRPFLLRRMK DVE MLPRKKEII+YA+MTE+Q+  Q+ LVNKT 
Sbjct: 461  QENRKAQVVAKLHGILRPFLLRRMKSDVELMLPRKKEIIMYANMTEYQKNFQEHLVNKTL 520

Query: 1502 ENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGK 1681
            EN++ EK        G +GKLNNL++QLRKNCNHPDLLES +D S+ YP +++LVEQCGK
Sbjct: 521  ENHLCEKGSG----RGFKGKLNNLMVQLRKNCNHPDLLESVFDDSYAYPPVEQLVEQCGK 576

Query: 1682 FHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEA 1861
            F L DR       RKHKVLIFSQWTK+LDI++YY +EKG EVCRIDGSVKL ERKRQI+ 
Sbjct: 577  FRLLDRLLTRLFERKHKVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQE 636

Query: 1862 FNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHV 2041
            FND++S   IF+LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ++PVHV
Sbjct: 637  FNDVNSNYRIFILSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQSKPVHV 696

Query: 2042 YRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKP---NVXXXXXXXXXXXXXXX 2212
            YRLAT+ S+EGRILK+AF KLKLEHVVI KGQFHQER KP   ++               
Sbjct: 697  YRLATAQSIEGRILKRAFSKLKLEHVVIEKGQFHQERTKPTAADIVEEEDILALLREEDS 756

Query: 2213 XXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKV--DPIPLKGPGWEVVIPAKTNG 2383
                 IQT+IS+ DL R+LDRSDLI       ++ KV  +  PLKGPGWEVVIPA T G
Sbjct: 757  AEDKMIQTEISDADLERILDRSDLIVPTGSDNEKSKVSGNLYPLKGPGWEVVIPASTGG 815


>ref|XP_002310223.1| DECREASED DNA METHYLATION 1 family protein [Populus trichocarpa]
            gi|222853126|gb|EEE90673.1| DECREASED DNA METHYLATION 1
            family protein [Populus trichocarpa]
          Length = 754

 Score =  910 bits (2352), Expect = 0.0
 Identities = 484/778 (62%), Positives = 563/778 (72%), Gaps = 7/778 (0%)
 Frame = +2

Query: 77   SVVKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXAKNGD 256
            S V++EA ADSPTSVLEDE        EK KI                       AKNGD
Sbjct: 3    SEVENEAPADSPTSVLEDE--------EKCKIK----------EEVKLEEVIFVEAKNGD 44

Query: 257  TSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLYSEFL 436
            +SLIS++M  EEE+LL  R               +      ++++LD+LLTQTQLYSEFL
Sbjct: 45   SSLISKSMAEEEEKLLNSRIKEVQETVPEEAARLN----ESQYTRLDDLLTQTQLYSEFL 100

Query: 437  LEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRSREAV 616
            LE+MD IT+ NGVE E    D              A   YN+RKAK AV AMLTRS+E  
Sbjct: 101  LEQMDQITT-NGVEQE----DEPAKQSRGRGSKRKAAALYNSRKAKRAVTAMLTRSKEVE 155

Query: 617  APEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGK 796
              EDA+LTEEER  KEQ ELVPLLTGG+LKSYQ+KGVKWLISLWQNGLNGILADQMGLGK
Sbjct: 156  NAEDANLTEEERVEKEQRELVPLLTGGRLKSYQIKGVKWLISLWQNGLNGILADQMGLGK 215

Query: 797  TIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERMEIRQ 976
            TIQTIGFLAHL G GL+GPY++IAPLSTLSNWVNE++RF PS++ IIYHG+KK+R EIR+
Sbjct: 216  TIQTIGFLAHLIGNGLNGPYLVIAPLSTLSNWVNEISRFVPSMDAIIYHGNKKQRDEIRR 275

Query: 977  KHMPKAVGPKYPLIITSYEVVLNDAKCLARHQ-WKYVVVDEGHRXXXXXXXXXXXXXXXX 1153
            KHMP+++GPK+P+I+TSYE+ L+DAK   RH  WKY+VVDEGHR                
Sbjct: 276  KHMPRSIGPKFPIIVTSYEIALSDAKKHLRHYPWKYLVVDEGHRLKNSKCKLLKELKYLC 335

Query: 1154 XXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREECEEKR 1333
                   TGTPLQNNLAELWSLLNFILPDIF SH+EFESWFDLSG+  NE+ +EE EE+R
Sbjct: 336  VDNKLILTGTPLQNNLAELWSLLNFILPDIFQSHEEFESWFDLSGKCSNEAMKEEVEERR 395

Query: 1334 RVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTFENYV 1513
            R QV+ KLH+ILRPFLLRR+K DVEQMLPRKKEIILYA++TEHQ+K QD L+NKT E Y+
Sbjct: 396  RAQVVVKLHAILRPFLLRRLKNDVEQMLPRKKEIILYATLTEHQKKFQDHLINKTLEGYL 455

Query: 1514 EEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGKFHLF 1693
             EK D      G++G+L NL++QLRKNC HPDLLES +DGS+FYP ++++VEQCGKF L 
Sbjct: 456  REKMDT---GRGMKGRLTNLMVQLRKNCYHPDLLESAFDGSYFYPPVEQIVEQCGKFRLL 512

Query: 1694 DRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEAFNDL 1873
            D+        KHKVLIFSQWTKVLDI++YY +EKG EVCRIDGSV L ERKRQIE FND 
Sbjct: 513  DKLLNRLFALKHKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVNLDERKRQIEEFNDE 572

Query: 1874 SSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLA 2053
            +S   +FLLSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRLA
Sbjct: 573  NSQYRVFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLA 632

Query: 2054 TSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGK---PNVXXXXXXXXXXXXXXXXXXX 2224
            T+ S+EGRILK+AF KLKLEHVVIGKGQFH E+ K     V                   
Sbjct: 633  TAQSIEGRILKRAFSKLKLEHVVIGKGQFHLEQTKSKGTEVMEEDDILALLRDEETAEDK 692

Query: 2225 XIQTDISEEDLVRVLDRSDLIREGSGSCDEQKV---DPIPLKGPGWEVVIPAKTNGGM 2389
             IQTDIS+EDL R+LDRSDL+  GS   D + +      PLKGPGWEVVIP   NGGM
Sbjct: 693  LIQTDISDEDLERILDRSDLV-VGSSDDDTESIAATGSFPLKGPGWEVVIP-NANGGM 748


>ref|XP_004981944.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X2 [Setaria
            italica]
          Length = 838

 Score =  909 bits (2349), Expect = 0.0
 Identities = 475/723 (65%), Positives = 544/723 (75%), Gaps = 7/723 (0%)
 Frame = +2

Query: 242  AKNGDTSLISEAMTAEEERL--LTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQT 415
            AKNGD SLI+EAM  EEE+L    V+                  DP  R+SKLDELLT+T
Sbjct: 117  AKNGDASLITEAMKKEEEQLEGARVKSEEEEEARKREEAAKQAFDPEARYSKLDELLTKT 176

Query: 416  QLYSEFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXX-ATTQYNTRKAKTAVAAM 592
            QL+SEFLLEKMD I  +  VE +AE                  A  QYN +KAKTAVAAM
Sbjct: 177  QLFSEFLLEKMDQIADEV-VEPQAEEPPAEEKKKGRGRKRKANAAPQYNDKKAKTAVAAM 235

Query: 593  LTRSREAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGIL 772
            LTRSRE    +D +L+EEER  KEQA LVPL+TGGKLKSYQ+KGVKWLISLWQNGLNGIL
Sbjct: 236  LTRSREERLADDCNLSEEERWKKEQANLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGIL 295

Query: 773  ADQMGLGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSK 952
            ADQMGLGKTIQTIGFLAHLKGKG+ GPYMIIAPLSTLSNWVNE++RF PS+ +IIYHG K
Sbjct: 296  ADQMGLGKTIQTIGFLAHLKGKGMHGPYMIIAPLSTLSNWVNEISRFVPSVTSIIYHGDK 355

Query: 953  KERMEIRQKHMPK---AVGPKYPLIITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXX 1123
              R EIR+K MPK   AV P +P+++TSYE+ ++DAK LA ++WKYVVVDEGHR      
Sbjct: 356  AARAEIRRKFMPKIKTAVSPDFPIVVTSYEMAMSDAKFLAHYKWKYVVVDEGHRLKNSKC 415

Query: 1124 XXXXXXXXXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENE 1303
                             TGTPLQNNLAELWSLLNFILPDIF+SHQEFESWFD S +   E
Sbjct: 416  KLLREIKRIPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFASHQEFESWFDFSAKGSEE 475

Query: 1304 SQREECEEKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDL 1483
              +EE EEKRRV V+SKLH+ILRPFLLRRMKEDVEQMLPRKKEII+YA+MTE Q++IQD 
Sbjct: 476  --KEETEEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLPRKKEIIIYANMTELQKRIQDH 533

Query: 1484 LVNKTFENYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKL 1663
            LV KTF+ Y+ E++D V+ RPG++ KLN+L IQLRKNC+HPDLLE+ +  +  YP +DKL
Sbjct: 534  LVEKTFDVYLNEESDIVLRRPGIKAKLNSLFIQLRKNCSHPDLLEAAFGTTSLYPPVDKL 593

Query: 1664 VEQCGKFHLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHER 1843
            +EQCGKF L DR       RKHKVLIFSQWTKVLDI+EYYL  KGLEVCRIDG VKL ER
Sbjct: 594  LEQCGKFQLLDRLLTSLLARKHKVLIFSQWTKVLDIMEYYLDSKGLEVCRIDGGVKLEER 653

Query: 1844 KRQIEAFNDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ 2023
            +RQI  FND++S +++F+LSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQ
Sbjct: 654  RRQIAEFNDVNSNLNVFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQ 713

Query: 2024 TRPVHVYRLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXX 2203
            TRPVHVYRLATS SVEGRI+KKAFGKLKLEHVVIGKGQF QER KPNV            
Sbjct: 714  TRPVHVYRLATSNSVEGRIIKKAFGKLKLEHVVIGKGQFEQERAKPNVLEEGELLALLRD 773

Query: 2204 XXXXXXXXIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDP-IPLKGPGWEVVIPAKTN 2380
                    IQTDIS+EDL++++DRSDL    SG        P IPLKGPGWEVV+P K+ 
Sbjct: 774  EQAEEDRMIQTDISDEDLLKLMDRSDL----SGPPGAADATPLIPLKGPGWEVVVPTKSG 829

Query: 2381 GGM 2389
            GGM
Sbjct: 830  GGM 832


>ref|XP_004233969.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum
            lycopersicum]
          Length = 771

 Score =  905 bits (2340), Expect = 0.0
 Identities = 479/773 (61%), Positives = 560/773 (72%), Gaps = 1/773 (0%)
 Frame = +2

Query: 68   EIESVVKSEADADSPTSVLEDEGIANGDAEEKMKINGGHGEDSTXXXXXXXXXXXXXXAK 247
            E++ VV     ADSP SVL +E         K+       ED                AK
Sbjct: 25   EVKDVVTK---ADSPVSVLAEEDTCKEKLTVKL-------EDEVFLD-----------AK 63

Query: 248  NGDTSLISEAMTAEEERLLTVRXXXXXXXXXXXXXXXDLRDPNVRFSKLDELLTQTQLYS 427
            NGD SL+SE+M  EEE L+  R               +    +++FSKLDELLTQTQLYS
Sbjct: 64   NGDVSLLSESMKKEEENLIKARVKEEEVNNPKEAPNLN----DLQFSKLDELLTQTQLYS 119

Query: 428  EFLLEKMDDITSKNGVEDEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRSR 607
            EFLLEK+ +IT   GV+DE E  +                T YN +KAK AVAAML+RS+
Sbjct: 120  EFLLEKIINITM-TGVKDEEEGSE---DKKRGHGRKRKGETSYNNKKAKRAVAAMLSRSK 175

Query: 608  EAVAPEDASLTEEERTAKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMG 787
            E  + ED++LTEEER  KEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMG
Sbjct: 176  EGGSVEDSTLTEEERADKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMG 235

Query: 788  LGKTIQTIGFLAHLKGKGLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERME 967
            LGKTIQTI FLAHLKG GL GPY++IAPLSTLSNW+NE+ RF PSIN IIYHG+KK+R E
Sbjct: 236  LGKTIQTISFLAHLKGNGLHGPYLVIAPLSTLSNWMNEIERFVPSINAIIYHGNKKQRDE 295

Query: 968  IRQKHMPKAVGPKYPLIITSYEVVLNDAKCLARHQ-WKYVVVDEGHRXXXXXXXXXXXXX 1144
            IR+KHMP+ +GPK+P+++TSYE+ + DAK   RH  WKY+VVDEGHR             
Sbjct: 296  IRRKHMPRTIGPKFPIVLTSYEIAMVDAKKFLRHYTWKYLVVDEGHRLKNSKCKLFKELK 355

Query: 1145 XXXXXXXXXXTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREECE 1324
                      TGTPLQNNLAELWSLLNFILPDIFSS +EFESWFDLSGR  NE+Q+EE E
Sbjct: 356  LLPIENKLLLTGTPLQNNLAELWSLLNFILPDIFSSLEEFESWFDLSGRCGNEAQKEEVE 415

Query: 1325 EKRRVQVISKLHSILRPFLLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTFE 1504
            EKRR QV++KLH+ILRPFLLRR+K DVEQMLPRKKEIILYA+MTEHQ+K QD L+N+T E
Sbjct: 416  EKRRTQVVAKLHAILRPFLLRRLKVDVEQMLPRKKEIILYATMTEHQKKFQDHLINRTLE 475

Query: 1505 NYVEEKADNVVWRPGLRGKLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGKF 1684
             Y+ E   NV      RGKL NL+IQLRKNCNHPDLLES +DGS+ YP I+++V QCGKF
Sbjct: 476  GYLTE---NVSLGNHFRGKLTNLMIQLRKNCNHPDLLESAFDGSYHYPPIEQIVGQCGKF 532

Query: 1685 HLFDRXXXXXXXRKHKVLIFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEAF 1864
             L +R       RKHKVLIFSQWT+VLDI++YY +E+G +VC+IDG VKL ER+RQI+ F
Sbjct: 533  CLLERLLSELFARKHKVLIFSQWTRVLDIMDYYFSERGFDVCKIDGRVKLDERRRQIKEF 592

Query: 1865 NDLSSTVSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVY 2044
            ND++S   +FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVY
Sbjct: 593  NDVNSECRVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 652

Query: 2045 RLATSLSVEGRILKKAFGKLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXXXXXX 2224
            RLAT+LSVEGR+LK+AF KLKLEHVVIGKGQF QER   +                    
Sbjct: 653  RLATALSVEGRMLKRAFSKLKLEHVVIGKGQFKQERSTTDTMEEEDLLTLLRDDDTEEDR 712

Query: 2225 XIQTDISEEDLVRVLDRSDLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNG 2383
              QTDIS+EDL R+LDRSDL+  GS S DE KV+ +PLKGPGW+VV+P  + G
Sbjct: 713  LTQTDISDEDLQRILDRSDLV-VGSASEDESKVNVVPLKGPGWDVVVPTASGG 764


>dbj|BAJ99536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 826

 Score =  905 bits (2340), Expect = 0.0
 Identities = 483/817 (59%), Positives = 572/817 (70%), Gaps = 24/817 (2%)
 Frame = +2

Query: 11   TPPPL*NY**MALERESGMEIESVVKS---------EADADSPTSVLEDE---GIANGDA 154
            T PP+     M + R +G + E+   +         +AD DSP SVL +E   G  +G A
Sbjct: 11   TSPPVAAAAEMVVARANGAKREAAAAAAAANTTAAADADPDSPISVLGEEKMSGSKDGKA 70

Query: 155  EEKMKINGGHGE--------DSTXXXXXXXXXXXXXXAKNGDTSLISEAMTAEEERLLTV 310
             E +K NGG           +                AKNGDTSLI+E MT EEE +   
Sbjct: 71   GE-LKANGGEAHPIDGALKAEELLLNSVKEETSFELVAKNGDTSLITEVMTKEEEEMYQA 129

Query: 311  RXXXXXXXXXXXXXXXDLR--DPNVRFSKLDELLTQTQLYSEFLLEKMDDITS--KNGVE 478
            R                 +  DP  +F+KLDELLTQTQLYSEFLLEKM+ IT      VE
Sbjct: 130  RIKLEEEEEARKREEAARQAFDPKAKFNKLDELLTQTQLYSEFLLEKMEQITDVKPTAVE 189

Query: 479  DEAEADDVAXXXXXXXXXXXXATTQYNTRKAKTAVAAMLTRSREAVAPEDASLTEEERTA 658
             + E + V             A  QYN +KAKTAVAAMLTRSRE  + +D +LTEEE+  
Sbjct: 190  IKDEEEPVEEQKKGRGKKRKAAKAQYNDKKAKTAVAAMLTRSREDRSADDGTLTEEEKWE 249

Query: 659  KEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGK 838
            +EQA LVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG 
Sbjct: 250  REQANLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN 309

Query: 839  GLDGPYMIIAPLSTLSNWVNEVARFAPSINTIIYHGSKKERMEIRQKHMPKAVGPKYPLI 1018
            GL GPYM+IAPLSTLSNW+NE+ RF PS+N +IYHG K  R E+R+K+MPK VGP +P+I
Sbjct: 310  GLHGPYMVIAPLSTLSNWLNELMRFTPSLNGLIYHGDKAARTELRRKYMPKTVGPDFPII 369

Query: 1019 ITSYEVVLNDAKCLARHQWKYVVVDEGHRXXXXXXXXXXXXXXXXXXXXXXXTGTPLQNN 1198
            ITSYE+ + DAK LA ++WKYVVVDEGHR                       TGTPLQNN
Sbjct: 370  ITSYEMAMFDAKFLANYKWKYVVVDEGHRLKNTKCKLLRELRRIPMDNKLLLTGTPLQNN 429

Query: 1199 LAELWSLLNFILPDIFSSHQEFESWFDLSGRYENESQREECEEKRRVQVISKLHSILRPF 1378
            LAELWSLLNFILPDIFSSH+EFESWFD S + + E   EE +EK+RV ++SKLH+ILRPF
Sbjct: 430  LAELWSLLNFILPDIFSSHEEFESWFDFSAKAD-EGLEEETDEKKRVLIVSKLHAILRPF 488

Query: 1379 LLRRMKEDVEQMLPRKKEIILYASMTEHQRKIQDLLVNKTFENYVEEKADNVVWRPGLRG 1558
            LLRRMKE+VE MLPRKKEII+YA+MTEHQ++IQ  L+ +TF++Y+ E AD V+ RPG++ 
Sbjct: 489  LLRRMKENVEHMLPRKKEIIIYANMTEHQKQIQSHLIEETFDDYLHESADIVLRRPGIKT 548

Query: 1559 KLNNLVIQLRKNCNHPDLLESQYDGSWFYPSIDKLVEQCGKFHLFDRXXXXXXXRKHKVL 1738
            KLNNL+IQLRKNC HPDL  S +D +  YP +DKL+EQCGKF L DR       R HKVL
Sbjct: 549  KLNNLLIQLRKNCGHPDLFHSAFDSNSLYPPVDKLMEQCGKFQLLDRLLDALIKRNHKVL 608

Query: 1739 IFSQWTKVLDIIEYYLTEKGLEVCRIDGSVKLHERKRQIEAFNDLSSTVSIFLLSTRAGG 1918
            IFSQWTK+LDI++YYL+EKGL+VCRIDGSVKL +R+ QI AFNDL+S +++F+LSTRAGG
Sbjct: 609  IFSQWTKILDILDYYLSEKGLKVCRIDGSVKLEDRRNQIAAFNDLNSGMNVFILSTRAGG 668

Query: 1919 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSLSVEGRILKKAFG 2098
            LGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRLATS SVEGRI+KKAFG
Sbjct: 669  LGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLATSNSVEGRIIKKAFG 728

Query: 2099 KLKLEHVVIGKGQFHQERGKPNVXXXXXXXXXXXXXXXXXXXXIQTDISEEDLVRVLDRS 2278
            KLKLEHVVIGKGQF Q+  KPN                     IQTDIS+EDL++V+DR 
Sbjct: 729  KLKLEHVVIGKGQFQQDAAKPNALDEGELLALLRDEQDEEDRMIQTDISDEDLLKVMDRR 788

Query: 2279 DLIREGSGSCDEQKVDPIPLKGPGWEVVIPAKTNGGM 2389
            DL    + +     V   PLKGPGWEVV+ A   GGM
Sbjct: 789  DLTGARAAA---DAVPHFPLKGPGWEVVLAA--GGGM 820