BLASTX nr result

ID: Stemona21_contig00004755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00004755
         (1246 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Popu...    60   1e-06

>ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Populus trichocarpa]
           gi|550332329|gb|EEE89356.2| hypothetical protein
           POPTR_0008s03290g [Populus trichocarpa]
          Length = 279

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 38/95 (40%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
 Frame = +3

Query: 3   GRGDRYGSDRYAPAXXXXXXXXXXXXXXXXAQNGYGKEXXXXXXXXXXXXXXXXXXXXXP 182
           G  DRY SDRY P                 AQNGYGK+                      
Sbjct: 192 GGRDRYASDRYPPPNGDRFAGDRYSGSDRYAQNGYGKDRGYDRDGGPRGGND-------- 243

Query: 183 TRYEGGG-------YKERPGPYDRPSRGGRASSYE 266
            RY  GG       YK RPGPYDRPSRGGR SS+E
Sbjct: 244 -RYGSGGPSRNDRSYKNRPGPYDRPSRGGRPSSFE 277


Top