BLASTX nr result
ID: Stemona21_contig00004281
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00004281
(1355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 250 8e-64
ref|XP_002531375.1| RNA and export factor binding protein, putat... 246 1e-62
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 244 5e-62
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 243 1e-61
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 243 2e-61
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 242 2e-61
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 240 1e-60
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 237 1e-59
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 236 1e-59
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera] 235 4e-59
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 234 5e-59
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 232 2e-58
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer... 231 5e-58
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe... 229 3e-57
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 228 6e-57
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi... 228 6e-57
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 226 1e-56
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo... 224 5e-56
ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solan... 221 7e-55
ref|XP_004294581.1| PREDICTED: THO complex subunit 4-A-like [Fra... 219 3e-54
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 250 bits (639), Expect = 8e-64
Identities = 141/250 (56%), Positives = 160/250 (64%), Gaps = 3/250 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+ALDMSLDDLIK NR NR PY+ KA
Sbjct: 1 MSNALDMSLDDLIK----NNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKA 56
Query: 358 PDAMWQHDMYSNQMAAV---ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 528
P+ WQHDM+++Q AA A R +IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRY
Sbjct: 57 PETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRY 116
Query: 529 SIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIF 708
SIHYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTNI TPA VP +
Sbjct: 117 SIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVT 176
Query: 709 NGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADLD 888
NG+FGNSNG +S GR S P E ++ + LDADL+
Sbjct: 177 NGTFGNSNGGLRSAQGRVGSQGRP---RGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLE 233
Query: 889 KYHSEAMQIN 918
KYHSEAMQIN
Sbjct: 234 KYHSEAMQIN 243
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 246 bits (629), Expect = 1e-62
Identities = 140/255 (54%), Positives = 158/255 (61%), Gaps = 8/255 (3%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MSSALDMSLDD+IK NR NR APYA KA
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFN-----NRGTNRAAPYAAAKA 55
Query: 358 PDAMWQHDMYSNQ--------MAAVATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVG 513
P++ WQHDM+++Q +RA IETGTKLYISNLEYGVSNEDIKELFSEVG
Sbjct: 56 PESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVG 115
Query: 514 DLKRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAP 693
DLKRYSIHYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTNI TPA
Sbjct: 116 DLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 175
Query: 694 VPQIFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQAL 873
P NG+FGNSNG + G GRG + P E ++ + L
Sbjct: 176 TPAA-NGNFGNSNGAPRGGQGRGGTMRRP--RGASSDGRGFGRGRGRGRGRGEKVSAEDL 232
Query: 874 DADLDKYHSEAMQIN 918
DADL+KYHSEAMQ N
Sbjct: 233 DADLEKYHSEAMQTN 247
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 244 bits (624), Expect = 5e-62
Identities = 136/254 (53%), Positives = 159/254 (62%), Gaps = 7/254 (2%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MSSALDMSLDDLIK NR+ NR APY+ GKA
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQ-NRTANRAAPYSMGKA 59
Query: 358 ----PDAMWQHDMYSNQMAAV---ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGD 516
P+ WQHD++++ + A R +IETGTKLYISNL+YGVSNEDIKELFSEVGD
Sbjct: 60 FQAAPETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGD 119
Query: 517 LKRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPV 696
LKRYSIHYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTN+VTPAP+
Sbjct: 120 LKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPI 179
Query: 697 PQIFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALD 876
PQ+ NG NGI +S RG+ + E ++ LD
Sbjct: 180 PQVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADLD 239
Query: 877 ADLDKYHSEAMQIN 918
ADL+KYHSEAMQIN
Sbjct: 240 ADLEKYHSEAMQIN 253
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 243 bits (621), Expect = 1e-61
Identities = 139/252 (55%), Positives = 156/252 (61%), Gaps = 5/252 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATG-K 354
MS L MSLDD+IK NR+ NR APYA K
Sbjct: 1 MSDPLSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGPARRVP----NRAPNRAAPYAAAPK 56
Query: 355 APDAMWQHDMYSNQ---MAAVATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 525
AP+ WQHDMY +Q AA A RA +I+TGTKLYISNLEYGVSNEDIKELFSEVGDLKR
Sbjct: 57 APETTWQHDMYMDQGTAFAAQAGRASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKR 116
Query: 526 YSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQI 705
Y+IHYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTN+ TPA P
Sbjct: 117 YAIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPP 176
Query: 706 FNGSFGNSNGISKSGPGRGSSTVW-PXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDAD 882
NGSFGNSNG+ + G GRG P E I+ LDAD
Sbjct: 177 ANGSFGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRGTGEKISADDLDAD 236
Query: 883 LDKYHSEAMQIN 918
L+KYH+EAMQ N
Sbjct: 237 LEKYHAEAMQEN 248
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 243 bits (619), Expect = 2e-61
Identities = 134/255 (52%), Positives = 162/255 (63%), Gaps = 8/255 (3%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+A+DMSLDD+IK NR+ NR APYA KA
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLP-----NRAANRAAPYAPAKA 55
Query: 358 PDAMWQHDMYSNQMAAVAT------RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDL 519
P+A WQHD+Y++Q A A RA SIETGTKLYISNL+YGVSN+DIKELF+EVGDL
Sbjct: 56 PEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDL 115
Query: 520 KRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTP--AP 693
KR+++HYD+SGRSKGTAEV F+RR DA +A+KRYNNVQLDGKPM IEI+GTNI TP AP
Sbjct: 116 KRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 175
Query: 694 VPQIFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQAL 873
P NG+ GN NG+ +SG GRG + P E ++ L
Sbjct: 176 AP---NGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDL 232
Query: 874 DADLDKYHSEAMQIN 918
DADL+KYH+EAMQ+N
Sbjct: 233 DADLEKYHAEAMQLN 247
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 242 bits (618), Expect = 2e-61
Identities = 132/253 (52%), Positives = 161/253 (63%), Gaps = 6/253 (2%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+A+DMSLDD+IK NR+ NR APYAT KA
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFP-----NRAANRAAPYATAKA 55
Query: 358 PDAMWQHDMYSNQMAAVAT------RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDL 519
P+A WQHD+Y++Q A A RA SIETGTKLYISNL+YGVS++DIKELF+EVGDL
Sbjct: 56 PEATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDL 115
Query: 520 KRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVP 699
KR+++HYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTNI TP P
Sbjct: 116 KRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 175
Query: 700 QIFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDA 879
NG+ GN +G+ +SG GRG + P E ++ LDA
Sbjct: 176 -ARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDA 234
Query: 880 DLDKYHSEAMQIN 918
DL+KYH+EAMQ+N
Sbjct: 235 DLEKYHAEAMQLN 247
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 240 bits (612), Expect = 1e-60
Identities = 133/252 (52%), Positives = 163/252 (64%), Gaps = 5/252 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+ALDM+LDD+IK NR+GNRPAPYA KA
Sbjct: 1 MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLP-----NRAGNRPAPYAAAKA 55
Query: 358 PDAMWQHDMYSNQMAAVAT-----RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLK 522
P++ WQHDMY++Q A A RA SIETGTKLYISNL+YGVSN+DIKELF EVGDLK
Sbjct: 56 PESAWQHDMYADQGVATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLK 115
Query: 523 RYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQ 702
R+++HYD+SGRSKGTAEV F+RR DA AA+KRY+NVQLDGKPM +EI+GTNI T A VP
Sbjct: 116 RHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVPP 175
Query: 703 IFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDAD 882
+ NG+FGNS G +SG GR S + E ++ + LDA+
Sbjct: 176 V-NGTFGNSGGPPRSGQGR-SGLLGRPRGAPRGRGSSRRGRGGRGRDRDEKVSAEDLDAE 233
Query: 883 LDKYHSEAMQIN 918
L+KYH+EAMQ+N
Sbjct: 234 LEKYHAEAMQLN 245
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 237 bits (604), Expect = 1e-59
Identities = 133/250 (53%), Positives = 155/250 (62%), Gaps = 3/250 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MSSAL+MSLDDLIK NR NR PY KA
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFP-----NRGANRSGPYTAAKA 55
Query: 358 PDAMWQHDMYSNQMAAV---ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 528
P+ WQHDMYS++ AA A RA +IETGTKLYISNL+YGVSN+DIKELF+EVGDLKR+
Sbjct: 56 PETTWQHDMYSDKGAAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRF 115
Query: 529 SIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIF 708
+IHYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTN+ TP P
Sbjct: 116 TIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPG-APSAG 174
Query: 709 NGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADLD 888
NG+FGNSNG + G GRG E ++ + LDA+L+
Sbjct: 175 NGAFGNSNGAPRGGHGRGGGF---GKQRGGGGGRGFGRGRGRGKGRGEKVSAEDLDAELE 231
Query: 889 KYHSEAMQIN 918
KYHSEAMQ N
Sbjct: 232 KYHSEAMQTN 241
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 236 bits (603), Expect = 1e-59
Identities = 130/250 (52%), Positives = 159/250 (63%), Gaps = 3/250 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+ALDM+L+D+IK NR+ NR APYA KA
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLP-----NRAANRAAPYAAAKA 55
Query: 358 PDAMWQHDMYSNQMAAVAT---RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 528
P+ W+HDMY+NQ A A RA SIETGTKLYISNL+YGVSN+DIKELF EVGD+KR+
Sbjct: 56 PETAWKHDMYANQPVAAAYPGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKRH 115
Query: 529 SIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIF 708
++HYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM +EI+GTNI T A P +
Sbjct: 116 TVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAV- 174
Query: 709 NGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADLD 888
NG+FGN G+ +SG GR S P E ++ + LDADL+
Sbjct: 175 NGTFGNPTGVPRSGQGRSGSLGRP-RGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLE 233
Query: 889 KYHSEAMQIN 918
KYH+EAMQ+N
Sbjct: 234 KYHAEAMQLN 243
>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 235 bits (599), Expect = 4e-59
Identities = 144/288 (50%), Positives = 162/288 (56%), Gaps = 41/288 (14%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+ALDMSLDDLIK NR NR PY+ KA
Sbjct: 1 MSNALDMSLDDLIK----NNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKA 56
Query: 358 PDAMWQHDMYSNQMAAV---ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 528
P+ WQHDM+++Q AA A R +IETGTKLYISNL+YGVSNEDIKELFSEVGDLKRY
Sbjct: 57 PETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRY 116
Query: 529 SIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIF 708
SIHYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTNI TPA VP +
Sbjct: 117 SIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVT 176
Query: 709 NGSFGNSNG-----------ISKSGP---------------------------GRGSSTV 774
NG+FGNSNG KS P GRG S
Sbjct: 177 NGTFGNSNGGLRRLRGELVHRVKSXPTYFHPSWNALLLVKFGVSWITGLACAQGRGGSQG 236
Query: 775 WPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADLDKYHSEAMQIN 918
P E ++ + LDADL+KYHSEAMQIN
Sbjct: 237 RP---RGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 281
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 234 bits (598), Expect = 5e-59
Identities = 134/249 (53%), Positives = 156/249 (62%), Gaps = 4/249 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MSSALDMSLDD+IK NR NR APY T KA
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIP-----NRGANRVAPYTTAKA 55
Query: 358 PDAMWQHDMYSNQMAAV----ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 525
P+ WQHDM+++Q++A A RA +IETGTKLYISNL+YGVSNEDIKELFSEVGDLKR
Sbjct: 56 PETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115
Query: 526 YSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQI 705
YSIHYD+SGRSKGTAEV ++RR DA AA+KRYNNVQLDGKPM IEI+GTNI T P
Sbjct: 116 YSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAPAA 175
Query: 706 FNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADL 885
N +FGNSNG+ + G GRG + E I+ + LDADL
Sbjct: 176 -NVNFGNSNGVPRGGQGRGGA-FRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADL 233
Query: 886 DKYHSEAMQ 912
DKY+SEA +
Sbjct: 234 DKYYSEASE 242
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 232 bits (592), Expect = 2e-58
Identities = 133/249 (53%), Positives = 155/249 (62%), Gaps = 4/249 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MSSALDMSLDD+IK NR NR APY T KA
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIP-----NRGANRVAPYTTAKA 55
Query: 358 PDAMWQHDMYSNQMAAV----ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 525
P+ WQHDM+++Q++A A RA +IETGTKLYISNL+YGVSNEDIKELFSEVGDLKR
Sbjct: 56 PETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115
Query: 526 YSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQI 705
YSIHYD+SGRSKGTAEV ++RR DA AA+KRYN VQLDGKPM IEI+GTNI T P
Sbjct: 116 YSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAAPAA 175
Query: 706 FNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADL 885
N +FGNSNG+ + G GRG + E I+ + LDADL
Sbjct: 176 -NVNFGNSNGVPRGGQGRGGA-FRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADL 233
Query: 886 DKYHSEAMQ 912
DKY+SEA +
Sbjct: 234 DKYYSEASE 242
>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 257
Score = 231 bits (589), Expect = 5e-58
Identities = 129/264 (48%), Positives = 159/264 (60%), Gaps = 17/264 (6%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
MS+ALDM+L+D+IK NR N APY+ KA
Sbjct: 1 MSAALDMTLEDIIKNNKKSGSGNPRGRSRPGPGPARRLP------NRVSNHAAPYSAAKA 54
Query: 358 PDAMWQHDMYSNQMAAVAT------RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDL 519
P+ WQHD+Y++Q A A RAPSIETGTKLYISNL+Y VSN+DIKELFSEVGDL
Sbjct: 55 PETTWQHDLYADQPVAAAAYSAQGGRAPSIETGTKLYISNLDYAVSNDDIKELFSEVGDL 114
Query: 520 KRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVP 699
KR+ +HYD+SGRSKGTAEV F+RR+DA AA+KRYNNVQLDGKPM IEI+GTNI TP P
Sbjct: 115 KRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 174
Query: 700 QIFNGSFGNSNGISKSGPGRGSSTVWP-----------XXXXXXXXXXXXXXXXXXXXXX 846
+ NG+ GN NGI +SG GRG + P
Sbjct: 175 AV-NGAIGNFNGIPQSGQGRGGALRGPGGRGQGIRRNQGRGRGSGGGRGGGRGGGRGGGR 233
Query: 847 XEPITTQALDADLDKYHSEAMQIN 918
+ ++ + LDA+L++YH+EAMQIN
Sbjct: 234 DQKVSAEDLDAELERYHAEAMQIN 257
>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
Length = 252
Score = 229 bits (583), Expect = 3e-57
Identities = 130/256 (50%), Positives = 154/256 (60%), Gaps = 11/256 (4%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
M L+MSLDDLIK NR+ NR PYA KA
Sbjct: 1 MQDPLNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLP-----NRAANRTTPYAAAKA 55
Query: 358 PDAMWQHDMYSNQMAAV----ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 525
P+ WQHD+Y++Q AA A RA +IETGTKLYISNL+YGVSNEDIKELFSEVGDLKR
Sbjct: 56 PETAWQHDLYTDQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115
Query: 526 YSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPA---PV 696
Y +HYD+SGRSKGTAEV F+RR DA AA+KRYNNVQLDGKPM IEI+GTNI TP +
Sbjct: 116 YGVHYDRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTL 175
Query: 697 PQIFNGSFGNSNGISKSGPGRGSS----TVWPXXXXXXXXXXXXXXXXXXXXXXXEPITT 864
P NG+FGNSNG+ + G RG + E ++
Sbjct: 176 PPAANGNFGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSA 235
Query: 865 QALDADLDKYHSEAMQ 912
+ LDA+L+KYH+EAMQ
Sbjct: 236 EDLDAELEKYHAEAMQ 251
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 228 bits (580), Expect = 6e-57
Identities = 128/249 (51%), Positives = 151/249 (60%), Gaps = 4/249 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATG-K 354
M++ LDMSLDDLIK NR+ NR APY+ +
Sbjct: 1 MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFP------NRAANRTAPYSKPVQ 54
Query: 355 APDAMWQHDMYSNQMA---AVATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 525
APD WQHDM+ + A + A RA SIETGTKLYISNL+YGVSNEDIKELFSEVGD+KR
Sbjct: 55 APDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKR 114
Query: 526 YSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQI 705
YS+HYD+SGRSKGTAEV F+RR DA A KRYN VQLDGKPM IEI+GTN+ TP +P
Sbjct: 115 YSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPA 174
Query: 706 FNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADL 885
NG F N NG+ +SG GRGS + E ++ + LDADL
Sbjct: 175 TNGKFANPNGVPRSGQGRGSFS-----GRSRGPGRGARRGRGQGRGQGEKVSAEDLDADL 229
Query: 886 DKYHSEAMQ 912
+ YH EAMQ
Sbjct: 230 ENYHKEAMQ 238
>ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
gi|355507709|gb|AES88851.1| THO complex subunit
[Medicago truncatula]
Length = 376
Score = 228 bits (580), Expect = 6e-57
Identities = 120/220 (54%), Positives = 145/220 (65%), Gaps = 18/220 (8%)
Frame = +1
Query: 313 NRSGNRPAPYATGKAPDAMWQHDMYSNQMAAVAT-------RAPSIETGTKLYISNLEYG 471
NR+GNR APY+ KAP+ WQHD+Y++Q A A RAPSIETGTKLYISNL+YG
Sbjct: 158 NRAGNRAAPYSAAKAPETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYG 217
Query: 472 VSNEDIKELFSEVGDLKRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPM 651
VSN+DIKELFSEVGDLKR+ +HYD+SGRSKGTAEV F+RR+DA AA+KRYNNVQLDGKPM
Sbjct: 218 VSNDDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPM 277
Query: 652 HIEIIGTNIVTPAPVPQIFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXX 831
IEI+GTNI TP P + N GN NGI +SG GR P
Sbjct: 278 KIEIVGTNISTPGAAP-VVNAPIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRGS 336
Query: 832 XXXXXX-----------EPITTQALDADLDKYHSEAMQIN 918
+ ++ + LDA+L+KYH+EAMQ+N
Sbjct: 337 GGPRGGGRGGGRGRGRDDKVSAEDLDAELEKYHAEAMQLN 376
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 226 bits (577), Expect = 1e-56
Identities = 129/250 (51%), Positives = 152/250 (60%), Gaps = 3/250 (1%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
M+ LDMSLDD+IK NR NR PY+T KA
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFR----NRGLNRATPYSTSKA 56
Query: 358 PDAMWQHDMYSNQMAAVAT---RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 528
P+ W HDM+ + AA + RA +IETGTKLY+SNL+YGVSNEDIKELFSEVGD+KRY
Sbjct: 57 PETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRY 116
Query: 529 SIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIF 708
SI+YDKSGRSKGTAE+ F+R+ DA AA+KRYNNVQLDGKPM +EI+GTNIVTPA VP
Sbjct: 117 SINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA-VPAPS 175
Query: 709 NGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADLD 888
N SFGN NG + G G + E ++ + LDADLD
Sbjct: 176 NASFGNPNGFPRGGRAMGRN--------RGGGRGRSGSGSGSGRGHGEKLSAEDLDADLD 227
Query: 889 KYHSEAMQIN 918
KYH EAMQIN
Sbjct: 228 KYHEEAMQIN 237
>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 224 bits (572), Expect = 5e-56
Identities = 132/264 (50%), Positives = 154/264 (58%), Gaps = 17/264 (6%)
Frame = +1
Query: 178 MSSALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKA 357
M+ LDMSLDD+IK NR NR PY+T KA
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGPSRRFR----NRGLNRATPYSTSKA 56
Query: 358 PDAMWQHDMYSNQMAAVAT---RAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY 528
P+ W HDM+ + AA + RA +IETGTKLY+SNL+YGVSNEDIKELFSEVGD+KRY
Sbjct: 57 PETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRY 116
Query: 529 SIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIF 708
SI+YDKSGRSKGTAE+ F+R+ DA AA+KRYNNVQLDGKPM +EI+GTNIVTPA VP
Sbjct: 117 SINYDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA-VPAPS 175
Query: 709 NGSFGNSNGISKSG--------------PGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXX 846
N SFGN NG + G PGRG
Sbjct: 176 NASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGR-----------GRGSGSGSGSGRGH 224
Query: 847 XEPITTQALDADLDKYHSEAMQIN 918
E ++ + LDADLDKYH EAMQIN
Sbjct: 225 GEKLSAEDLDADLDKYHEEAMQIN 248
>ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solanum lycopersicum]
Length = 251
Score = 221 bits (562), Expect = 7e-55
Identities = 127/251 (50%), Positives = 149/251 (59%), Gaps = 6/251 (2%)
Frame = +1
Query: 184 SALDMSLDDLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSGNRPAPYATGKAPD 363
+ALDM+LDDLIK NRS NR APY+ KAP
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGRGAASTSSAGPSRRVP-NRSANRAAPYSIAKAPQ 62
Query: 364 AMWQHDMYSNQMAAV----ATRAPSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYS 531
A W HDM+ A RA SIETGTKLYISNL+YGVSNEDIKELFSE+GDLKRY+
Sbjct: 63 ASWNHDMFEADQAVAFGQAGGRASSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKRYA 122
Query: 532 IHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIEIIGTNIVTPAPVPQIFN 711
+HYD+SGRSKGTAEV F+RR+DA A +KR+NNVQLDGKPM IEI+GTNIVT P N
Sbjct: 123 VHYDRSGRSKGTAEVVFSRRQDALAGVKRFNNVQLDGKPMKIEIVGTNIVT--PTAPFSN 180
Query: 712 GS--FGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXXXXXXXXEPITTQALDADL 885
G+ FG++NG +SG RG E ++ + LDADL
Sbjct: 181 GAFGFGDTNGAPRSGQVRGGGFGRSRGGRGRDRGFRGGNRGWGRGGRGEKVSAEDLDADL 240
Query: 886 DKYHSEAMQIN 918
KYH+EAMQ N
Sbjct: 241 MKYHTEAMQTN 251
>ref|XP_004294581.1| PREDICTED: THO complex subunit 4-A-like [Fragaria vesca subsp.
vesca]
Length = 250
Score = 219 bits (557), Expect = 3e-54
Identities = 117/205 (57%), Positives = 142/205 (69%), Gaps = 7/205 (3%)
Frame = +1
Query: 313 NRSGNRPAPYATGKAPDAMWQHDMYSNQ----MAAVATRAPSIETGTKLYISNLEYGVSN 480
NR+GNR PY KAP++ WQHDM+++Q AA A RA +IETGTKLYISNL+YGVSN
Sbjct: 42 NRAGNRATPYGGAKAPESTWQHDMFADQGAAYSAAPAGRASAIETGTKLYISNLDYGVSN 101
Query: 481 EDIKELFSEVGDLKRYSIHYDKSGRSKGTAEVFFTRREDAYAAMKRYNNVQLDGKPMHIE 660
EDIKELF EVGDLKRY +HYD+SGRSKGTA+V F+RR+DA AA+KRYNNV LDGKPM IE
Sbjct: 102 EDIKELFVEVGDLKRYGVHYDRSGRSKGTADVVFSRRQDAVAAVKRYNNVMLDGKPMKIE 161
Query: 661 IIGTNIVTP-AP--VPQIFNGSFGNSNGISKSGPGRGSSTVWPXXXXXXXXXXXXXXXXX 831
I+GTNI TP AP +P NG+F NSNG + G GRG + P
Sbjct: 162 IVGTNISTPGAPLALPPAANGAFRNSNGAPRGGQGRGGAFNRP-RGGAGRGPRRGRGGRG 220
Query: 832 XXXXXXEPITTQALDADLDKYHSEA 906
E ++ + LDA+L+KYH+ A
Sbjct: 221 RGGRTGEKVSAEDLDAELEKYHATA 245