BLASTX nr result
ID: Stemona21_contig00004083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00004083
(872 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su... 246 1e-62
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 245 2e-62
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 245 2e-62
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 244 2e-62
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps... 244 3e-62
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 243 5e-62
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [... 243 5e-62
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus... 243 7e-62
gb|AFK35928.1| unknown [Lotus japonicus] 243 7e-62
ref|XP_006847979.1| hypothetical protein AMTR_s00029p00159420 [A... 242 1e-61
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 241 2e-61
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop... 241 3e-61
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g... 241 3e-61
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 241 3e-61
ref|XP_004141497.1| PREDICTED: DNA-directed RNA polymerase II su... 240 4e-61
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su... 240 6e-61
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su... 240 6e-61
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 240 6e-61
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 240 6e-61
gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A... 239 7e-61
>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus] gi|449526195|ref|XP_004170099.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB4-like [Cucumis sativus]
Length = 138
Score = 246 bits (627), Expect = 1e-62
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQMS+DPTNQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVRE+LSR QLAEFELCVLGNLCPETVEEAIAMVPSLKTKGR +
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 245 bits (625), Expect = 2e-62
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGD+FLKAKCLMNCEV+LIL+ KYEQ QQMSDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR QLAEFELCVLGNLCPETVEEAIAMVPS+KTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 245 bits (625), Expect = 2e-62
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEV++IL+ KYEQ QQMSDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR QLAEFELCVLGNLCPETVEEAIAMVPS+KTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum]
Length = 138
Score = 244 bits (624), Expect = 2e-62
Identities = 123/138 (89%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLILD KYEQ QQ SDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREIL+R QLAEFELCVLGNLCPETVEEAIAMVPS+KT+GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
gi|482557570|gb|EOA21762.1| hypothetical protein
CARUB_v10002229mg [Capsella rubella]
Length = 138
Score = 244 bits (623), Expect = 3e-62
Identities = 121/138 (87%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ+S+DP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPSLKTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
DDAIEKML+DLSL+K+FE
Sbjct: 121 DDAIEKMLNDLSLVKRFE 138
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 243 bits (621), Expect = 5e-62
Identities = 122/138 (88%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEV++ILD KYEQ QQ SDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR QLAEFELCVLGNLCPETVEEAIAMVPS+KT+GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 243 bits (621), Expect = 5e-62
Identities = 122/138 (88%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIG+EFLKAKCLMNCEV+LIL+ KYEQ QQMS+DP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR QLAEFELCVLGNLCPETVEEAIAMVPS+KTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
DDAIE+ML+DLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138
>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 243 bits (620), Expect = 7e-62
Identities = 122/138 (88%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ SDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREIL+R QLAEFELCVLGNLCPETVEEAIAMVPS+KT+GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 243 bits (620), Expect = 7e-62
Identities = 122/138 (88%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ SDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREIL+R QLAEFELCVLGNLCPETVEEAIAMVPS+KT+GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006847979.1| hypothetical protein AMTR_s00029p00159420 [Amborella trichopoda]
gi|548851284|gb|ERN09560.1| hypothetical protein
AMTR_s00029p00159420 [Amborella trichopoda]
Length = 139
Score = 242 bits (618), Expect = 1e-61
Identities = 122/139 (87%), Positives = 133/139 (95%), Gaps = 1/139 (0%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIG+EFLKAKCLMNCEV+LILD KYEQ QQMSDDP+NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRA-L 418
YVKRFSRYKNPDAVRQVRE+LSRNQLAEFELCVLGNLCPETVEEAIAMVPS+K KGR+
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRNQLAEFELCVLGNLCPETVEEAIAMVPSIKAKGRSNN 120
Query: 417 EDDAIEKMLHDLSLIKKFE 361
+DDAIEKML+DL+LIKKFE
Sbjct: 121 DDDAIEKMLNDLALIKKFE 139
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
Length = 138
Score = 241 bits (616), Expect = 2e-61
Identities = 121/138 (87%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ SDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREIL+R QLAEFELCVLGNLCPETVEEAIAMVPS+K++GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
Full=DNA-directed RNA polymerase II subunit 4; AltName:
Full=15.9 kDa subunit of RNA polymerase II; AltName:
Full=DNA-directed RNA polymerase II subunit D
gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
[Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
polymerase II, Rpb4, core protein [Arabidopsis thaliana]
Length = 138
Score = 241 bits (615), Expect = 3e-61
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ K+EQ QQ+S+DP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPSLKTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138
>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
subsp. lyrata]
Length = 138
Score = 241 bits (615), Expect = 3e-61
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ K+EQ QQ+S+DP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQVSEDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPSLKTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 241 bits (615), Expect = 3e-61
Identities = 121/138 (87%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENA+ELKIGDEFLKAKCLMNCEV+LIL+ KYEQ QQMS+DP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR QLAEFELCVLGNLCPETVEEAIAMVPS+KTKGRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML DLS+IKKFE
Sbjct: 121 DEAIEKMLTDLSMIKKFE 138
>ref|XP_004141497.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus]
Length = 138
Score = 240 bits (613), Expect = 4e-61
Identities = 121/138 (87%), Positives = 130/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ ++DPTNQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQRAEDPTNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREILSR QLAEFELCVLGNLCPETVEEA ++VPSLKTKGR E
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEATSIVPSLKTKGRVHE 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
tuberosum]
Length = 138
Score = 240 bits (612), Expect = 6e-61
Identities = 120/138 (86%), Positives = 129/138 (93%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEV+LIL+ KYEQ QQMSDDPTNQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQ REILSR LAEFELCVLGNLCPETVEE IAMVPS+K +GRAL+
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
++AIEKML DLSLIKKFE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138
>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Solanum lycopersicum]
Length = 138
Score = 240 bits (612), Expect = 6e-61
Identities = 120/138 (86%), Positives = 129/138 (93%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEV+LIL+ KYEQ QQMSDDPTNQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQ REILSR LAEFELCVLGNLCPETVEE IAMVPS+K +GRAL+
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
++AIEKML DLSLIKKFE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 240 bits (612), Expect = 6e-61
Identities = 121/138 (87%), Positives = 130/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ SDD NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREIL+R QLAEFELCVLGNLCPETVEEAIAMVPS+KT+GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 240 bits (612), Expect = 6e-61
Identities = 120/138 (86%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLIL+ KYEQ QQ SDDP NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVREIL+R QLAEFELCVLGNLCPETVEEAIA+VPS+K++GRA +
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
Length = 138
Score = 239 bits (611), Expect = 7e-61
Identities = 119/138 (86%), Positives = 131/138 (94%)
Frame = -3
Query: 774 MSLEEEENAAELKIGDEFLKAKCLMNCEVSLILDRKYEQFQQMSDDPTNQMSQVFEKSMQ 595
MS EEEENAAELKIGDEFLKAKCLMNCEVSLILD K EQ Q MSDDP+NQ+SQVFEKS+Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKLEQLQAMSDDPSNQVSQVFEKSLQ 60
Query: 594 YVKRFSRYKNPDAVRQVREILSRNQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRALE 415
YVKRFSRYKNPDAVRQVRE+LSR+QLAEFELCVLGNLCPETVEEAIAMVPS+K++GR +
Sbjct: 61 YVKRFSRYKNPDAVRQVRELLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHD 120
Query: 414 DDAIEKMLHDLSLIKKFE 361
D+AIEKML+D+SLIKKFE
Sbjct: 121 DEAIEKMLNDMSLIKKFE 138