BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00003995
         (566 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT04706.1| Splicing factor 3B subunit 4 [Aegilops tauschii]        61   2e-07
gb|AFW78073.1| hypothetical protein ZEAMMB73_201613 [Zea mays]         59   1e-06
gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]     59   1e-06
gb|ACG25819.1| RNA recognition motif-containing protein [Zea may...    59   1e-06
gb|ACG24416.1| RNA recognition motif-containing protein [Zea may...    59   1e-06
gb|EMS45880.1| Splicing factor 3B subunit 4 [Triticum urartu]          57   2e-06
ref|XP_004962002.1| PREDICTED: spliceosome-associated protein 49...    57   4e-06
ref|XP_004962001.1| PREDICTED: spliceosome-associated protein 49...    57   4e-06
gb|ACG25921.1| RNA recognition motif-containing protein [Zea mays]     56   5e-06

>gb|EMT04706.1| Splicing factor 3B subunit 4 [Aegilops tauschii]
          Length = 227

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -3

Query: 555 VSAQRLVNCRTSAGHHSISP-----VYPQASSGELINRGLRNNNVEYSRRVLGAMINDVS 391
           VS  R+VN R +   H +SP      + QASSG + +RGL +   EYSRRV G+++NDVS
Sbjct: 158 VSQHRVVNGRIAG--HGVSPNHSYDFHSQASSG-VASRGLNDGTYEYSRRVFGSVMNDVS 214

Query: 390 RPGSRNPIAYPSY 352
           R   R P+ YPSY
Sbjct: 215 RRADRQPVPYPSY 227


>gb|AFW78073.1| hypothetical protein ZEAMMB73_201613 [Zea mays]
          Length = 78

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -3

Query: 492 YPQASSGELINRGLRNNNVEYSRRVLGAMINDVSRPGSRNPIAYPSY 352
           + QA S  L NRGL N   EYSRRV G+++NDVSR  +R PI YPSY
Sbjct: 32  HTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 78


>gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]
          Length = 190

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -3

Query: 492 YPQASSGELINRGLRNNNVEYSRRVLGAMINDVSRPGSRNPIAYPSY 352
           + QA S  L NRGL N   EYSRRV G+++NDVSR  +R PI YPSY
Sbjct: 144 HTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 190


>gb|ACG25819.1| RNA recognition motif-containing protein [Zea mays]
           gi|413945428|gb|AFW78077.1| RNA recognition motif
           protein-containing protein [Zea mays]
          Length = 137

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -3

Query: 492 YPQASSGELINRGLRNNNVEYSRRVLGAMINDVSRPGSRNPIAYPSY 352
           + QA S  L NRGL N   EYSRRV G+++NDVSR  +R PI YPSY
Sbjct: 91  HTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 137


>gb|ACG24416.1| RNA recognition motif-containing protein [Zea mays]
           gi|223944379|gb|ACN26273.1| unknown [Zea mays]
           gi|413945426|gb|AFW78075.1| RNA recognition motif
           protein-containing protein [Zea mays]
          Length = 190

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -3

Query: 492 YPQASSGELINRGLRNNNVEYSRRVLGAMINDVSRPGSRNPIAYPSY 352
           + QA S  L NRGL N   EYSRRV G+++NDVSR  +R PI YPSY
Sbjct: 144 HTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 190


>gb|EMS45880.1| Splicing factor 3B subunit 4 [Triticum urartu]
          Length = 222

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -3

Query: 555 VSAQRLVNCRTSAGHHSISP-----VYPQASSGELINRGLRNNNVEYSRRVLGAMINDVS 391
           VS  R+VN R +   + +SP      + QASSG + +RGL +   +YSRRV G+++NDVS
Sbjct: 153 VSQHRVVNGRIAG--YGVSPNHSYDFHSQASSG-VASRGLSDGTYDYSRRVFGSVLNDVS 209

Query: 390 RPGSRNPIAYPSY 352
           R   R P+ YPSY
Sbjct: 210 RRADRQPVPYPSY 222


>ref|XP_004962002.1| PREDICTED: spliceosome-associated protein 49-like isoform X2
           [Setaria italica]
          Length = 140

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
 Frame = -3

Query: 552 SAQRLVNCRTSAGHHSISP-----VYPQASSGELINRGLRNNNVEYSRRVLGAMINDVSR 388
           S   +VN R +   + ISP      + QA S  L +RGL N   EYSRRV G+++NDVSR
Sbjct: 71  SQHTVVNGRIAG--YGISPNHSYDSHSQAPSSGLPSRGLSNGTYEYSRRVFGSVMNDVSR 128

Query: 387 PGSRNPIAYPSY 352
             +R P+ YPSY
Sbjct: 129 RATREPVPYPSY 140


>ref|XP_004962001.1| PREDICTED: spliceosome-associated protein 49-like isoform X1
           [Setaria italica]
          Length = 193

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
 Frame = -3

Query: 552 SAQRLVNCRTSAGHHSISP-----VYPQASSGELINRGLRNNNVEYSRRVLGAMINDVSR 388
           S   +VN R +   + ISP      + QA S  L +RGL N   EYSRRV G+++NDVSR
Sbjct: 124 SQHTVVNGRIAG--YGISPNHSYDSHSQAPSSGLPSRGLSNGTYEYSRRVFGSVMNDVSR 181

Query: 387 PGSRNPIAYPSY 352
             +R P+ YPSY
Sbjct: 182 RATREPVPYPSY 193


>gb|ACG25921.1| RNA recognition motif-containing protein [Zea mays]
          Length = 138

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = -3

Query: 492 YPQASSGELINRGLRNNNVEYSRRVLGAMINDVSRPGSRNPIAYPS 355
           Y QA S  L +RGL N   EYSRRV G+++NDVSR  +R PI YPS
Sbjct: 92  YTQAPSSGLPSRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPS 137