BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00003926
         (3181 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   257   e-116
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             241   e-108
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617...   225   3e-91
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               221   3e-90
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   237   4e-89
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   241   2e-88
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   238   3e-88
emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group] g...   199   1e-79
emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]           199   1e-79
emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa Japonica Group]         209   2e-79
gb|ABA97957.1| retrotransposon protein, putative, Ty3-gypsy subc...   206   1e-78
gb|ABA95343.1| retrotransposon protein, putative, Ty3-gypsy subc...   205   1e-78
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   220   1e-78
emb|CAD39529.2| OSJNBa0027O01.4 [Oryza sativa Japonica Group]         204   2e-78
emb|CAH66045.1| OSIGBa0107A02.6 [Oryza sativa Indica Group]           206   2e-78
emb|CAH66866.1| H0307D04.11 [Oryza sativa Indica Group]               204   2e-78
emb|CAE03508.2| OSJNBa0053K19.16 [Oryza sativa Japonica Group]        205   3e-78
emb|CAH66795.1| H0215F08.6 [Oryza sativa Indica Group]                203   4e-78
emb|CAE02298.2| OSJNBa0042F21.5 [Oryza sativa Japonica Group]         202   5e-78
gb|ABA97627.1| retrotransposon protein, putative, Ty3-gypsy subc...   204   6e-78

>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  257 bits (656), Expect(3) = e-116
 Identities = 141/307 (45%), Positives = 192/307 (62%), Gaps = 1/307 (0%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P L   +AV S ++L +++     +  VRG Q +AR CY + V                 
Sbjct: 660  PFLRMSKAVLSNHYLALKYRVNGIVGVVRGGQRIARGCYSSAV----------------- 702

Query: 2240 RQYMQVTEV-SRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMECLRN 2416
            R+ MQ+T + +R +  K R    E+LE V L P+ P K + IG  L  + ++ L++CL+ 
Sbjct: 703  REAMQITSLDTRVENKKGRQEPVEDLETVSLGPENPGKTIRIGSRLEGEQKQELVKCLQA 762

Query: 2417 NLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLKISF 2596
            + D+FAW+++DMP +DPEV  HRL      + V+QK+R    ER + IN +VE+ L+  F
Sbjct: 763  HADVFAWTHEDMPGIDPEVACHRLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGF 822

Query: 2597 IRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLVDST 2776
            IR V YP W++N VLVKKA+GKW MCVDFTDLN                LP+IDQLVDST
Sbjct: 823  IREVSYPEWISNVVLVKKANGKWRMCVDFTDLN-------KACPKDSFPLPKIDQLVDST 875

Query: 2777 SGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLVNMM 2956
            +G+ LL+FMDAFSGYNQI M+  D+E TAFIT +GL+C+ VMPFGLKNAGATYQRLVN +
Sbjct: 876  AGHGLLSFMDAFSGYNQIPMYEPDEESTAFITNQGLFCYRVMPFGLKNAGATYQRLVNKV 935

Query: 2957 LKTSLAR 2977
             K  + +
Sbjct: 936  FKPLIGK 942



 Score =  109 bits (273), Expect(3) = e-116
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 10/227 (4%)
 Frame = +1

Query: 1303 LKAPIEQIFMEIKKDDLLRLPKPIKEP*SGPGVNKFYNYHQAKGHNTRDCYTLRKEIEKL 1482
            LK  +++++  IK   LL LP PI +  +     ++  +H   GH T +C  L+ ++E L
Sbjct: 403  LKMSLDEVYEAIKDRGLLHLPTPITKLPNRRDRGRYCKFHGTHGHTTAECRDLKTQVEDL 462

Query: 1483 IRRGYLKQYVADDQRPPAETTNQHPPVERE-------IQMIXXXXXXXXESSIARKRYMC 1641
            +R  YL +++ D   P   TT +     R        ++MI        +S+ +RK Y  
Sbjct: 463  VRNRYLDEFI-DGTFPMEATTGEGEQGGRNLRREQPAVRMIAGGPTLAGDSNRSRKNY-A 520

Query: 1642 QYRTYQRE---GQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSIRLGPPTDQTLLH 1812
            +Y    +E     P A+R R +++ I +T++D   +L+PH+D L++   +          
Sbjct: 521  RYAMTSKEVLFSTPAAKRARVRQVPIMWTDEDEEGILYPHEDALVIKATVASKE----FD 576

Query: 1813 RVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTGSEAMP*G 1953
            R+L+D+GSS D+LF    + MGI   +L  T T   GF G + +P G
Sbjct: 577  RILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLG 623



 Score =  105 bits (261), Expect(3) = e-116
 Identities = 44/74 (59%), Positives = 61/74 (82%)
 Frame = +1

Query: 2959 KDLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGY 3138
            K L+G T EVYVDDM+ KS   ++HV HL++ + ++R+Y ++LNPEKCAFG  +GKFLG+
Sbjct: 937  KPLIGKTMEVYVDDMITKSKVPKEHVRHLEETFELLRKYKMKLNPEKCAFGVESGKFLGF 996

Query: 3139 LITHRGIEANPEKI 3180
            +++HRGIEANPEKI
Sbjct: 997  MVSHRGIEANPEKI 1010


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  241 bits (614), Expect(4) = e-108
 Identities = 134/306 (43%), Positives = 178/306 (58%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P ++  +A+PSTYH  ++F T  GI  +R                      P++ A  P 
Sbjct: 710  PWIHQMQAIPSTYHQCVKFPTHNGIFTLRA---------------------PKE-AKTPS 747

Query: 2240 RQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMECLRNN 2419
            R Y + +E+ R              E V +    P + + +G  +S  +R  L+  L+ N
Sbjct: 748  RSY-EESELCR-------------TEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRN 793

Query: 2420 LDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLKISFI 2599
               FAWS +DM  +DP +  H LN DP  KPV+QK+RK  PER + +NE+VE+ LK   I
Sbjct: 794  SKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQI 853

Query: 2600 RPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLVDSTS 2779
              V YP W+ANPV+VKK +GKW +CVD+TDLN                LP ID+LV++TS
Sbjct: 854  IEVKYPEWLANPVVVKKKNGKWRVCVDYTDLN-------KACPKDSYPLPHIDRLVEATS 906

Query: 2780 GNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLVNMML 2959
            GN LL+FMDAFSGYNQI MH DD+EKT+F+T+RG YC+ VM FGLKNAGATYQR VN ML
Sbjct: 907  GNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKML 966

Query: 2960 KTSLAR 2977
               + R
Sbjct: 967  ADQIGR 972



 Score = 99.0 bits (245), Expect(4) = e-108
 Identities = 43/73 (58%), Positives = 56/73 (76%)
 Frame = +1

Query: 2962 DLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYL 3141
            D +G T EVY+DDMLVKS K EDHV HL + + V+  Y ++LNP KC FG  +G+FLGY+
Sbjct: 968  DQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSGEFLGYV 1027

Query: 3142 ITHRGIEANPEKI 3180
            +T RGIEANP++I
Sbjct: 1028 VTKRGIEANPKQI 1040



 Score = 63.2 bits (152), Expect(4) = e-108
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
 Frame = +2

Query: 761  DAITCRAFPLTLKGIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQ 940
            DA  C+ F   L G A  WFS+L+ NS+ S+  L+ SF+ H+  +   + + + L+ +SQ
Sbjct: 252  DAGRCQIFIEHLTGPAHNWFSRLKPNSIDSFHQLTSSFLKHYAPLIENQTSNADLWSISQ 311

Query: 941  KKDESIQDYVTRFTTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACT 1120
               ES++ +V RF   + ++    E   V                  + P ++ D L   
Sbjct: 312  GAKESLRSFVDRFKLVVTNITVPDEAAIVALRNAVWYDSRFRDDITLHAPSTLEDALHRA 371

Query: 1121 EVFLKVERINTARRELEKDEAVHKKKKDNAKRPASKDA------PPPKKQARDH 1264
              F+          ELE+++ +  +K ++ K PA KDA      P    + R H
Sbjct: 372  SRFI----------ELEEEKLILARKHNSTKTPACKDAVVIKVGPDDSNEPRQH 415



 Score = 63.2 bits (152), Expect(4) = e-108
 Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 43/234 (18%)
 Frame = +1

Query: 1381 P*SGPGVNKFYNYHQAKGHNTRDCYTLRKEIEKLIRRGYL-------------------- 1500
            P +GP    +  YH+++ H+T +C  L+  +    + G +                    
Sbjct: 451  PAAGP---MYCEYHKSRAHSTENCRFLQGLLMAKYKSGGITIECDRPPINNKNQRRNETT 507

Query: 1501 -KQYVADDQRPPAETTN---------------------QHPPVEREIQMIXXXXXXXXES 1614
             +QY+ D  +PP                            P V R++ +I        +S
Sbjct: 508  ARQYLNDQTKPPTPAEQGIITSADDPAAKRQRNGKAIAAEPVVVRQVHVIMGGLQNCSDS 567

Query: 1615 SIARKRYMCQYRTYQR-EGQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSIRLGPP 1791
              + K+Y  +              R   Q   I+FT+ D   L  PH+DPL+V + +   
Sbjct: 568  VRSIKQYRKKAEMVVAWPSSTSTTRNPNQSAPISFTDVDLEGLDTPHNDPLVVELIIS-- 625

Query: 1792 TDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTGSEAMP*G 1953
               + + RVL+D+GSS D++F     AM I   +++P   P  GF G   M  G
Sbjct: 626  --DSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPVSKPLAGFDGDFVMTIG 677


>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
          Length = 1100

 Score =  225 bits (574), Expect(3) = 3e-91
 Identities = 125/295 (42%), Positives = 175/295 (59%), Gaps = 1/295 (0%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P +   + V ST++L +++     +  V+G Q +AR CY    ++               
Sbjct: 424  PFMRISQCVVSTHYLPLKYRVNGVVGVVKGDQRMARSCYATAAKET-------------- 469

Query: 2240 RQYMQVTEV-SRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMECLRN 2416
               +QVT + +R    K R    E+LE+V +    P++ + IG  L   +R  L++CL++
Sbjct: 470  ---LQVTSLDNRGDSKKGRQEPVEKLEEVAVSKSNPSRVVKIGSGLVGAVRGKLVKCLQS 526

Query: 2417 NLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLKISF 2596
              D+FAWS++D P ++  V  H+L    + +PV+QK+R    ER + IN +VE+ LK  F
Sbjct: 527  RADIFAWSHEDTPGINRGVACHKLAIKKEARPVRQKRRCFNQERYEAINAEVEKLLKAGF 586

Query: 2597 IRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLVDST 2776
            IR   YP W++N VLVKKA+GKW MCVDFTDLN                LP IDQLVDST
Sbjct: 587  IREAKYPEWISNVVLVKKANGKWRMCVDFTDLN-------KACQKDSFPLPMIDQLVDST 639

Query: 2777 SGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQR 2941
            +G+ LL+F+DAFSGYNQI M   D+E T +IT  GL+C+ VMPFGLKNAGATYQR
Sbjct: 640  AGHSLLSFIDAFSGYNQIPMDEQDEENTTYITNMGLFCYRVMPFGLKNAGATYQR 694



 Score =  111 bits (278), Expect(3) = 3e-91
 Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 11/229 (4%)
 Frame = +1

Query: 1300 PLKAPIEQIFMEIKKDDLLRLPKPIKEP*SGPGVNKFYNYHQAKGHNTRDCYTLRKEIEK 1479
            PLK P+E+++  I+   LL  P PI +P      ++F  +H   GH    C  L+ ++E 
Sbjct: 165  PLKVPMEELYERIEARGLLYPPAPITKPAHRRDKSRFCKFHDTHGHTISQCRDLKIQVED 224

Query: 1480 LIRRGYLKQYVADDQRPPAET-----TNQHPPVERE---IQMIXXXXXXXXESSIARKRY 1635
            L+R  YL +YV D   P  E+           +ERE   I++I        +S+ ARK Y
Sbjct: 225  LVRNRYLDEYV-DGVSPVIESQYTRDEGAERGLEREQLTIRVIVGGPTVAGDSNRARKNY 283

Query: 1636 MCQYRTYQRE---GQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSIRLGPPTDQTL 1806
              +Y    +E     P A++ + +++ I +T+DD   +L+PH+D L++   +      T 
Sbjct: 284  -GRYAMTSKEVLFNLPAAEKAKMRQVPIMWTDDDEEGILYPHEDALVIKAMVA----GTE 338

Query: 1807 LHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTGSEAMP*G 1953
            L R+L++ GSS DI+F    D MGI   +L  T T   GF G    P G
Sbjct: 339  LRRILIEMGSSVDIVFKSTLDDMGIADLKLERTNTSLKGFGGGRLTPIG 387



 Score = 50.1 bits (118), Expect(3) = 3e-91
 Identities = 19/38 (50%), Positives = 29/38 (76%)
 Frame = +1

Query: 3028 DHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYL 3141
            DHV HL++ + ++R Y ++LNP+K AFG + GK LG+L
Sbjct: 695  DHVKHLEETFELLREYEMKLNPKKYAFGVSLGKLLGFL 732


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  221 bits (562), Expect(4) = 3e-90
 Identities = 126/324 (38%), Positives = 186/324 (57%), Gaps = 18/324 (5%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTG-IREVRGSQ*VARECYLA-----------------T 2185
            PS+N  +A+ ST HL M+F +  G I  V   Q  ARECY+A                 T
Sbjct: 736  PSINRLKAIVSTPHLAMKFPSVNGDIATVHIDQKTARECYVASLKVEPTRRLYTTSAERT 795

Query: 2186 VQQRARQNDPRQLAVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIG 2365
             ++R R  + R       R  + + ++  P+L   R  + E+L+ ++L      +   +G
Sbjct: 796  TERRGRSTERRSRGRESRRHLVALVDLD-PRLDDPRMEAGEDLQPIFLRDK--DRKTYMG 852

Query: 2366 CTLSDDLRRSLMECLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPE 2545
             +L  D R ++ + L  N DLFAW+  DMP V  +VITHRL+   + +P+ QKKRK   E
Sbjct: 853  TSLKPDDRETIGKTLTKNADLFAWTAADMPGVKSDVITHRLSVYTEARPIAQKKRKLGEE 912

Query: 2546 R*QFINEQVEQYLKISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXX 2725
            R +   E+ ++ ++  FI+   Y TW+AN V+VKK +GKW MCVD+TDLN          
Sbjct: 913  RRKAAREETDKLIQAGFIQKAHYTTWLANVVMVKKTNGKWRMCVDYTDLN-------KAC 965

Query: 2726 XXXXXXLPQIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMP 2905
                  LP ID+LVD  +G+++L+F+DA+SGYNQI+M+  D+EKTAF T+   + + VMP
Sbjct: 966  PKDSYPLPTIDRLVDGAAGHQILSFLDAYSGYNQIQMYHRDREKTAFRTDSDNFFYEVMP 1025

Query: 2906 FGLKNAGATYQRLVNMMLKTSLAR 2977
            FGLKNAGATYQRL++ +    + R
Sbjct: 1026 FGLKNAGATYQRLMDHVFHDMIGR 1049



 Score =  102 bits (253), Expect(4) = 3e-90
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +1

Query: 2962 DLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYL 3141
            D++G   EVYVDD++VKS   E HVS L++ +  +R+Y +RLNPEKCAFG   GKFLG++
Sbjct: 1045 DMIGRNVEVYVDDIVVKSDSCEQHVSDLKEVFQALRQYRMRLNPEKCAFGVEGGKFLGFM 1104

Query: 3142 ITHRGIEANPEK 3177
            +THRGIEANPEK
Sbjct: 1105 LTHRGIEANPEK 1116



 Score = 54.3 bits (129), Expect(4) = 3e-90
 Identities = 38/125 (30%), Positives = 62/125 (49%)
 Frame = +1

Query: 1555 PPVEREIQMIXXXXXXXXESSIARKRYMCQYRTYQREGQPRAQRPRTQEIAITFTEDDAR 1734
            PP  +EI  I         S+ ARK+++   ++      P  +RP    I  TFT++D  
Sbjct: 577  PP--QEINYIAGGFAGGGCSNSARKKHLRAIQSVH--STPTQRRPHIPPI--TFTDEDFT 630

Query: 1735 DLLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTP 1914
             +    DDP+++++ +    D+  + +VLVD GSS DIL+   F  M I    ++P    
Sbjct: 631  AIDPSQDDPMVITVEI----DKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQ 686

Query: 1915 FVGFT 1929
             VGF+
Sbjct: 687  IVGFS 691



 Score = 27.7 bits (60), Expect(4) = 3e-90
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 1950 GVIQLPLTLGTHPHIKTVDVLFYILDVPSVYNVILERP 2063
            G I L  T G     KT+++ + +++  + YN++L RP
Sbjct: 699  GFIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRP 736



 Score = 87.0 bits (214), Expect = 5e-14
 Identities = 66/289 (22%), Positives = 114/289 (39%)
 Frame = +2

Query: 437  HNSAPSPTPHQHSNLSSRPLAEDPFSLAQQVQEVKDRLGGVEDVVQGRAPINIEAMVRQV 616
            H+ APSP+P Q    +          +AQ +         V+   Q   P+    +    
Sbjct: 163  HSRAPSPSPFQSGTRT----------IAQAIPHTSL----VQHTRQSAKPVTPNEVANPK 208

Query: 617  ASSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTL 796
               F  +I A PLP K++  +   YD   DP  HL  F  QM LY     + C+ FP +L
Sbjct: 209  GHPFTDDIIATPLPDKWRGLTINLYDGSTDPDEHLNIFRTQMTLYTTDRTVWCKVFPTSL 268

Query: 797  KGIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTR 976
            +   L WFS L  NS+ S+  L   F T +      + ++  L  + Q++ ES++ ++ R
Sbjct: 269  REGPLGWFSDLPPNSIASFDALELKFTTQYATSRPHRTSSMSLLNVKQERGESLRTFMNR 328

Query: 977  FTTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTA 1156
            F+   +++ +    I +                    P +M +L      F+++E     
Sbjct: 329  FSKVCMNIRNLNPEIAMHHLVSAILPGRFTESLIKRPPCNMDELRTRATKFMQIEEHIDY 388

Query: 1157 RRELEKDEAVHKKKKDNAKRPASKDAPPPKKQARDHPKTRALKQRMQYL 1303
             R+   +   + K       P  ++   P +  R H  T  +  R + L
Sbjct: 389  HRKTYAENTDNSKGIRPPTIPTDRERHRPNRGPRFHNYTPLIVPRGKVL 437


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  237 bits (604), Expect(2) = 4e-89
 Identities = 130/324 (40%), Positives = 188/324 (58%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P +   + V ST++L +++     +  V+G Q +AR CY    ++               
Sbjct: 570  PFMRISQCVMSTHYLALKYRINGVVGVVKGDQRMARSCYATAAKET-------------- 615

Query: 2240 RQYMQVTEV-SRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMECLRN 2416
               +QVT + +R      R    E+LE+V +    P++ + +G  L  +++  L++CL++
Sbjct: 616  ---LQVTSLDNRGDSKNGRQEPVEKLEEVVVSRSDPSRVVKVGSELGREIKTELVKCLQS 672

Query: 2417 NLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLKISF 2596
            + D+FAWS++DMP +D  +  H+L      +PV+QK+R    +R + IN +VE+ LK  F
Sbjct: 673  HADIFAWSHEDMPGIDRRIACHKLAVKKGARPVRQKRRCFNHKRYETINAEVEKLLKAGF 732

Query: 2597 IRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLVDST 2776
            IR   YP W++N VLVKKA+GKW MCVDFTDLN                L +IDQLVDST
Sbjct: 733  IREAKYPEWISNVVLVKKANGKWRMCVDFTDLN-------KACPKDSFPLQKIDQLVDST 785

Query: 2777 SGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLVNMM 2956
            +G+ LL+FMDAFSGYNQI M+  D+E T FIT  GL+C+ VMPFGLKNAGATYQRLVN +
Sbjct: 786  AGHSLLSFMDAFSGYNQIPMNEQDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVNKV 845

Query: 2957 LKTSLARPRRYMWTTCWSKATRPR 3028
             K  +            +K+  PR
Sbjct: 846  FKPLIGHTMEVYVDDMITKSREPR 869



 Score =  121 bits (304), Expect(2) = 4e-89
 Identities = 80/229 (34%), Positives = 117/229 (51%), Gaps = 11/229 (4%)
 Frame = +1

Query: 1300 PLKAPIEQIFMEIKKDDLLRLPKPIKEP*SGPGVNKFYNYHQAKGHNTRDCYTLRKEIEK 1479
            PLK  IE+++  I+   LL  P PI +P      ++F  +H   GH    C  LR ++E 
Sbjct: 311  PLKISIEELYERIEGRGLLYTPAPITKPAHRRDKSRFCKFHNTHGHTISQCRDLRIQVED 370

Query: 1480 LIRRGYLKQYVADDQRPPAETTNQHPP-----VERE---IQMIXXXXXXXXESSIARKRY 1635
            L+R  YL +YV D   P +++   H       +ERE   IQ+I        +S+ ARK Y
Sbjct: 371  LVRNQYLDEYV-DGVSPVSQSQYAHDEGVERGLEREQPTIQVIAGRPTLAGDSNRARKNY 429

Query: 1636 MCQYRTYQRE---GQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSIRLGPPTDQTL 1806
              +Y    +E     P A+R + +++ I +TED+   +L+PH+D L++   +      T 
Sbjct: 430  -GRYALTSKEVLFNLPAAKRAKVRQVPIMWTEDEEEGILYPHEDALVIKALVA----STE 484

Query: 1807 LHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTGSEAMP*G 1953
            L R+LVD+GSS DILF  A D MGI   +L  T T   GF G    P G
Sbjct: 485  LRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMG 533



 Score = 67.0 bits (162), Expect = 5e-08
 Identities = 37/127 (29%), Positives = 57/127 (44%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            S    EI    +P  F+ P   KY    DP  H+  F D   + G + A  CR FPLTL+
Sbjct: 6    SPLSTEIMGTIIPRDFRFPDL-KYSGQSDPLVHIERFNDMTGVQGLTPAQRCRVFPLTLE 64

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
            G A  W+ +L    +  +  + +     F G    +     L  M Q++ ES+ D+V R+
Sbjct: 65   GRAREWYRKLPRGGIKGYEQMCQELAEQFRGAVAPEDDMMELMGMKQEEHESLHDFVKRY 124

Query: 980  TTEMLSV 1000
               +L +
Sbjct: 125  HRAVLDL 131



 Score = 63.2 bits (152), Expect = 7e-07
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = +1

Query: 2959 KDLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGY 3138
            K L+G T EVYVDDM+ KS +  DHV HL++ + +          +KCAFG  +GKFLGY
Sbjct: 847  KPLIGHTMEVYVDDMITKSREPRDHVKHLEETFEL----------QKCAFGVGSGKFLGY 896

Query: 3139 L 3141
            L
Sbjct: 897  L 897


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  241 bits (615), Expect(2) = 2e-88
 Identities = 133/324 (41%), Positives = 190/324 (58%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P +   + V ST++L +++     +  V+G Q +AR CY    ++               
Sbjct: 725  PFMRISQCVISTHYLALKYRINGVVGVVKGDQRMARSCYATAAKET-------------- 770

Query: 2240 RQYMQVTEV-SRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMECLRN 2416
               +QVT + +R      R    E+L++V +    P+K + +G  L + ++  L++CL++
Sbjct: 771  ---LQVTSLDNRGDSKNGRQEPVEKLKEVVVSRSDPSKVVKVGSELGEAIKGELVKCLQS 827

Query: 2417 NLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLKISF 2596
            + D+FAWS++DMP +D  +  H+L      +PV+QK+R    ER + IN +VE+ LK  F
Sbjct: 828  HADIFAWSHEDMPGIDRGIACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLKAGF 887

Query: 2597 IRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLVDST 2776
            IR   YP W++N VLVKKA+GKW MCVDFTDLN                LP+IDQLVDST
Sbjct: 888  IREAKYPEWISNVVLVKKANGKWRMCVDFTDLN-------KACPKDSFPLPKIDQLVDST 940

Query: 2777 SGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLVNMM 2956
            +G+ LL+FMDAFSGYNQI M+  D+E T FIT  GL+C+ VMPFGLKNAGATYQRLVN +
Sbjct: 941  AGHSLLSFMDAFSGYNQIPMNEQDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVNKV 1000

Query: 2957 LKTSLARPRRYMWTTCWSKATRPR 3028
             K  + R          +K+  PR
Sbjct: 1001 FKPLIGRTMEVYVDDMITKSREPR 1024



 Score =  115 bits (287), Expect(2) = 2e-88
 Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
 Frame = +1

Query: 1300 PLKAPIEQIFMEIKKDDLLRLPKPIKEP*SGPGVNKFYNYHQAKGHNTRDCYTLRKEIEK 1479
            PLK  +E+++  I+   LL  P PI +P      ++F  +H   GH    C  L+ ++E 
Sbjct: 466  PLKISMEELYERIEGRGLLYPPAPITKPTHRRDKSRFCKFHDTHGHTINQCRDLKTQVED 525

Query: 1480 LIRRGYLKQYVADDQRPPAETT-NQHPPVERE-------IQMIXXXXXXXXESSIARKRY 1635
            L+R  YL +YV D   P  E+   +   VER        +++I        +S+ ARK Y
Sbjct: 526  LVRNRYLDEYV-DGISPATESQYTRDEGVERSLEREQSTVRVIAGGPTLAGDSNRARKNY 584

Query: 1636 MCQYRTYQRE---GQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSIRLGPPTDQTL 1806
              +Y    +E     P A+R + +++ I +TE+D   +L+PH+D L++   +      T 
Sbjct: 585  -GRYALTSKEVLFNLPAAKRAKVRQVPIMWTENDEEGILYPHEDALVIKALVA----STE 639

Query: 1807 LHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTGSEAMP*G 1953
            L R+LVD+GSS DILF  A D MGI   +L  T T   GF G    P G
Sbjct: 640  LRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMG 688



 Score =  108 bits (270), Expect = 1e-20
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = +1

Query: 2959 KDLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGY 3138
            K L+G T EVYVDDM+ KS +  DHV HL++ + ++RRY ++LNPEKCAFG ++GKFLGY
Sbjct: 1002 KPLIGRTMEVYVDDMITKSREPRDHVKHLEETFELLRRYKMKLNPEKCAFGVSSGKFLGY 1061

Query: 3139 LITHRGIEANPEKI 3180
            L++HRGIEAN EKI
Sbjct: 1062 LVSHRGIEANLEKI 1075



 Score = 72.4 bits (176), Expect = 1e-09
 Identities = 63/259 (24%), Positives = 100/259 (38%), Gaps = 29/259 (11%)
 Frame = +2

Query: 311  VGALTEARARAPTKSPSYPE--TRVSPHHSWMLNESQTGESSPPH--NSAPSPTPHQHSN 478
            VGA    R R   + P Y +    V PH S       TG     H       P P +   
Sbjct: 40   VGAEPSLRGRRVGEIPPYGDQPNGVHPHRS-------TGRVPGEHVDEGRDQPRPGRTLE 92

Query: 479  LSSRPLAEDPFSLAQQVQEVKDRLGGVEDVVQGRAP---INIEAMVRQVA---------- 619
            ++ R  + D   L Q++Q  +       D +  R P   + +E  VR++A          
Sbjct: 93   INGRGASVDEGELRQRLQNAEQE----RDQIAARDPDRAVELEGEVRRLAQVIEEMQGKR 148

Query: 620  ------------SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSD 763
                        S    EI +  +P  F+ P   KY    DP  H+  F D   + G + 
Sbjct: 149  KPPSWRIMLDEESPLSTEIMSTIIPKDFRFPDL-KYSGRSDPLVHIERFNDMTGVQGLTP 207

Query: 764  AITCRAFPLTLKGIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQK 943
            A  CR  PLTL+G A  W+ +L    +  +  + +     F G    +     L  M Q+
Sbjct: 208  AQRCRVLPLTLEGRAREWYRKLPRGGIKGYEQICQELAEQFRGAVAPEDDMMELMGMRQE 267

Query: 944  KDESIQDYVTRFTTEMLSV 1000
            + ES++D++ R+   +L +
Sbjct: 268  EHESLRDFIKRYHRVVLDL 286


>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  238 bits (608), Expect(2) = 3e-88
 Identities = 131/324 (40%), Positives = 189/324 (58%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P +   + V ST++L +++     +  V+G Q +AR CY    ++               
Sbjct: 558  PFMRISQCVMSTHYLALKYRINGVVGVVKGDQRMARSCYATAAKET-------------- 603

Query: 2240 RQYMQVTEV-SRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMECLRN 2416
               +QVT + +R      R    E+LE+V +    P++ + +G  L + ++  L++CL++
Sbjct: 604  ---LQVTSLDNRGDSKNGRQEPVEKLEEVVISRSDPSRVVKVGSELGEAIKAELVKCLQS 660

Query: 2417 NLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLKISF 2596
            + D+FAWS++DMP +D  +  H+L      +PV+QK+R    ER + IN +VE+ LK  F
Sbjct: 661  HADVFAWSHEDMPGIDRGIACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLKAGF 720

Query: 2597 IRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLVDST 2776
            IR   YP W++N VLVKKA+GKW MCVDFTDLN                LP+IDQLVDST
Sbjct: 721  IREAKYPEWISNVVLVKKANGKWRMCVDFTDLN-------KACPKDSFPLPKIDQLVDST 773

Query: 2777 SGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLVNMM 2956
            +G+ LL+FMDAFSGYNQI M+  D+E T FIT  GL+C+ +MPFGLKNAGATYQRLVN +
Sbjct: 774  AGHGLLSFMDAFSGYNQIPMNEQDEENTTFITNMGLFCYRMMPFGLKNAGATYQRLVNKI 833

Query: 2957 LKTSLARPRRYMWTTCWSKATRPR 3028
             K  +            +K+  PR
Sbjct: 834  FKPLIGHTMEVYVDDMITKSREPR 857



 Score =  117 bits (292), Expect(2) = 3e-88
 Identities = 79/229 (34%), Positives = 116/229 (50%), Gaps = 11/229 (4%)
 Frame = +1

Query: 1300 PLKAPIEQIFMEIKKDDLLRLPKPIKEP*SGPGVNKFYNYHQAKGHNTRDCYTLRKEIEK 1479
            PLK  +E+++  I+   LL  P PI +P      ++F  +H   GH    C  L+ ++E 
Sbjct: 299  PLKISMEELYERIEGRGLLYPPAPITKPTHRRDKSRFCKFHDTHGHTISQCRDLKIQVED 358

Query: 1480 LIRRGYLKQYVADDQRPPAETT-NQHPPVERE-------IQMIXXXXXXXXESSIARKRY 1635
            L+R  YL +YV D   P  E+   +   VER+       I++I        +S+ ARK Y
Sbjct: 359  LVRNRYLDEYV-DGVSPVMESQYTRDEGVERDLEREQPTIRVIAGGPTLAGDSNRARKNY 417

Query: 1636 MCQYRTYQRE---GQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSIRLGPPTDQTL 1806
              +Y    RE     P A++ R +++ I +TEDD   +L+PH+D L++   +      T 
Sbjct: 418  -GRYAMTGREVLLNLPAAKKARVRQVPIMWTEDDEEGILYPHEDALVIKALVA----STE 472

Query: 1807 LHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTGSEAMP*G 1953
            L R+LVD+GSS DILF  A D MGI   +L  T T   GF G    P G
Sbjct: 473  LRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMG 521



 Score =  110 bits (275), Expect = 4e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = +1

Query: 2959 KDLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGY 3138
            K L+G T EVYVDDM+ KS +  DHV HL++ + ++R+Y ++LNPEKCAFG  +GKFLGY
Sbjct: 835  KPLIGHTMEVYVDDMITKSREPRDHVKHLEETFELLRKYEMKLNPEKCAFGVGSGKFLGY 894

Query: 3139 LITHRGIEANPEKI 3180
            L++HRGIEANPEKI
Sbjct: 895  LVSHRGIEANPEKI 908



 Score = 60.5 bits (145), Expect = 5e-06
 Identities = 33/116 (28%), Positives = 53/116 (45%)
 Frame = +2

Query: 653  LPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLKGIALVWFSQLR 832
            +P  F+ P   KY    DP  H+  F D   + G + A  CR F LTL+G A  W+ +L 
Sbjct: 5    IPRDFRFPDL-KYSGRSDPLVHIERFNDMTGVQGLTPAQRCRVFLLTLEGRAREWYRKLP 63

Query: 833  SNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRFTTEMLSV 1000
               +  +  +       F G    +     L  M Q++ ES++D+V R+   +L +
Sbjct: 64   RGGIKGYEQMCLELAEQFRGAVAPEDDMMELMGMKQEEHESLRDFVKRYHRAVLDL 119


>emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
            gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  199 bits (505), Expect(4) = 1e-79
 Identities = 117/310 (37%), Positives = 177/310 (57%), Gaps = 5/310 (1%)
 Frame = +2

Query: 2063 SLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*-VARECYLATVQQRAR--QNDP--RQLA 2227
            +LN   A+    +L ++   PTG+  V+G Q   A +C LA + +     + +P  R   
Sbjct: 1565 TLNKLEAISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAIINRAVHNVKTEPHERPKH 1624

Query: 2228 VPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMEC 2407
             P P  + +VT                   KV ++   P K + +G  + ++   S++E 
Sbjct: 1625 TPKPTPHGKVT-------------------KVQINDADPTKLVSLGGDMGEEEVESILEV 1665

Query: 2408 LRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLK 2587
            L+ N+D+FAWS D++  V  ++I H L   P+ KP +QK RK + +R +    +V++ L+
Sbjct: 1666 LKKNIDIFAWSPDEVGGVPADLIMHHLAVKPNIKPRKQKLRKMSADRQEATKTEVQKLLR 1725

Query: 2588 ISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLV 2767
               I+ + +P W+ANPVLV+K++GKW MCVDFTDLN                LP+IDQLV
Sbjct: 1726 AGVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLN-------KACPKHDFPLPRIDQLV 1778

Query: 2768 DSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLV 2947
            D T+G EL++F+DA+SGY+QI M+P D  KT+FIT  G +C + MPFGL+NAGAT+ RLV
Sbjct: 1779 DLTAGCELMSFLDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLRMPFGLRNAGATFARLV 1838

Query: 2948 NMMLKTSLAR 2977
              +L   L R
Sbjct: 1839 YKVLGKQLGR 1848



 Score = 79.7 bits (195), Expect(4) = 1e-79
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            LG   E YVDD++VKS KA DH   LQ+ +  +    I+LNPEKC F    GK LG+L++
Sbjct: 1846 LGRNVEAYVDDIVVKSRKAFDHAIDLQETFDNLCVAGIKLNPEKCVFSVRVGKLLGFLVS 1905

Query: 3148 HRGIEANPEKI 3180
              GIEANPEKI
Sbjct: 1906 ETGIEANPEKI 1916



 Score = 66.2 bits (160), Expect(4) = 1e-79
 Identities = 48/172 (27%), Positives = 73/172 (42%)
 Frame = +1

Query: 1417 YHQAKGHNTRDCYTLRKEIEKLIRRGYLKQYVADDQRPPAETTNQHPPVEREIQMIXXXX 1596
            +H    H T  C  +R+       RG ++     D RP   TT     VE   + +    
Sbjct: 1370 FHGRSSHTTEQCRNIRQ-------RGNVQ-----DPRPQQGTT-----VEAPREAVQEQT 1412

Query: 1597 XXXXESSIARKRYMCQYRTYQREGQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSI 1776
                +    ++R   Q R            P+     I+F  +DA  +L PH DPL++S 
Sbjct: 1413 TPAKQRQDTQRRRKMQIRMVHSITSAGEGAPQYVNQLISFGPEDAEGVLFPHQDPLVISA 1472

Query: 1777 RLGPPTDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTG 1932
             +        + R+LVD GSSAD+++A A+  MG+    L P  T   GF+G
Sbjct: 1473 EIAGFE----VRRILVDGGSSADVIYAEAYAKMGLPTQALTPALTSLRGFSG 1520



 Score = 24.6 bits (52), Expect(4) = 1e-79
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 1929 GVGGHALGVIQLPLTLGTHPHIKTVDVLFYILDVPSVYNVILERPLL 2069
            G     LG   L +  G+  + +   +LF ++++P  YN I  R  L
Sbjct: 1520 GEAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNYNAIFGRATL 1566



 Score = 85.9 bits (211), Expect = 1e-13
 Identities = 67/290 (23%), Positives = 111/290 (38%), Gaps = 11/290 (3%)
 Frame = +2

Query: 431  PPHNSAPSPTPHQHSNLSSRPLAEDPFSLAQQVQEVKDRLGGVEDVVQGRAPIN------ 592
            P      +  P Q + + S+P+  DP   AQQVQ V          +  +A I+      
Sbjct: 1017 PTPGFGTNQAPIQAAMMWSQPIF-DPSMAAQQVQPVGAGQSNATAQLYAQAAISPFATPY 1075

Query: 593  -----IEAMVRQVASSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGY 757
                 +     +        I+  P+PP+FK P   +Y    DP   L+ +   +     
Sbjct: 1076 PQQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHG 1135

Query: 758  SDAITCRAFPLTLKGIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMS 937
             +    +   L L GIA  W+  L +NS+ SW  L   FV +F G   + KT  HL  + 
Sbjct: 1136 DENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIR 1195

Query: 938  QKKDESIQDYVTRFTTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLAC 1117
            Q+  ESI++ + RF+     V+D  E   + A                 EP+++   L  
Sbjct: 1196 QRPGESIRENMRRFSQARCQVQDITEASVINAASAGLLEDELTRKIVNKEPQTLEHPLRI 1255

Query: 1118 TEVFLKVERINTARRELEKDEAVHKKKKDNAKRPASKDAPPPKKQARDHP 1267
             + F + E  +  R+ ++ +          A+       PPP    +  P
Sbjct: 1256 IDGFARGEEDSKRRQAIQAEYDKASVAAAQAQAQVQIAEPPPLSVRQSQP 1305


>emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]
          Length = 1348

 Score =  199 bits (505), Expect(4) = 1e-79
 Identities = 117/310 (37%), Positives = 177/310 (57%), Gaps = 5/310 (1%)
 Frame = +2

Query: 2063 SLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*-VARECYLATVQQRAR--QNDP--RQLA 2227
            +LN   A+    +L ++   PTG+  V+G Q   A +C LA + +     + +P  R   
Sbjct: 839  TLNKLEAISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAIINRAVHNVKTEPHERPKH 898

Query: 2228 VPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLMEC 2407
             P P  + +VT                   KV ++   P K + +G  + ++   S++E 
Sbjct: 899  TPKPTPHGKVT-------------------KVQINDADPTKLVSLGGDMGEEEVESILEV 939

Query: 2408 LRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLK 2587
            L+ N+D+FAWS D++  V  ++I H L   P+ KP +QK RK + +R +    +V++ L+
Sbjct: 940  LKKNIDIFAWSPDEVGGVPADLIMHHLAVKPNIKPRKQKLRKMSADRQEATKTEVQKLLR 999

Query: 2588 ISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLV 2767
               I+ + +P W+ANPVLV+K++GKW MCVDFTDLN                LP+IDQLV
Sbjct: 1000 AGVIQEIDHPEWLANPVLVRKSNGKWRMCVDFTDLN-------KACPKHDFPLPRIDQLV 1052

Query: 2768 DSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLV 2947
            D T+G EL++F+DA+SGY+QI M+P D  KT+FIT  G +C + MPFGL+NAGAT+ RLV
Sbjct: 1053 DLTAGCELMSFLDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLRMPFGLRNAGATFARLV 1112

Query: 2948 NMMLKTSLAR 2977
              +L   L R
Sbjct: 1113 YKVLGKQLGR 1122



 Score = 79.7 bits (195), Expect(4) = 1e-79
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            LG   E YVDD++VKS KA DH   LQ+ +  +    I+LNPEKC F    GK LG+L++
Sbjct: 1120 LGRNVEAYVDDIVVKSRKAFDHAIDLQETFDNLCVAGIKLNPEKCVFSVRVGKLLGFLVS 1179

Query: 3148 HRGIEANPEKI 3180
              GIEANPEKI
Sbjct: 1180 EAGIEANPEKI 1190



 Score = 66.2 bits (160), Expect(4) = 1e-79
 Identities = 48/172 (27%), Positives = 73/172 (42%)
 Frame = +1

Query: 1417 YHQAKGHNTRDCYTLRKEIEKLIRRGYLKQYVADDQRPPAETTNQHPPVEREIQMIXXXX 1596
            +H    H T  C  +R+       RG ++     D RP   TT     VE   + +    
Sbjct: 644  FHGRSSHTTEQCRNIRQ-------RGNVQ-----DPRPQQGTT-----VEAPREAVQEQT 686

Query: 1597 XXXXESSIARKRYMCQYRTYQREGQPRAQRPRTQEIAITFTEDDARDLLHPHDDPLIVSI 1776
                +    ++R   Q R            P+     I+F  +DA  +L PH DPL++S 
Sbjct: 687  TPAKQRQDTQRRRKMQIRMVHSITSAGEGAPQYVNQLISFGPEDAEGVLFPHQDPLVISA 746

Query: 1777 RLGPPTDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVGFTG 1932
             +        + R+LVD GSSAD+++A A+  MG+    L P  T   GF+G
Sbjct: 747  EIAGFE----VRRILVDGGSSADVIYAEAYAKMGLPTQALTPALTSLRGFSG 794



 Score = 24.6 bits (52), Expect(4) = 1e-79
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 1929 GVGGHALGVIQLPLTLGTHPHIKTVDVLFYILDVPSVYNVILERPLL 2069
            G     LG   L +  G+  + +   +LF ++++P  YN I  R  L
Sbjct: 794  GEAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNYNAIFGRATL 840



 Score = 85.9 bits (211), Expect = 1e-13
 Identities = 67/290 (23%), Positives = 111/290 (38%), Gaps = 11/290 (3%)
 Frame = +2

Query: 431  PPHNSAPSPTPHQHSNLSSRPLAEDPFSLAQQVQEVKDRLGGVEDVVQGRAPIN------ 592
            P      +  P Q + + S+P+  DP   AQQVQ V          +  +A I+      
Sbjct: 291  PTPGFGTNQAPIQAAMMWSQPIF-DPSMAAQQVQPVGAGQSNATAQLYAQAAISPFATPY 349

Query: 593  -----IEAMVRQVASSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGY 757
                 +     +        I+  P+PP+FK P   +Y    DP   L+ +   +     
Sbjct: 350  PQQGAVNRAGGEKGLPLSGGIKTRPIPPQFKFPPVPRYSGETDPKEFLSIYESAIEAAHG 409

Query: 758  SDAITCRAFPLTLKGIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMS 937
             +    +   L L GIA  W+  L +NS+ SW  L   FV +F G   + KT  HL  + 
Sbjct: 410  DENTKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIR 469

Query: 938  QKKDESIQDYVTRFTTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLAC 1117
            Q+  ESI++ + RF+     V+D  E   + A                 EP+++   L  
Sbjct: 470  QRPGESIRENMRRFSQARCQVQDITEASVINAASAGLLEDELTRKIVNKEPQTLEHPLRI 529

Query: 1118 TEVFLKVERINTARRELEKDEAVHKKKKDNAKRPASKDAPPPKKQARDHP 1267
             + F + E  +  R+ ++ +          A+       PPP    +  P
Sbjct: 530  IDGFARGEEDSKRRQAIQAEYDKASVAAAQAQAQVQIAEPPPLSVRQSQP 579


>emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa Japonica Group]
          Length = 2008

 Score =  209 bits (532), Expect(3) = 2e-79
 Identities = 120/312 (38%), Positives = 171/312 (54%), Gaps = 6/312 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VAREC------YLATVQQRARQNDPRQ 2221
            P+L  F AVP   +++M+   P G+  +R     A  C         T +  + + D R 
Sbjct: 871  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAHTHEMASAREDIRL 930

Query: 2222 LAVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLM 2401
             A       + VT+ S+         S  + +K+ L P  P K              +L+
Sbjct: 931  AAATASEGEIPVTKTSKS------GESEAKTKKIPLDPSDPTKTA----------ESALI 974

Query: 2402 ECLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQY 2581
              L+NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + 
Sbjct: 975  TFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKL 1034

Query: 2582 LKISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQ 2761
            L   FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ
Sbjct: 1035 LAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQ 1087

Query: 2762 LVDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQR 2941
            +VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR
Sbjct: 1088 VVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQR 1147

Query: 2942 LVNMMLKTSLAR 2977
            ++     T + R
Sbjct: 1148 MIQRCFSTQIGR 1159



 Score = 83.6 bits (205), Expect(3) = 2e-79
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1157 IGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1216

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1217 HRGIQANPEKV 1227



 Score = 55.1 bits (131), Expect(3) = 2e-79
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1690 RTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAF 1866
            R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILFA   
Sbjct: 749  RWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTL 804

Query: 1867 DAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 805  DDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFG 843



 Score = 68.9 bits (167), Expect = 1e-08
 Identities = 42/182 (23%), Positives = 76/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 419  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPGSWLTVYGLAIRAAGGDNKAMANYLPVALA 478

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 479  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 538

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 539  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTAS 598

Query: 1160 RE 1165
            ++
Sbjct: 599  KQ 600


>gb|ABA97957.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1984

 Score =  206 bits (525), Expect(3) = 1e-78
 Identities = 119/311 (38%), Positives = 170/311 (54%), Gaps = 5/311 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+ L P G+  +R     A       C +A  ++ A   +  +L
Sbjct: 868  PALAKFMAVPHYTYMMMKMLGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRL 927

Query: 2225 AVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLME 2404
            A     +     EV   +++K     A+  +K+ L P  P K                  
Sbjct: 928  AAATASE----GEVPATKISKSGESEAKT-KKIPLDPSDPTKTA---------------- 966

Query: 2405 CLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYL 2584
               NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L
Sbjct: 967  ---NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLL 1023

Query: 2585 KISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQL 2764
               FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+
Sbjct: 1024 AAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQV 1076

Query: 2765 VDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRL 2944
            VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR+
Sbjct: 1077 VDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRM 1136

Query: 2945 VNMMLKTSLAR 2977
            +     T + R
Sbjct: 1137 IQRCFSTQIGR 1147



 Score = 83.6 bits (205), Expect(3) = 1e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1145 IGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1204

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1205 HRGIQANPEKV 1215



 Score = 55.1 bits (131), Expect(3) = 1e-78
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1690 RTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAF 1866
            R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILFA   
Sbjct: 746  RWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTL 801

Query: 1867 DAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 802  DDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFG 840



 Score = 69.3 bits (168), Expect = 1e-08
 Identities = 42/182 (23%), Positives = 76/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 416  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALA 475

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 476  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 535

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 536  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTAS 595

Query: 1160 RE 1165
            ++
Sbjct: 596  KQ 597


>gb|ABA95343.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2289

 Score =  205 bits (521), Expect(3) = 1e-78
 Identities = 119/311 (38%), Positives = 170/311 (54%), Gaps = 5/311 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+   P G+  +R     A       C +A  ++ A   +  +L
Sbjct: 1143 PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREEIRL 1202

Query: 2225 AVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLME 2404
            A     +     EV   +++K     AE  +K+ L P  P K  +IG  L          
Sbjct: 1203 AATTVSE----GEVPAAKISKSGETEAET-KKIPLDPSDPTKTAVIGAELDY-------- 1249

Query: 2405 CLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYL 2584
                   +FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L
Sbjct: 1250 -------IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLL 1302

Query: 2585 KISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQL 2764
               FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+
Sbjct: 1303 AAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFG-------LPRIDQV 1355

Query: 2765 VDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRL 2944
            VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR+
Sbjct: 1356 VDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRM 1415

Query: 2945 VNMMLKTSLAR 2977
            +     T + R
Sbjct: 1416 IQRCFSTQIGR 1426



 Score = 84.7 bits (208), Expect(3) = 1e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1424 IGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1483

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1484 HRGIQANPEKV 1494



 Score = 55.1 bits (131), Expect(3) = 1e-78
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1690 RTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAF 1866
            R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILFA   
Sbjct: 1021 RWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTL 1076

Query: 1867 DAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 1077 DDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFG 1115



 Score = 67.8 bits (164), Expect = 3e-08
 Identities = 41/182 (22%), Positives = 76/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 692  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALA 751

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES+++Y+ RF
Sbjct: 752  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLREYIRRF 811

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 812  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTAS 871

Query: 1160 RE 1165
            ++
Sbjct: 872  KQ 873


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  220 bits (561), Expect(2) = 1e-78
 Identities = 109/210 (51%), Positives = 141/210 (67%)
 Frame = +2

Query: 2342 PAKPLLIGCTLSDDLRRSLMECLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQ 2521
            P++ + I   L  +L+  L+  LR N   FAWS +DMP +D  V  H LN DP  KP++Q
Sbjct: 726  PSRCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQ 785

Query: 2522 KKRKTAPER*QFINEQVEQYLKISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXX 2701
            K+RK  P+R + +NE+V++ L    I  V YP W+ NPV+VKK +GKW +C+DFTDLN  
Sbjct: 786  KRRKLGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPVVVKKKNGKWRVCIDFTDLN-- 843

Query: 2702 XXXXXXXXXXXXXXLPQIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERG 2881
                          LP ID+LV++T+GNELL+FMDAFSGYNQI MH +D+EKT FIT++G
Sbjct: 844  -----KACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVFITDQG 898

Query: 2882 LYCFIVMPFGLKNAGATYQRLVNMMLKTSL 2971
             YC+ VMPFGLKNAGATY RLVN M    L
Sbjct: 899  TYCYKVMPFGLKNAGATYPRLVNQMFTDQL 928



 Score =  102 bits (255), Expect(2) = 1e-78
 Identities = 44/73 (60%), Positives = 60/73 (82%)
 Frame = +1

Query: 2962 DLLGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYL 3141
            D L  + EVY+DDMLVKS +AE+H++HL+Q + V+ RYN++LNP KC FG  +G+FLGYL
Sbjct: 926  DQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYL 985

Query: 3142 ITHRGIEANPEKI 3180
            +T RGIEANP++I
Sbjct: 986  VTRRGIEANPKQI 998


>emb|CAD39529.2| OSJNBa0027O01.4 [Oryza sativa Japonica Group]
          Length = 2013

 Score =  204 bits (518), Expect(3) = 2e-78
 Identities = 118/311 (37%), Positives = 169/311 (54%), Gaps = 5/311 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+   P G+  +R     A       C +A  ++ A   +  +L
Sbjct: 871  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRL 930

Query: 2225 AVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLME 2404
            A     +     EV   +++K     A+  +K+ L P  P K                  
Sbjct: 931  AAATASE----GEVPATKISKSGESEAKT-KKIPLDPSDPTKTA---------------- 969

Query: 2405 CLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYL 2584
               NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L
Sbjct: 970  ---NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLL 1026

Query: 2585 KISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQL 2764
               FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+
Sbjct: 1027 AAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQV 1079

Query: 2765 VDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRL 2944
            VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR+
Sbjct: 1080 VDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRM 1139

Query: 2945 VNMMLKTSLAR 2977
            +     T + R
Sbjct: 1140 IQRCFSTQIGR 1150



 Score = 84.7 bits (208), Expect(3) = 2e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1148 IGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1207

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1208 HRGIQANPEKV 1218



 Score = 55.8 bits (133), Expect(3) = 2e-78
 Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 5/193 (2%)
 Frame = +1

Query: 1417 YHQAKGHNTRDCYTLRK---EIEKLIRRGYLKQYVADDQRPPAETTNQHPPVEREIQMIX 1587
            +H    H  +DC+  ++   +  K  R+   ++     ++   +T        +E+  I 
Sbjct: 659  HHPNSNHVAKDCFVYKQFADQYTKTARKNSDEEQSTSRKKDDGDTPAGFQDHRKELNHIF 718

Query: 1588 XXXXXXXESSIARKRYMCQYRTYQREGQPRAQRPRTQEIAITFTEDDARD-LLHPHDDPL 1764
                        RK+ + + R          Q  R  EIAI F   D  D ++HP   PL
Sbjct: 719  GGPLAYESK---RKQKLTE-REINAVQPDTPQYLRWSEIAIKFDRSDHPDRVVHPGRYPL 774

Query: 1765 IVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVG-FTGSEA 1941
            +    L P      L R L+D GS+ +ILFA   D M I R  L+P+  PF G   G  A
Sbjct: 775  V----LDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSA 830

Query: 1942 MP*G*SNCP*PWG 1980
             P G    P  +G
Sbjct: 831  TPLGQITLPVTFG 843



 Score = 69.3 bits (168), Expect = 1e-08
 Identities = 42/182 (23%), Positives = 76/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 419  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALA 478

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 479  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 538

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 539  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTAS 598

Query: 1160 RE 1165
            ++
Sbjct: 599  KQ 600


>emb|CAH66045.1| OSIGBa0107A02.6 [Oryza sativa Indica Group]
          Length = 1009

 Score =  206 bits (525), Expect(3) = 2e-78
 Identities = 117/310 (37%), Positives = 166/310 (53%), Gaps = 4/310 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VARECYLATVQQRARQNDPRQLAVPPP 2239
            P+L  F AVP   +++M+   P G+  +R     A  C     ++       R++ +   
Sbjct: 292  PALAKFMAVPHYTYMMMKMPGPRGVISLRSDIKQAVTCD----KESCEMAQTREITLARE 347

Query: 2240 RQYMQVTEVSRPQLTKERALSAEELE----KVYLHPDYPAKPLLIGCTLSDDLRRSLMEC 2407
               +  T  S  ++   +    EE +    K+ L P  P+K                   
Sbjct: 348  EIRLAATMASEGEVPATKMSKTEESDAKTKKIPLDPSDPSKTA----------------- 390

Query: 2408 LRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYLK 2587
              NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L 
Sbjct: 391  --NNKDIFAWKPSDMPGIPREVIEHSLHVKDDAKPIKQRLRRFAQDRKNVIKEELTKLLA 448

Query: 2588 ISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQLV 2767
              FI+ VLYP W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+V
Sbjct: 449  AGFIKEVLYPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFVLPRIDQVV 501

Query: 2768 DSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRLV 2947
            DST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC+I MPFGLKNAGATYQR++
Sbjct: 502  DSTAGCELLSFLDCYSGYHQIRLKESDCSKTSFITPFGAYCYITMPFGLKNAGATYQRMI 561

Query: 2948 NMMLKTSLAR 2977
                 T + R
Sbjct: 562  QRCFSTQIGR 571



 Score = 83.2 bits (204), Expect(3) = 2e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D ++ L++ +  +R + ++LNPE+C FG  +GK LG+L++
Sbjct: 569  IGRNVEAYVDDVVVKTKQKDDLIADLEETFASIRAFRMKLNPERCIFGVPSGKLLGFLVS 628

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEKI
Sbjct: 629  HRGIQANPEKI 639



 Score = 54.7 bits (130), Expect(3) = 2e-78
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1690 RTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAF 1866
            R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILFA   
Sbjct: 170  RWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTL 225

Query: 1867 DAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 226  DDMQIPRTELKPSNAPFHGVIPGLSATPLGQITLPVTFG 264


>emb|CAH66866.1| H0307D04.11 [Oryza sativa Indica Group]
          Length = 2017

 Score =  204 bits (518), Expect(3) = 2e-78
 Identities = 118/311 (37%), Positives = 169/311 (54%), Gaps = 5/311 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+   P G+  +R     A       C +A +++ A   +  +L
Sbjct: 875  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQIREMASAREDIRL 934

Query: 2225 AVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLME 2404
            A     +     E+   + +K     A+  +K+ L P  P K                  
Sbjct: 935  AAATASE----GEIPATKTSKSGESEAKT-KKIPLDPSDPTKTA---------------- 973

Query: 2405 CLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYL 2584
               NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L
Sbjct: 974  ---NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLL 1030

Query: 2585 KISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQL 2764
               FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+
Sbjct: 1031 AAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQV 1083

Query: 2765 VDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRL 2944
            VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC+I MPFGLKNAGATYQR+
Sbjct: 1084 VDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYITMPFGLKNAGATYQRM 1143

Query: 2945 VNMMLKTSLAR 2977
            +     T + R
Sbjct: 1144 IQRCFSTQIGR 1154



 Score = 84.7 bits (208), Expect(3) = 2e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1152 IGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1211

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1212 HRGIQANPEKV 1222



 Score = 55.5 bits (132), Expect(3) = 2e-78
 Identities = 40/103 (38%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
 Frame = +1

Query: 1678 AQRPRTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILF 1854
            +Q  R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILF
Sbjct: 749  SQYLRWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILF 804

Query: 1855 AHAFDAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            A   D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 805  AKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFG 847



 Score = 68.9 bits (167), Expect = 1e-08
 Identities = 42/182 (23%), Positives = 75/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G          P+ L 
Sbjct: 423  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALA 482

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 483  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 542

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 543  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTAS 602

Query: 1160 RE 1165
            ++
Sbjct: 603  KQ 604


>emb|CAE03508.2| OSJNBa0053K19.16 [Oryza sativa Japonica Group]
          Length = 2010

 Score =  205 bits (521), Expect(3) = 3e-78
 Identities = 118/312 (37%), Positives = 170/312 (54%), Gaps = 6/312 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+   P G+  +R     A       C +A  ++ A   +  +L
Sbjct: 868  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRL 927

Query: 2225 AVPPPRQYMQ-VTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLM 2401
            A     +  +  T++S+         S  + +K+ L P  PAK                 
Sbjct: 928  AAATASEGEEPATKISKS------GESEAKTKKIPLDPSDPAKTA--------------- 966

Query: 2402 ECLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQY 2581
                NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + 
Sbjct: 967  ----NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKL 1022

Query: 2582 LKISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQ 2761
            L   FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ
Sbjct: 1023 LAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQ 1075

Query: 2762 LVDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQR 2941
            +VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR
Sbjct: 1076 VVDSTAGRELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQR 1135

Query: 2942 LVNMMLKTSLAR 2977
            ++     T + R
Sbjct: 1136 MIQRCFSTQIGR 1147



 Score = 83.6 bits (205), Expect(3) = 3e-78
 Identities = 32/71 (45%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK +G++++
Sbjct: 1145 IGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLVGFMVS 1204

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1205 HRGIQANPEKV 1215



 Score = 55.1 bits (131), Expect(3) = 3e-78
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 5/199 (2%)
 Frame = +1

Query: 1399 VNKFYNYHQAKGHNTRDCYTLRK---EIEKLIRRGYLKQYVADDQRPPAETTNQHPPVER 1569
            +N   ++H    H  +DC+  ++   +  K  R+   ++     ++   +T        +
Sbjct: 650  MNSQCSHHPNSNHVAKDCFVYKQFADQYTKTARKNSDEEQSTSRKKDDGDTPAGFQDHRK 709

Query: 1570 EIQMIXXXXXXXXESSIARKRYMCQYRTYQREGQPRAQRPRTQEIAITFTEDDARD-LLH 1746
            E+  I             RK+ + + R          Q  R  EIAI F   D  D ++H
Sbjct: 710  ELNHIFGGPLAYESK---RKQKLTE-REINAVQPDTPQYLRWSEIAIKFDRSDHPDRVVH 765

Query: 1747 PHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVG- 1923
            P   PL+    L P      L R L+D GS+ +ILFA   D M I    L+P+  PF G 
Sbjct: 766  PGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPHSELKPSNAPFHGV 821

Query: 1924 FTGSEAMP*G*SNCP*PWG 1980
              G  A P G    P  +G
Sbjct: 822  IPGLSATPLGQITLPVTFG 840



 Score = 68.2 bits (165), Expect = 2e-08
 Identities = 42/182 (23%), Positives = 75/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 416  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALA 475

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 476  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 535

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P ++  +      + K E   TA 
Sbjct: 536  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPMTVKLMFEKANEYAKAEDAVTAS 595

Query: 1160 RE 1165
            ++
Sbjct: 596  KQ 597


>emb|CAH66795.1| H0215F08.6 [Oryza sativa Indica Group]
          Length = 1991

 Score =  203 bits (516), Expect(3) = 4e-78
 Identities = 119/312 (38%), Positives = 164/312 (52%), Gaps = 6/312 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VAREC------YLATVQQRARQNDPRQ 2221
            P+L  F AVP   +++M+   P G+  +R     A  C         T +  + + D R 
Sbjct: 849  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRL 908

Query: 2222 LAVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLM 2401
             A       M  T+ S+         S  + +K+ L P  P K                 
Sbjct: 909  AAATASEGEMPATKTSKS------GESEAKTKKIPLDPSDPTKTA--------------- 947

Query: 2402 ECLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQY 2581
                NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + 
Sbjct: 948  ----NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKL 1003

Query: 2582 LKISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQ 2761
            L   FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ
Sbjct: 1004 LAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQ 1056

Query: 2762 LVDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQR 2941
            +VDST+G ELL+F+D +SGY+QIR+   D  KT FIT  G YC+I MPFGLKNAGATYQR
Sbjct: 1057 VVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTPFITPFGAYCYITMPFGLKNAGATYQR 1116

Query: 2942 LVNMMLKTSLAR 2977
            ++     T + R
Sbjct: 1117 MIQRCFSTQIGR 1128



 Score = 85.1 bits (209), Expect(3) = 4e-78
 Identities = 34/71 (47%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1126 IGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1185

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEKI
Sbjct: 1186 HRGIQANPEKI 1196



 Score = 55.1 bits (131), Expect(3) = 4e-78
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1690 RTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAF 1866
            R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILFA   
Sbjct: 727  RWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTL 782

Query: 1867 DAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 783  DDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFG 821



 Score = 69.3 bits (168), Expect = 1e-08
 Identities = 49/222 (22%), Positives = 85/222 (38%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G          P+ L 
Sbjct: 397  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALA 456

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 457  DSARSWLHGLPRGTIGSWAELHDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 516

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E      
Sbjct: 517  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAE------ 570

Query: 1160 RELEKDEAVHKKKKDNAKRPASKDAPPPKKQARDHPKTRALK 1285
                  +AV   K+        KD P  +    ++ K R  K
Sbjct: 571  ------DAVTASKQSGPSWKPKKDTPATEGGGSNNHKDRKRK 606


>emb|CAE02298.2| OSJNBa0042F21.5 [Oryza sativa Japonica Group]
          Length = 1950

 Score =  202 bits (514), Expect(3) = 5e-78
 Identities = 117/311 (37%), Positives = 168/311 (54%), Gaps = 5/311 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+   P G+  +R     A       C +A  ++ A   +  +L
Sbjct: 808  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRL 867

Query: 2225 AVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLME 2404
            A     +     E+   + +K     A+  +K+ L P  P K                  
Sbjct: 868  AAATASE----GEIPATKTSKSGESEAKT-KKIPLDPSDPTKTA---------------- 906

Query: 2405 CLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYL 2584
               NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L
Sbjct: 907  ---NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLL 963

Query: 2585 KISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQL 2764
               FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+
Sbjct: 964  AAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQV 1016

Query: 2765 VDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRL 2944
            VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR+
Sbjct: 1017 VDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRM 1076

Query: 2945 VNMMLKTSLAR 2977
            +     T + R
Sbjct: 1077 IQRCFSTQIGR 1087



 Score = 84.7 bits (208), Expect(3) = 5e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1085 IGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1144

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1145 HRGIQANPEKV 1155



 Score = 55.8 bits (133), Expect(3) = 5e-78
 Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 5/193 (2%)
 Frame = +1

Query: 1417 YHQAKGHNTRDCYTLRK---EIEKLIRRGYLKQYVADDQRPPAETTNQHPPVEREIQMIX 1587
            +H    H  +DC+  ++   +  K  R+   ++     ++   +T        +E+  I 
Sbjct: 596  HHPNSNHVAKDCFVYKQFADQYTKTARKNSDEEQSTSRKKDDGDTPAGFQDHRKELNHIF 655

Query: 1588 XXXXXXXESSIARKRYMCQYRTYQREGQPRAQRPRTQEIAITFTEDDARD-LLHPHDDPL 1764
                        RK+ + + R          Q  R  EIAI F   D  D ++HP   PL
Sbjct: 656  GGPLAYESK---RKQKLTE-REINAVQPDTPQYLRWSEIAIKFDRSDHPDRVVHPGRYPL 711

Query: 1765 IVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAFDAMGIGRHRLRPTRTPFVG-FTGSEA 1941
            +    L P      L R L+D GS+ +ILFA   D M I R  L+P+  PF G   G  A
Sbjct: 712  V----LDPVVRNVKLRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSA 767

Query: 1942 MP*G*SNCP*PWG 1980
             P G    P  +G
Sbjct: 768  TPLGQITLPVTFG 780



 Score = 69.3 bits (168), Expect = 1e-08
 Identities = 42/182 (23%), Positives = 76/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 356  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALA 415

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 416  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSGESLRDYIRRF 475

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 476  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYTKAEDAVTAS 535

Query: 1160 RE 1165
            ++
Sbjct: 536  KQ 537


>gb|ABA97627.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2010

 Score =  204 bits (518), Expect(3) = 6e-78
 Identities = 118/311 (37%), Positives = 169/311 (54%), Gaps = 5/311 (1%)
 Frame = +2

Query: 2060 PSLNSFRAVPSTYHLLMRFLTPTGIREVRGSQ*VA-----RECYLATVQQRARQNDPRQL 2224
            P+L  F AVP   +++M+   P G+  +R     A       C +A  ++ A   +  +L
Sbjct: 868  PALAKFMAVPHYTYMMMKMPGPRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREDIRL 927

Query: 2225 AVPPPRQYMQVTEVSRPQLTKERALSAEELEKVYLHPDYPAKPLLIGCTLSDDLRRSLME 2404
            A     +     EV   +++K     A+  +K+ L P  P K                  
Sbjct: 928  AAATASE----GEVPATKISKSGESEAKT-KKIPLDPSDPTKTA---------------- 966

Query: 2405 CLRNNLDLFAWSYDDMPSVDPEVITHRLNADPDKKPVQQKKRKTAPER*QFINEQVEQYL 2584
               NN D+FAW   DMP +  EVI H L+   D KP++Q+ R+ A +R   I E++ + L
Sbjct: 967  ---NNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLL 1023

Query: 2585 KISFIRPVLYPTWVANPVLVKKASGKWPMCVDFTDLNXXXXXXXXXXXXXXXXLPQIDQL 2764
               FI+ VL+P W+ANPVLV+K +G+W MCVD+TDLN                LP+IDQ+
Sbjct: 1024 AAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN-------KSCPKDPFGLPRIDQV 1076

Query: 2765 VDSTSGNELLTFMDAFSGYNQIRMHPDDKEKTAFITERGLYCFIVMPFGLKNAGATYQRL 2944
            VDST+G ELL+F+D +SGY+QIR+   D  KT+FIT  G YC++ MPFGLKNAGATYQR+
Sbjct: 1077 VDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRM 1136

Query: 2945 VNMMLKTSLAR 2977
            +     T + R
Sbjct: 1137 IQRCFSTQIGR 1147



 Score = 83.6 bits (205), Expect(3) = 6e-78
 Identities = 33/71 (46%), Positives = 54/71 (76%)
 Frame = +1

Query: 2968 LGTTKEVYVDDMLVKSHKAEDHVSHLQQAYGVMRRYNIRLNPEKCAFGTAAGKFLGYLIT 3147
            +G   E YVDD++VK+ + +D +S L++ +  +R + ++LNPEKC FG  +GK LG++++
Sbjct: 1145 IGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGVPSGKLLGFMVS 1204

Query: 3148 HRGIEANPEKI 3180
            HRGI+ANPEK+
Sbjct: 1205 HRGIQANPEKV 1215



 Score = 55.1 bits (131), Expect(3) = 6e-78
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1690 RTQEIAITFTEDDARD-LLHPHDDPLIVSIRLGPPTDQTLLHRVLVDSGSSADILFAHAF 1866
            R  EIAI F   D  D ++HP   PL+    L P      L R L+D GS+ +ILFA   
Sbjct: 746  RWSEIAIKFDRSDHPDRVVHPGRYPLV----LDPVVRNVKLRRTLIDGGSALNILFAKTL 801

Query: 1867 DAMGIGRHRLRPTRTPFVG-FTGSEAMP*G*SNCP*PWG 1980
            D M I R  L+P+  PF G   G  A P G    P  +G
Sbjct: 802  DDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFG 840



 Score = 68.9 bits (167), Expect = 1e-08
 Identities = 42/182 (23%), Positives = 76/182 (41%)
 Frame = +2

Query: 620  SSFVAEIRAEPLPPKFKLPSTEKYDDLFDPTNHLAFFLDQMALYGYSDAITCRAFPLTLK 799
            ++F  ++R    P  FK    EKYD   +P + L  +   +   G  +       P+ L 
Sbjct: 416  AAFTDDLRRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANYLPVALA 475

Query: 800  GIALVWFSQLRSNSVTSWADLSRSFVTHFMGMCGQKKTTSHLFKMSQKKDESIQDYVTRF 979
              A  W   L   ++ SWA+L   F+ +F G   +  T   L+ + QK  ES++DY+ RF
Sbjct: 476  DSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQYDLYNVIQKSRESLRDYIRRF 535

Query: 980  TTEMLSVEDTPEIIYVQAFXXXXXXXXXXXXXXXNEPKSMADLLACTEVFLKVERINTAR 1159
            + +   + D  + + + AF                 P+++  +      + K E   TA 
Sbjct: 536  SEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPRTVKLMFEKANEYAKAEDAVTAS 595

Query: 1160 RE 1165
            ++
Sbjct: 596  KQ 597