BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00003922
         (3452 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III s...  1221   0.0  
gb|ABF96484.1| DNA-directed RNA polymerase III 130 kDa polypepti...  1221   0.0  
ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group] g...  1221   0.0  
gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonic...  1221   0.0  
ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III s...  1217   0.0  
ref|XP_003570586.1| PREDICTED: DNA-directed RNA polymerase III s...  1202   0.0  
dbj|BAK05382.1| predicted protein [Hordeum vulgare subsp. vulgare]   1176   0.0  
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1160   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1157   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1155   0.0  
ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [S...  1151   0.0  
gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma ...  1147   0.0  
gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma ...  1147   0.0  
gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...  1147   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1147   0.0  
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par...  1146   0.0  
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par...  1143   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1140   0.0  
ref|XP_006583558.1| PREDICTED: DNA-directed RNA polymerase III s...  1138   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1138   0.0  

>ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Oryza
            brachyantha]
          Length = 1164

 Score = 1221 bits (3160), Expect = 0.0
 Identities = 611/809 (75%), Positives = 696/809 (86%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V   VDKF LLPAFLKVRGLVK+HIDSFNYFI   IK I+KAN+R+    NP+I+L+Y N
Sbjct: 39   VSNPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIKNIVKANNRIEARNNPSIFLRYVN 98

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            + V  P VQV+Y  EK++P  CRL+DRTY+AP+  DIEYT G Q   + K   +IG +PI
Sbjct: 99   VRVGVPSVQVEYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKRKPQFIIGYLPI 158

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  CVLNG+DEAEL++ GECPLDPGGYFI+KG EKVILIQEQLSKNRII+DTDSK R
Sbjct: 159  MLRSYACVLNGRDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDSKRR 218

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV FM+KEKIYLQLNQF+KPIPI+VVM+AMGMESDQE+VQMVGRD
Sbjct: 219  VIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMVGRD 278

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECA ERIYTQKQAL Y+D KV  P +   GN+KEG +++IL DVF+A+
Sbjct: 279  PRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGT---GNQKEGRSKSILRDVFVAH 335

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV++GNFRPKCIY AVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL+SLLFEDLFK+
Sbjct: 336  VPVNSGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLFEDLFKT 395

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGVAQ 2081
            MNS A E +N+  E+   S PLD   HIK++IIT+GLE+AISTGNWD+KRF+MHRKGV+Q
Sbjct: 396  MNSNAVELMNRTSER-IHSSPLDLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQ 454

Query: 2080 VLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 1901
            VLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL
Sbjct: 455  VLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 514

Query: 1900 MTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGKA 1721
            +THVTTD++EGPL  LCY+LGVE L  LSGEE+HA  SYLV+FNGLILGKHR PQRF  A
Sbjct: 515  LTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHAPGSYLVMFNGLILGKHRQPQRFANA 574

Query: 1720 ARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDGV 1541
             RKLRRSG IGEFVSIFVN+KQ CI++ASDGGRVCRPL+IADKG+SR+KEHHM+ELRDG+
Sbjct: 575  MRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKEHHMKELRDGI 634

Query: 1540 RTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAGL 1361
            R+FDDFLR+GLIEYLDVNEENNALIALY  E+E +++V +S ITHIEIEP TILGV AGL
Sbjct: 635  RSFDDFLRDGLIEYLDVNEENNALIALY--EHEDQDNVQRSSITHIEIEPLTILGVVAGL 692

Query: 1360 IPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKFD 1181
            IPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +D
Sbjct: 693  IPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYD 752

Query: 1180 KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDIIC 1001
            KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV KE Y    SD I 
Sbjct: 753  KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYEGGYSDRIV 812

Query: 1000 KPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            KP+ +  KD  + K  M+ LD+DG AAPG
Sbjct: 813  KPQRD--KDGSLLKQNMRALDEDGFAAPG 839



 Score =  525 bits (1352), Expect = e-146
 Identities = 245/291 (84%), Positives = 273/291 (93%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDT++KL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 871  YKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRHGQKGVCG 930

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERG+CPDLIMNPHG+PSRMTIGKMIELLGGKAG+SCG+FHYGSAFGE S
Sbjct: 931  TIVQQEDFPFSERGVCPDLIMNPHGFPSRMTIGKMIELLGGKAGLSCGQFHYGSAFGESS 990

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            G ADKVEDIS TL+KHGFSY+GKD LYSGI G P Q+YIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 991  GTADKVEDISLTLIKHGFSYNGKDLLYSGILGNPCQSYIFMGPIYYQKLKHMVLDKMHAR 1050

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
            A GPRVLLTRQPTEGRSR+GGLRLGEMERDCLIAYGASM+IFERL++SSDPYQVQVC KC
Sbjct: 1051 ASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKC 1110

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLK ++CSMCKNG+N++ M++PYACKLLFQELQ+MNVVPRLKL
Sbjct: 1111 GLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKL 1161


>gb|ABF96484.1| DNA-directed RNA polymerase III 130 kDa polypeptide, putative,
            expressed [Oryza sativa Japonica Group]
          Length = 1039

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 609/809 (75%), Positives = 695/809 (85%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V + VDKF LLPAFLKVRGLVK+HIDSFNYFI   I+ I+KAN+R+    NP+I+L+Y +
Sbjct: 31   VTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIVKANNRIEARNNPSIFLRYNS 90

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            + V  P VQV Y  EK++P  CRL+DRTY+AP+  DIEYT G Q   + K   +IG +PI
Sbjct: 91   VRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKRKPNFIIGYLPI 150

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  CVLNGKDEAEL++ GECPLDPGGYFI+KG EKVILIQEQLSKNRII+DTDSKGR
Sbjct: 151  MLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDSKGR 210

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV FM+KEKIYLQLNQF+KPIPI+VVM+AMGMESDQE+ QMVGRD
Sbjct: 211  VIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRD 270

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECA ERIYTQKQAL Y+D KV  P +   GN+KEG +++IL DVF+A+
Sbjct: 271  PRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGA---GNQKEGRSKSILRDVFVAH 327

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV++GNFRPKCIY AVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL+SLLFEDLFK+
Sbjct: 328  VPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLFEDLFKT 387

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGVAQ 2081
            MNS A E +NK  E+   S PLD   HIK++IIT+GLE+AISTGNWD+KRF+MHRKGV+Q
Sbjct: 388  MNSNAVELMNKTSEK-IHSSPLDLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQ 446

Query: 2080 VLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 1901
            VLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL
Sbjct: 447  VLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 506

Query: 1900 MTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGKA 1721
            +THVTTD++EGPL  LCY+LGVE L  LSGEE+HA  S+LV+FNGLILGKHR PQRF  A
Sbjct: 507  LTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGKHRQPQRFANA 566

Query: 1720 ARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDGV 1541
             RKLRRSG IGEFVSIFVN+KQ CI++ASDGGRVCRPL+IADKG+ R+KEHHM++LRDG+
Sbjct: 567  MRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKEHHMKQLRDGI 626

Query: 1540 RTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAGL 1361
            R+FDDFLR+GLIEYLDVNEENNALIALY  E+E ++DV +S ITHIEIEP TILGV AGL
Sbjct: 627  RSFDDFLRDGLIEYLDVNEENNALIALY--EHEDQDDVQRSSITHIEIEPLTILGVVAGL 684

Query: 1360 IPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKFD 1181
            IPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +D
Sbjct: 685  IPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYD 744

Query: 1180 KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDIIC 1001
            KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV KE Y    SD I 
Sbjct: 745  KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYEGGYSDRIV 804

Query: 1000 KPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            KP+ +  KD  + K  M+ LD+DG AAPG
Sbjct: 805  KPQRD--KDGALLKQNMRALDEDGFAAPG 831



 Score =  313 bits (803), Expect = 3e-82
 Identities = 146/172 (84%), Positives = 160/172 (93%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDT++KL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 862  YKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRHGQKGVCG 921

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCG+FHYGSAFGEPS
Sbjct: 922  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYGSAFGEPS 981

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHM 360
            G+ADKVEDIS TLVKHGFSY+GKD LYSGI G P QAY+FMGPIYYQKLKHM
Sbjct: 982  GNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHM 1033


>ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group]
            gi|108708688|gb|ABF96483.1| DNA-directed RNA polymerase
            III 130 kDa polypeptide, putative, expressed [Oryza
            sativa Japonica Group] gi|113548794|dbj|BAF12237.1|
            Os03g0403100 [Oryza sativa Japonica Group]
          Length = 1155

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 609/809 (75%), Positives = 695/809 (85%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V + VDKF LLPAFLKVRGLVK+HIDSFNYFI   I+ I+KAN+R+    NP+I+L+Y +
Sbjct: 31   VTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIVKANNRIEARNNPSIFLRYNS 90

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            + V  P VQV Y  EK++P  CRL+DRTY+AP+  DIEYT G Q   + K   +IG +PI
Sbjct: 91   VRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKRKPNFIIGYLPI 150

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  CVLNGKDEAEL++ GECPLDPGGYFI+KG EKVILIQEQLSKNRII+DTDSKGR
Sbjct: 151  MLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDSKGR 210

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV FM+KEKIYLQLNQF+KPIPI+VVM+AMGMESDQE+ QMVGRD
Sbjct: 211  VIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRD 270

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECA ERIYTQKQAL Y+D KV  P +   GN+KEG +++IL DVF+A+
Sbjct: 271  PRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGA---GNQKEGRSKSILRDVFVAH 327

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV++GNFRPKCIY AVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL+SLLFEDLFK+
Sbjct: 328  VPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLFEDLFKT 387

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGVAQ 2081
            MNS A E +NK  E+   S PLD   HIK++IIT+GLE+AISTGNWD+KRF+MHRKGV+Q
Sbjct: 388  MNSNAVELMNKTSEK-IHSSPLDLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQ 446

Query: 2080 VLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 1901
            VLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL
Sbjct: 447  VLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 506

Query: 1900 MTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGKA 1721
            +THVTTD++EGPL  LCY+LGVE L  LSGEE+HA  S+LV+FNGLILGKHR PQRF  A
Sbjct: 507  LTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGKHRQPQRFANA 566

Query: 1720 ARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDGV 1541
             RKLRRSG IGEFVSIFVN+KQ CI++ASDGGRVCRPL+IADKG+ R+KEHHM++LRDG+
Sbjct: 567  MRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKEHHMKQLRDGI 626

Query: 1540 RTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAGL 1361
            R+FDDFLR+GLIEYLDVNEENNALIALY  E+E ++DV +S ITHIEIEP TILGV AGL
Sbjct: 627  RSFDDFLRDGLIEYLDVNEENNALIALY--EHEDQDDVQRSSITHIEIEPLTILGVVAGL 684

Query: 1360 IPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKFD 1181
            IPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +D
Sbjct: 685  IPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYD 744

Query: 1180 KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDIIC 1001
            KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV KE Y    SD I 
Sbjct: 745  KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYEGGYSDRIV 804

Query: 1000 KPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            KP+ +  KD  + K  M+ LD+DG AAPG
Sbjct: 805  KPQRD--KDGALLKQNMRALDEDGFAAPG 831



 Score =  532 bits (1371), Expect = e-148
 Identities = 249/291 (85%), Positives = 275/291 (94%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDT++KL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 862  YKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRHGQKGVCG 921

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCG+FHYGSAFGEPS
Sbjct: 922  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYGSAFGEPS 981

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            G+ADKVEDIS TLVKHGFSY+GKD LYSGI G P QAY+FMGPIYYQKLKHMVLDKMHAR
Sbjct: 982  GNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHAR 1041

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
            A GPRVLLTRQPTEGRSR+GGLRLGEMERDCLIAYGASM+IFERL++SSDPYQVQVC KC
Sbjct: 1042 ASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKC 1101

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLK ++CSMCKNG+N++ M++PYACKLLFQELQ+MNVVPRLKL
Sbjct: 1102 GLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKL 1152


>gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonica Group]
          Length = 1174

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 609/809 (75%), Positives = 695/809 (85%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V + VDKF LLPAFLKVRGLVK+HIDSFNYFI   I+ I+KAN+R+    NP+I+L+Y +
Sbjct: 50   VTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIVKANNRIEARNNPSIFLRYNS 109

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            + V  P VQV Y  EK++P  CRL+DRTY+AP+  DIEYT G Q   + K   +IG +PI
Sbjct: 110  VRVGVPSVQVQYIAEKITPHFCRLTDRTYSAPVLADIEYTVGKQYELKRKPNFIIGYLPI 169

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  CVLNGKDEAEL++ GECPLDPGGYFI+KG EKVILIQEQLSKNRII+DTDSKGR
Sbjct: 170  MLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDSKGR 229

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV FM+KEKIYLQLNQF+KPIPI+VVM+AMGMESDQE+ QMVGRD
Sbjct: 230  VIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRD 289

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECA ERIYTQKQAL Y+D KV  P +   GN+KEG +++IL DVF+A+
Sbjct: 290  PRYGDLLYPSIQECAFERIYTQKQALQYMDDKVMYPGA---GNQKEGRSKSILRDVFVAH 346

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV++GNFRPKCIY AVMLRRMMDAILNADTFDDKDYVGNKRLELSGQL+SLLFEDLFK+
Sbjct: 347  VPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLFEDLFKT 406

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGVAQ 2081
            MNS A E +NK  E+   S PLD   HIK++IIT+GLE+AISTGNWD+KRF+MHRKGV+Q
Sbjct: 407  MNSNAVELMNKTSEK-IHSSPLDLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQ 465

Query: 2080 VLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 1901
            VLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL
Sbjct: 466  VLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 525

Query: 1900 MTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGKA 1721
            +THVTTD++EGPL  LCY+LGVE L  LSGEE+HA  S+LV+FNGLILGKHR PQRF  A
Sbjct: 526  LTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLILGKHRQPQRFANA 585

Query: 1720 ARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDGV 1541
             RKLRRSG IGEFVSIFVN+KQ CI++ASDGGRVCRPL+IADKG+ R+KEHHM++LRDG+
Sbjct: 586  MRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRVKEHHMKQLRDGI 645

Query: 1540 RTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAGL 1361
            R+FDDFLR+GLIEYLDVNEENNALIALY  E+E ++DV +S ITHIEIEP TILGV AGL
Sbjct: 646  RSFDDFLRDGLIEYLDVNEENNALIALY--EHEDQDDVQRSSITHIEIEPLTILGVVAGL 703

Query: 1360 IPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKFD 1181
            IPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +D
Sbjct: 704  IPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYD 763

Query: 1180 KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDIIC 1001
            KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV KE Y    SD I 
Sbjct: 764  KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTKEKYEGGYSDRIV 823

Query: 1000 KPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            KP+ +  KD  + K  M+ LD+DG AAPG
Sbjct: 824  KPQRD--KDGALLKQNMRALDEDGFAAPG 850



 Score =  532 bits (1371), Expect = e-148
 Identities = 249/291 (85%), Positives = 275/291 (94%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDT++KL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 881  YKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRHTRRPEVGDKFSSRHGQKGVCG 940

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCG+FHYGSAFGEPS
Sbjct: 941  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGQFHYGSAFGEPS 1000

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            G+ADKVEDIS TLVKHGFSY+GKD LYSGI G P QAY+FMGPIYYQKLKHMVLDKMHAR
Sbjct: 1001 GNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHAR 1060

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
            A GPRVLLTRQPTEGRSR+GGLRLGEMERDCLIAYGASM+IFERL++SSDPYQVQVC KC
Sbjct: 1061 ASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKC 1120

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLK ++CSMCKNG+N++ M++PYACKLLFQELQ+MNVVPRLKL
Sbjct: 1121 GLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQELQAMNVVPRLKL 1171


>ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Setaria italica]
          Length = 1154

 Score = 1217 bits (3148), Expect = 0.0
 Identities = 607/809 (75%), Positives = 698/809 (86%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V   VDKF LLPAFLKVRGLVK+HIDSFNYFI   I+ I++AN+R+    +PNI+L+YTN
Sbjct: 29   VANPVDKFALLPAFLKVRGLVKEHIDSFNYFITRGIRNIIQANNRIEARNDPNIYLRYTN 88

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            ++V  P VQVDY  E+++P  CRL+DRTY+APIKVDIEYT G Q   + K+ ++IG MPI
Sbjct: 89   VHVGTPSVQVDYKVEEITPHFCRLTDRTYSAPIKVDIEYTVGKQHELQFKRNVLIGYMPI 148

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  C+L+GKDEAEL++LGECPLDPGGYFI+KG EKVILIQEQLSKNRII+DTDSKGR
Sbjct: 149  MLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDSKGR 208

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV  +DKEKIYLQLNQF+KPIPI+VVM+AMGMESDQE+VQMVGRD
Sbjct: 209  VIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMVGRD 268

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECASERIYTQ+QAL Y+D KV  P +   GN+KEG +++IL DVF+A+
Sbjct: 269  PRYGDLLFPSIQECASERIYTQQQALQYMDEKVTYPGA---GNQKEGRSKSILRDVFIAH 325

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV NGNFR KCIY  VMLRRMMDAILNA+TFDDKDYVGNKRLELSGQL+SLLFEDLFK+
Sbjct: 326  VPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVGNKRLELSGQLISLLFEDLFKT 385

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGVAQ 2081
            MNS A E +NK  ++ +RS P DF   IK + IT+GLE+AISTGNWD+KRF+MHRKGV+Q
Sbjct: 386  MNSQAVELMNKNSDK-TRSSPSDFSQLIKHESITSGLERAISTGNWDIKRFRMHRKGVSQ 444

Query: 2080 VLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 1901
            VLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL
Sbjct: 445  VLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 504

Query: 1900 MTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGKA 1721
            +THVTTD++EGPL  LC +LGVE L  LSGEE+HA  S+LV+FNGLILGKHR PQ F  A
Sbjct: 505  LTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHRQPQTFANA 564

Query: 1720 ARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDGV 1541
             R LRRSG+IGEFVSIFVN+KQ CI++ASDGGRVCRPL+IADKG+SR+KEHHM+ELRDGV
Sbjct: 565  MRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKEHHMKELRDGV 624

Query: 1540 RTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAGL 1361
            R+FDDFLR+GLIEYLDVNEENNALIALY  E+  ++DV +S ITHIEIEP +ILGV +GL
Sbjct: 625  RSFDDFLRDGLIEYLDVNEENNALIALY--EHVDQDDVERSSITHIEIEPLSILGVVSGL 682

Query: 1360 IPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKFD 1181
            IPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +D
Sbjct: 683  IPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYD 742

Query: 1180 KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDIIC 1001
            KLGAGQNATVAVM YSGYDIEDAIVMNKSSLDRGFGRCIA+KK TVIKE Y    SD I 
Sbjct: 743  KLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVIKEYYGEGVSDRIA 802

Query: 1000 KPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            KP+ +  KD  + K  M+ LD+DGIAAPG
Sbjct: 803  KPQRD--KDGALVKQNMRALDEDGIAAPG 829



 Score =  541 bits (1393), Expect = e-150
 Identities = 254/291 (87%), Positives = 278/291 (95%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDTN+KL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 861  YKDSPAIYKGVDGETTVVDRVMLCSDTNEKLSIKCIIRHTRRPEVGDKFSSRHGQKGVCG 920

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIEL+GGKAGVSCGRFHYGSAFGEPS
Sbjct: 921  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELIGGKAGVSCGRFHYGSAFGEPS 980

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            G+ADKVEDIS TL+KHGFSY+GKDFLYSGI G PL+AYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 981  GNADKVEDISNTLIKHGFSYNGKDFLYSGILGHPLEAYIFMGPIYYQKLKHMVLDKMHAR 1040

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
            A GPRVLLTRQPTEGRSR+GGLRLGEMERDCLIAYGASM+IFERL+LSSDPYQVQVC KC
Sbjct: 1041 ASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLLSSDPYQVQVCRKC 1100

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYN+KLKT++CSMCKNG+N++ M+LPYACKLLFQELQSMNVVPRLKL
Sbjct: 1101 GLLGYYNYKLKTSYCSMCKNGENMAKMRLPYACKLLFQELQSMNVVPRLKL 1151


>ref|XP_003570586.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Brachypodium
            distachyon]
          Length = 1158

 Score = 1202 bits (3110), Expect = 0.0
 Identities = 606/811 (74%), Positives = 693/811 (85%), Gaps = 2/811 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V+R VDKF LLPAFLKVRGLVK+HIDSFNYFI   IK I++AN+R+    +P+I+L+Y +
Sbjct: 32   VRRPVDKFELLPAFLKVRGLVKEHIDSFNYFITKGIKNIVQANNRIEARSDPSIYLRYKD 91

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            I V EP VQVD+  E ++P  CRL+DRTY+AP+ VDIEYT G       K   +IG MPI
Sbjct: 92   IRVGEPSVQVDFRVETITPHFCRLTDRTYSAPVIVDIEYTVGKTHVVHRKPNFIIGYMPI 151

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  CVLNGKDEAEL++ GECPLDPGGYF++KGNEKVILIQEQLSKNRII+DTD+K R
Sbjct: 152  MLRSYACVLNGKDEAELARYGECPLDPGGYFVVKGNEKVILIQEQLSKNRIIIDTDNKKR 211

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV  MDKEKIYLQLNQF+KPIPI+VVM+AMG++SDQEIVQMVGRD
Sbjct: 212  VIASVTSSTHEVKSKTVIVMDKEKIYLQLNQFTKPIPIIVVMKAMGIQSDQEIVQMVGRD 271

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECASERIYTQ+QAL Y+D KV  P     GN KEG ++ +L DVF+A+
Sbjct: 272  PRYGDLLYLSIQECASERIYTQQQALQYMDDKVMFPGP---GNVKEGRSKTLLRDVFVAH 328

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV+NGNFR KCIY AVMLRRM+DAILN+DTFDDKDYVGNKRLELSGQLVSLLFEDLFK+
Sbjct: 329  VPVENGNFREKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLFEDLFKT 388

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHI-KQDIITNGLEKAISTGNWDLKRFKMHRKGVA 2084
            MNS+A + +NK  +  +RS PLDF   I +QD+IT GLE+AISTGNWD+KRFKMHRKGV+
Sbjct: 389  MNSFAVDRMNKNSDM-ARSSPLDFSQLIMQQDLITTGLERAISTGNWDIKRFKMHRKGVS 447

Query: 2083 QVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLA 1904
            QVLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLA
Sbjct: 448  QVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLA 507

Query: 1903 LMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGK 1724
            L+THVTTD++EGPL  LCY+LGVE L  LSGEE+HA  S+LV+FNGLILGKHR PQRF K
Sbjct: 508  LLTHVTTDQEEGPLMNLCYSLGVEKLSLLSGEEIHAPGSFLVMFNGLILGKHRQPQRFAK 567

Query: 1723 AARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDG 1544
            + R  R+SG+IGEFVSIFVN+KQ CI++ASDGGRVCRPL+IADKG SR+KEHHM+ELRDG
Sbjct: 568  SMRTFRQSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGRSRVKEHHMKELRDG 627

Query: 1543 VRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAG 1364
            VR+FDDFLR+GLIEYLDVNEENNALIALY  E+  ++DV +S ITHIEIEP TILGV AG
Sbjct: 628  VRSFDDFLRDGLIEYLDVNEENNALIALY--EHLDQDDVQRSSITHIEIEPMTILGVVAG 685

Query: 1363 LIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKF 1184
            LIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +
Sbjct: 686  LIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGY 745

Query: 1183 DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNT-SDI 1007
            DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV  E Y N T SD 
Sbjct: 746  DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTTEKYANGTISDR 805

Query: 1006 ICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            I KP+ +  KD  + K  M+ LD+DG  APG
Sbjct: 806  IAKPQRD--KDGALIKQNMRALDEDGFVAPG 834



 Score =  538 bits (1387), Expect = e-150
 Identities = 254/291 (87%), Positives = 277/291 (95%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDTNDKL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 865  YKDSPAVYKGVDGETTVVDRVMLCSDTNDKLTIKCIIRHTRRPEVGDKFSSRHGQKGVCG 924

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCGRFHYGSAFGE S
Sbjct: 925  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGESS 984

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            G+AD V+DIS+TLVKHGFSY+GKDFLYSGI G PL+AYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 985  GNADHVDDISHTLVKHGFSYNGKDFLYSGILGHPLEAYIFMGPIYYQKLKHMVLDKMHAR 1044

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
            A GPRVLLTRQPTEGRSR+GGLRLGEMERDCLIAYGASM+IFERL+LSSDPYQVQVC KC
Sbjct: 1045 ASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLLLSSDPYQVQVCRKC 1104

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYN+KLKT+FCSMCKNG+N++ M++PYACKLLFQELQSMNVVPRLKL
Sbjct: 1105 GLLGYYNYKLKTSFCSMCKNGENMAKMRMPYACKLLFQELQSMNVVPRLKL 1155


>dbj|BAK05382.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score = 1176 bits (3042), Expect = 0.0
 Identities = 587/800 (73%), Positives = 683/800 (85%), Gaps = 1/800 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V   VDKF LLPAFLKVRGLVK+HIDSFNYFI   IK I++AN+R+    +P I+L+Y N
Sbjct: 32   VSNPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIKNIVRANNRIEARSDPGIYLEYKN 91

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            IY+ EP VQVD+  E ++P  CRL+DRTY+AP+ VD+EYT G   T   K    IG MPI
Sbjct: 92   IYIGEPSVQVDFRVETITPHFCRLTDRTYSAPVIVDVEYTVGKTHTQHRKPSFTIGYMPI 151

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  CVLNGKDEAEL++ GECPLDPGGYFI+KG EKVILIQEQLSKNRII+DTD+KGR
Sbjct: 152  MLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGAEKVILIQEQLSKNRIIIDTDNKGR 211

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTHE KSKTV  M+KEKIYLQLNQF+K IPI+VVM+AMG+E+DQE+VQMVGRD
Sbjct: 212  VIASVTSSTHEVKSKTVICMEKEKIYLQLNQFTKAIPIIVVMKAMGIETDQEVVQMVGRD 271

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY+ LL  SIQECA+ERIYTQ+QAL Y+D KV   +   +GN K+G ++ IL DVF+A+
Sbjct: 272  PRYADLLYLSIQECATERIYTQQQALQYMDDKV---TYAGAGNIKDGRSKLILRDVFIAH 328

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV+NGNF+PKCIY AVMLRRM+DAILN+DTFDDKDYVGNKRLELSGQLVSLLFEDLFK+
Sbjct: 329  VPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLFEDLFKT 388

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHI-KQDIITNGLEKAISTGNWDLKRFKMHRKGVA 2084
            MN+YA + +NK  +  +RS PLDF   I +QD+IT+GLE+AISTGNWD+KRFKMHRKGV+
Sbjct: 389  MNTYAVDRMNKNSDM-ARSSPLDFSQLIMQQDVITSGLERAISTGNWDIKRFKMHRKGVS 447

Query: 2083 QVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLA 1904
            QVLSRLS++ASLG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLA
Sbjct: 448  QVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLA 507

Query: 1903 LMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGK 1724
            LMTHVTTD++EGPL+ LC++LGVE L  LSGEE+HA  S+LV+FNGLILGKHR PQ+F  
Sbjct: 508  LMTHVTTDQEEGPLRNLCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHRQPQKFAN 567

Query: 1723 AARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDG 1544
              R  RRSG+IGEFVS+FVN+KQ CI++ASDGGRVCRPL+IADKG +R+KEHHM+ELRDG
Sbjct: 568  NMRTFRRSGKIGEFVSVFVNEKQHCIHIASDGGRVCRPLIIADKGRARVKEHHMKELRDG 627

Query: 1543 VRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAG 1364
            +R+FDDFLR+GLIEYLDVNEENNALIALY  E+  ++ V +S ITHIEIEP T+LGV AG
Sbjct: 628  IRSFDDFLRDGLIEYLDVNEENNALIALY--EHVDQDGVQRSSITHIEIEPMTLLGVVAG 685

Query: 1363 LIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKF 1184
            LIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +
Sbjct: 686  LIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGY 745

Query: 1183 DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDII 1004
            DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV  E Y +  SD I
Sbjct: 746  DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAMKKYTVTSEKYGDGISDRI 805

Query: 1003 CKPEMELTKDVFVRKSTMQI 944
             KP+    KD  + K  M++
Sbjct: 806  AKPQR--NKDGVLIKQNMRV 823


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1160 bits (3001), Expect = 0.0
 Identities = 582/814 (71%), Positives = 676/814 (83%), Gaps = 5/814 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            VK+AVDKF LLP FLKVRGLVKQH+DSFNYF++ DIKKI++ANDR+V + +P+I+L++ +
Sbjct: 15   VKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVDPSIYLRFKD 74

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGN--QTTPEVKKGLVIGRM 2987
            + + EP + VD   EKL+P  CRLSD TYAAPI V+IEY  G+  Q T   K  +VIGRM
Sbjct: 75   VRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRVEKNDVVIGRM 134

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL  KDEAEL++LGECPLDPGGYF++KG EKVILIQEQLSKNRII+DTD K
Sbjct: 135  PIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDTDKK 194

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSST  TKSKTV  M+KEKI+LQLNQF+  IPIM+VM+AMGMESDQE+VQMVG
Sbjct: 195  GNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEVVQMVG 254

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            R+PRYS LLL S++ECAS  IYTQ+QAL++L+ KV           KEG    IL D F+
Sbjct: 255  RNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGRGMAILRDTFI 314

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV   NFRPKC+Y AVMLRRMMDAILN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 315  ANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 374

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDF---VHHIKQDIITNGLEKAISTGNWDLKRFKMHR 2096
            K+M S   + ++ +  +PSRS   DF   +  I +D IT GLE+ +STGNWD+KRF+MHR
Sbjct: 375  KTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDVKRFRMHR 434

Query: 2095 KGVAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLT 1916
            KG++QV++RLS+I SLGHMT+ISPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL 
Sbjct: 435  KGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLV 494

Query: 1915 KNLALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQ 1736
            KNLALMTHVTTDE+E PL  LCY+LGVE LE LSGEELH  +S+L+IFNGLILGKHR PQ
Sbjct: 495  KNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNGLILGKHRRPQ 554

Query: 1735 RFGKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRE 1556
            RF  A RKLRR+G+IGEFVS+FVN+KQ C+Y+ASDGGRVCRP+VIADKG SRIKEHHM+E
Sbjct: 555  RFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGKSRIKEHHMKE 614

Query: 1555 LRDGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILG 1376
            L DGVRTFDDFLR+GLIEYLDVNEENNALIALYE + + E        THIEIEPFTILG
Sbjct: 615  LIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPE-------TTHIEIEPFTILG 667

Query: 1375 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIE 1196
            VCAGLIP+PHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVYPQRPLLTT++IE
Sbjct: 668  VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIE 727

Query: 1195 LVKFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNT 1016
            LV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK + + + Y NN 
Sbjct: 728  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYENNA 787

Query: 1015 SDIICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            SD I +P +++  D       MQILDDDG+AAPG
Sbjct: 788  SDRIVRP-LKVGHDA----ERMQILDDDGLAAPG 816



 Score =  541 bits (1394), Expect = e-151
 Identities = 252/291 (86%), Positives = 271/291 (93%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+P+   + GPEGE +V+DRV LCSD N  LCIKFL+RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 849  YKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQKGVCG 908

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 909  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 968

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHADKVE IS TLVKHGFSYSGKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 969  GHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1028

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV+LTRQPTEGR+RNGGLR+GEMERDCLIAYGASM+IFERLM+SSDP++VQVC  C
Sbjct: 1029 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1088

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLK   CS CKNGDN+STMKLPYACKLLFQELQ+MNVVPRLKL
Sbjct: 1089 GLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKL 1139


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1157 bits (2994), Expect = 0.0
 Identities = 583/811 (71%), Positives = 671/811 (82%), Gaps = 2/811 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            VK  VDKF LLP FLKVRGLVKQH+DSFNYF+   I+KI++ANDR+V   +P+I+L++ +
Sbjct: 25   VKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDPSIFLRFKD 84

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQT--TPEVKKGLVIGRM 2987
            + + +P + VD   EKL+P +CRLSD TYAAPI V+IEY +G+ T  T   K  +VIGR+
Sbjct: 85   VRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRI 144

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSCRCVL GKDEAEL++LGECPLDPGGYFIIKG EKV+LIQEQLSKNR+I+DTD K
Sbjct: 145  PIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKK 204

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSST   KSKTV  M+K K+YL LNQF K IPIMVVM+AMGMESDQE+VQMVG
Sbjct: 205  GNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVG 264

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDPRYS LLL SI+ECA+  IYTQ++AL+YL+GKV   +     N +EG A +IL DVFL
Sbjct: 265  RDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFL 324

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV N NFRPKC Y AVMLRRM++A+LN D  DDKDYVGNKRLELSGQLVSLLFEDLF
Sbjct: 325  ANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLF 384

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGV 2087
            K+M S   + V+ +  +PSRS   D    I +D IT GLE+ +STGN+D+KRFKMHRKG+
Sbjct: 385  KTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGM 444

Query: 2086 AQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNL 1907
             QVL+RLSFI +LGHMTR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KNL
Sbjct: 445  TQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNL 504

Query: 1906 ALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFG 1727
            ALMTHVTTDE+EGPL  LCY LGVE LE LSGEELH  +S+LVIFNGLILGKHR P+ F 
Sbjct: 505  ALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFA 564

Query: 1726 KAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRD 1547
               RKLRR+G+IGEFVS+FVN+KQRC+Y+ASDGGRVCRPLVIADKG+SRIKEHHM+EL D
Sbjct: 565  DVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELSD 624

Query: 1546 GVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCA 1367
            GVR+FDDFLREGLIEYLDVNEENNALIALYE +   +        THIEIEPFTILGV A
Sbjct: 625  GVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPD-------TTHIEIEPFTILGVIA 677

Query: 1366 GLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVK 1187
            GLIPYPHHNQSPRNTYQCAMGKQAMGN+A+NQL R D++LYLLVYPQRPLLTT++IELV 
Sbjct: 678  GLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVG 737

Query: 1186 FDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDI 1007
            +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK T I + Y N+TSD 
Sbjct: 738  YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDR 797

Query: 1006 ICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            I +P+             MQILDDDG+AAPG
Sbjct: 798  ILRPDR-----TGPGSERMQILDDDGLAAPG 823



 Score =  529 bits (1362), Expect = e-147
 Identities = 247/291 (84%), Positives = 266/291 (91%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YR     Y GP+GET V+DRV LCSD N  LCIKFL+RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 856  YRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 915

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 916  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 975

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHAD VE IS TLVKHGFSY+GKD +YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 976  GHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1035

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV+LTRQPTEGR+RNGGLR+GEMERDCLIAYGASM+IFERLM+SSDP++VQVC  C
Sbjct: 1036 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1095

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLK   CS CKNG+N+S+MKLPYACKLL QELQSMN+VPRLKL
Sbjct: 1096 GLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKL 1146


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1155 bits (2988), Expect = 0.0
 Identities = 582/811 (71%), Positives = 671/811 (82%), Gaps = 2/811 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            VK  VDKF LLP FLKVRGLVKQH+DSFNYF+   I+KI++ANDR+V   +P+I+L++ +
Sbjct: 25   VKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGIDPSIFLRFKD 84

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQT--TPEVKKGLVIGRM 2987
            + + +P + VD   EKL+P +CRLSD TYAAPI V+IEY +G+ T  T   K  +VIGR+
Sbjct: 85   VRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRI 144

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSCRCVL GKDEAEL++LGECPLDPGGYFIIKG EKV+LIQEQLSKNR+I+DTD K
Sbjct: 145  PIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKK 204

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSST   KSKTV  M+K K+YL LNQF K IPIMVVM+AMG+ESDQE+VQMVG
Sbjct: 205  GNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESDQEVVQMVG 264

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDPRYS LLL SI+ECA+  IYTQ++AL+YL+GKV   +     N +EG A +IL DVFL
Sbjct: 265  RDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFL 324

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV N NFRPKC Y AVMLRRM++A+LN D  DDKDYVGNKRLELSGQLVSLLFEDLF
Sbjct: 325  ANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLF 384

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGV 2087
            K+M S   + V+ +  +PSRS   D    I +D IT GLE+ +STGN+D+KRFKMHRKG+
Sbjct: 385  KTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGM 444

Query: 2086 AQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNL 1907
             QVL+RLSFI +LGHMTR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KNL
Sbjct: 445  TQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNL 504

Query: 1906 ALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFG 1727
            ALMTHVTTDE+EGPL  LCY LGVE LE LSGEELH  +S+LVIFNGLILGKHR P+ F 
Sbjct: 505  ALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFA 564

Query: 1726 KAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRD 1547
               RKLRR+G+IGEFVS+FVN+KQRC+Y+ASDGGRVCRPLVIADKG+SRIKEHHM+EL D
Sbjct: 565  DVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLD 624

Query: 1546 GVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCA 1367
            GVR+FDDFLREGLIEYLDVNEENNALIALYE +   +        THIEIEPFTILGV A
Sbjct: 625  GVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPD-------TTHIEIEPFTILGVIA 677

Query: 1366 GLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVK 1187
            GLIPYPHHNQSPRNTYQCAMGKQAMGN+A+NQL R D++LYLLVYPQRPLLTT++IELV 
Sbjct: 678  GLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVG 737

Query: 1186 FDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDI 1007
            +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK T I + Y N+TSD 
Sbjct: 738  YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDR 797

Query: 1006 ICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            I +P+             MQILDDDG+AAPG
Sbjct: 798  ILRPDR-----TGPGAERMQILDDDGLAAPG 823



 Score =  531 bits (1367), Expect = e-147
 Identities = 248/291 (85%), Positives = 266/291 (91%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YR     Y GP+GET V+DRV LCSD N  LCIKFL+RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 856  YRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 915

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 916  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 975

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHAD VE IS TLVKHGFSY+GKD +YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 976  GHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1035

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV+LTRQPTEGR+RNGGLR+GEMERDCLIAYGASM+IFERLM+SSDP++VQVC  C
Sbjct: 1036 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1095

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLK   CS CKNGDN+S+MKLPYACKLL QELQSMN+VPRLKL
Sbjct: 1096 GLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKL 1146


>ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [Sorghum bicolor]
            gi|241914906|gb|EER88050.1| hypothetical protein
            SORBIDRAFT_10g006995 [Sorghum bicolor]
          Length = 1137

 Score = 1151 bits (2978), Expect = 0.0
 Identities = 578/809 (71%), Positives = 677/809 (83%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            V++ VDKF LLPAFLKVRGLVK+HIDSFNYFI+  IKKI++AN+R+    +P+I+L+Y +
Sbjct: 13   VRKPVDKFALLPAFLKVRGLVKEHIDSFNYFIDKGIKKIVEANNRIEARNDPSIYLRYLD 72

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLVIGRMPI 2981
            + V  P +  + + E ++P LCRL+DRTY+API+VDI+YT G Q   + +   +IG MPI
Sbjct: 73   VRVGMPSIYENCNVESITPHLCRLTDRTYSAPIEVDIQYTVGKQHVVKRRNKFIIGYMPI 132

Query: 2980 MLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSKGR 2801
            MLRS  C+LN  DE EL+K GECPLDPGGYF++KG EKVILIQEQLSKNRIIVDTDSKGR
Sbjct: 133  MLRSSACILNEMDEDELAKYGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIVDTDSKGR 192

Query: 2800 VTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVGRD 2621
            V ASVTSSTH  KSKTV  MDK KIYLQLNQF+KPIPI+VVM+AMGMESDQE VQMVGRD
Sbjct: 193  VIASVTSSTHAIKSKTVVLMDKGKIYLQLNQFTKPIPIIVVMKAMGMESDQEAVQMVGRD 252

Query: 2620 PRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFLAN 2441
            PRY  LL  SIQECASERIYT++QAL Y+D KV  P +T   N KEG + +IL DVF+A+
Sbjct: 253  PRYGDLLFPSIQECASERIYTRQQALQYMDEKVMYPGAT---NNKEGRSNSILHDVFIAH 309

Query: 2440 VPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLFKS 2261
            VPV +GN RPKCIY AVMLRRM+DAILN+DTFDDKDYVGNKR ELSGQL+SLLFEDLFK+
Sbjct: 310  VPVKDGNLRPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRFELSGQLISLLFEDLFKT 369

Query: 2260 MNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGVAQ 2081
            MNS A E +NK  ++ +RS PLDF   I QD IT GLE+AISTGNWD+KRF+MHRKGV+Q
Sbjct: 370  MNSQAVERMNKNSDK-TRSSPLDFSQLIMQDTITFGLERAISTGNWDIKRFRMHRKGVSQ 428

Query: 2080 VLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 1901
            VLSRLS++A+LG+MTRI+PQFEKTRK SGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL
Sbjct: 429  VLSRLSYMATLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEACGLTKNLAL 488

Query: 1900 MTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFGKA 1721
            ++H+TTD++EGPL  LC++LGVE L  LS EE+HA  S+LV+ NGLILGKH+ PQR    
Sbjct: 489  LSHITTDQEEGPLIDLCHSLGVEDLLFLSSEEIHAPGSFLVMLNGLILGKHKDPQRLVIH 548

Query: 1720 ARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRDGV 1541
             R LRRS  IGEFVSIF+N+KQRC+++ASDGGRVCRPL+IAD G+SRI E HM +LRDG 
Sbjct: 549  LRNLRRSNVIGEFVSIFINEKQRCVHIASDGGRVCRPLIIADMGISRIDETHMTKLRDGT 608

Query: 1540 RTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCAGL 1361
              FDDFL  GLIEYLDVNEENNALIALY  E+  ++DV +S ITHIEIEP +ILGV +GL
Sbjct: 609  YDFDDFLSGGLIEYLDVNEENNALIALY--EHMDQDDVERSSITHIEIEPLSILGVVSGL 666

Query: 1360 IPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVKFD 1181
            IPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D++LYLLVY QRPLLTTK+IELV +D
Sbjct: 667  IPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADSLLYLLVYAQRPLLTTKTIELVGYD 726

Query: 1180 KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDIIC 1001
            KLGAGQNATVAVM YSGYDIEDAIVMNKSSLDRGFGRCIA+KK TV+K++Y++  SD I 
Sbjct: 727  KLGAGQNATVAVMGYSGYDIEDAIVMNKSSLDRGFGRCIALKKYTVLKDNYVDGVSDRIV 786

Query: 1000 KPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            KP+ +  KD  + K  M+ LDDDGI APG
Sbjct: 787  KPQRD--KDGVLMKQNMRALDDDGIVAPG 813



 Score =  538 bits (1386), Expect = e-150
 Identities = 253/291 (86%), Positives = 275/291 (94%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ + A Y G +GETTV+DRV+LCSDTNDKL IK ++RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 844  YKDSPAIYKGVDGETTVVDRVMLCSDTNDKLSIKCIIRHTRRPEVGDKFSSRHGQKGVCG 903

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 904  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 963

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            G+AD V DIS TL+KHGFSY+GKDFLYSGI G PL+AYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 964  GNADNVADISSTLIKHGFSYNGKDFLYSGILGQPLEAYIFMGPIYYQKLKHMVLDKMHAR 1023

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
            A GPRVLLTRQPTEGRSR+GGLRLGEMERDCLIAYGASM+IFERLMLSSDPYQVQVC KC
Sbjct: 1024 ASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPYQVQVCRKC 1083

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLKT++CSMCKNG+N++ M+LPYACKLLFQEL +MNVVPRLKL
Sbjct: 1084 GLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLFQELHAMNVVPRLKL 1134


>gb|EOY19612.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
          Length = 1034

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 580/812 (71%), Positives = 667/812 (82%), Gaps = 3/812 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K AVDKF LLP FLKVRGLVKQH+DSFNYF+   IKKI++ANDR+V   +P+I+L++ +
Sbjct: 33   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVDPSIYLRFKD 92

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGN--QTTPEVKKGLVIGRM 2987
            + + EP + ++   EK++P  CRLSD TYAAPI V+IEY +G+  Q T   K  LVIGRM
Sbjct: 93   VRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRM 152

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL GKDEAEL++LGECPLDPGGYF+IKG EKVILIQEQLSKNRII+D D K
Sbjct: 153  PIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKK 212

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSS+  TKSKTV  M+KEKIYL LNQF K IPIMVVM+AMGMESDQE+VQMVG
Sbjct: 213  GNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVG 272

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDP Y+ +LL SI+ECA   IYTQ+QAL+YL+ KV     T   + KEG A +IL DVFL
Sbjct: 273  RDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFL 332

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV + NFRPKC+Y AVMLRRM++AILN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 333  ANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 392

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIK-QDIITNGLEKAISTGNWDLKRFKMHRKG 2090
            K+  S   + ++ V  +PSRS  LD    ++ ++ IT GLE+ +STGN+D+KRFKMHRKG
Sbjct: 393  KTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKG 452

Query: 2089 VAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKN 1910
            + QVL+RLSFI +LG+MT++SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KN
Sbjct: 453  MTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN 512

Query: 1909 LALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRF 1730
            LALMTHVTTDEDEGPL  LCY LGVE LE LSGEELH  +S+LVI NGLILGKHR PQ F
Sbjct: 513  LALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHF 572

Query: 1729 GKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELR 1550
              A RKLRR+G++GEFVS+FVN+KQRC+Y+ASDGGRVCRPLVIADKGVSRIKEHHM+EL 
Sbjct: 573  AVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELL 632

Query: 1549 DGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVC 1370
            DGVRTFDDFLR+GLIEYLDVNEENNALIALYE E   E        THIEIEPFTILGVC
Sbjct: 633  DGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPE-------TTHIEIEPFTILGVC 685

Query: 1369 AGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELV 1190
            AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R DT+LYLLVYPQRPLLTT++IELV
Sbjct: 686  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELV 745

Query: 1189 KFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSD 1010
             +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +K+ + + + Y    SD
Sbjct: 746  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYETGASD 805

Query: 1009 IICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
             I +P+             MQILDDDGIA PG
Sbjct: 806  RILRPQR-----TGPGSERMQILDDDGIATPG 832



 Score =  272 bits (696), Expect(2) = 6e-70
 Identities = 124/148 (83%), Positives = 135/148 (91%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YRP    Y GPEGE+ V+DRV LC+D N  L IKFL+RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 865  YRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCG 924

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 925  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 984

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYS 432
            GHAD+VE IS TL+KHGFSY+GKDF+YS
Sbjct: 985  GHADRVEAISETLIKHGFSYNGKDFIYS 1012



 Score = 22.3 bits (46), Expect(2) = 6e-70
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 442  FFIQASQGFPFKLIYSWDQFIIRS 371
            + +Q  Q    K I+ WDQF  RS
Sbjct: 1011 YSVQVLQVVHCKHIFLWDQFTTRS 1034


>gb|EOY19610.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
          Length = 1011

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 580/812 (71%), Positives = 667/812 (82%), Gaps = 3/812 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K AVDKF LLP FLKVRGLVKQH+DSFNYF+   IKKI++ANDR+V   +P+I+L++ +
Sbjct: 33   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVDPSIYLRFKD 92

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGN--QTTPEVKKGLVIGRM 2987
            + + EP + ++   EK++P  CRLSD TYAAPI V+IEY +G+  Q T   K  LVIGRM
Sbjct: 93   VRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRM 152

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL GKDEAEL++LGECPLDPGGYF+IKG EKVILIQEQLSKNRII+D D K
Sbjct: 153  PIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKK 212

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSS+  TKSKTV  M+KEKIYL LNQF K IPIMVVM+AMGMESDQE+VQMVG
Sbjct: 213  GNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVG 272

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDP Y+ +LL SI+ECA   IYTQ+QAL+YL+ KV     T   + KEG A +IL DVFL
Sbjct: 273  RDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFL 332

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV + NFRPKC+Y AVMLRRM++AILN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 333  ANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 392

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIK-QDIITNGLEKAISTGNWDLKRFKMHRKG 2090
            K+  S   + ++ V  +PSRS  LD    ++ ++ IT GLE+ +STGN+D+KRFKMHRKG
Sbjct: 393  KTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKG 452

Query: 2089 VAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKN 1910
            + QVL+RLSFI +LG+MT++SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KN
Sbjct: 453  MTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN 512

Query: 1909 LALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRF 1730
            LALMTHVTTDEDEGPL  LCY LGVE LE LSGEELH  +S+LVI NGLILGKHR PQ F
Sbjct: 513  LALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHF 572

Query: 1729 GKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELR 1550
              A RKLRR+G++GEFVS+FVN+KQRC+Y+ASDGGRVCRPLVIADKGVSRIKEHHM+EL 
Sbjct: 573  AVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELL 632

Query: 1549 DGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVC 1370
            DGVRTFDDFLR+GLIEYLDVNEENNALIALYE E   E        THIEIEPFTILGVC
Sbjct: 633  DGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPE-------TTHIEIEPFTILGVC 685

Query: 1369 AGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELV 1190
            AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R DT+LYLLVYPQRPLLTT++IELV
Sbjct: 686  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELV 745

Query: 1189 KFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSD 1010
             +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +K+ + + + Y    SD
Sbjct: 746  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYETGASD 805

Query: 1009 IICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
             I +P+             MQILDDDGIA PG
Sbjct: 806  RILRPQR-----TGPGSERMQILDDDGIATPG 832



 Score =  271 bits (692), Expect = 2e-69
 Identities = 123/147 (83%), Positives = 134/147 (91%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YRP    Y GPEGE+ V+DRV LC+D N  L IKFL+RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 865  YRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCG 924

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 925  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 984

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLY 435
            GHAD+VE IS TL+KHGFSY+GKDF+Y
Sbjct: 985  GHADRVEAISETLIKHGFSYNGKDFIY 1011


>gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 580/812 (71%), Positives = 667/812 (82%), Gaps = 3/812 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K AVDKF LLP FLKVRGLVKQH+DSFNYF+   IKKI++ANDR+V   +P+I+L++ +
Sbjct: 33   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVDPSIYLRFKD 92

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGN--QTTPEVKKGLVIGRM 2987
            + + EP + ++   EK++P  CRLSD TYAAPI V+IEY +G+  Q T   K  LVIGRM
Sbjct: 93   VRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRM 152

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL GKDEAEL++LGECPLDPGGYF+IKG EKVILIQEQLSKNRII+D D K
Sbjct: 153  PIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKK 212

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSS+  TKSKTV  M+KEKIYL LNQF K IPIMVVM+AMGMESDQE+VQMVG
Sbjct: 213  GNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVG 272

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDP Y+ +LL SI+ECA   IYTQ+QAL+YL+ KV     T   + KEG A +IL DVFL
Sbjct: 273  RDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFL 332

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV + NFRPKC+Y AVMLRRM++AILN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 333  ANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 392

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIK-QDIITNGLEKAISTGNWDLKRFKMHRKG 2090
            K+  S   + ++ V  +PSRS  LD    ++ ++ IT GLE+ +STGN+D+KRFKMHRKG
Sbjct: 393  KTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKG 452

Query: 2089 VAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKN 1910
            + QVL+RLSFI +LG+MT++SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KN
Sbjct: 453  MTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN 512

Query: 1909 LALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRF 1730
            LALMTHVTTDEDEGPL  LCY LGVE LE LSGEELH  +S+LVI NGLILGKHR PQ F
Sbjct: 513  LALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHF 572

Query: 1729 GKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELR 1550
              A RKLRR+G++GEFVS+FVN+KQRC+Y+ASDGGRVCRPLVIADKGVSRIKEHHM+EL 
Sbjct: 573  AVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELL 632

Query: 1549 DGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVC 1370
            DGVRTFDDFLR+GLIEYLDVNEENNALIALYE E   E        THIEIEPFTILGVC
Sbjct: 633  DGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPE-------TTHIEIEPFTILGVC 685

Query: 1369 AGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELV 1190
            AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R DT+LYLLVYPQRPLLTT++IELV
Sbjct: 686  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELV 745

Query: 1189 KFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSD 1010
             +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +K+ + + + Y    SD
Sbjct: 746  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYETGASD 805

Query: 1009 IICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
             I +P+             MQILDDDGIA PG
Sbjct: 806  RILRPQR-----TGPGSERMQILDDDGIATPG 832



 Score =  537 bits (1384), Expect = e-149
 Identities = 250/291 (85%), Positives = 270/291 (92%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YRP    Y GPEGE+ V+DRV LC+D N  L IKFL+RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 865  YRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCG 924

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 925  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 984

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHAD+VE IS TL+KHGFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 985  GHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1044

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV+LTRQPTEGR+RNGGLR+GEMERDCLIAYGASM+IFERLM+SSDP++VQVC KC
Sbjct: 1045 GNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKC 1104

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYY+HKLKT  CS CKNGDNVSTMKLPYACKLL QELQSMN+VPRLKL
Sbjct: 1105 GLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKL 1155


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1147 bits (2967), Expect = 0.0
 Identities = 580/812 (71%), Positives = 668/812 (82%), Gaps = 3/812 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K AVDKF LLP FLKVRGLVKQH+DSFNYF+  +IKKI+KANDR+  + +P+I+L++ +
Sbjct: 35   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLD 94

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGN--QTTPEVKKGLVIGRM 2987
            + + EP V V+   E ++P +CRLSD TYAAPI VDIEY + +  Q  P  KK +VIGRM
Sbjct: 95   VRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPREKKDVVIGRM 154

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRS  CVL+GKDEAEL++LGECPLDPGGYFIIKG EKV+LIQEQLSKNRII+DTD K
Sbjct: 155  PIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKK 214

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKP-IPIMVVMRAMGMESDQEIVQMV 2630
            G + ASVTSST  TKSKTV  M+ EKIYLQLN F+ P IPIMVV++AMGMES QE+VQMV
Sbjct: 215  GNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQMV 274

Query: 2629 GRDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVF 2450
            GRDPRY  LLL SI+ECA E+IYTQ+QAL+YL+ KV       +   KEG A  IL DVF
Sbjct: 275  GRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGRALGILRDVF 334

Query: 2449 LANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDL 2270
            LANVPV   NF PKCIY AVM+RRMMDAIL+ D  DDKDYVGNKRLELSGQL+SLLFEDL
Sbjct: 335  LANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQLISLLFEDL 394

Query: 2269 FKSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKG 2090
            FK+M S   + ++K+  + SRS   DF  H+  +II+ GLE+ +STGNWD+KRF+MHRKG
Sbjct: 395  FKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKG 454

Query: 2089 VAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKN 1910
            ++QVL+RLSFI+++GH+TR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KN
Sbjct: 455  MSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN 514

Query: 1909 LALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRF 1730
            LALMTHVTTD++EGPL  LCY LGVE LE LS EELH  +S+LVIFNG ILGKHR PQ F
Sbjct: 515  LALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRILGKHRRPQYF 574

Query: 1729 GKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELR 1550
                R LRR+G+IGEFVS+FVN+KQ C+Y+ASDGGRVCRPLVIADKGVSRIKE+HM+EL 
Sbjct: 575  ATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRIKEYHMKELS 634

Query: 1549 DGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVC 1370
            DGVRTFDDFLR+GLIEYLDVNEENNALIALYE E   E        THIEIEPFTILGV 
Sbjct: 635  DGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPE-------TTHIEIEPFTILGVV 687

Query: 1369 AGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELV 1190
            AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R DT+LYLLVYPQRPLLTTK+IELV
Sbjct: 688  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIELV 747

Query: 1189 KFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSD 1010
             +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI  KK + + + Y NNT+D
Sbjct: 748  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNTAD 807

Query: 1009 IICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
             I +P     +D       MQILDDDG+AAPG
Sbjct: 808  RIVRPNR--NEDF---TGNMQILDDDGLAAPG 834



 Score =  527 bits (1358), Expect = e-146
 Identities = 247/291 (84%), Positives = 267/291 (91%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YRP    + G EGE TV+DRV L +D ND LCIKFL+R TRRPE+GDKFSSRHGQKGVCG
Sbjct: 865  YRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGVCG 924

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 925  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 984

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHADKV+ IS TL+K GFSY+GKDFLYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 985  GHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1044

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV+LTRQPTEGR+RNGGLR+GEMERDCLIAYGASM+I+ERLM+SSDP++VQVC  C
Sbjct: 1045 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVC 1104

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLKT  CS CKNGDN+STMKLPYACKLL QELQSMN+VPRLKL
Sbjct: 1105 GLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL 1155


>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
            trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
            protein POPTR_0015s005302g, partial [Populus trichocarpa]
          Length = 1034

 Score = 1146 bits (2965), Expect = 0.0
 Identities = 576/811 (71%), Positives = 665/811 (81%), Gaps = 2/811 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            VK AVDKF LLP FLK RGLVKQH+DSFNYFI   IKKI++ANDR+V   +P+++L++T+
Sbjct: 29   VKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVDPSLYLRFTD 88

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPE--VKKGLVIGRM 2987
            + + +P + VD   E+++P +CRLSD TYAAPI V+IEY  G+    E  +K  +VIGRM
Sbjct: 89   VKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGSHGRKEKMIKNDVVIGRM 148

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL GK+EAEL++LGECPLDPGGYF++KG EKVILIQEQLSKNRII+D D K
Sbjct: 149  PIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDNDKK 208

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSST  TKSKTV  M+KEK+YL LNQF+K IPIMVVM+AMGMESDQE+VQMVG
Sbjct: 209  GNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMVG 268

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDPRYS LLL SI+ECAS  +YTQ+QAL+YL+  V   + + S   KE  A  IL DVF+
Sbjct: 269  RDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENRALAILRDVFI 328

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPV   NFRPKCIY AVMLRRMM+A+LN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 329  ANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 388

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKGV 2087
            K+M +   +  + +  + +RS   DF  +I +D ITNGLE+A+STGNWD+KRF+M+RKGV
Sbjct: 389  KTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDVKRFRMNRKGV 448

Query: 2086 AQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKNL 1907
             QVL RLS++ASLGHMTRISPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KNL
Sbjct: 449  TQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNL 508

Query: 1906 ALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRFG 1727
            ALMTHVTTDE+E PL  LC  LGVE LE LSGEELH  +S+LVIFNGLILGKHR PQ+F 
Sbjct: 509  ALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLILGKHRRPQQFA 568

Query: 1726 KAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELRD 1547
             A RKLRR+G+IGEFVS+FVN+KQR +Y+ASDGGRVCRPLVIADKGVSRIKEHHMREL D
Sbjct: 569  NAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRIKEHHMRELMD 628

Query: 1546 GVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVCA 1367
            G RTFDDFL EGLIEYLDVNEENNALIALYE+E   E        THIEIEPFTILGV A
Sbjct: 629  GARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPE-------TTHIEIEPFTILGVVA 681

Query: 1366 GLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELVK 1187
            GLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQ  R D++LYLLVYPQRPLLTT++IELV 
Sbjct: 682  GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRTIELVG 741

Query: 1186 FDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSDI 1007
            +DKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI +KK T   + Y N  SD 
Sbjct: 742  YDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGASDR 801

Query: 1006 ICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            I +P     ++        ++LDDDG+AAPG
Sbjct: 802  ILRPRKNEERE--------RVLDDDGLAAPG 824



 Score =  310 bits (795), Expect = 2e-81
 Identities = 145/178 (81%), Positives = 158/178 (88%), Gaps = 6/178 (3%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YRP    + G EGE+ V+DRV LCSD N+ LCIK+ +RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 857  YRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVCG 916

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 917  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 976

Query: 515  GHADKVEDISY------TLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHM 360
            GHAD+VE I +      TLVKHGFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHM
Sbjct: 977  GHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 1034


>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
            trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
            protein POPTR_0015s005302g, partial [Populus trichocarpa]
          Length = 1035

 Score = 1143 bits (2957), Expect = 0.0
 Identities = 577/812 (71%), Positives = 667/812 (82%), Gaps = 3/812 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            VK AVDKF LLP FLK RGLVKQH+DSFNYFI   IKKI++ANDR+V   +P+++L++T+
Sbjct: 29   VKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVDPSLYLRFTD 88

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPE--VKKGLVIGRM 2987
            + + +P + VD   E+++P +CRLSD TYAAPI V+IEY  G+    E  +K  +VIGRM
Sbjct: 89   VKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGSHGRKEKMIKNDVVIGRM 148

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL GK+EAEL++LGECPLDPGGYF++KG EKVILIQEQLSKNRII+D D K
Sbjct: 149  PIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDNDKK 208

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G + ASVTSST  TKSKTV  M+KEK+YL LNQF+K IPIMVVM+AMGMESDQE+VQMVG
Sbjct: 209  GNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMVG 268

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVG-SPSSTRSGNRKEGLARNILLDVF 2450
            RDPRYS LLL SI+ECAS  +YTQ+QAL+YL+  V  S  S+ S  ++E  A  IL DVF
Sbjct: 269  RDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKQENRALAILRDVF 328

Query: 2449 LANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDL 2270
            +ANVPV   NFRPKCIY AVMLRRMM+A+LN D  DDKDYVGNKRLELSGQL+SLLFEDL
Sbjct: 329  IANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQLISLLFEDL 388

Query: 2269 FKSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRKG 2090
            FK+M +   +  + +  + +RS   DF  +I +D ITNGLE+A+STGNWD+KRF+M+RKG
Sbjct: 389  FKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDVKRFRMNRKG 448

Query: 2089 VAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTKN 1910
            V QVL RLS++ASLGHMTRISPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGEACGL KN
Sbjct: 449  VTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN 508

Query: 1909 LALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQRF 1730
            LALMTHVTTDE+E PL  LC  LGVE LE LSGEELH  +S+LVIFNGLILGKHR PQ+F
Sbjct: 509  LALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLILGKHRRPQQF 568

Query: 1729 GKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMRELR 1550
              A RKLRR+G+IGEFVS+FVN+KQR +Y+ASDGGRVCRPLVIADKGVSRIKEHHMREL 
Sbjct: 569  ANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRIKEHHMRELM 628

Query: 1549 DGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGVC 1370
            DG RTFDDFL EGLIEYLDVNEENNALIALYE+E   E        THIEIEPFTILGV 
Sbjct: 629  DGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPE-------TTHIEIEPFTILGVV 681

Query: 1369 AGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIELV 1190
            AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQ  R D++LYLLVYPQRPLLTT++IELV
Sbjct: 682  AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRTIELV 741

Query: 1189 KFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTSD 1010
             +DKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI +KK T   + Y N  SD
Sbjct: 742  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGASD 801

Query: 1009 IICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
             I +P     ++        ++LDDDG+AAPG
Sbjct: 802  RILRPRKNEERE--------RVLDDDGLAAPG 825



 Score =  310 bits (795), Expect = 2e-81
 Identities = 145/178 (81%), Positives = 158/178 (88%), Gaps = 6/178 (3%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YRP    + G EGE+ V+DRV LCSD N+ LCIK+ +RHTRRPEVGDKFSSRHGQKGVCG
Sbjct: 858  YRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVCG 917

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TI+QQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPS
Sbjct: 918  TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 977

Query: 515  GHADKVEDISY------TLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHM 360
            GHAD+VE I +      TLVKHGFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHM
Sbjct: 978  GHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 1035


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1140 bits (2948), Expect = 0.0
 Identities = 574/813 (70%), Positives = 662/813 (81%), Gaps = 4/813 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K  VDK+ L+P FLKVRGLVKQH+DSFNYF+  +IKKI++AN  +    +PNI+L+Y +
Sbjct: 27   IKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRSILDPNIYLRYRD 86

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGN--QTTPEVKKGLVIGRM 2987
            +++ EP +  D   EKL PQ CRLSDRTYAAPI V IEYT G+  QT+   KK ++IGRM
Sbjct: 87   VHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIEYTTGSHGQTSVSTKKNVIIGRM 146

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRS  CVL GKDE EL++LGECPLDPGGYF+IKG EKVILIQEQLSKNRII+DTD K
Sbjct: 147  PIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDKK 206

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G V ASVTSST +TKSKT+  M+KEK+YL+LN F   +PIMVVM+AMGMESDQE+VQM+G
Sbjct: 207  GSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMIG 266

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYL--DGKVGSPSSTRSGNRKEGLARNILLDV 2453
            RDPR+S LLL SI+ECA  ++YTQ QAL++L  D  +  PS +     K   A +IL D+
Sbjct: 267  RDPRFSALLLPSIEECADLKLYTQHQALEFLESDKMLKMPSYSTGPVEKGARALSILRDI 326

Query: 2452 FLANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFED 2273
            FLANVPV   NFR KCIY AVM+RRMM+AILN D  DDKDYVGNKRLELSGQL+SLLFED
Sbjct: 327  FLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLELSGQLLSLLFED 386

Query: 2272 LFKSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQDIITNGLEKAISTGNWDLKRFKMHRK 2093
            LFK+MN  A   ++ +  +PSRS  LD   +I +D IT GLE+ +STGNWD+KRF+MHRK
Sbjct: 387  LFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSITMGLERTLSTGNWDVKRFRMHRK 446

Query: 2092 GVAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTK 1913
            G+ QV++RLS+I SLGHMT+ISPQFEK+RKVSGPRALQPSQ+GMLCPCDTPEGEACGL K
Sbjct: 447  GMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCDTPEGEACGLVK 506

Query: 1912 NLALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQR 1733
            NLALMTHVTTDEDE P+  LCY LGVE LE LS EELH  +SYL+  NGLILGKH+ PQR
Sbjct: 507  NLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNGLILGKHKSPQR 566

Query: 1732 FGKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMREL 1553
            F  A R+LRR+G+IGEFVSIFVN+KQRC+Y+ASDGGRVCRPLVIADKGVSRIKEHHMREL
Sbjct: 567  FANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMREL 626

Query: 1552 RDGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGV 1373
            RDGVR FD FL++GLIEYLDVNEENN LIALYE E   E        THIEIEPFTILGV
Sbjct: 627  RDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATPE-------TTHIEIEPFTILGV 679

Query: 1372 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIEL 1193
            CAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL R D +LYLLVYPQRPLLTT++IEL
Sbjct: 680  CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTRTIEL 739

Query: 1192 VKFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTS 1013
            V +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI +KK + I + Y N TS
Sbjct: 740  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAICQKYENGTS 799

Query: 1012 DIICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            D I KP+ +           MQILDDDG+AAPG
Sbjct: 800  DRIIKPQRQ-----GFEADKMQILDDDGMAAPG 827



 Score =  531 bits (1367), Expect = e-147
 Identities = 246/291 (84%), Positives = 270/291 (92%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            Y+ +   Y GPEGET V+DRV L SD N+ L IKF++RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 860  YKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEIGDKFSSRHGQKGVCG 919

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIVQQEDFPFSERGICPDLIMNPHG+PSRMT+GKMIELLG KAGVSCGRFHYGSAFGEPS
Sbjct: 920  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEPS 979

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHAD V+ IS TLVKHGFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 980  GHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHAR 1039

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV++TRQPTEGRSRNGGLR+GEMERDCLIAYGASM+I+ERLM+SSDP++VQVC KC
Sbjct: 1040 GSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKC 1099

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYN+KLKT  CSMCKNG+N+STMKLPYACKLLFQELQSMN+VPRLKL
Sbjct: 1100 GLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKL 1150


>ref|XP_006583558.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X2 [Glycine max]
          Length = 1021

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 568/813 (69%), Positives = 668/813 (82%), Gaps = 4/813 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K AVDKF LLP FLKVRGLVKQH+DSFNYF+  DIKKI++AND +V +R P+I+L++ N
Sbjct: 40   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIVASRYPHIYLRFLN 99

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLV--IGRM 2987
            + + +P + +D   E L+PQ CRLSD TYAAPI  D+EYT G+   P++K+ L   IGRM
Sbjct: 100  VGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIKRKLKVEIGRM 159

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL+G+DEAEL+KLGECPLDPGGYF+IKG EKVILIQEQLSKNRII+DTD K
Sbjct: 160  PIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDKK 219

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G +TASVTSST + K+KTV  M+KEK++LQLN+F K +P+MVVM+AMGMESDQE+ QMVG
Sbjct: 220  GNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMVG 279

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDPRYS LLL SI+EC   ++YT++QAL+YLD  V  P+ + +   KEG A + L DVFL
Sbjct: 280  RDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEKEGAAFSALRDVFL 339

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPVD  NFRPKCIY AVM+RR+MDAILN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 340  ANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 399

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQ--DIITNGLEKAISTGNWDLKRFKMHRK 2093
            KSM +      +K+ E+P ++   D    + +   IIT GLE+ +STGN+++KRF+M RK
Sbjct: 400  KSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKRFRMERK 459

Query: 2092 GVAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTK 1913
            G+ QVL RLSFI +LGHMTR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGE+CGL K
Sbjct: 460  GMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVK 519

Query: 1912 NLALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQR 1733
            NLALMTHVTTDE+E PL  LC +LGVE ++ LS EELH   S+LVIFNGLILGKHR P  
Sbjct: 520  NLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGLILGKHRRPLH 579

Query: 1732 FGKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMREL 1553
            F  A RKLRR+G+IGEFVS++VN+KQ C+Y+ASDGGRVCRPLVIADKG+SRIK+HHM+EL
Sbjct: 580  FATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQHHMKEL 639

Query: 1552 RDGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGV 1373
             DGVRTFDDFLR+GL+EYLDVNEENNALIALYE +   E        THIEIEPFTILGV
Sbjct: 640  MDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSE-------TTHIEIEPFTILGV 692

Query: 1372 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIEL 1193
             AGLIPYPHHNQSPRNTYQCAMGKQAMGN+A+NQL R D++LYLLVYPQRPLLTTK+IEL
Sbjct: 693  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTTKTIEL 752

Query: 1192 VKFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTS 1013
            V +DKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI +KK   I + + N+TS
Sbjct: 753  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKHSNDTS 812

Query: 1012 DIICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            D I +P    T D   R   MQILDDDGIAAPG
Sbjct: 813  DRILRPNR--TADTAGR---MQILDDDGIAAPG 840



 Score =  251 bits (641), Expect = 2e-63
 Identities = 118/149 (79%), Positives = 131/149 (87%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YR     + G  GE  V+DRV+LCSD ++ +CIKFL+RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 874  YRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQKGVCG 931

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIV QEDFPFSE+GICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGE S
Sbjct: 932  TIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 991

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSG 429
            GHADKVE IS TLV  GF+YSGKDF+YSG
Sbjct: 992  GHADKVETISETLVSKGFNYSGKDFIYSG 1020


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 568/813 (69%), Positives = 668/813 (82%), Gaps = 4/813 (0%)
 Frame = -2

Query: 3340 VKRAVDKFHLLPAFLKVRGLVKQHIDSFNYFIENDIKKILKANDRLVCARNPNIWLKYTN 3161
            +K AVDKF LLP FLKVRGLVKQH+DSFNYF+  DIKKI++AND +V +R P+I+L++ N
Sbjct: 40   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIVASRYPHIYLRFLN 99

Query: 3160 IYVDEPKVQVDYSDEKLSPQLCRLSDRTYAAPIKVDIEYTKGNQTTPEVKKGLV--IGRM 2987
            + + +P + +D   E L+PQ CRLSD TYAAPI  D+EYT G+   P++K+ L   IGRM
Sbjct: 100  VGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIKRKLKVEIGRM 159

Query: 2986 PIMLRSCRCVLNGKDEAELSKLGECPLDPGGYFIIKGNEKVILIQEQLSKNRIIVDTDSK 2807
            PIMLRSC CVL+G+DEAEL+KLGECPLDPGGYF+IKG EKVILIQEQLSKNRII+DTD K
Sbjct: 160  PIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDKK 219

Query: 2806 GRVTASVTSSTHETKSKTVFFMDKEKIYLQLNQFSKPIPIMVVMRAMGMESDQEIVQMVG 2627
            G +TASVTSST + K+KTV  M+KEK++LQLN+F K +P+MVVM+AMGMESDQE+ QMVG
Sbjct: 220  GNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMVG 279

Query: 2626 RDPRYSTLLLASIQECASERIYTQKQALDYLDGKVGSPSSTRSGNRKEGLARNILLDVFL 2447
            RDPRYS LLL SI+EC   ++YT++QAL+YLD  V  P+ + +   KEG A + L DVFL
Sbjct: 280  RDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEKEGAAFSALRDVFL 339

Query: 2446 ANVPVDNGNFRPKCIYAAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLVSLLFEDLF 2267
            ANVPVD  NFRPKCIY AVM+RR+MDAILN D  DDKDYVGNKRLELSGQL+SLLFEDLF
Sbjct: 340  ANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLF 399

Query: 2266 KSMNSYASEFVNKVYEQPSRSGPLDFVHHIKQ--DIITNGLEKAISTGNWDLKRFKMHRK 2093
            KSM +      +K+ E+P ++   D    + +   IIT GLE+ +STGN+++KRF+M RK
Sbjct: 400  KSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKRFRMERK 459

Query: 2092 GVAQVLSRLSFIASLGHMTRISPQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEACGLTK 1913
            G+ QVL RLSFI +LGHMTR+SPQFEK+RKVSGPRALQPSQWGMLCPCDTPEGE+CGL K
Sbjct: 460  GMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVK 519

Query: 1912 NLALMTHVTTDEDEGPLKLLCYNLGVEALESLSGEELHAQSSYLVIFNGLILGKHRYPQR 1733
            NLALMTHVTTDE+E PL  LC +LGVE ++ LS EELH   S+LVIFNGLILGKHR P  
Sbjct: 520  NLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGLILGKHRRPLH 579

Query: 1732 FGKAARKLRRSGEIGEFVSIFVNDKQRCIYVASDGGRVCRPLVIADKGVSRIKEHHMREL 1553
            F  A RKLRR+G+IGEFVS++VN+KQ C+Y+ASDGGRVCRPLVIADKG+SRIK+HHM+EL
Sbjct: 580  FATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQHHMKEL 639

Query: 1552 RDGVRTFDDFLREGLIEYLDVNEENNALIALYEFENEKEEDVSKSLITHIEIEPFTILGV 1373
             DGVRTFDDFLR+GL+EYLDVNEENNALIALYE +   E        THIEIEPFTILGV
Sbjct: 640  MDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSE-------TTHIEIEPFTILGV 692

Query: 1372 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNLAYNQLLRTDTILYLLVYPQRPLLTTKSIEL 1193
             AGLIPYPHHNQSPRNTYQCAMGKQAMGN+A+NQL R D++LYLLVYPQRPLLTTK+IEL
Sbjct: 693  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTTKTIEL 752

Query: 1192 VKFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIAIKKKTVIKESYINNTS 1013
            V +DKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI +KK   I + + N+TS
Sbjct: 753  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKHSNDTS 812

Query: 1012 DIICKPEMELTKDVFVRKSTMQILDDDGIAAPG 914
            D I +P    T D   R   MQILDDDGIAAPG
Sbjct: 813  DRILRPNR--TADTAGR---MQILDDDGIAAPG 840



 Score =  513 bits (1320), Expect = e-142
 Identities = 241/291 (82%), Positives = 265/291 (91%)
 Frame = -1

Query: 875  YRPTNAFYDGPEGETTVIDRVILCSDTNDKLCIKFLVRHTRRPEVGDKFSSRHGQKGVCG 696
            YR     + G  GE  V+DRV+LCSD ++ +CIKFL+RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 874  YRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQKGVCG 931

Query: 695  TIVQQEDFPFSERGICPDLIMNPHGYPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPS 516
            TIV QEDFPFSE+GICPDLIMNPHG+PSRMT+GKMIELLGGKAGVSCGRFHYGSAFGE S
Sbjct: 932  TIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERS 991

Query: 515  GHADKVEDISYTLVKHGFSYSGKDFLYSGITGFPLQAYIFMGPIYYQKLKHMVLDKMHAR 336
            GHADKVE IS TLV  GF+YSGKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 992  GHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1051

Query: 335  AKGPRVLLTRQPTEGRSRNGGLRLGEMERDCLIAYGASMMIFERLMLSSDPYQVQVCSKC 156
              GPRV+LTRQPTEGR+RNGGLR+GEMERDCLIAYGASM+I+ERLMLSSDP++VQVC+ C
Sbjct: 1052 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTAC 1111

Query: 155  GLLGYYNHKLKTAFCSMCKNGDNVSTMKLPYACKLLFQELQSMNVVPRLKL 3
            GLLGYYNHKLKT  CS CKNGDN+STMKLPYACKL+ QELQSMN+VPRLKL
Sbjct: 1112 GLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKL 1162