BLASTX nr result

ID: Stemona21_contig00003673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00003673
         (323 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cy...    47   3e-06
emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]    47   3e-06
ref|XP_006406839.1| hypothetical protein EUTSA_v10020474mg [Eutr...    44   3e-06
emb|CBI36032.3| unnamed protein product [Vitis vinifera]               47   3e-06
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...    44   8e-06
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]    44   8e-06

>ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Vitis vinifera]
          Length = 630

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = +3

Query: 111 DHFGFCGKIVYTKVVRERNGVSRGFGFV--SSNEEAKLTASSLNG 239
           +HF  CG+I   KV+R  +G+S+GFGFV  S++EEA+   ++LNG
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNG 371



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +1

Query: 1   ERAEMLKQQFEARR----GLHPSSVYVKNLDASVDEKK 102
           ER E+LK + E           S++YVKNLDASVD+ K
Sbjct: 287 ERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDK 324


>emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
          Length = 555

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = +3

Query: 111 DHFGFCGKIVYTKVVRERNGVSRGFGFV--SSNEEAKLTASSLNG 239
           +HF  CG+I   KV+R  +G+S+GFGFV  S++EEA+   ++LNG
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNG 371



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +1

Query: 1   ERAEMLKQQFEARR----GLHPSSVYVKNLDASVDEKK 102
           ER E+LK + E           S++YVKNLDASVD+ K
Sbjct: 287 ERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDK 324


>ref|XP_006406839.1| hypothetical protein EUTSA_v10020474mg [Eutrema salsugineum]
           gi|557107985|gb|ESQ48292.1| hypothetical protein
           EUTSA_v10020474mg [Eutrema salsugineum]
          Length = 539

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +3

Query: 117 FGFCGKIVYTKVVRERNGVSRGFGFV--SSNEEAKLTASSLNG 239
           FG CGK+V  KV+R  NG  +GFGFV  S+ EE++     LNG
Sbjct: 316 FGSCGKVVSAKVMRHENGKCKGFGFVGYSNLEESQKAKRELNG 358



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +1

Query: 1   ERAEMLKQQFEARRGLHPSSVYVKNLDASVDEKK 102
           ER EMLKQ++         S+YVKNL  SVDEKK
Sbjct: 279 ERMEMLKQKYRDNFTAK-FSLYVKNLSESVDEKK 311


>emb|CBI36032.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = +3

Query: 111 DHFGFCGKIVYTKVVRERNGVSRGFGFV--SSNEEAKLTASSLNG 239
           +HF  CG+I   KV+R  +G+S+GFGFV  S++EEA+   ++LNG
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNG 371



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +1

Query: 1   ERAEMLKQQFEARR----GLHPSSVYVKNLDASVDEKK 102
           ER E+LK + E           S++YVKNLDASVD+ K
Sbjct: 287 ERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDK 324


>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score = 44.3 bits (103), Expect(2) = 8e-06
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = +3

Query: 111 DHFGFCGKIVYTKVVRERNGVSRGFGFV--SSNEEAKLTASSLNG 239
           +HF  CGKI   K++R++ G+S+GFGFV  S+ +EA    ++ +G
Sbjct: 312 EHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHG 356



 Score = 30.8 bits (68), Expect(2) = 8e-06
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 5/37 (13%)
 Frame = +1

Query: 1   ERAEMLKQQFEARRG-----LHPSSVYVKNLDASVDE 96
           ER ++L++QFE +R         S+VYVKN+D +V++
Sbjct: 271 EREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVND 307


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score = 44.3 bits (103), Expect(2) = 8e-06
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = +3

Query: 111 DHFGFCGKIVYTKVVRERNGVSRGFGFV--SSNEEAKLTASSLNG 239
           +HF  CGKI   K++R++ G+S+GFGFV  S+ +EA    ++ +G
Sbjct: 332 EHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHG 376



 Score = 30.8 bits (68), Expect(2) = 8e-06
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 5/37 (13%)
 Frame = +1

Query: 1   ERAEMLKQQFEARRG-----LHPSSVYVKNLDASVDE 96
           ER ++L++QFE +R         S+VYVKN+D +V++
Sbjct: 291 EREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVND 327