BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00003548
         (1023 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containi...   173   4e-75
ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] g...   173   3e-74
gb|EEC76135.1| hypothetical protein OsI_13421 [Oryza sativa Indi...   167   1e-73
emb|CBI35029.3| unnamed protein product [Vitis vinifera]              154   1e-71
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat...   154   1e-71
gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily p...   157   1e-71
gb|EAY88621.1| hypothetical protein OsI_10098 [Oryza sativa Indi...   172   7e-71
gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [...   144   3e-69
gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]     157   5e-68
ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Caps...   144   9e-68
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat...   154   2e-67
ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-67
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ...   144   3e-67
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat...   154   4e-67
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr...   143   8e-67
ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutr...   148   1e-66
ref|XP_002517451.1| pentatricopeptide repeat-containing protein,...   151   3e-66
ref|NP_189507.2| pentatricopeptide repeat-containing protein [Ar...   142   4e-65
ref|XP_006838670.1| hypothetical protein AMTR_s00002p00243230 [A...   152   4e-57
gb|EEE59880.1| hypothetical protein OsJ_12480 [Oryza sativa Japo...   160   1e-53

>ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g28660-like [Oryza brachyantha]
          Length = 493

 Score =  173 bits (438), Expect(3) = 4e-75
 Identities = 83/143 (58%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
 Frame = +2

Query: 227 DDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKM- 394
           D  V SALVS+YA    + + V+VFD MPERN ++W  M+G FA HG+ +E++ CL +M 
Sbjct: 236 DAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEEAVACLDRMA 295

Query: 395 QEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGR 574
           +ED  RPDGV V   L+ACAHAG V++GL +L  +   Y +APGHEHYSC VDMLCRVGR
Sbjct: 296 REDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYSCTVDMLCRVGR 355

Query: 575 LEDAVAMIRGMPMRPLASMWGSM 643
           LEDAVA+I+ MPM PL S+WGS+
Sbjct: 356 LEDAVALIKTMPMAPLTSVWGSV 378



 Score = 95.1 bits (235), Expect(3) = 4e-75
 Identities = 52/98 (53%), Positives = 71/98 (72%)
 Frame = +3

Query: 645 ANVKLAELVVKELRLITTEDGDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           ANV+LAE+   EL  +    G D+G +V +SN YL+AN+++DARRV KLI SRGI+K PA
Sbjct: 386 ANVELAEVAAGELAKLGA--GADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIRKVPA 443

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLLMDYLG 938
            S +EVDGE++SFVA  Q +P ++EI  +L LL D +G
Sbjct: 444 YSAVEVDGEVSSFVADDQAHPQRVEIWGVLGLLSDQMG 481



 Score = 62.8 bits (151), Expect(3) = 4e-75
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  +A+ +D++     R G++++ L  FR M A    PD   +TTA+ ACA AGALE G 
Sbjct: 161 PRREAIHYDLVIGAYARAGMAAEGLGGFRAMFADGVLPDAVVLTTAIAACAQAGALECGE 220

Query: 183 WIHHYLERKEP 215
           W+H Y+ER  P
Sbjct: 221 WMHRYVERTAP 231



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYASISETVK-VFDTMPERNTHMWSAMIGGFATHGLVQESIRC 382
           +  +F  D  V +AL+ ++A   +  + VFD +P R    +  +IG +A  G+  E +  
Sbjct: 128 RNGLFPSDHYVTTALLQLHAPRPDDARRVFDELPRREAIHYDLVIGAYARAGMAAEGLGG 187

Query: 383 LAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHY-SCAVDML 559
              M  D   PD V++   +AACA AG ++ G  +   +E       G     S  V M 
Sbjct: 188 FRAMFADGVLPDAVVLTTAIAACAQAGALECGEWMHRYVERTAPGLLGDAFVGSALVSMY 247

Query: 560 CRVGRLEDAVAMIRGMPMRPLASMWGSM 643
            + G LE AV +  GMP R    +WG+M
Sbjct: 248 AKCGCLEQAVRVFDGMPERN-DYVWGTM 274


>ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group]
           gi|22773237|gb|AAN06843.1| Hypothetical protein [Oryza
           sativa Japonica Group] gi|108706287|gb|ABF94082.1|
           pentatricopeptide, putative, expressed [Oryza sativa
           Japonica Group] gi|125584986|gb|EAZ25650.1| hypothetical
           protein OsJ_09480 [Oryza sativa Japonica Group]
           gi|255674223|dbj|BAH92004.1| Os03g0158900 [Oryza sativa
           Japonica Group]
          Length = 490

 Score =  173 bits (438), Expect(3) = 3e-74
 Identities = 85/149 (57%), Positives = 109/149 (73%), Gaps = 5/149 (3%)
 Frame = +2

Query: 227 DDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKM- 394
           D  V SALVS+YA    + + V+VFD MPERN ++W  M+G FA HG+ +E++ CL +M 
Sbjct: 234 DAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEEAVSCLDRMA 293

Query: 395 QEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGR 574
           +ED  RPDGV V   L+ACAHAG V++GL +L  +   Y +APGHEHY+C VDMLCRVGR
Sbjct: 294 REDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYACTVDMLCRVGR 353

Query: 575 LEDAVAMIRGMPMRPLASMWGS-MRECQT 658
           LEDAVA+I  MPM PLAS+WGS +  C+T
Sbjct: 354 LEDAVALIETMPMAPLASVWGSVLTGCRT 382



 Score = 93.2 bits (230), Expect(3) = 3e-74
 Identities = 50/100 (50%), Positives = 71/100 (71%)
 Frame = +3

Query: 645 ANVKLAELVVKELRLITTEDGDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           ANV+LAE+   EL  +    G D+G +V +SN YL++N+++DARRV KLI SRGI+K PA
Sbjct: 384 ANVELAEVAAAELGKL----GADEGVYVQLSNIYLDSNRKDDARRVRKLIGSRGIRKVPA 439

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLLMDYLGDQ 944
            S +EVDG + SFVA  Q +P ++EI  +L LL D +G++
Sbjct: 440 YSAVEVDGVVRSFVADDQAHPQRVEIWEVLGLLADQMGEE 479



 Score = 62.0 bits (149), Expect(3) = 3e-74
 Identities = 28/71 (39%), Positives = 41/71 (57%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  +A+ +D++     R G++ + L +FR M      PD   +TTA+ ACA AGALE G 
Sbjct: 159 PRREAIHYDLVIGAYTRTGMAGEGLGVFRAMFVDGVAPDAVVLTTAIAACAQAGALECGE 218

Query: 183 WIHHYLERKEP 215
           W+H Y+E   P
Sbjct: 219 WVHRYVEASAP 229



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVY---ASISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESI 376
           K   F  D  V +AL+ +    A   +  +VFD +P R    +  +IG +   G+  E +
Sbjct: 124 KNGHFPSDHYVTTALLQLQLHAARPDDARRVFDELPRREAIHYDLVIGAYTRTGMAGEGL 183

Query: 377 RCLAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHY-SCAVD 553
                M  D   PD V++   +AACA AG ++ G  +   +EA      G     S  V 
Sbjct: 184 GVFRAMFVDGVAPDAVVLTTAIAACAQAGALECGEWVHRYVEASAPWLLGDAFVGSALVS 243

Query: 554 MLCRVGRLEDAVAMIRGMPMRPLASMWGSM 643
           M  + G LE AV +  GMP R    +WG+M
Sbjct: 244 MYAKCGCLEQAVRVFDGMPERN-DYVWGTM 272


>gb|EEC76135.1| hypothetical protein OsI_13421 [Oryza sativa Indica Group]
          Length = 406

 Score =  167 bits (424), Expect(3) = 1e-73
 Identities = 84/149 (56%), Positives = 106/149 (71%), Gaps = 5/149 (3%)
 Frame = +2

Query: 227 DDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKM- 394
           D  V SALVS+YA    + + V+VFD MPERN ++W  M+G FA HG  +E++ CL +M 
Sbjct: 148 DAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGRAEEAVSCLDRMA 207

Query: 395 QEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGR 574
           +ED  RPDGV V   L+ACAHAG V +GL +L  +   Y +APGHEHY+C VDMLCRV R
Sbjct: 208 REDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMSRRYGVAPGHEHYACTVDMLCRVDR 267

Query: 575 LEDAVAMIRGMPMRPLASMWGS-MRECQT 658
           LEDAVA+I  MPM PLAS+WGS +  C+T
Sbjct: 268 LEDAVALIETMPMAPLASVWGSVLTGCRT 296



 Score = 91.7 bits (226), Expect(3) = 1e-73
 Identities = 51/100 (51%), Positives = 70/100 (70%)
 Frame = +3

Query: 645 ANVKLAELVVKELRLITTEDGDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           ANV+LAE+   EL  +    G D G +V +SN YL+AN+++DARRV KLI SRGI+K PA
Sbjct: 298 ANVELAEVAAAELGKLGA--GPDKGVYVQLSNIYLDANRKDDARRVRKLIGSRGIRKVPA 355

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLLMDYLGDQ 944
            S +EVDG ++SFVA  Q +P ++EI  +L LL D +G +
Sbjct: 356 YSEVEVDGVVSSFVADDQAHPQRVEIWEVLRLLADQMGGE 395



 Score = 66.6 bits (161), Expect(3) = 1e-73
 Identities = 30/71 (42%), Positives = 44/71 (61%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  +A+ +D++     R G++++ L +FR M      PD   +TTA+TACA AGALE G 
Sbjct: 73  PRREAIHYDLVIGAYARAGMAAEGLGVFRAMFMDGVAPDAVVLTTAITACAQAGALECGE 132

Query: 183 WIHHYLERKEP 215
           W+H Y+ER  P
Sbjct: 133 WVHRYVERSAP 143



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYASISETVK-VFDTMPERNTHMWSAMIGGFATHGLVQESIRC 382
           K  +F  D  V +AL+ ++A+  +  + VFD +P R    +  +IG +A  G+  E +  
Sbjct: 40  KNGLFPSDHYVATALLQLHAARPDDARRVFDELPRREAIHYDLVIGAYARAGMAAEGLGV 99

Query: 383 LAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHY-SCAVDML 559
              M  D   PD V++   + ACA AG ++ G  +   +E       G     S  V M 
Sbjct: 100 FRAMFMDGVAPDAVVLTTAITACAQAGALECGEWVHRYVERSAPGLLGDAFVGSALVSMY 159

Query: 560 CRVGRLEDAVAMIRGMPMRPLASMWGSM 643
            + G LE AV +  GMP R    +WG+M
Sbjct: 160 AKCGCLEQAVRVFDGMPERN-DYVWGTM 186


>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score =  154 bits (390), Expect(3) = 1e-71
 Identities = 75/144 (52%), Positives = 107/144 (74%), Gaps = 5/144 (3%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           +ALV +YA    I  +V+VF+ M +RN   WSAMIGGFA HG V+++++CL +MQ ED  
Sbjct: 247 TALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGL 306

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           RPDGV++  V+ ACAHAGL +EG  +L ++EA Y + P HEHYSC VD+LCR G+L++A+
Sbjct: 307 RPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEAL 366

Query: 590 AMIRGMPMRPLASMWGSMRE-CQT 658
            +IR MPM+P A++WG++   C+T
Sbjct: 367 KLIRRMPMKPRAAVWGALLSGCRT 390



 Score = 84.7 bits (208), Expect(3) = 1e-71
 Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG-DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV LAEL  +EL ++   DG ++DG++V +SN YL A K EDA R+ ++I  + IK  P 
Sbjct: 393 NVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPG 452

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           CS+IEV+GE+N FV+    +P   +IH MLDL+
Sbjct: 453 CSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLV 485



 Score = 79.7 bits (195), Expect(3) = 1e-71
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  D VQW+VL N  +R GL+ +AL  FR+ML +  EPDEF +TTAL  CA  GAL+QG 
Sbjct: 168 PNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGK 227

Query: 183 WIHHYLERKE 212
           WIH Y+ +++
Sbjct: 228 WIHEYVTKRK 237



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYA---SISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESI 376
           K  V   D +V +ALV  YA   ++ +  K+FD +P  +   W+ ++ G+   GL  E++
Sbjct: 133 KNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEAL 192

Query: 377 RCLAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDM 556
                M      PD   +   L  CA  G +++G  I   +     L       +  VDM
Sbjct: 193 NAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDM 252

Query: 557 LCRVGRLEDAVAMIRGMPMRPLASMWGSM 643
             + G ++ +V +  GM  R + S W +M
Sbjct: 253 YAKCGCIDRSVEVFEGMTKRNVFS-WSAM 280


>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g28640-like [Vitis vinifera]
          Length = 511

 Score =  154 bits (390), Expect(3) = 1e-71
 Identities = 75/144 (52%), Positives = 107/144 (74%), Gaps = 5/144 (3%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           +ALV +YA    I  +V+VF+ M +RN   WSAMIGGFA HG V+++++CL +MQ ED  
Sbjct: 247 TALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGL 306

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           RPDGV++  V+ ACAHAGL +EG  +L ++EA Y + P HEHYSC VD+LCR G+L++A+
Sbjct: 307 RPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEAL 366

Query: 590 AMIRGMPMRPLASMWGSMRE-CQT 658
            +IR MPM+P A++WG++   C+T
Sbjct: 367 KLIRRMPMKPRAAVWGALLSGCRT 390



 Score = 84.7 bits (208), Expect(3) = 1e-71
 Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG-DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV LAEL  +EL ++   DG ++DG++V +SN YL A K EDA R+ ++I  + IK  P 
Sbjct: 393 NVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPG 452

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           CS+IEV+GE+N FV+    +P   +IH MLDL+
Sbjct: 453 CSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLV 485



 Score = 79.7 bits (195), Expect(3) = 1e-71
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  D VQW+VL N  +R GL+ +AL  FR+ML +  EPDEF +TTAL  CA  GAL+QG 
Sbjct: 168 PNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGK 227

Query: 183 WIHHYLERKE 212
           WIH Y+ +++
Sbjct: 228 WIHEYVTKRK 237



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYA---SISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESI 376
           K  V   D +V +ALV  YA   ++ +  K+FD +P  +   W+ ++ G+   GL  E++
Sbjct: 133 KNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAPEAL 192

Query: 377 RCLAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDM 556
                M      PD   +   L  CA  G +++G  I   +     L       +  VDM
Sbjct: 193 NAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDM 252

Query: 557 LCRVGRLEDAVAMIRGMPMRPLASMWGSM 643
             + G ++ +V +  GM  R + S W +M
Sbjct: 253 YAKCGCIDRSVEVFEGMTKRNVFS-WSAM 280


>gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 499

 Score =  157 bits (398), Expect(3) = 1e-71
 Identities = 73/144 (50%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQEDKFR 412
           +ALV +YA    +   V+VF+ M +RN + W+AMIGGFA HG  +++I C  +MQ D  R
Sbjct: 255 TALVDMYAKCGCLDLAVEVFEGMSKRNVYSWAAMIGGFAVHGHARKAIHCFERMQNDGIR 314

Query: 413 PDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAVA 592
           PDGV++  VL AC HAGL +EGL +L ++E  Y + P HEHYSC VD+LCR G+ ++A+ 
Sbjct: 315 PDGVVLLGVLTACTHAGLAEEGLFLLNNMEGQYRIVPKHEHYSCVVDLLCRTGKFDEALK 374

Query: 593 MIRGMPMRPLASMWGSMRECQTCR 664
           +IR MPMRPLAS+WG++    +CR
Sbjct: 375 LIRRMPMRPLASVWGAL--LNSCR 396



 Score = 84.7 bits (208), Expect(3) = 1e-71
 Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDGDD-DGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV+LAEL VKEL  +   DGD+ D + V +SN Y +A K ED  R+ ++I  RG+KK P 
Sbjct: 400 NVQLAELAVKELLELEDCDGDEEDAALVQLSNIYFSAQKSEDGHRIRRMIGDRGLKKAPG 459

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           CS+IEVDG +  FV+    +PL  +IH +L LL
Sbjct: 460 CSMIEVDGRMTEFVSGDISHPLHSQIHTILRLL 492



 Score = 76.6 bits (187), Expect(3) = 1e-71
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = +3

Query: 12  DAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWIH 191
           D V+W+VL +   RC L + AL +F+++L    +PDEF +TTALTACA  G+L +G WIH
Sbjct: 178 DVVKWNVLMSGLARCRLGTQALSVFKELLVFGIQPDEFCLTTALTACAQNGSLREGKWIH 237

Query: 192 HYLERKE 212
            YL ++E
Sbjct: 238 EYLRKRE 244


>gb|EAY88621.1| hypothetical protein OsI_10098 [Oryza sativa Indica Group]
          Length = 313

 Score =  172 bits (437), Expect(3) = 7e-71
 Identities = 85/149 (57%), Positives = 109/149 (73%), Gaps = 5/149 (3%)
 Frame = +2

Query: 227 DDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKM- 394
           D  V SALVS+YA    + + V+VFD MPERN ++W  M+G FA HG+ +E++ CL +M 
Sbjct: 57  DAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEEAVLCLDRMA 116

Query: 395 QEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGR 574
           +ED  RPDGV V   L+ACAHAG V++GL +L  +   Y +APGHEHY+C VDMLCRVGR
Sbjct: 117 REDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYACTVDMLCRVGR 176

Query: 575 LEDAVAMIRGMPMRPLASMWGS-MRECQT 658
           LEDAVA+I  MPM PLAS+WGS +  C+T
Sbjct: 177 LEDAVALIETMPMAPLASVWGSVLTGCRT 205



 Score = 92.0 bits (227), Expect(3) = 7e-71
 Identities = 50/100 (50%), Positives = 70/100 (70%)
 Frame = +3

Query: 645 ANVKLAELVVKELRLITTEDGDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           ANV+LAE+   EL  +    G D+G +V +SN YL++N+++DARRV KLI SRGI+K PA
Sbjct: 207 ANVELAEVAAAELGKL----GADEGVYVQLSNIYLDSNRKDDARRVRKLIGSRGIRKVPA 262

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLLMDYLGDQ 944
            S +EVDG + SFVA  Q +P ++EI  +L LL D +G +
Sbjct: 263 YSAVEVDGVVRSFVADDQAHPQRVEIWEVLGLLADQMGGE 302



 Score = 52.0 bits (123), Expect(3) = 7e-71
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +3

Query: 60  LSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWIHHYLERKEP 215
           ++ + L +FR M      PD   +TTA+ ACA AGALE G W+H Y+E   P
Sbjct: 1   MAGEGLGVFRAMFVDGVAPDAVVLTTAIAACAQAGALECGEWVHRYVEASAP 52


>gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
          Length = 541

 Score =  144 bits (362), Expect(3) = 3e-69
 Identities = 68/138 (49%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           +ALV +YA    I   V+ F+ MP+RN   W+AMIGGFA HG    +I  L +MQ +D  
Sbjct: 240 TALVDMYAKCGCIDLAVEAFEGMPKRNVVSWAAMIGGFAAHGCATNAIHSLERMQVDDGL 299

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           RPDGV++  VL AC HAGL+++G  +L +++  Y + P HEHYSC +D+LC+ GRL +A+
Sbjct: 300 RPDGVVLLVVLMACTHAGLLEKGKLLLDNMKTQYGIVPKHEHYSCVIDLLCKAGRLNEAL 359

Query: 590 AMIRGMPMRPLASMWGSM 643
            +IR MPM+PLAS+WG++
Sbjct: 360 KLIRKMPMKPLASVWGAL 377



 Score = 85.1 bits (209), Expect(3) = 3e-69
 Identities = 38/69 (55%), Positives = 48/69 (69%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  D +QW+VL N  +RCGL+S+AL +FRDML    EPD F V T L ACAH GAL QG 
Sbjct: 161 PERDVIQWNVLMNGYVRCGLASEALKVFRDMLVTGFEPDNFCVATGLAACAHLGALRQGK 220

Query: 183 WIHHYLERK 209
           WI  Y++++
Sbjct: 221 WIDEYVKKR 229



 Score = 82.4 bits (202), Expect(3) = 3e-69
 Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTE-DGDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV LAEL VKEL  +  +  G++ G++V +SN YL A + EDA R+ K+I   GIKKTP 
Sbjct: 386 NVDLAELAVKELLQLENDVRGEEVGAYVQLSNIYLGARRGEDAIRIRKMIGESGIKKTPG 445

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLLM 926
           CS+IEVDG++N FV+    +  Q  I  MLDL++
Sbjct: 446 CSMIEVDGKVNEFVSGDVSHSHQAWICAMLDLIL 479



 Score = 82.0 bits (201), Expect(2) = 5e-14
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESI 376
           K  +F  D +V +ALV +YA    + ++ KVFD +PER+   W+ ++ G+   GL  E++
Sbjct: 126 KNGLFLVDAHVQTALVRLYAECKVLDDSKKVFDEIPERDVIQWNVLMNGYVRCGLASEAL 185

Query: 377 RCLAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDM 556
           +    M    F PD   V   LAACAH G +++G  I   ++    L       +  VDM
Sbjct: 186 KVFRDMLVTGFEPDNFCVATGLAACAHLGALRQGKWIDEYVKKRTGLKSDVFIGTALVDM 245

Query: 557 LCRVGRLEDAVAMIRGMPMRPLASMWGSM 643
             + G ++ AV    GMP R + S W +M
Sbjct: 246 YAKCGCIDLAVEAFEGMPKRNVVS-WAAM 273



 Score = 23.1 bits (48), Expect(2) = 5e-14
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 114 PDEFAVTTALTACAHAGALEQGVWIHHYL 200
           PD +     + ACA+   L  G  IH+++
Sbjct: 96  PDNYTFNFVILACANCSWLVSGRQIHNWV 124


>gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]
          Length = 487

 Score =  157 bits (396), Expect(3) = 5e-68
 Identities = 78/151 (51%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
 Frame = +2

Query: 203 EKGAVFCCDDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQES 373
           EK   F  D  V +ALV +Y     +   V+VF+ MP RN   W+A+IGGFA HG V E+
Sbjct: 212 EKREGFESDVFVGTALVDMYTKCGCLDMAVEVFEKMPTRNAFSWAAIIGGFAVHGQVMEA 271

Query: 374 IRCLAKMQ-EDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAV 550
           IRCL +MQ +D  +PDGV++  VL AC HAGL KEG  +L ++E+ Y + P HEHYSC V
Sbjct: 272 IRCLERMQADDGLKPDGVVLLGVLTACTHAGLQKEGQLLLHNMESQYGILPKHEHYSCVV 331

Query: 551 DMLCRVGRLEDAVAMIRGMPMRPLASMWGSM 643
           D+LCR G+L +A  +IR MPM+PLAS+WG++
Sbjct: 332 DLLCRAGKLREAYQLIRRMPMKPLASVWGAL 362



 Score = 76.3 bits (186), Expect(3) = 5e-68
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +3

Query: 651 VKLAELVVKELRLITTEDG-DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPAC 827
           V LAEL VKEL L+  ED    DG +V +SN YL A + EDA  + K+I  +GI+KTP C
Sbjct: 372 VDLAELAVKELVLLENEDKRGQDGVYVQLSNIYLAAQRTEDAVLIRKMIGDKGIRKTPGC 431

Query: 828 SVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           S +EVDG +N FV+    +  Q +I  ML LL
Sbjct: 432 STVEVDGRVNEFVSGDIVHSCQAKICVMLYLL 463



 Score = 73.9 bits (180), Expect(3) = 5e-68
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +3

Query: 12  DAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWIH 191
           D  QW+ L +  +RC L+S+AL +FRDML    E DE    TALTACA +GAL  G WIH
Sbjct: 149 DLFQWNALMDGYIRCSLASEALGVFRDMLKFGVELDECCAVTALTACAQSGALWWGKWIH 208

Query: 192 HYLERKE 212
            Y+E++E
Sbjct: 209 EYIEKRE 215


>ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Capsella rubella]
           gi|482559645|gb|EOA23836.1| hypothetical protein
           CARUB_v10017051mg [Capsella rubella]
          Length = 507

 Score =  144 bits (364), Expect(3) = 9e-68
 Identities = 69/146 (47%), Positives = 102/146 (69%), Gaps = 5/146 (3%)
 Frame = +2

Query: 236 VVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-ED 403
           V +ALV +YA    I   V+VF+ +  RN   W+A+IGG+A +G  +E+I CL +M+ ED
Sbjct: 259 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAREAIMCLDRMERED 318

Query: 404 KFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLED 583
             +PD V++  VLAACAH G ++EG  +L ++E+ Y + P HEHYSC VD++CR GRL+ 
Sbjct: 319 AIKPDSVVLLGVLAACAHGGFLQEGRSMLDNMESRYGITPKHEHYSCIVDLMCRAGRLDG 378

Query: 584 AVAMIRGMPMRPLASMWGS-MRECQT 658
           A+ +I  MPM+PLAS+WG+ +  C+T
Sbjct: 379 ALDLIEKMPMKPLASVWGALLNGCRT 404



 Score = 94.0 bits (232), Expect(3) = 9e-68
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P PD V+WDVL N  +RCGL S+ L +FR+ML    EPDEF+VTTALTACA  GAL QG 
Sbjct: 182 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVRGIEPDEFSVTTALTACAQVGALAQGK 241

Query: 183 WIHHYLERKE 212
           WIH ++++K+
Sbjct: 242 WIHEFVKKKK 251



 Score = 67.8 bits (164), Expect(3) = 9e-68
 Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDGDDD-GSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV+L EL VK L  +   + D++  + V +SN Y +  +  +A ++  +I+ +GIKK P 
Sbjct: 407 NVELGELAVKNLLELEKGNVDEEEAALVQLSNIYFSVQRNPEASKIRGMIDQKGIKKAPG 466

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           CSV+EVDG++  FV+    +P  L+IH ++ LL
Sbjct: 467 CSVLEVDGDVTRFVSGDLSHPNLLQIHTVIHLL 499


>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g28640-like [Solanum tuberosum]
          Length = 512

 Score =  154 bits (390), Expect(3) = 2e-67
 Identities = 74/138 (53%), Positives = 101/138 (73%), Gaps = 4/138 (2%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           SALV +YA    I+   +VF++MP+RN H W+ MI GFA HG  + +I CL +MQ  D  
Sbjct: 264 SALVDMYAKCGCINMASEVFESMPKRNKHSWATMIRGFAVHGRPELAISCLERMQVADGL 323

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           +PDGV++  VLAACAH+GL KEG  +L  +E+LY + P HEH+SC VD+LCR GRL+DA+
Sbjct: 324 KPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSCVVDLLCRAGRLDDAL 383

Query: 590 AMIRGMPMRPLASMWGSM 643
            +IR MPM+P AS+WG++
Sbjct: 384 KLIRRMPMKPRASVWGAL 401



 Score = 79.0 bits (193), Expect(3) = 2e-67
 Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG---DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKT 818
           NV LAEL VKE+ L+  EDG   ++D ++V +SN YL A + +DARR+ + I  RG++KT
Sbjct: 410 NVNLAELAVKEILLV--EDGNEAEEDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKT 467

Query: 819 PACSVIEVDGELNSFVASVQEYPLQLEIHRMLDL 920
           P  S IE+DG +N F++    +    +IH++LDL
Sbjct: 468 PGYSAIEIDGMINEFISGDVSHTCLADIHKVLDL 501



 Score = 72.0 bits (175), Expect(3) = 2e-67
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = +3

Query: 12  DAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWIH 191
           D +Q +VL +  L+ GL+ +AL +F+DML     PDE+ VTTAL ACA  GALEQG WIH
Sbjct: 188 DVIQCNVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIH 247

Query: 192 HYLERKE 212
            ++ + E
Sbjct: 248 EHVTKSE 254


>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g28660-like [Fragaria vesca subsp. vesca]
          Length = 501

 Score =  142 bits (358), Expect(3) = 3e-67
 Identities = 67/138 (48%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           +ALV +YA    I   V+ F+ M +RN   WSAMIG +  HG   E+I CL +MQ +D  
Sbjct: 255 TALVDMYAKCGCIDLAVEAFEGMGKRNVVSWSAMIGAYGVHGYATEAISCLERMQVDDGV 314

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           +PDGV++  VL AC H GL+++G  +L +++A Y + P HEHYSC +D+LC+ GRL DA 
Sbjct: 315 KPDGVVLLGVLTACNHGGLLEKGKALLDNMKAKYGIVPKHEHYSCVIDLLCKAGRLSDAF 374

Query: 590 AMIRGMPMRPLASMWGSM 643
            +IR MPM+PLAS+WG++
Sbjct: 375 ELIRRMPMKPLASVWGAL 392



 Score = 82.8 bits (203), Expect(3) = 3e-67
 Identities = 42/93 (45%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTED-GDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV LAE+ V++L  +  +D G++ G++V +SN YL A + EDA R+ K+I  +GIKKTP 
Sbjct: 401 NVDLAEIAVEQLLQVANDDRGEEVGAYVQLSNIYLGAQRSEDALRIRKMIGEKGIKKTPG 460

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           CS++EVDG++N FV+    +   ++I  MLDL+
Sbjct: 461 CSMLEVDGKVNEFVSGDVSHSHCVQICTMLDLI 493



 Score = 79.7 bits (195), Expect(3) = 3e-67
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  D VQW+V+ N  ++ GL+S+AL +F+DML    EPD F V T L ACAH GAL QG 
Sbjct: 176 PERDMVQWNVIMNGYVKRGLASEALRVFQDMLVRGFEPDGFCVATGLAACAHLGALWQGK 235

Query: 183 WIHHYLERKE 212
           WIH Y+ ++E
Sbjct: 236 WIHEYVRKRE 245



 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESI 376
           K  +   D +V +A+V +Y     + +  KVFD +PER+   W+ ++ G+   GL  E++
Sbjct: 141 KNGLVAADAHVQTAVVRLYVECGVLGDAHKVFDEIPERDMVQWNVIMNGYVKRGLASEAL 200

Query: 377 RCLAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDM 556
           R    M    F PDG  V   LAACAH G + +G  I   +     L       +  VDM
Sbjct: 201 RVFQDMLVRGFEPDGFCVATGLAACAHLGALWQGKWIHEYVRKREGLNSDVFIGTALVDM 260

Query: 557 LCRVGRLEDAVAMIRGMPMRPLASMWGSM 643
             + G ++ AV    GM  R + S W +M
Sbjct: 261 YAKCGCIDLAVEAFEGMGKRNVVS-WSAM 288


>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322958|gb|EFH53379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 399

 Score =  144 bits (363), Expect(3) = 3e-67
 Identities = 69/146 (47%), Positives = 103/146 (70%), Gaps = 5/146 (3%)
 Frame = +2

Query: 236 VVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-ED 403
           V +ALV +YA    I   V+VF+ +  RN   W+A+IGG+A +G  ++++ CL +M+ ED
Sbjct: 151 VGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAALIGGYAAYGYAKKAMTCLDRMERED 210

Query: 404 KFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLED 583
             +PD V++  VLAACAH G ++EG  +L ++EA Y + P HEHYSC VD++CR GRL+D
Sbjct: 211 GIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEARYGITPKHEHYSCIVDLMCRAGRLDD 270

Query: 584 AVAMIRGMPMRPLASMWGS-MRECQT 658
           A+ +I  MPM+PLAS+WG+ +  C+T
Sbjct: 271 ALDLIEKMPMKPLASVWGALLNGCRT 296



 Score = 94.0 bits (232), Expect(3) = 3e-67
 Identities = 42/69 (60%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P PD V+WDVL N  +RCGL S+ L +FR+ML    EPDEF+VTTALTACA  GAL QG 
Sbjct: 74  PKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVRGVEPDEFSVTTALTACAQVGALAQGK 133

Query: 183 WIHHYLERK 209
           WIH ++++K
Sbjct: 134 WIHEFVKKK 142



 Score = 66.6 bits (161), Expect(3) = 3e-67
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG---DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKT 818
           NV+L EL VK L  +  E G   +++ + V +SN Y +  +  +A +V  +IE RGI+KT
Sbjct: 299 NVELGELAVKNL--LDLEKGNAEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGIRKT 356

Query: 819 PACSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           P  SV+EVDG +  FV+    +P  L+IH ++ LL
Sbjct: 357 PGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 391


>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g28640-like [Solanum lycopersicum]
          Length = 487

 Score =  154 bits (389), Expect(3) = 4e-67
 Identities = 74/138 (53%), Positives = 101/138 (73%), Gaps = 4/138 (2%)
 Frame = +2

Query: 242 SALVSVYA---SISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           SALV +YA   SI+   +VF++MP RN H W+ MI GFA HG  + ++ CL +MQ  D  
Sbjct: 239 SALVDMYAKCGSINLASEVFESMPTRNKHSWATMIRGFAVHGRPELALSCLERMQVADGL 298

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           +PDGV++  VLAACAH+GL KEG  +L  +E+LY + P HEH+SC VD+LCR GRL+DA+
Sbjct: 299 KPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSCVVDLLCRAGRLDDAL 358

Query: 590 AMIRGMPMRPLASMWGSM 643
            +IR MPM+P AS+WG++
Sbjct: 359 KLIRRMPMKPRASVWGAL 376



 Score = 77.8 bits (190), Expect(3) = 4e-67
 Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG---DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKT 818
           NV LAEL VKE+ L+  EDG   ++D ++V +SN YL A + +DARR+ + I  RG++KT
Sbjct: 385 NVNLAELAVKEILLV--EDGNEAEEDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKT 442

Query: 819 PACSVIEVDGELNSFVASVQEYPLQLEIHRMLDL 920
           P  S IE+DG +N F++    +    +IH++LDL
Sbjct: 443 PGYSAIEIDGMVNEFISGDVSHICLADIHKVLDL 476



 Score = 72.0 bits (175), Expect(3) = 4e-67
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = +3

Query: 12  DAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWIH 191
           D +Q +VL +  L+ GL+ +AL +F+DML     PDE+ VTTAL ACA  GALEQG WIH
Sbjct: 163 DVIQCNVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIH 222

Query: 192 HYLERKE 212
            ++ + E
Sbjct: 223 EHVTKSE 229


>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g28640 gi|9294278|dbj|BAB02180.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643948|gb|AEE77469.1| putative pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  143 bits (361), Expect(3) = 8e-67
 Identities = 68/146 (46%), Positives = 102/146 (69%), Gaps = 5/146 (3%)
 Frame = +2

Query: 236 VVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-ED 403
           V +ALV +YA    I   V+VF  +  RN   W+A+IGG+A +G  ++++ CL +++ ED
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 315

Query: 404 KFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLED 583
             +PD V++  VLAACAH G ++EG  +L ++EA Y + P HEHYSC VD++CR GRL+D
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDD 375

Query: 584 AVAMIRGMPMRPLASMWGS-MRECQT 658
           A+ +I  MPM+PLAS+WG+ +  C+T
Sbjct: 376 ALNLIEKMPMKPLASVWGALLNGCRT 401



 Score = 93.6 bits (231), Expect(3) = 8e-67
 Identities = 42/69 (60%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P PD V+WDVL N  +RCGL S+ L +FR+ML    EPDEF+VTTALTACA  GAL QG 
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 238

Query: 183 WIHHYLERK 209
           WIH ++++K
Sbjct: 239 WIHEFVKKK 247



 Score = 66.2 bits (160), Expect(3) = 8e-67
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG---DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKT 818
           NV+L EL VK L  +  E G   +++ + V +SN Y +  +  +A +V  +IE RG++KT
Sbjct: 404 NVELGELAVKNL--LDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461

Query: 819 PACSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           P  SV+EVDG +  FV+    +P  L+IH ++ LL
Sbjct: 462 PGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496


>ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutrema salsugineum]
           gi|557091992|gb|ESQ32639.1| hypothetical protein
           EUTSA_v10005682mg [Eutrema salsugineum]
          Length = 505

 Score =  148 bits (374), Expect(3) = 1e-66
 Identities = 71/149 (47%), Positives = 104/149 (69%), Gaps = 5/149 (3%)
 Frame = +2

Query: 227 DDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ 397
           D  V +ALV +YA    I   ++VF+ +  RN   W+ +IGG+A +G  +++I CL +M+
Sbjct: 254 DIYVGTALVDMYAKCGCIETALEVFENLSRRNVFSWAVLIGGYAAYGYAKKAIMCLDQME 313

Query: 398 -EDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGR 574
            ED  +PD V++  VLAACAH G ++EG  +L ++EA Y + P HEHYSC VD++CR GR
Sbjct: 314 REDGIKPDSVVLLTVLAACAHGGFLQEGRALLDNMEARYGITPKHEHYSCIVDLICRAGR 373

Query: 575 LEDAVAMIRGMPMRPLASMWGS-MRECQT 658
           L+DAV +I GMPM+PLAS+WG+ +  C+T
Sbjct: 374 LDDAVDLIEGMPMKPLASVWGALLNGCRT 402



 Score = 88.2 bits (217), Expect(3) = 1e-66
 Identities = 42/70 (60%), Positives = 52/70 (74%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P PD V+WDVL N  +RCGL S+ L +FR+MLA   EPD+F+VTTALTACA  GAL QG 
Sbjct: 180 PHPDVVKWDVLMNGYVRCGLGSEGLHVFREMLARGTEPDKFSVTTALTACAQVGALAQGK 239

Query: 183 WIHHYLERKE 212
            IH  L++K+
Sbjct: 240 LIHKLLKKKK 249



 Score = 66.2 bits (160), Expect(3) = 1e-66
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDGDDD-GSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           NV+L EL VK L  +   + D++  + V +SN YL A +  +A  + ++I  +GI+K P 
Sbjct: 405 NVELGELAVKNLLDLEKGNADEEEAALVQLSNIYLIAQRNTEASNIRRMIGQKGIRKAPG 464

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           CSV+EVDG +  FV+    +   L+IH M+ LL
Sbjct: 465 CSVLEVDGNVTKFVSGDVSHQNLLQIHTMIHLL 497


>ref|XP_002517451.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543462|gb|EEF44993.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 428

 Score =  151 bits (381), Expect(3) = 3e-66
 Identities = 73/144 (50%), Positives = 104/144 (72%), Gaps = 5/144 (3%)
 Frame = +2

Query: 242 SALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-EDKF 409
           +ALV +YA    I+  V+VF+ MP+R+   W+AMIGG+A HG  +E+I  L +M  ED  
Sbjct: 169 TALVDMYAKCGWINMAVQVFEEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGL 228

Query: 410 RPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLEDAV 589
           RPDGV++  VL AC HAGL +EG  +L +++A Y + P HEHYSC VD+LCR GR ++A+
Sbjct: 229 RPDGVVLLGVLTACTHAGLQEEGRFLLDNMKARYGIVPRHEHYSCVVDLLCRAGRWDEAL 288

Query: 590 AMIRGMPMRPLASMWGS-MRECQT 658
           A+I+ MPM+PLAS+WG+ +  C+T
Sbjct: 289 ALIKRMPMKPLASVWGAVLSSCRT 312



 Score = 79.7 bits (195), Expect(3) = 3e-66
 Identities = 38/73 (52%), Positives = 47/73 (64%)
 Frame = +3

Query: 9   PDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWI 188
           PD +QW+VL N  +   L S+AL +FR M     EPDEF VTTAL ACA +GAL QG WI
Sbjct: 93  PDVIQWNVLMNGYIESNLESEALRVFRFMFVKGVEPDEFCVTTALAACAKSGALWQGKWI 152

Query: 189 HHYLERKEPSFAV 227
           H Y+++    F V
Sbjct: 153 HEYVKKTTLGFDV 165



 Score = 70.5 bits (171), Expect(3) = 3e-66
 Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG-DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPA 824
           N +LAE  V+EL  +   +G ++D + V + N YL+  + EDA ++ +LI  RG+KKTP 
Sbjct: 315 NAELAEFAVQELLQLENGNGNEEDAAFVQLWNIYLSTGRGEDASKIHRLIGERGLKKTPG 374

Query: 825 CSVIEVDGELNSFVASVQEYPLQLEIHRMLDLLM 926
           CS+IEV+G +N FV+         ++H +L+LL+
Sbjct: 375 CSMIEVNGMVNEFVSGDVSNKDVAQMHAILELLL 408


>ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g28660 gi|9294280|dbj|BAB02182.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|20259531|gb|AAM13885.1| unknown protein [Arabidopsis
           thaliana] gi|24030460|gb|AAN41382.1| unknown protein
           [Arabidopsis thaliana] gi|332643950|gb|AEE77471.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 504

 Score =  142 bits (359), Expect(3) = 4e-65
 Identities = 68/146 (46%), Positives = 102/146 (69%), Gaps = 5/146 (3%)
 Frame = +2

Query: 236 VVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ-ED 403
           V +ALV +YA    I   V+VF+ +  RN   W+A+IGG+A +G  +++  CL +++ ED
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315

Query: 404 KFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRLED 583
             +PD V++  VLAACAH G ++EG  +L ++EA Y + P HEHYSC VD++CR GRL+D
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375

Query: 584 AVAMIRGMPMRPLASMWGS-MRECQT 658
           A+ +I  MPM+PLAS+WG+ +  C+T
Sbjct: 376 ALDLIEKMPMKPLASVWGALLNGCRT 401



 Score = 92.4 bits (228), Expect(3) = 4e-65
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P PD V+WDVL N  +RCGL S+ L +F++ML    EPDEF+VTTALTACA  GAL QG 
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGK 238

Query: 183 WIHHYLERK 209
           WIH ++++K
Sbjct: 239 WIHEFVKKK 247



 Score = 62.4 bits (150), Expect(3) = 4e-65
 Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +3

Query: 648 NVKLAELVVKELRLITTEDG---DDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKT 818
           NV+L EL V+ L  +  E G   +++ + V +SN Y +  +  +A +V  +IE RGI+KT
Sbjct: 404 NVELGELAVQNL--LDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKT 461

Query: 819 PACSVIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           P  S++EVDG +  FV+    +P  L+IH ++ LL
Sbjct: 462 PGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496


>ref|XP_006838670.1| hypothetical protein AMTR_s00002p00243230 [Amborella trichopoda]
           gi|548841176|gb|ERN01239.1| hypothetical protein
           AMTR_s00002p00243230 [Amborella trichopoda]
          Length = 479

 Score =  152 bits (383), Expect(3) = 4e-57
 Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 3/150 (2%)
 Frame = +2

Query: 227 DDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFATHGLVQESIRCLAKMQ 397
           DD V +ALV +YA    I   VKVFD MPE+N H W+AMI G A HG+   ++RC  KMQ
Sbjct: 227 DDYVGTALVDMYAKCGCIERAVKVFDEMPEKNVHSWTAMIVGLAMHGMAAHALRCFDKMQ 286

Query: 398 EDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHYSCAVDMLCRVGRL 577
             + RPD V +  VL AC+H G+V+EGL +  S+   Y++ P H HY C VDMLCR GRL
Sbjct: 287 ALRIRPDPVTLLGVLTACSHGGMVEEGLSLFSSMVNKYNIEPEHPHYGCIVDMLCRAGRL 346

Query: 578 EDAVAMIRGMPMRPLASMWGSMRECQTCRA 667
            +A   ++ MP+RP AS+WG++     C+A
Sbjct: 347 NEAFDFVKAMPIRPRASVWGAL--LSACKA 374



 Score = 59.7 bits (143), Expect(3) = 4e-57
 Identities = 35/91 (38%), Positives = 55/91 (60%)
 Frame = +3

Query: 651 VKLAELVVKELRLITTEDGDDDGSHV*MSNSYLNANKREDARRVWKLIESRGIKKTPACS 830
           V LAE  V+EL      +   DG++  ++N Y    +R DA+ V +++ S  ++KTP CS
Sbjct: 378 VGLAERAVEELAGF---EQCMDGAYTELANLYACVGRRGDAKGVREVMGSERVRKTPGCS 434

Query: 831 VIEVDGELNSFVASVQEYPLQLEIHRMLDLL 923
           VIEV GE++ FVA  + +PL  +I  +L +L
Sbjct: 435 VIEVGGEVSEFVAGDEVHPLMAQIREVLAVL 465



 Score = 58.9 bits (141), Expect(3) = 4e-57
 Identities = 29/63 (46%), Positives = 34/63 (53%)
 Frame = +3

Query: 12  DAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGVWIH 191
           D V W  + +  +R G  +DA  LF DM       D F  TT LTACAH GAL QG W+H
Sbjct: 158 DNVIWHAIIHGYVREGRCTDAFALFNDMQIEGVGVDRFVATTMLTACAHVGALRQGRWVH 217

Query: 192 HYL 200
             L
Sbjct: 218 ELL 220


>gb|EEE59880.1| hypothetical protein OsJ_12480 [Oryza sativa Japonica Group]
          Length = 367

 Score =  160 bits (404), Expect(2) = 1e-53
 Identities = 83/154 (53%), Positives = 104/154 (67%), Gaps = 4/154 (2%)
 Frame = +2

Query: 182 VDPSLPREKGAVFCCDDNVVSALVSVYAS---ISETVKVFDTMPERNTHMWSAMIGGFAT 352
           V+ S P   G  F     V SALVS+YA    + + V+VFD MPERN ++W  M+G FA 
Sbjct: 138 VERSAPELLGDAF-----VGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAV 192

Query: 353 HGLVQESIRCLAKM-QEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGH 529
           HG  +E++ CL +M +ED  RPDGV V   L+ACAHAG V +GL +L  +   Y +APGH
Sbjct: 193 HGRAEEAVSCLDRMAREDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMSRRYGVAPGH 252

Query: 530 EHYSCAVDMLCRVGRLEDAVAMIRGMPMRPLASM 631
           EHY+C VDMLCRV RLEDAVA+I  MPM PLAS+
Sbjct: 253 EHYACTVDMLCRVDRLEDAVALIETMPMAPLASL 286



 Score = 77.8 bits (190), Expect(2) = 1e-53
 Identities = 39/71 (54%), Positives = 54/71 (76%)
 Frame = +3

Query: 732 MSNSYLNANKREDARRVWKLIESRGIKKTPACSVIEVDGELNSFVASVQEYPLQLEIHRM 911
           +SN YL+AN+++DARRV KLI SRGI+K PA S +EVDG ++SFVA  Q +P ++EI  +
Sbjct: 286 LSNIYLDANRKDDARRVRKLIGSRGIRKVPAYSEVEVDGVVSSFVADDQAHPQRVEIWEV 345

Query: 912 LDLLMDYLGDQ 944
           L LL D +G +
Sbjct: 346 LRLLADQMGGE 356



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 30/71 (42%), Positives = 44/71 (61%)
 Frame = +3

Query: 3   PLPDAVQWDVLTNDCLRCGLSSDALLLFRDMLAAFAEPDEFAVTTALTACAHAGALEQGV 182
           P  +A+ +D++     R G++++ L +FR M      PD   +TTA+TACA AGALE G 
Sbjct: 73  PRREAIHYDLVIGAYARAGMAAEGLGVFRAMFMDGVAPDAVVLTTAITACAQAGALECGE 132

Query: 183 WIHHYLERKEP 215
           W+H Y+ER  P
Sbjct: 133 WVHRYVERSAP 143



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = +2

Query: 206 KGAVFCCDDNVVSALVSVYASISETVK-VFDTMPERNTHMWSAMIGGFATHGLVQESIRC 382
           K  +F  D  V +AL+ ++A+  +  + VFD +P R    +  +IG +A  G+  E +  
Sbjct: 40  KNGLFPSDHYVATALLQLHAARPDDARRVFDELPRREAIHYDLVIGAYARAGMAAEGLGV 99

Query: 383 LAKMQEDKFRPDGVLVRNVLAACAHAGLVKEGLHILPSIEALYSLAPGHEHY-SCAVDML 559
              M  D   PD V++   + ACA AG ++ G  +   +E       G     S  V M 
Sbjct: 100 FRAMFMDGVAPDAVVLTTAITACAQAGALECGEWVHRYVERSAPELLGDAFVGSALVSMY 159

Query: 560 CRVGRLEDAVAMIRGMPMRPLASMWGSM 643
            + G LE AV +  GMP R    +WG+M
Sbjct: 160 AKCGCLEQAVRVFDGMPERN-DYVWGTM 186