BLASTX nr result
ID: Stemona21_contig00003431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00003431
(2968 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1231 0.0
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 1207 0.0
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro... 1202 0.0
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A... 1198 0.0
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 1182 0.0
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1180 0.0
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 1180 0.0
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 1178 0.0
ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [S... 1177 0.0
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 1167 0.0
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 1166 0.0
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 1164 0.0
ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polyme... 1162 0.0
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme... 1160 0.0
gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops... 1159 0.0
gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu] 1157 0.0
gb|ACH53360.1| RNA-directed RNA polymerase 1a [Hordeum vulgare] 1142 0.0
gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare su... 1142 0.0
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1139 0.0
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 1137 0.0
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 1231 bits (3184), Expect = 0.0
Identities = 628/958 (65%), Positives = 745/958 (77%), Gaps = 10/958 (1%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TIQ+ GFP+ TA AVKDFLE TG G+V+ALKLR PK R YA+VQF TT+ A
Sbjct: 2 GKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGV--GRLYAIVQF-TTKEA 58
Query: 303 GD--ITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
D I+L + ++L Y L R ME+D VPRPRT M+ EHI +H GC +S E F+VL
Sbjct: 59 ADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVL 118
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAA 656
W +VTVNFGF RK+ F LS + Y+LEL YE+IWEI+L Q +LLIQ++ A
Sbjct: 119 WRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGA 178
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
PRIF+ +P +YE+P+ N+FK DDQW+RTTDFTPS IGQS+ C+ELPY P
Sbjct: 179 PRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELP 238
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
+ +E F YYKE E F LE GS++SRSLDLVPIV P GI +PY++LFKIN +VQNG +
Sbjct: 239 DFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVA 298
Query: 1017 GPTLDDKFFRLVSPVFKPLNY--IERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPK 1190
GP LD F+RLV P P++ IE AL+ + +L+ C +P++WL +QY K+ S P
Sbjct: 299 GPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPS 358
Query: 1191 SATISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKM 1370
S ISLD GLVYVHRVQVTPS+VYF GPEINVSNRVLRH+ DIDNF+R+SF+DE+ DK+
Sbjct: 359 SPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKI 418
Query: 1371 RATDLSPRNVSANG-NRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASR 1547
+TDLSPR SA RT IY RILSTLRNGI IGD+KFEFLAFSSSQLR+SSAWMFASR
Sbjct: 419 HSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASR 478
Query: 1548 PGLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPD--IEAGG-- 1715
GLTAA IR WMG+F IRNVAKYAARLGQSFSSS ETL+V E+E+IPD IE G
Sbjct: 479 YGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTK 538
Query: 1716 YVFSDGIGKISFDFAKKVAVKCGLSSTP-SAFQIRYGGYKGVVAVDPTSSTKLSLRKSMS 1892
YVFSDGIGK+S +FA+KVA KCGL P SAFQIRYGGYKGVVA DPTSS KLSLR SM
Sbjct: 539 YVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMR 598
Query: 1893 KYESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVV 2072
KYES KLDVLA+SKYQPC+LNRQ+I+LLSTLG+ D IFE KQ EAV +LD ILTDP+
Sbjct: 599 KYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLK 658
Query: 2073 ARDALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGR 2252
A++AL +MSPGE TNILKE+L+CGYKPDAEPFLSM+LQT+R KL ELRTK+RIF+P GR
Sbjct: 659 AQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGR 718
Query: 2253 AMMGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPC 2432
+MMGCLDETRTLNYGQVFVQ+S +G + G S L+ S + +++G VVVAKNPC
Sbjct: 719 SMMGCLDETRTLNYGQVFVQISGAGYRQLH--GESSLFSSSRSRQRFIVQGLVVVAKNPC 776
Query: 2433 LHPGDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRR 2612
LHPGDV++L AV+VP LHHM+DC+VFPQKG RPHPNECSGSDLDGDIYFV WD +LIP +
Sbjct: 777 LHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQ 836
Query: 2613 LNVPAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEA 2792
+ P MDYTPA ++ LDH+V IE+VEEYFTNY+VNDSLG+IANAHTVFADREP KA SE
Sbjct: 837 QD-PPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEP 895
Query: 2793 CMELAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
C++LA+ FSIAVDF KTGVPAEIP HLYVKEYPDFMEK DKPTYES+ VIGK+FRA+K
Sbjct: 896 CLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVK 953
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 1207 bits (3124), Expect = 0.0
Identities = 614/954 (64%), Positives = 739/954 (77%), Gaps = 7/954 (0%)
Frame = +3
Query: 126 RTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNAG 305
+T+++SGFPS+ TA AV+ FLE HTG G+V ALK+R ++ T +R YA+VQF TT+ A
Sbjct: 3 KTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIR--EIRTGGARKYAIVQFTTTRAAE 60
Query: 306 DITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWSC 485
I LA RL Y L R M+RDI+P+PR+ ++ E + +H G SKE FS +WS
Sbjct: 61 QIISLANP-RLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSG 119
Query: 486 RDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPRI 665
+V+VNFG RKL+F LS YKL L +E+IW+I+L R Q + +LLIQ+ APRI
Sbjct: 120 NNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRI 179
Query: 666 FEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNIR 845
+E + +V+E+PLLNYF+ D+QW+RTTDFTPSC IG SS+ CLELP PN
Sbjct: 180 YERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFN 239
Query: 846 EQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGPT 1025
E F YYKE EG F LE G +FSR+ DLVPIV P G+ +PY +LF++N +VQNG L G
Sbjct: 240 ENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSM 299
Query: 1026 LDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSATIS 1205
LDD F+RLV P P+ IE ALE + +L+ C +P+KW +EQY K+ S P+S +S
Sbjct: 300 LDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLS 359
Query: 1206 LDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRATDL 1385
LDAGLVYV++VQ+TP KV+F GPE+NVSNRVLR Y EDIDNF+RVSFVDEE +K+ +TD+
Sbjct: 360 LDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDV 419
Query: 1386 SPRNVSANG-NRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGLTA 1562
SPR S N RT+IY RILSTL+NGI IGDKKFEFLAFSSSQLR++S WMFASR GLTA
Sbjct: 420 SPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTA 479
Query: 1563 AHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEA--GG--YVFSD 1730
A IR WMG FH IRNVA+YAARLGQSF SSTETL+V HE+E+IPDIE GG Y+FSD
Sbjct: 480 ADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSD 539
Query: 1731 GIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYESN 1907
GIGKIS +FA+KVA+KCG TPSAFQIRY GYKGVVAVDPTSS KLSLR+SM KYES
Sbjct: 540 GIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESE 599
Query: 1908 NIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDAL 2087
N KLDVLA+SKYQPC+LNRQ+ITLLSTLGV DH FE KQ EAV +LD +LTDP+ A++AL
Sbjct: 600 NTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEAL 659
Query: 2088 GIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMGC 2267
+MSPGE TNILKEMLLCGY+PDAEPFLSM+LQT+R KL ELRTK+RIF+P GR+MMGC
Sbjct: 660 ELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGC 719
Query: 2268 LDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGM-VVLKGTVVVAKNPCLHPG 2444
LDETRTL +GQVFV+ S S YD S SE G+G ++KG+VVVAKNPCLHPG
Sbjct: 720 LDETRTLEHGQVFVKFSGSRFRNLYD---SSDMFSERGRGQCYLIKGSVVVAKNPCLHPG 776
Query: 2445 DVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVP 2624
D++IL AVDVP LHHM+DC+VFPQKG RPHPNECSGSDLDGDIYFV WDP+LIP + +
Sbjct: 777 DLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQ-QIS 835
Query: 2625 AMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMEL 2804
MDYTP P + LDH+VTIEEVEEYFTNY+VNDSLG+IANAHT AD+E KA SE C+EL
Sbjct: 836 PMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVEL 895
Query: 2805 AKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
A+ FSIAVDF KTGVPAEIP++L +EYPDFMEK DKP+YES+ VIGK+FR +K
Sbjct: 896 ARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVK 949
>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709489|gb|EOY01386.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao]
Length = 1109
Score = 1202 bits (3109), Expect = 0.0
Identities = 623/953 (65%), Positives = 727/953 (76%), Gaps = 5/953 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TIQ+S FPSN A VK FLE +TG+ +V+ALK+R K RAYA+VQF + +A
Sbjct: 2 GKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQK---NGGRAYAIVQFTKSTDA 58
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
++ + QRL Y L R+ME DIVP+PRT ++ E + +H GC VS E F VLW
Sbjct: 59 -ELIIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWE 117
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPR 662
DVTVNFG RKL F LS Y+L+L YE+IW+I+L R +Q +LLIQ+ APR
Sbjct: 118 EVDVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPR 177
Query: 663 IFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
I+E + V+ENPLLNYF DDQW+RTTDFT S IGQSS CLELPY PN
Sbjct: 178 IYEKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNF 237
Query: 843 REQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGP 1022
RE F YYKE EG F LE GSS+SR+L+LVPIV P GI++PY++LFKIN +VQNG + GP
Sbjct: 238 RENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGP 297
Query: 1023 TLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSATI 1202
LD F+RLV+P YI+ ALE + YL+ C +P+KWL EQY + S + P S I
Sbjct: 298 ALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVI 357
Query: 1203 SLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRATD 1382
SLD GLV V RVQ+TPS+VYF GPEINVSNRVLRH+ +DIDNF+R++FVDEE +K+ +TD
Sbjct: 358 SLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTD 417
Query: 1383 LSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGLTA 1562
L RN T IY RILSTL+NGI IGDK+FEFLAFSSSQLR++SAWMFASR GLTA
Sbjct: 418 LLTRN-----RITEIYGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTA 472
Query: 1563 AHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG----GYVFSD 1730
A IR WMG+F IRNVAKYAARLGQSFSSSTETL+V + E+E+I D+E YVFSD
Sbjct: 473 ADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVFSD 532
Query: 1731 GIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYESN 1907
GIGKIS FAKKVA KC L+ TPSAFQIR GG+KGVVAVDPTSS KLSLR SMSKYES
Sbjct: 533 GIGKISAKFAKKVAAKCRLNGRTPSAFQIRIGGFKGVVAVDPTSSKKLSLRGSMSKYESE 592
Query: 1908 NIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDAL 2087
N KLDVLA+SKYQPC+LNRQ+ITLLSTLGV DH FE KQ E V +L+ ILTDP+ A++AL
Sbjct: 593 NTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILTDPLKAQEAL 652
Query: 2088 GIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMGC 2267
+MSPGE TNILKEMLLCGY+PDAEPFLSM+LQT+R KL ELRTKSRIF+ GR+MMGC
Sbjct: 653 ELMSPGENTNILKEMLLCGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSMMGC 712
Query: 2268 LDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPGD 2447
LDETRTL+YGQVFVQVS GS S Q +V +G VVVAKNPCLHPGD
Sbjct: 713 LDETRTLDYGQVFVQVS----------------GSRSEQRFIV-QGKVVVAKNPCLHPGD 755
Query: 2448 VQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVPA 2627
V++L+AV+VPDLHHM+DC+VFPQKG RPHPNECSGSDLDGDIYFV WDP+LIP + +P
Sbjct: 756 VRVLTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSK-QIPP 814
Query: 2628 MDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMELA 2807
MDY+PAPT L+HEVTIEEVEEYFTNY+VNDSLG+IANAHTVFADREPRKA S C LA
Sbjct: 815 MDYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLA 874
Query: 2808 KLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
KLFSIAVDF KTGVPAEIP L VKEYPDFMEK DKPTY+S VIGK+FR +K
Sbjct: 875 KLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVK 927
>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
gi|548853371|gb|ERN11375.1| hypothetical protein
AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 1198 bits (3099), Expect = 0.0
Identities = 605/964 (62%), Positives = 741/964 (76%), Gaps = 3/964 (0%)
Frame = +3
Query: 84 QLSCLHCVASKMQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSR 263
+ + L C S GRT+Q+SGFP A AVK FLE TG G+V+ LK+R+ K P SR
Sbjct: 62 ETATLGCGVSSEGGRTVQVSGFPQGTCAEAVKKFLESITGFGTVYHLKIRIHKS-KPNSR 120
Query: 264 AYAVVQFLTTQNAGDITLLAQQQRLRYNG-FLLTVRDMERDIVPRPRTSMYVQEHIRMHS 440
+A+VQF T+++A I LA Q + Y G + VR ME DIVP PR + +V E I+++
Sbjct: 121 VFAIVQFTTSKSAEVIYSLAPQPKSLYFGNSYVIVRYMENDIVPNPRVTYHVLESIQLYF 180
Query: 441 GCSVSKETFSVLWSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQ 620
G +S+E+F++LWS +V V FGF +K++F L+ YKL+L YE+IW+IQLRR +
Sbjct: 181 GNQISEESFAILWSNTNVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTE 240
Query: 621 KLNFLLIQVIAAPRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSA 800
+L++Q+ APRIF+ +Y++PL NY+K D+QW+R+ DFTPSCSIGQSS+
Sbjct: 241 GTRYLVLQMQGAPRIFQKPLSFSSDIYDSPLFNYYKDFPDEQWVRSIDFTPSCSIGQSSS 300
Query: 801 FCLELPYDSTFPNIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLF 980
CL LP + PNIRE F YYKE+ G F L+ GSSFS SL LVPIV P I++PYK+LF
Sbjct: 301 LCLALPNGTRIPNIRENFAYYKEIGGAFNLKTGSSFSHSLHLVPIVHPPDQIKLPYKILF 360
Query: 981 KINHMVQNGTLMGPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYL 1160
++N +VQNG L+GPTLD +F+ L++ + P ++ER+LE++S L + CL+PAKWL EQY
Sbjct: 361 RVNSLVQNGFLVGPTLDTEFYNLLNGLPSP--FVERSLEDISRLTNCCLEPAKWLQEQYK 418
Query: 1161 KFERSNRIPKSATISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRV 1340
K+ R P A ISL+ GLVYVHRVQVTPSKVYFYGPE+NVSNRVLR +S IDNF+R+
Sbjct: 419 KYRNLPRRPSPAAISLEPGLVYVHRVQVTPSKVYFYGPEVNVSNRVLRQFSNYIDNFLRI 478
Query: 1341 SFVDEEADKMRATDLSPRNVS-ANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLR 1517
SF+DE+ +R+TDLS R S A T++Y R+LSTL+NGI IGDKKFEFLAFSSSQLR
Sbjct: 479 SFIDEDFGSIRSTDLSKRMASGAEEKHTTVYGRVLSTLKNGIVIGDKKFEFLAFSSSQLR 538
Query: 1518 DSSAWMFASRPGLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIP 1697
D+SAWMF+ G+TAA+IR WMGDF IRNVAK AAR+GQSF SSTETL V EVE I
Sbjct: 539 DNSAWMFSPIDGITAANIRQWMGDFSGIRNVAKCAARMGQSFGSSTETLNVKPEEVERIS 598
Query: 1698 DIEAGGYVFSDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLS 1874
DI+ G YVFSDGIGKIS +FAKKVA+KCG S TPSAFQIRYGGYKGVVAVDPTS KLS
Sbjct: 599 DIKNGKYVFSDGIGKISLEFAKKVALKCGCSEKTPSAFQIRYGGYKGVVAVDPTSRYKLS 658
Query: 1875 LRKSMSKYESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMI 2054
LR SM KY SNN KLDVLAYSK+QPC+LNRQ+ITLLSTLGV+D++FE KQ +AV++LD I
Sbjct: 659 LRGSMRKYSSNNTKLDVLAYSKFQPCFLNRQVITLLSTLGVQDNVFETKQKDAVSQLDKI 718
Query: 2055 LTDPVVARDALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRI 2234
L DP A +AL +MSPGE N+LKEML CGY PD+EPFLSM+LQT+R KL EL+TK+RI
Sbjct: 719 LVDPESAFEALELMSPGENVNVLKEMLFCGYLPDSEPFLSMMLQTFRGLKLSELKTKTRI 778
Query: 2235 FLPQGRAMMGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVV 2414
F+P GR+MMGCLDET L YGQVFVQ S G ++ G S + S S Q + V+ G V+
Sbjct: 779 FIPNGRSMMGCLDETGILEYGQVFVQFSAIGNRRLHEFGLSKINESGSDQRVRVVVGKVI 838
Query: 2415 VAKNPCLHPGDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDP 2594
VAKNPCLHPGDV+IL+A+DVP LHHM++C+VFPQKGKRPHPNECSGSDLDGDIYFVSWDP
Sbjct: 839 VAKNPCLHPGDVRILTAIDVPALHHMVNCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDP 898
Query: 2595 DLIPRRLNVPAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPR 2774
LIP P M+Y PAP LDHEVTIEE+EEYFTNYM+NDSLG+IANAHTVFAD+EP
Sbjct: 899 MLIPCHQGTP-MEYEPAPNNDLDHEVTIEEIEEYFTNYMINDSLGIIANAHTVFADKEPM 957
Query: 2775 KADSEACMELAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMF 2954
KADS C++LA LFS+AVDF KTGVPA+IP HLYVKEYPDFM+K DKPTY+S+ VIGK+F
Sbjct: 958 KADSTPCVDLANLFSVAVDFPKTGVPADIPQHLYVKEYPDFMDKTDKPTYQSRRVIGKLF 1017
Query: 2955 RAIK 2966
R +K
Sbjct: 1018 REVK 1021
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 1182 bits (3057), Expect = 0.0
Identities = 609/953 (63%), Positives = 724/953 (75%), Gaps = 5/953 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TIQ+ GF S+ +A VK FLE +TG +V+ALK+R K RA+A+VQF + +A
Sbjct: 2 GKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDA 58
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
G I LA Q RL Y L R+ME DIVP+PR ++ E + ++ GC VS+E F VLW
Sbjct: 59 GLIIRLANQ-RLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWK 117
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPR 662
+VT+NFG RKL F LS+ + YKLEL YE+IW+I+LR H Q LLIQ+ APR
Sbjct: 118 ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177
Query: 663 IFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
I+E V+++PLLNYFK DDQW+RTTDFT S IGQSS LELP++ PN
Sbjct: 178 IYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLPNF 237
Query: 843 REQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGP 1022
RE F YYKE EG LE GSS+S +L LVPIV P R I++P+++LFK+N +VQNG + GP
Sbjct: 238 RENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGP 297
Query: 1023 TLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSATI 1202
LDD F+RLV P YI+ ALE + YLR C +P++WL E+Y F RS + S TI
Sbjct: 298 ALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTI 357
Query: 1203 SLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRATD 1382
SLD GLVYV RVQ+TPS+VYF GPEINVSNRVLR + DIDNF+R+SFVDEE +K+ +T
Sbjct: 358 SLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHST- 416
Query: 1383 LSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGLTA 1562
NV A G RT IY+RILSTLRNGI IG+K+FEFLAFSSSQLR++SAWMFASR GLTA
Sbjct: 417 ----NVQARGRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTA 472
Query: 1563 AHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIE----AGGYVFSD 1730
A IR+WMG+F IRNVAKYAARLGQSFSSSTETL+V + E+ +IPDIE YVFSD
Sbjct: 473 ADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSD 532
Query: 1731 GIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYESN 1907
GIGKIS +FAKKVA KC L TPSAFQIR GG+KGVVA+DPTSS KLSLRKSM KYES
Sbjct: 533 GIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESE 592
Query: 1908 NIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDAL 2087
N KLDVLA+SKYQPC+LNRQ+ITLLSTLGV D FE KQ E V +L+ +LTDP+ A++AL
Sbjct: 593 NTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLEAQEAL 652
Query: 2088 GIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMGC 2267
+MSPGE TNILKEMLLCGYKPDAEPFLSM+L+T+R KL ELRTK+RIF+ +GR+MMGC
Sbjct: 653 ELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGC 712
Query: 2268 LDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPGD 2447
LDETRTLNYGQVFVQ S GS S + +V +G V+VAKNPCLHPGD
Sbjct: 713 LDETRTLNYGQVFVQFS----------------GSRSERRFIV-QGKVIVAKNPCLHPGD 755
Query: 2448 VQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVPA 2627
V++L AV+VPDLHHM+DC+VFPQKG RPHPNECSGSDLDGD+YFV WDP+LIP + +
Sbjct: 756 VRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYK-QIDP 814
Query: 2628 MDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMELA 2807
MDY+PA T LDHEVTIEE+EEYFTNY+VNDSLG+I+NAHT FADREP KA S C+ELA
Sbjct: 815 MDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELA 874
Query: 2808 KLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
KLFSIAVDF KTGVPAEIP L VKEYPDFMEK DKP+Y+S VIGK+FR +K
Sbjct: 875 KLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVK 927
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 1180 bits (3052), Expect = 0.0
Identities = 608/953 (63%), Positives = 730/953 (76%), Gaps = 5/953 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TIQ+ G PSN +A +K+FLE++TGEG++ AL+++ PK + S +A VQF + + A
Sbjct: 2 GKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPK--SGVSMTHAKVQFTSLRLA 59
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
I LA+Q L Y G L R+M+ DI+P+PRT ++ + I +H G +S E F VLW
Sbjct: 60 ELIISLAKQ--LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWK 117
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPR 662
+V+V FGF RK YF LS ++ YKLELS E+IW+IQLR Q FLLIQ++ AP+
Sbjct: 118 AINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQ 177
Query: 663 IFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
I+E + L+YFK + DDQW+R DFTPSCSIGQSSA CLELP+ S PN
Sbjct: 178 IYEK---------DVSALSYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLPNF 228
Query: 843 REQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGP 1022
E F YKE + F LE G+SFS +L LVPIV P +G +P+K+LFKIN +VQNG L GP
Sbjct: 229 CENFARYKENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGP 288
Query: 1023 TLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSATI 1202
TLD FFR V P +++IE ALE + YL C +P +WLHEQY + S ++ S I
Sbjct: 289 TLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQYRTYI-SKQVAGSPAI 347
Query: 1203 SLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRATD 1382
SLD GLVYV RVQ+TP KVYF GPE+NVSNRVLR+Y EDIDNF+RVSF+DE ++K+ +T
Sbjct: 348 SLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTV 407
Query: 1383 LSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGLTA 1562
+SPR +S G RT +YRRILS L+NGI IGDKKF+FLA SSSQLRD+SAWMFASRPGLTA
Sbjct: 408 ISPR-MSNEGRRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTA 466
Query: 1563 AHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAGG----YVFSD 1730
A IR+ MGDF IRNVAKYAARLGQSFSSS ETL V +HE+E+IPDIE YVFSD
Sbjct: 467 ADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSD 526
Query: 1731 GIGKISFDFAKKVAVKCGL-SSTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYESN 1907
GIGKIS + A +VA+KCG +STPSAFQIRYGGYKGVVAVDPTSS KLSLRKSM KYES
Sbjct: 527 GIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESE 586
Query: 1908 NIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDAL 2087
N LDVL++SKY+PC+LNRQ+ITLLSTLGVKDH+FE KQ EAV +LD IL DP+ A++AL
Sbjct: 587 NTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEAL 646
Query: 2088 GIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMGC 2267
+MSPGE TNILKEML+CGYKPDAEPFLSM+LQT+R KL ELRTK+RIF+P GR+MMGC
Sbjct: 647 ELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGC 706
Query: 2268 LDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPGD 2447
LDETRTL YG+VFVQ+S +G + + +GS S +L+G VVVAKNPCLHPGD
Sbjct: 707 LDETRTLEYGEVFVQISGTGGRQSFGDSLM-FYGSGSHHDNFILEGKVVVAKNPCLHPGD 765
Query: 2448 VQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVPA 2627
V+ILSAVDVP LHHM+DC+VFPQKG RPHP+ECSGSDLDGDIYFV WD DLIP R +
Sbjct: 766 VRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPR-QINP 824
Query: 2628 MDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMELA 2807
MDYTPAPT LDH+V IEEVEEYFTNY+ ND LG+IANAHTVFAD+E KA C ELA
Sbjct: 825 MDYTPAPTKVLDHDVMIEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELA 884
Query: 2808 KLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
KLFSIA++F KTGVPAEIP HL+VKEYPDFMEK +KPTYES+ VIGK+FR +K
Sbjct: 885 KLFSIALEFPKTGVPAEIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVK 937
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 1180 bits (3052), Expect = 0.0
Identities = 607/953 (63%), Positives = 724/953 (75%), Gaps = 5/953 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TIQ+ GF S+ +A VK FLE +TG +V+ALK+R K RA+A+VQF + +A
Sbjct: 2 GKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDA 58
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
G I LA Q RL Y L R+ME DIVP+PR ++ E + ++ C VS+E F VLW
Sbjct: 59 GLIIRLANQ-RLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWK 117
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPR 662
+VT+NFG RKL F LS+ + YKLEL YE+IW+I+LR H Q LLIQ+ APR
Sbjct: 118 ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177
Query: 663 IFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
I+E V+++PLLNYFK DDQW+RTTDFT S IGQSS CLELP++ PN
Sbjct: 178 IYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNF 237
Query: 843 REQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGP 1022
RE F YYKE EG LE GSS+S +L LVPIV P R I++P+++LFK+N +VQNG + GP
Sbjct: 238 RENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGP 297
Query: 1023 TLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSATI 1202
LDD F+RLV P YI+ ALE + YLR C +P++WL E+Y F RS + S TI
Sbjct: 298 ALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTI 357
Query: 1203 SLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRATD 1382
SLD GLVYV RVQ+TPS+VYF GPEINVSNRVLR + DIDNF+R+SFVDEE +K+ +T
Sbjct: 358 SLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHST- 416
Query: 1383 LSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGLTA 1562
NV A G RT IY+RILSTLRNGI IG+K+FEFLAFSSSQLR++SAWMFASR GLTA
Sbjct: 417 ----NVQARGRRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTA 472
Query: 1563 AHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIE----AGGYVFSD 1730
A IR+WMG+F IRNVAKYAARLGQSFSSSTETL+V + E+ +IPDIE YVF D
Sbjct: 473 ADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFPD 532
Query: 1731 GIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYESN 1907
GIGKIS +FAKKVA KC L TPSAFQIR GG+KGVVA+DPTSS KLSLRKSM KYES
Sbjct: 533 GIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESE 592
Query: 1908 NIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDAL 2087
N KLDVLA+SKYQPC+LNRQ+ITLLSTLGV D+ FE KQ E V +L+ +LTDP+ A++AL
Sbjct: 593 NTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKKQREVVDQLNALLTDPLEAQEAL 652
Query: 2088 GIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMGC 2267
+MSPGE TNILKEMLLCGYKPDAEPFLSM+L+T+R KL ELRTK+RIF+ +GR+MMGC
Sbjct: 653 ELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGC 712
Query: 2268 LDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPGD 2447
LDETRTLNYGQVFVQ S GS S + +V +G V+VAKNPCLHPGD
Sbjct: 713 LDETRTLNYGQVFVQFS----------------GSRSERRFIV-QGKVIVAKNPCLHPGD 755
Query: 2448 VQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVPA 2627
V++L AV+VPDLHHM+DC+VFPQKG RPHPNECSGSDLDGD+YFV WDP+LIP + +
Sbjct: 756 VRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYK-QIDP 814
Query: 2628 MDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMELA 2807
MDY+PA T LDHEVTIEE+EEYFTNY+VNDSLG+I+NAHT FADREP KA S C+ELA
Sbjct: 815 MDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELA 874
Query: 2808 KLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
KLFSIAVDF KTGVPAEIP L VKE+PDFMEK DKP+Y+S VIGK+FR +K
Sbjct: 875 KLFSIAVDFPKTGVPAEIPQELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVK 927
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 1178 bits (3048), Expect = 0.0
Identities = 606/954 (63%), Positives = 733/954 (76%), Gaps = 7/954 (0%)
Frame = +3
Query: 126 RTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNAG 305
+TIQ+ GFPS +A +K+FLE++TGEG++ AL+++ P+ + S +A VQF + + A
Sbjct: 3 KTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPR--SGASMTHAKVQFTSFELAE 60
Query: 306 DITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWSC 485
I L ++ ++ Y L R+M+ DI+P+PR ++ + I +H GC +S E F VLW
Sbjct: 61 FIITLCKK-KVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKA 119
Query: 486 RDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPRI 665
+V+V FG RK YF LS ++ YKLELSYE+IW+IQL+ Q FLLIQ++ AP+I
Sbjct: 120 INVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQI 179
Query: 666 FEMVTINPLSVYENPLLNY-FKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
+E + P+L+Y FK + DDQW+R DFTPSC IGQS A CLELPY S PN
Sbjct: 180 YEK---------DVPVLSYYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNF 230
Query: 843 REQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGP 1022
RE F YYKE +G F LE GSS+S +L LVPI+ P +G +P+++LFKIN +VQNG L GP
Sbjct: 231 RENFAYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGP 290
Query: 1023 TLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSATI 1202
TLD FFRLV P P+++IE ALE + +L+ C +P +WL EQY + + + S I
Sbjct: 291 TLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQYRTYVKKP-VAGSPAI 349
Query: 1203 SLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRATD 1382
SLD GLVYV RVQ+TP KVYF GPE+NVSNRVLR+Y EDIDNF+RVSF+DE +K+ +T
Sbjct: 350 SLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTV 409
Query: 1383 LSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGLTA 1562
+SPR +S G RT +YRRILS L+NGI IGDKKF+FLAFSSSQLRD+SAWMFASRPGLTA
Sbjct: 410 ISPR-MSKEGRRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTA 468
Query: 1563 AHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAGG----YVFSD 1730
A IR+WMGDF IRNVAKYAARLGQSFSSS ETL V + E+E IPDIE YVFSD
Sbjct: 469 AEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSD 528
Query: 1731 GIGKISFDFAKKVAVKCGL-SSTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYESN 1907
GIGKIS A +VA+KCG SSTPSAFQIRYGGYKGVVAVDPTSS KLSLRKSM KYES+
Sbjct: 529 GIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESD 588
Query: 1908 NIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDAL 2087
N LDVLA+SKYQP +LNRQ+ITLLSTLGVKDH+FE KQ AV +LD IL DPV A++AL
Sbjct: 589 NTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEAL 648
Query: 2088 GIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMGC 2267
+MSPGE TN+LKEML+CGYKPDAEPFLSM+LQT+R KL ELRTK+RIF+P GR+MMGC
Sbjct: 649 ELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGC 708
Query: 2268 LDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLW-GSESGQGMVVLKGTVVVAKNPCLHPG 2444
LDETRTL YG+VFVQ+S +G + G S ++ GS S +L+G +VVAKNPCLHPG
Sbjct: 709 LDETRTLEYGEVFVQISGTGGRQSF--GDSLMFRGSGSHHDNFILEGKIVVAKNPCLHPG 766
Query: 2445 DVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVP 2624
DV++L AV+VP LHHM+DC+VFPQKGKRPHPNECSGSDLDGDIYFV WD DLIP + +
Sbjct: 767 DVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQ-QIN 825
Query: 2625 AMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMEL 2804
MDYTPAPT LDH+V IEEVEEYFTNY+VNDSLG+IANAHTVFAD+E KA + C EL
Sbjct: 826 PMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTEL 885
Query: 2805 AKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
AKLFSIAVDF KTGVPAEIP +L VKEYPDFMEK DKPTYES+ VIGK+FR +K
Sbjct: 886 AKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVK 939
>ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [Sorghum bicolor]
gi|241934151|gb|EES07296.1| hypothetical protein
SORBIDRAFT_04g028630 [Sorghum bicolor]
Length = 1114
Score = 1177 bits (3045), Expect = 0.0
Identities = 599/956 (62%), Positives = 729/956 (76%), Gaps = 6/956 (0%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M GRTIQ+ GF +A +VK+FLER +G G+++ALKLR P+ I+ SRA+A+VQF + +
Sbjct: 1 MVGRTIQVHGFALTDSAESVKEFLERISGAGTIYALKLRHPRNISANSRAFAIVQFQSQE 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + + Q+ R F L R +RDIVPRPR M+ E +H GC V + S L
Sbjct: 61 SASLVEDVVQRNAPRIGRFYLKTRPADRDIVPRPRIPMFSLEDTVLHLGCLVKENILSAL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRR--SHDQKLNFLLIQVI 650
++ +V+V FGF+ +K+YF LS+ YKLELSYESIWEIQL R ++ + FLLIQV
Sbjct: 121 FTASNVSVQFGFDMKKIYFYLSYNFIKYKLELSYESIWEIQLHRPPAYRSRTKFLLIQVQ 180
Query: 651 AAPRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDST 830
AAP+I+E++ P +YE+P N+F D+QW RT DFTPS SIGQSS FCLE+P
Sbjct: 181 AAPKIYELLPRRPGLMYEDPFFNWFMDDTDEQWTRTIDFTPSVSIGQSSIFCLEVPQQCE 240
Query: 831 FPNIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGT 1010
P I + FVYYKE F G S+S LVPIV+ IEVPY++LFKINH+VQNGT
Sbjct: 241 LPRIGDYFVYYKERNLDFECRNGYSYSCGNCLVPIVKSPDYIEVPYEILFKINHLVQNGT 300
Query: 1011 LMGPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIP- 1187
L GPT+D FF VSP F+P+++I+RAL MSYL+S+CL+P WL QY + RS
Sbjct: 301 LSGPTVDHSFFCHVSPEFEPIDHIKRALLKMSYLKSTCLNPTNWLSVQYSRIRRSRHASQ 360
Query: 1188 KSATISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADK 1367
+S+ ISLD GLVYVHRVQVTP+KVYFYGPEINVSNRV+R++S DIDNF+R+SFVDE+ +K
Sbjct: 361 RSSNISLDDGLVYVHRVQVTPAKVYFYGPEINVSNRVVRNFSADIDNFLRISFVDEDCEK 420
Query: 1368 MRATDLSPRNVSAN-GNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFAS 1544
+R+ DLSPR+ S N RT++Y R+LS L NGI IGDK FEFLAFSSSQLRD+SAWMFAS
Sbjct: 421 LRSLDLSPRSTSGNDARRTALYNRVLSVLSNGINIGDKHFEFLAFSSSQLRDNSAWMFAS 480
Query: 1545 RPGLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG-GYV 1721
R GLTA+ IR WMGDF +IRNVAKYAARLGQSFSSSTETL V +HEVE IPDI+ G Y+
Sbjct: 481 RQGLTASDIRKWMGDFRDIRNVAKYAARLGQSFSSSTETLIVRKHEVEQIPDIKNGTNYI 540
Query: 1722 FSDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKY 1898
FSDG+GKIS +FAK+VA+KC L PS FQIRYGGYKGVVAVDP S+ KLSLR+SM K+
Sbjct: 541 FSDGVGKISANFAKEVAMKCKLRRFAPSVFQIRYGGYKGVVAVDPRSNRKLSLRRSMLKF 600
Query: 1899 ESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVAR 2078
+S NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV D++FE KQ EA+ +L+ ++T+P AR
Sbjct: 601 QSENITLDVLAYSKYQPCFLNRQLITLLSTLGVGDNVFELKQKEAIKQLNRMVTEPQAAR 660
Query: 2079 DALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAM 2258
+A+ +M GE TN++KE+L CGY+PD EP+LSMLLQT+R KL EL+TKSRIF+ QGRAM
Sbjct: 661 EAVELMPMGEVTNVVKELLSCGYQPDHEPYLSMLLQTFRASKLLELKTKSRIFITQGRAM 720
Query: 2259 MGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLH 2438
MGCLDETRTL YGQVF+Q S +V+ G VVVAKNPCLH
Sbjct: 721 MGCLDETRTLKYGQVFIQASYCA----------------DDHHKIVVTGKVVVAKNPCLH 764
Query: 2439 PGDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLN 2618
PGD+++L AVDVP LHHM DC+VFPQ+G RPHPNECSGSDLDGDIYFVSWDPDLIP +
Sbjct: 765 PGDIRVLQAVDVPSLHHMFDCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPDLIPSHME 824
Query: 2619 VPAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACM 2798
P MDYTPAP TLDH+VTIEE++EYFTNY+VN+SLG+IANAH V+AD+E KA S C+
Sbjct: 825 DP-MDYTPAPAETLDHDVTIEEIQEYFTNYIVNESLGIIANAHVVYADKEDLKAKSRPCL 883
Query: 2799 ELAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
ELAKLFSIAVDF KTGVPA IP L+VKEYPDFMEKLDK TYESKGVIGK++R IK
Sbjct: 884 ELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKATYESKGVIGKLYREIK 939
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 1167 bits (3020), Expect = 0.0
Identities = 610/955 (63%), Positives = 728/955 (76%), Gaps = 7/955 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TIQ+SGFPS+ +A +VK+FLE HTG G+V+A+K+R K SR+YA+VQF+T + A
Sbjct: 2 GKTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTK--NGGSRSYAIVQFMTVETA 59
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
I LA RL Y L R MERDIVP+PR ++Y +++ +H GC +SKE FS LW
Sbjct: 60 ELIIRLANP-RLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWR 118
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPR 662
+V+V+FG R+L F L++ Y+L+L YE++W+I+L R Q +LLIQ++ APR
Sbjct: 119 VGNVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPR 178
Query: 663 IFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
++E + ENPL NYFK + DDQW+R TDFT SC IG SSA LELPY P++
Sbjct: 179 VYEKEVRISFDILENPLFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLPDL 238
Query: 843 REQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMGP 1022
RE FVYYKE E F LE GSSFSR+LDLVPIV P GI +P++ +FKIN ++QNG L GP
Sbjct: 239 RENFVYYKESEERFILESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGP 298
Query: 1023 TLDDKFFRLVSPV-FKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSAT 1199
TLD F+RLV P + ++ I ALE + L+ +PA WL+EQY K+ + R PK
Sbjct: 299 TLDVDFYRLVDPQRIRNVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPA 358
Query: 1200 ISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRAT 1379
I+LD+GLVYV RVQVTPSKVYF GPEINVSNRVLR Y + ID F+RVSFVDEE +K+ +T
Sbjct: 359 IALDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFST 418
Query: 1380 DLSPRNVSAN-GNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPGL 1556
DLSPR +AN RT IYRRILS LRNGI IGD+KFEFLAFSSSQLRD+S WMFA+ G
Sbjct: 419 DLSPRTSNANEDRRTGIYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGH 478
Query: 1557 TAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIE----AGGYVF 1724
+A IR W+GDF +IRNVAKYAARLGQSF SSTETLTV E EVI DIE A YVF
Sbjct: 479 SADTIRQWIGDFRSIRNVAKYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYVF 538
Query: 1725 SDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYE 1901
SDGIGKIS FAK+VA KCGL PSAFQIRY GYKGVVAVDPTSSTKLSLRKSM KYE
Sbjct: 539 SDGIGKISSTFAKRVAKKCGLKDCVPSAFQIRYCGYKGVVAVDPTSSTKLSLRKSMWKYE 598
Query: 1902 SNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARD 2081
S KLDVLAYSK Q CYLNRQ+ITLLSTLGV D +FE KQ EAV +L+ IL DP+ AR+
Sbjct: 599 SELHKLDVLAYSKLQHCYLNRQLITLLSTLGVGDRVFEKKQREAVQQLNAILNDPLRARE 658
Query: 2082 ALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMM 2261
AL +MS GETTNILKE+L CGY+P+AEPFLSM+LQ +R KL ELRTK+RI +P GRAMM
Sbjct: 659 ALDLMSAGETTNILKELLSCGYQPNAEPFLSMMLQAFRASKLQELRTKTRISIPDGRAMM 718
Query: 2262 GCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHP 2441
GCLDE RTL YG+VFVQ S F+++ L G+ SGQ +V+ G VVVAKNPCLHP
Sbjct: 719 GCLDEMRTLEYGEVFVQFSGITHRPFFEDS-FMLGGTGSGQNYIVV-GRVVVAKNPCLHP 776
Query: 2442 GDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNV 2621
GDV++L AV+VP LHHM+DC+VFPQKG RPHPNECSGSDLDGDIYFV WD +LIP++
Sbjct: 777 GDVRVLRAVNVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFE 836
Query: 2622 PAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACME 2801
P MDY+PAPT LDH+V IEEV+EYFTNY+VNDSLG+IANAHT FAD+EP KA S +C+E
Sbjct: 837 P-MDYSPAPTTRLDHDVRIEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIE 895
Query: 2802 LAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
LA+LFSIAVDF KTGVPA IP LYVKEYPDFMEKL+KPTYES+ VIGK+FR +K
Sbjct: 896 LARLFSIAVDFPKTGVPAVIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFREVK 950
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 1166 bits (3016), Expect = 0.0
Identities = 594/954 (62%), Positives = 731/954 (76%), Gaps = 4/954 (0%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+T+Q+SGFPS A VKD LE+ G G+VFA+KLR PK I+ SR++A+VQF +
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + AQ+ LR L R ERDIVPRPRT+++ + ++H GC + + SVL
Sbjct: 61 HASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAA 656
WS +V+V FGF +++ F L + +K YKLELSYESIWEIQL R + FLLIQV AA
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA 180
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
P+I+E S+Y++PL NYF+ DDQW RTTDFTPS SIGQS CLELP+ P
Sbjct: 181 PKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICYLP 240
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
NIRE FVYY+ F L+ G S+S + VP+V+ +VPY++LFKINH+VQNGTL
Sbjct: 241 NIREYFVYYEVHNDIFNLQPGYSYSSNTCFVPVVKSHYFTDVPYEILFKINHLVQNGTLS 300
Query: 1017 GPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSA 1196
GPTLDD F+RLVSP ++ ++ I+RALE MSYL+ +CL+P WL EQY K RS R+ S
Sbjct: 301 GPTLDDNFYRLVSPGYERIDRIKRALEKMSYLKKTCLNPTNWLSEQYKKMRRS-RVLTSP 359
Query: 1197 TISLDA-GLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMR 1373
I+LD GLVYV+RVQ+TP+KVYFYGPEINVSNRV+R+Y+ D+DNF+R+SFVDE+ +K+R
Sbjct: 360 NITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRNYAADLDNFLRISFVDEDCEKLR 419
Query: 1374 ATDLSPRNVSANG-NRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRP 1550
+TDLS R+ N RT++Y R+LS L NGI IGDK F+FLAFSSSQLRD+SAWMFASRP
Sbjct: 420 STDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFSSSQLRDNSAWMFASRP 479
Query: 1551 GLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG-GYVFS 1727
GL+A+ IR WMG+F NIRNVAKYAARLGQSFSSSTETL V ++EV+ PD+ G YVFS
Sbjct: 480 GLSASDIREWMGNFRNIRNVAKYAARLGQSFSSSTETLKVHKYEVKEAPDVTNGTEYVFS 539
Query: 1728 DGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYES 1904
DGIG IS DFA +V+ KC L+ TPSAFQIRYGGYKGVVA+DPTS KLSLRKSMSK++S
Sbjct: 540 DGIGTISADFADEVSKKCNLTRFTPSAFQIRYGGYKGVVAIDPTSQWKLSLRKSMSKFQS 599
Query: 1905 NNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDA 2084
+NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV D IFE KQ EAV +L+ ++ +P A DA
Sbjct: 600 DNITLDVLAYSKYQPCFLNRQLITLLSTLGVIDSIFELKQQEAVQQLNRMVAEPQAAIDA 659
Query: 2085 LGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMG 2264
+ +M GE TNI+KE+LLCGY+PD EP++SMLLQT+R KL EL+T+SRIF+P+GRAMMG
Sbjct: 660 IELMPMGEITNIVKELLLCGYRPDVEPYVSMLLQTFRASKLLELKTRSRIFVPKGRAMMG 719
Query: 2265 CLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPG 2444
CLDETRTL YGQVF+Q S S +G V+ G V+VAKNPC+HPG
Sbjct: 720 CLDETRTLKYGQVFIQAS----------------NSADDRGKSVVTGKVIVAKNPCIHPG 763
Query: 2445 DVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVP 2624
D++IL AV P L HM++C+VFPQ G RPHPNECSGSDLDGDIYFVSWDPDLIP R+ P
Sbjct: 764 DIRILQAVHSPLLGHMVNCVVFPQLGPRPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAP 823
Query: 2625 AMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMEL 2804
MDYTPAPT TLDH+V IEEV EYFTNY+VN+SLG+IANAH VFADR+ KA+S C++L
Sbjct: 824 -MDYTPAPTETLDHDVMIEEVHEYFTNYIVNESLGIIANAHVVFADRQSLKAESTQCIKL 882
Query: 2805 AKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
A+LFSIAVD+ KTGVPA+IP L+VKEYPDFMEKLD+ TY S+GVIGK++R IK
Sbjct: 883 AELFSIAVDYPKTGVPAQIPHELHVKEYPDFMEKLDRATYVSEGVIGKLYREIK 936
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 1164 bits (3011), Expect = 0.0
Identities = 594/954 (62%), Positives = 730/954 (76%), Gaps = 4/954 (0%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+T+Q+SGFPS A VKD LE+ G G+VFA+KLR PK I+ SR++A+VQF +
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + AQ+ LR L R ERDIVPRPRT+++ + ++H GC + + SVL
Sbjct: 61 HASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAA 656
WS DV+V FGF +++ F L + +K YKLELSYESIWEIQL R + FLLIQV AA
Sbjct: 121 WSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA 180
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
P+I+E S+Y++PL NYF+ DDQW RTTDFTPS SIGQS LELP+ P
Sbjct: 181 PKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILSLELPHICYLP 240
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
NIRE FVYY+ F L+ G S+S + VP+V+ +VPY++LFKINH+VQNGTL
Sbjct: 241 NIREYFVYYEVHNDIFNLQPGYSYSSNTCFVPVVKSHYFTDVPYEILFKINHLVQNGTLS 300
Query: 1017 GPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSA 1196
GPTLDD F+RLVSP ++ ++ I+RALE MSYL+ +CL+P WL EQY K RS R+ S
Sbjct: 301 GPTLDDNFYRLVSPGYERIDRIKRALEKMSYLKKTCLNPTNWLSEQYKKMRRS-RVLTSP 359
Query: 1197 TISLDA-GLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMR 1373
I+LD GLVYV+RVQ+TP+KVYFYGPEINVSNRV+R+Y+ D+DNF+R+SFVDE+ +K+R
Sbjct: 360 NITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRNYAADLDNFLRISFVDEDCEKLR 419
Query: 1374 ATDLSPRNVSANG-NRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRP 1550
+TDLS R+ N RT++Y R+LS L NGI IGDK F+FLAFSSSQLRD+SAWMFASRP
Sbjct: 420 STDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFSSSQLRDNSAWMFASRP 479
Query: 1551 GLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG-GYVFS 1727
GL+A+ IR WMG+F NIRNVAKYAARLGQSFSSSTETL V ++EV+ PD+ G YVFS
Sbjct: 480 GLSASDIREWMGNFRNIRNVAKYAARLGQSFSSSTETLKVHKYEVKEAPDVTNGTEYVFS 539
Query: 1728 DGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYES 1904
DGIG IS DFA +V+ KC L+ TPSAFQIRYGGYKGVVA+DPTS KLSLRKSMSK++S
Sbjct: 540 DGIGTISADFADEVSKKCNLTRFTPSAFQIRYGGYKGVVAIDPTSQWKLSLRKSMSKFQS 599
Query: 1905 NNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDA 2084
+NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV D IFE KQ EAV +L+ ++ +P A DA
Sbjct: 600 DNITLDVLAYSKYQPCFLNRQLITLLSTLGVIDSIFELKQQEAVQQLNRMVAEPQAAIDA 659
Query: 2085 LGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMG 2264
+ +M GE TNI+KE+LLCGY+PD EP++SMLLQT+R KL EL+T+SRIF+P+GRAMMG
Sbjct: 660 IELMPMGEITNIVKELLLCGYRPDVEPYVSMLLQTFRASKLLELKTRSRIFVPKGRAMMG 719
Query: 2265 CLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPG 2444
CLDETRTL YGQVF+Q S S +G V+ G V+VAKNPC+HPG
Sbjct: 720 CLDETRTLKYGQVFIQAS----------------NSADDRGKSVVTGKVIVAKNPCIHPG 763
Query: 2445 DVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVP 2624
D++IL AV P L HM++C+VFPQ G RPHPNECSGSDLDGDIYFVSWDPDLIP R+ P
Sbjct: 764 DIRILQAVHSPLLGHMVNCVVFPQLGPRPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAP 823
Query: 2625 AMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMEL 2804
MDYTPAPT TLDH+V IEEV EYFTNY+VN+SLG+IANAH VFADR+ KA+S C++L
Sbjct: 824 -MDYTPAPTETLDHDVMIEEVHEYFTNYIVNESLGIIANAHVVFADRQSLKAESTQCIKL 882
Query: 2805 AKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
A+LFSIAVD+ KTGVPA+IP L+VKEYPDFMEKLD+ TY S+GVIGK++R IK
Sbjct: 883 AELFSIAVDYPKTGVPAQIPHELHVKEYPDFMEKLDRATYVSEGVIGKLYREIK 936
>ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Setaria
italica]
Length = 1123
Score = 1162 bits (3006), Expect = 0.0
Identities = 595/957 (62%), Positives = 723/957 (75%), Gaps = 9/957 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
GRTIQ+SGF +A VKDFLER G G+V+ALKLR P+ IT S+A+A+VQF T + A
Sbjct: 2 GRTIQVSGFALTDSAEYVKDFLERIAGAGTVYALKLRHPRNITATSKAFAIVQFQTQECA 61
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
+ AQ+ LR L R +RDIVPRPR +M+ + +H GC V + L+S
Sbjct: 62 SLVENAAQRNALRSRCIYLKARPADRDIVPRPRIAMFSLDAAALHLGCLVKENILYTLFS 121
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRR--SHDQKLNFLLIQVIAA 656
R+++V FGF+ +K+YF LS+ YKLELSYESIWE+QL R ++ + FLL QV AA
Sbjct: 122 VRNISVQFGFDMKKIYFYLSYNLIKYKLELSYESIWEMQLHRPPAYLSQTKFLLFQVQAA 181
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
P+I+E++ +YE+P N+F+ D+QW RT DFTPS SIGQSS CLE+P P
Sbjct: 182 PKIYELLPRRSGLMYEDPFFNWFRDDTDEQWTRTIDFTPSASIGQSSILCLEVPQQCELP 241
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
NI + FVYYKE F ++G S+S VPIV+ IEVPY++LFKINH+VQNGTL
Sbjct: 242 NIADYFVYYKEHNLDFECQKGYSYSCGNSFVPIVKSPDYIEVPYEILFKINHLVQNGTLS 301
Query: 1017 GPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSN-RIPKS 1193
GPTLDD FF LVSP P+++I+RAL MSYL+S+CL+P WL QY K +S + +S
Sbjct: 302 GPTLDDNFFCLVSPKHVPIDHIKRALLKMSYLKSTCLNPTNWLALQYSKIRKSRYALQRS 361
Query: 1194 ATISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMR 1373
+ ISLD GLVYVHRVQVTP+KVYFYGPEINVSNRV+RH+S D+DNF+R+SFVDE+ +K+R
Sbjct: 362 SGISLDDGLVYVHRVQVTPAKVYFYGPEINVSNRVVRHFSADLDNFLRISFVDEDCEKLR 421
Query: 1374 ATDLSPRNVSAN-GNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRP 1550
+ DLSPR+ S N RT++Y R+LS L NGI+IG K FEFLAFSSSQLRD+SAWMFASRP
Sbjct: 422 SVDLSPRSASGNDARRTALYNRVLSVLSNGISIGGKHFEFLAFSSSQLRDNSAWMFASRP 481
Query: 1551 GLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDI----EAGGY 1718
GLTA+ IR WMGDF NIRNVAKYAARLGQSFSSSTETL V R+EVE IPDI + Y
Sbjct: 482 GLTASDIRKWMGDFRNIRNVAKYAARLGQSFSSSTETLKVPRYEVEEIPDITDITDGTEY 541
Query: 1719 VFSDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSK 1895
+FSDGIGKIS +FA +VA+KC L PS FQIRYGGYKGVVA+DP S+ KLSLRKSMSK
Sbjct: 542 IFSDGIGKISANFALEVAMKCKLKRFAPSVFQIRYGGYKGVVAIDPASNRKLSLRKSMSK 601
Query: 1896 YESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVA 2075
++S NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV +FE KQ EAV +L+ ++T+P A
Sbjct: 602 FQSENITLDVLAYSKYQPCFLNRQLITLLSTLGVSGTVFELKQEEAVRQLNRMVTEPQAA 661
Query: 2076 RDALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRA 2255
+A+ +M GE TN++KE+L CGY+PD EP+LSMLLQT+R KL EL+TKSRIF+PQGRA
Sbjct: 662 SEAIELMPMGEVTNVVKELLSCGYQPDHEPYLSMLLQTFRASKLLELKTKSRIFIPQGRA 721
Query: 2256 MMGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCL 2435
MMGCLDETRTL YGQVF+Q S V+ G VVVAKNPCL
Sbjct: 722 MMGCLDETRTLKYGQVFIQASYCA----------------DDHRKFVVTGKVVVAKNPCL 765
Query: 2436 HPGDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRL 2615
HPGD+++L AVDVP LHHM DC+VFPQ+G RPHPNECSGSDLDGDIYFVSWD LIP R+
Sbjct: 766 HPGDIRVLHAVDVPYLHHMFDCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDQTLIPSRM 825
Query: 2616 NVPAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEAC 2795
V MDYTPAP LDH+VTIEE++EYFTNY+VN+SLG+IANAH VFAD+E KA+S C
Sbjct: 826 -VEPMDYTPAPADILDHDVTIEEIQEYFTNYIVNESLGIIANAHVVFADKERLKAESLPC 884
Query: 2796 MELAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
++LAKLFS+AVDF KTGVPA IP L+VKEYPDFMEKLDK TY+S GVIG+++R IK
Sbjct: 885 IKLAKLFSVAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYKSSGVIGRLYREIK 941
>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
brachyantha]
Length = 1113
Score = 1160 bits (3000), Expect = 0.0
Identities = 596/955 (62%), Positives = 721/955 (75%), Gaps = 5/955 (0%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+T+Q+SGF + TA VKD LER G G+V+ALKLR PK IT SRA+A+VQF + +
Sbjct: 1 MVGKTLQVSGFSLHDTAEYVKDLLERIVGSGNVYALKLRHPKNITATSRAFAIVQFQSEE 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+ + + AQ+ LR + L V +RDIVPRPR SM+ E +H GC + + S L
Sbjct: 61 HGSLVKIAAQRNILRSGRYYLKVHPSDRDIVPRPRVSMFKLEDATLHIGCLLRERVLSAL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKS--YKLELSYESIWEIQLRRSHDQKLNFLLIQVI 650
WS V+V FGFN +K+YF+L + S +KLELSYESIWEI+L R + FLLIQV
Sbjct: 121 WSRTKVSVEFGFNLKKIYFHLQLPSGSTEFKLELSYESIWEIELHRPPRSQTKFLLIQVE 180
Query: 651 AAPRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDST 830
AAP+I+E ++E+P NYF+ S DDQW RTTDFT S IGQS CLE+P
Sbjct: 181 AAPKIYEPTPRRSGVMFEDPSFNYFRDSTDDQWTRTTDFTASSCIGQSYILCLEVPCCRD 240
Query: 831 FPNIREQFVYYKEVEGHFYLERGSS-FSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNG 1007
PN RE F YYKE F +RG +S VPIV+ VPY++LFKINH+VQNG
Sbjct: 241 LPNFREYFFYYKEYNHDFECQRGGHPYSNDTRFVPIVKSPG--YVPYEILFKINHLVQNG 298
Query: 1008 TLMGPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIP 1187
+L GPT+D FFR+V+P F P+++I+RALE MSYL+ +CL+P WL EQY K RS +
Sbjct: 299 SLSGPTVDGSFFRMVNPAFFPIDHIKRALEMMSYLKKTCLNPTSWLSEQYSKLRRSRYVQ 358
Query: 1188 KSATISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADK 1367
S +I LD GLVYV+RVQVTP+KVYFYGPEINVSNRV+R++S DI+NF+R+SFVDE+ K
Sbjct: 359 ASPSILLDDGLVYVYRVQVTPAKVYFYGPEINVSNRVVRNFSADIENFLRISFVDEDCGK 418
Query: 1368 MRATDLSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASR 1547
+RATDLSPR++ + +T+++ R+LS L NGI IGDK FEFLAFSSSQLRD+SAWMFASR
Sbjct: 419 LRATDLSPRSLGPDAKKTALHNRVLSVLSNGITIGDKNFEFLAFSSSQLRDNSAWMFASR 478
Query: 1548 PGLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG-GYVF 1724
GLTA+ IR WMGDF NIRNVAKYAARLGQSFSSSTETL V +HEVE I DI G +VF
Sbjct: 479 QGLTASGIRKWMGDFRNIRNVAKYAARLGQSFSSSTETLKVYKHEVEEISDITNGTKHVF 538
Query: 1725 SDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYE 1901
SDGIGKIS FA +VA+KC L PSAFQIRYGGYKGVVAVDPTS KLSLRKSM K++
Sbjct: 539 SDGIGKISSAFAIEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSCWKLSLRKSMLKFQ 598
Query: 1902 SNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARD 2081
S+N +DVLAYSKYQP +LNRQ+ITLLSTLGV+D +FE KQ EAV +L+ ++T+P A +
Sbjct: 599 SDNTTVDVLAYSKYQPGFLNRQLITLLSTLGVRDSVFELKQKEAVNQLNRMVTEPQAAIE 658
Query: 2082 ALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMM 2261
A+ +M GE TN +KEMLLCGYKPD EP+LSMLLQT+R KL EL+TKSRIF+P+GRAMM
Sbjct: 659 AIELMPMGEITNAVKEMLLCGYKPDDEPYLSMLLQTFRASKLLELKTKSRIFIPKGRAMM 718
Query: 2262 GCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHP 2441
GCLDETRTL Y QVF+Q + S + ++ G VV+AKNPCLHP
Sbjct: 719 GCLDETRTLKYEQVFIQAT----------------SSANDNDKFIVTGKVVIAKNPCLHP 762
Query: 2442 GDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNV 2621
GD++IL AVD+P LHHM++C+VFPQ+G RPHPNECSGSDLDGDIYFVSWD LIP R+
Sbjct: 763 GDIRILQAVDLPVLHHMVNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDSTLIPPRMVA 822
Query: 2622 PAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACME 2801
P MDYTPAPT TLDH+VTIEEVEEYFTNY+VN+SLG+IANAH VFAD+E KA+S C+E
Sbjct: 823 P-MDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGIIANAHVVFADKEDLKAESSPCIE 881
Query: 2802 LAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
LAKLFSIAVDF KTGVPA+I L+VKEYPDFMEKLDK TYESKGVIGK++R IK
Sbjct: 882 LAKLFSIAVDFPKTGVPAQIRPELHVKEYPDFMEKLDKATYESKGVIGKLYREIK 936
>gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
Length = 1144
Score = 1159 bits (2998), Expect = 0.0
Identities = 595/982 (60%), Positives = 735/982 (74%), Gaps = 32/982 (3%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+TIQ+SGFPS A VKD LE+ G G+VFA+KLR PK I+ S+++A+VQF +
Sbjct: 1 MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + A++ LR L R ERDIVPRPRT+++ + +H GC + ++ SVL
Sbjct: 61 HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKALSVL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQ---- 644
WS +V+V FGF +++ F L + +K YKLELSYESIWEIQL R + FLLIQ
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLRDF 180
Query: 645 ------------VIAAPRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIG 788
V AAP+I+E S+Y++PL NYF+ DDQW RTTDFTPS SIG
Sbjct: 181 DNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIG 240
Query: 789 QSSAFCLELPYDSTFPNIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPY 968
QS CLELP+ PNIRE FVYY+ + F+L+RG S+S + VP+V+ +VPY
Sbjct: 241 QSYILCLELPHICYLPNIREYFVYYEVHDDVFHLQRGHSYSSNTCFVPVVKSHHFTDVPY 300
Query: 969 KVLFKINHMVQNGTLMGPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLH 1148
++LFKINH+VQNGTL GPTLDD F+RLVSP ++ +++I+RALE MSYL+ +CL+P KWL
Sbjct: 301 EILFKINHLVQNGTLSGPTLDDNFYRLVSPGYECIDHIKRALEKMSYLKKTCLNPTKWLS 360
Query: 1149 EQYLKFERSNRIPKSATISLDA-GLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDID 1325
EQY K RS + K I+LD GLVYV+RVQ+TP+KVYFYGPEINVSNRV+RHY+ D+D
Sbjct: 361 EQYKKKRRSRYMLKLPNITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRHYAADLD 420
Query: 1326 NFIRVSFVDEEADKMRATDLSPRNVSANGNR-TSIYRRILSTLRNGIAIGDKKFEFLAFS 1502
NF+R+SFVDE+ +K+R+TDLS R+ N R T++Y R+LS L NGI IGDK F+FLAFS
Sbjct: 421 NFLRISFVDEDCEKLRSTDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFS 480
Query: 1503 SSQLRDSSAWMFASRPGLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHE 1682
SSQLRD+SAWMFASRPGL+A+ IR WMGDF NIRNVAKYAARLGQSFSSSTETL V ++E
Sbjct: 481 SSQLRDNSAWMFASRPGLSASDIREWMGDFRNIRNVAKYAARLGQSFSSSTETLKVHKYE 540
Query: 1683 VEVIPDIEAGG-YVFSDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPT 1856
V+ PD+ G YVFSDGIG IS DFA +V+ KC L+ TPSAFQIRYGGYKGVVA+DPT
Sbjct: 541 VKEAPDVTNGTKYVFSDGIGTISADFADEVSKKCNLTRFTPSAFQIRYGGYKGVVAIDPT 600
Query: 1857 SSTKLSLRKSMSKYESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAV 2036
S KLSLRKSMSK++S NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV+D IFE KQ EAV
Sbjct: 601 SRWKLSLRKSMSKFQSENITLDVLAYSKYQPCFLNRQLITLLSTLGVRDSIFELKQQEAV 660
Query: 2037 TKLDMILTDPVVARDALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFEL 2216
+L+ ++ +P A DA+ +M GE TN++KE+LLCGY+PD EP++SMLLQT+R KL EL
Sbjct: 661 KQLNRMVAEPQAAIDAIELMPMGEVTNVVKELLLCGYQPDLEPYVSMLLQTFRASKLLEL 720
Query: 2217 RTKSRIFLPQGRAMMGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVV 2396
+T+SRIF+P+GRAMMGCLDETRTL YGQVF+Q S S +G +
Sbjct: 721 KTRSRIFVPKGRAMMGCLDETRTLKYGQVFIQAS----------------NSADDRGKSI 764
Query: 2397 LKGTVVVAKNPCLHPGDVQILSAVDVPDLHHMIDCIVFPQKGKR------------PHPN 2540
+ G VVVAKNPC+HPGD++IL AV P L HM++C+VFPQ G R PHPN
Sbjct: 765 VTGKVVVAKNPCIHPGDIRILQAVQSPLLGHMVNCVVFPQLGPRQVFSNAFFYVFQPHPN 824
Query: 2541 ECSGSDLDGDIYFVSWDPDLIPRRLNVPAMDYTPAPTITLDHEVTIEEVEEYFTNYMVND 2720
ECSGSDLDGDIYFVSWDPDLIP R+ P MDYTPAPT TLDH+V IEEV EYFTNY+VN+
Sbjct: 825 ECSGSDLDGDIYFVSWDPDLIPTRMVAP-MDYTPAPTETLDHDVMIEEVHEYFTNYIVNE 883
Query: 2721 SLGMIANAHTVFADREPRKADSEACMELAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFM 2900
SLG+IANAH VFADRE KA+S C++LA+LFSIAVD+ KTGVPA+IP L+VKEYPDFM
Sbjct: 884 SLGIIANAHVVFADREILKAESTPCIKLAELFSIAVDYPKTGVPAQIPPELHVKEYPDFM 943
Query: 2901 EKLDKPTYESKGVIGKMFRAIK 2966
EKLD+ TY S+G+IGK++R IK
Sbjct: 944 EKLDRATYVSEGIIGKLYREIK 965
>gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]
Length = 1252
Score = 1157 bits (2992), Expect = 0.0
Identities = 596/989 (60%), Positives = 735/989 (74%), Gaps = 39/989 (3%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+TIQ+SGFPS A VKD LE+ G G+VFA+KLR PK I+ S+++A+VQF +
Sbjct: 1 MGGKTIQVSGFPSTVNADHVKDLLEKIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + A++ LR L R ERDIVPRPRT+++ + +H GC + ++ SVL
Sbjct: 61 HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKVLSVL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVI-- 650
WS +V+V FGF +++ F L + +K YKLELSYESIWEIQL R + FLLIQ+
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLFLF 180
Query: 651 ---------------------AAPRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDF 767
AAP+I+E S+Y++PL NY + DDQW RTTDF
Sbjct: 181 IESSEIFVNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYSRDDTDDQWTRTTDF 240
Query: 768 TPSCSIGQSSAFCLELPYDSTFPNIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPR 947
TPS SIGQS CLELP+ PNIRE FVYY+ + F+L+RG S+S + VP+V+
Sbjct: 241 TPSASIGQSYILCLELPHICYLPNIREYFVYYEVHDDVFHLQRGHSYSSNTCFVPVVKSH 300
Query: 948 RGIEVPYKVLFKINHMVQNGTLMGPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCL 1127
+VPY++LFKINH+VQNGTL GPTLDD F+RLVSP ++ +++I+RALE MSYL+ +CL
Sbjct: 301 HFTDVPYEILFKINHLVQNGTLSGPTLDDNFYRLVSPGYECIDHIKRALEKMSYLKKTCL 360
Query: 1128 DPAKWLHEQYLKFERSNRIPKSATISLDA-GLVYVHRVQVTPSKVYFYGPEINVSNRVLR 1304
+P KWL EQY K RS + KS I+LD GLVYV+RVQ+TP+KVYFYGPEINVSNRV+R
Sbjct: 361 NPTKWLSEQYKKNRRSRYMLKSPNITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVR 420
Query: 1305 HYSEDIDNFIRVSFVDEEADKMRATDLSPRNVSANGNR-TSIYRRILSTLRNGIAIGDKK 1481
HY+ D+DNF+R+SFVDE+ +K+R+TDLS R+ N R T++Y R+LS L NGI IGDK
Sbjct: 421 HYAADLDNFLRISFVDEDCEKLRSTDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKH 480
Query: 1482 FEFLAFSSSQLRDSSAWMFASRPGLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTET 1661
F+FLAFSSSQLRD+SAWMFASR GL+A+ IR WMGDF NIRNVAKYAARLGQSFSSSTET
Sbjct: 481 FDFLAFSSSQLRDNSAWMFASRTGLSASDIREWMGDFRNIRNVAKYAARLGQSFSSSTET 540
Query: 1662 LTVGRHEVEVIPDIEAGG-YVFSDGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKG 1835
L V ++EV+ PD+ G YVFSDGIG IS DFA +V+ KC L+ TPSAFQIRYGGYKG
Sbjct: 541 LKVHKYEVKEAPDVTNGTKYVFSDGIGTISADFADEVSKKCNLTCFTPSAFQIRYGGYKG 600
Query: 1836 VVAVDPTSSTKLSLRKSMSKYESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFE 2015
VVA+DPTS KLSLRKSMSK++S NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV+D IFE
Sbjct: 601 VVAIDPTSRWKLSLRKSMSKFQSENITLDVLAYSKYQPCFLNRQLITLLSTLGVRDSIFE 660
Query: 2016 NKQHEAVTKLDMILTDPVVARDALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYR 2195
KQ EAV +L+ ++ +P A DA+ +M GE TN++KE+LLCGY+PD EP++SMLLQT+R
Sbjct: 661 LKQQEAVKQLNRMVAEPQAAIDAIELMPMGEVTNVVKELLLCGYQPDLEPYVSMLLQTFR 720
Query: 2196 TFKLFELRTKSRIFLPQGRAMMGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSE 2375
KL EL+T+SRIF+P+GRAMMGCLDETRTL YGQVF+QVS S
Sbjct: 721 ASKLLELKTRSRIFVPKGRAMMGCLDETRTLEYGQVFIQVS----------------NSA 764
Query: 2376 SGQGMVVLKGTVVVAKNPCLHPGDVQILSAVDVPDLHHMIDCIVFPQKGKR--------- 2528
+G ++ G VVVAKNPC+HPGD++IL AV P L HM++C+VFPQ G R
Sbjct: 765 DNRGKSIVTGKVVVAKNPCIHPGDIRILQAVQSPLLGHMVNCVVFPQLGPRQVFSNAFFY 824
Query: 2529 ---PHPNECSGSDLDGDIYFVSWDPDLIPRRLNVPAMDYTPAPTITLDHEVTIEEVEEYF 2699
PHPNECSGSDLDGDIYFVSWDPDLIP R+ P MDYTPAPT TLDH+V IEEV EYF
Sbjct: 825 VFQPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAP-MDYTPAPTETLDHDVMIEEVHEYF 883
Query: 2700 TNYMVNDSLGMIANAHTVFADREPRKADSEACMELAKLFSIAVDFNKTGVPAEIPAHLYV 2879
TNY+VN+SLG+IANAH VFADRE KA+S C++LA+LFSIAVD+ KTGVPA+IP L+V
Sbjct: 884 TNYIVNESLGIIANAHVVFADREILKAESTPCIKLAELFSIAVDYPKTGVPAQIPPELHV 943
Query: 2880 KEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
KEYPDFMEKLD+ TY SKGVIGK++R IK
Sbjct: 944 KEYPDFMEKLDRATYVSKGVIGKLYREIK 972
>gb|ACH53360.1| RNA-directed RNA polymerase 1a [Hordeum vulgare]
Length = 1114
Score = 1142 bits (2953), Expect = 0.0
Identities = 582/954 (61%), Positives = 724/954 (75%), Gaps = 4/954 (0%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+T+Q+SGFP+ VKD LE+ G G V A+KLR PK I+ SR++A+VQF T
Sbjct: 1 MGGKTLQVSGFPATVNVHHVKDLLEQIVGLGKVCAVKLRPPKNISANSRSFAIVQFETEA 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + A+ LR L VR ERDI+ +PRT+++ E +H GC + + SVL
Sbjct: 61 HASLVVNAARGNALRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAA 656
WS V+V FGF +K+ F L++ K YKLELSYESIWEIQL + FLLIQV+AA
Sbjct: 121 WSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAA 180
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
P+I+E + S+Y++PL NYF+ DDQW RTTDFTP SIGQS CLELP D P
Sbjct: 181 PKIYEQNLWHSGSMYDDPLFNYFRDDTDDQWTRTTDFTPLASIGQSYILCLELPADCYLP 240
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
NIRE F YYK F+ RG S+S + VPIV+ + +VPY++LFKIN++VQNG L
Sbjct: 241 NIREYFAYYKNHNHDFHCMRGHSYSSNSCFVPIVKSQYFTDVPYEILFKINNLVQNGILS 300
Query: 1017 GPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSA 1196
GPTLDD F+RLVSP + +++I+ ALENMSYL+ +CL+P WL E+Y + + S + S
Sbjct: 301 GPTLDDNFYRLVSPGYVCIDHIKHALENMSYLKKTCLNPINWLSEKYKEIQISRHMLTSP 360
Query: 1197 TISL-DAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMR 1373
I+L D GL YV+RVQ+TP+KVYFYGPEINVSNRV+R+YS D++NF+R+SFVDE+ +K+R
Sbjct: 361 NIALDDDGLAYVYRVQITPAKVYFYGPEINVSNRVVRNYSADLENFLRISFVDEDCEKLR 420
Query: 1374 ATDLSPRNVSA-NGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRP 1550
+TDLSPR N +RT++Y RILS L NGI IG+K FEFLAFSSSQLRD+SAWMFASR
Sbjct: 421 STDLSPRYAPGNNASRTALYNRILSVLSNGITIGNKHFEFLAFSSSQLRDNSAWMFASRT 480
Query: 1551 GLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG-GYVFS 1727
GL+A+ IR WMG+F NIRNVAKYAARLGQSFS+STETL V ++EV+ +P++ G YVFS
Sbjct: 481 GLSASDIREWMGNFRNIRNVAKYAARLGQSFSASTETLKVHKYEVQALPEVTNGTKYVFS 540
Query: 1728 DGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYES 1904
DGIG IS DFA +V+ KC L+ TPSAFQIRYGGYKGVVA+DP S KLSLR SMSK+ S
Sbjct: 541 DGIGTISADFADEVSRKCKLARFTPSAFQIRYGGYKGVVAIDPRSHWKLSLRSSMSKFPS 600
Query: 1905 NNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDA 2084
NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV+D+IFE KQ AV +L+ ++T+P A DA
Sbjct: 601 ENITLDVLAYSKYQPCFLNRQLITLLSTLGVRDNIFELKQQAAVMQLNRLVTEPQAAIDA 660
Query: 2085 LGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMG 2264
+ +M GE TN++KE+LLCGY+PD EP+LSM+LQT+R KL EL+TKSRIF+P+GRAMMG
Sbjct: 661 IELMPMGEITNVVKELLLCGYQPDVEPYLSMILQTFRASKLLELKTKSRIFIPEGRAMMG 720
Query: 2265 CLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPG 2444
CLDETRTL YG+VF+Q S S +ES + V+ G VVVAKNPCLHPG
Sbjct: 721 CLDETRTLKYGEVFIQASNS--------------ANESDK--FVVTGKVVVAKNPCLHPG 764
Query: 2445 DVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVP 2624
D++IL AV P L HM++C+VFPQ+G RPHPNECSGSDLDGDIYFVSWDPDLIP R+ P
Sbjct: 765 DIRILKAVYTPVLDHMVNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAP 824
Query: 2625 AMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMEL 2804
MDYTPAPT TLDH+V IEEV EYF NY+VN+SLG+IANAH VFAD+E KA+S C++L
Sbjct: 825 -MDYTPAPTETLDHDVVIEEVHEYFANYIVNESLGIIANAHVVFADKESLKAESTQCIKL 883
Query: 2805 AKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
A+LFSIAVD+ KTGVPA+IP+ L+V+EYPDFMEKLD+ TY SKGVIGK++R IK
Sbjct: 884 AELFSIAVDYPKTGVPAQIPSELHVREYPDFMEKLDRATYISKGVIGKLYREIK 937
>gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 1142 bits (2953), Expect = 0.0
Identities = 582/954 (61%), Positives = 725/954 (75%), Gaps = 4/954 (0%)
Frame = +3
Query: 117 MQGRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQ 296
M G+T+Q+SGFP+ VKD LE+ G G V A+KLR PK I+ SR++A+VQF T
Sbjct: 1 MGGKTLQVSGFPATVNVHHVKDLLEQIVGLGKVCAVKLRPPKNISANSRSFAIVQFETEA 60
Query: 297 NAGDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+A + A+ LR L VR ERDI+ +PRT+++ E +H GC + + SVL
Sbjct: 61 HASLVVNAARGNALRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVL 120
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAA 656
WS V+V FGF +K+ F L++ K YKLELSYESIWEIQL + FLLIQV+AA
Sbjct: 121 WSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAA 180
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
P+I+E + S+Y++PL NYF+ DDQW RTTDFTP SIGQS CLELP D P
Sbjct: 181 PKIYEQNLWHSGSMYDDPLFNYFRDDTDDQWTRTTDFTPLASIGQSYILCLELPADCYLP 240
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
NIRE FVYYK F+ RG S+S + VPIV+ + +VPY++LFKIN++VQNG L
Sbjct: 241 NIREYFVYYKNHNHDFHCMRGHSYSSNSCFVPIVKSQYFTDVPYEILFKINNLVQNGILS 300
Query: 1017 GPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSA 1196
GPTLDD F+ LVSP + +++I+ ALENMSYL+ +CL+P WL E+Y + + S + S
Sbjct: 301 GPTLDDNFYSLVSPGYVCIDHIKHALENMSYLKKTCLNPINWLSEKYKEIQISRHMLTSP 360
Query: 1197 TISL-DAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMR 1373
I+L D GL YV+RVQ+TP+KVYFYGPEINVSNRV+R+YS D++NF+R+SFVDE+ +K+R
Sbjct: 361 NIALDDDGLAYVYRVQITPAKVYFYGPEINVSNRVVRNYSADLENFLRISFVDEDCEKLR 420
Query: 1374 ATDLSPRNVSA-NGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRP 1550
+TDLSPR+ N +RT++Y RILS L NGI IG+K FEFLAFSSSQLRD+SAWMFASR
Sbjct: 421 STDLSPRSAPGNNASRTALYNRILSVLSNGITIGNKHFEFLAFSSSQLRDNSAWMFASRT 480
Query: 1551 GLTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAG-GYVFS 1727
GL+A+ IR WMG+F NIRNVAKYAARLGQSFS+STETL V ++EV+ +P++ G YVFS
Sbjct: 481 GLSASDIREWMGNFRNIRNVAKYAARLGQSFSASTETLKVHKYEVQALPEVTNGTKYVFS 540
Query: 1728 DGIGKISFDFAKKVAVKCGLSS-TPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYES 1904
DGIG IS DFA +V+ KC L+ TPSAFQIRYGGYKGVVA+DP S KLSLR SMSK+ S
Sbjct: 541 DGIGTISADFADEVSRKCKLARFTPSAFQIRYGGYKGVVAIDPRSHWKLSLRSSMSKFPS 600
Query: 1905 NNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARDA 2084
NI LDVLAYSKYQPC+LNRQ+ITLLSTLGV+D+IFE KQ AV +L+ ++T+P A DA
Sbjct: 601 ENITLDVLAYSKYQPCFLNRQLITLLSTLGVRDNIFELKQQAAVMQLNRLVTEPQAAIDA 660
Query: 2085 LGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMMG 2264
+ +M GE TN++KE+LLCGY+PD EP+LSM+LQT+R KL EL+TKSRIF+P+GRAMMG
Sbjct: 661 IELMPMGEITNVVKELLLCGYQPDVEPYLSMILQTFRASKLLELKTKSRIFIPEGRAMMG 720
Query: 2265 CLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHPG 2444
CLDETRTL YG+VF+Q S S +ES + V+ G VVVAKNPCLHPG
Sbjct: 721 CLDETRTLKYGEVFIQASNS--------------ANESDK--FVVTGKVVVAKNPCLHPG 764
Query: 2445 DVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNVP 2624
D++IL AV P L HM++C+VFPQ+G RPHPNECSGSDLDGDIYFVSWDPDLIP R+ P
Sbjct: 765 DIRILEAVYTPVLDHMVNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAP 824
Query: 2625 AMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACMEL 2804
MDYTPAPT TLDH+V IEEV EYF NY+VN+SLG+IANAH VFAD+E KA+S C++L
Sbjct: 825 -MDYTPAPTETLDHDVVIEEVHEYFANYIVNESLGIIANAHVVFADKESLKAESTQCIKL 883
Query: 2805 AKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
A+LFSIAVD+ KTGVPA+IP+ L+V+EYPDFMEKLD+ TY SKGVIGK++R IK
Sbjct: 884 AELFSIAVDYPKTGVPAQIPSKLHVREYPDFMEKLDRATYISKGVIGKLYREIK 937
>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
max] gi|571439308|ref|XP_006574822.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
max] gi|571439310|ref|XP_006574823.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
max]
Length = 1125
Score = 1139 bits (2947), Expect = 0.0
Identities = 578/956 (60%), Positives = 709/956 (74%), Gaps = 8/956 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TI++ GFP++ + VK F+E++TGEG+VFA+KLR K PR A+A++QF T +A
Sbjct: 2 GKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPR--AFAIIQFTTANSA 59
Query: 303 GDITLLAQQ--QRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVL 476
+ A + LRY L R+MERDIVPRPR ++ + +++ GC +SK FSVL
Sbjct: 60 TSMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVL 119
Query: 477 WSCRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAA 656
W +DV VNFG RK++F S N YKLELSYE+IW+I+L R ++ +LLIQ++ A
Sbjct: 120 WKKQDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGA 179
Query: 657 PRIFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFP 836
PR+FE +++++PL N+FK + D+QWIR DFTP IGQSSA CLELP P
Sbjct: 180 PRVFENDVPTSTNIFDDPLFNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLP 239
Query: 837 NIREQFVYYKEVEGHFYLERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLM 1016
N RE F YY+E E + L+ G FS++ LVPIV P G+++ Y +LFK+N +VQ+ L
Sbjct: 240 NFRENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLA 299
Query: 1017 GPTLDDKFFRLVSPVFKPLNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSA 1196
GP LD F+RLV P P +IE ALE + Y + C +P KWL +QY + S P+S
Sbjct: 300 GPALDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNHPRSP 359
Query: 1197 TISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRA 1376
ISLD GLVYV RVQ+TP KVYF GPE+NVSNRVLRH+ E IDNF+RVSFVDEE DK+ +
Sbjct: 360 AISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLFS 419
Query: 1377 TDLSPRNVSANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFA-SRPG 1553
TDLS R + +T IY RILS L+NGI +GDKKFEFLAFSSSQLR++S WMFA + G
Sbjct: 420 TDLSSR---SQNKKTEIYTRILSILKNGIVVGDKKFEFLAFSSSQLRENSLWMFAPTETG 476
Query: 1554 LTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDI-----EAGGY 1718
TAA+IR WMG+F IRNVAKYAARLGQSF SSTETL+V R EVE+IPD+ + Y
Sbjct: 477 CTAAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKKLTYDGNEY 536
Query: 1719 VFSDGIGKISFDFAKKVAVKCGLSSTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKY 1898
VFSDGIGKIS +FA+KVA KCG TPSAFQIRYGGYKGVVAVDP S KLSLRKSM KY
Sbjct: 537 VFSDGIGKISLEFAQKVAKKCGYDCTPSAFQIRYGGYKGVVAVDPKSCYKLSLRKSMRKY 596
Query: 1899 ESNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVAR 2078
+S+N KLDVLA SK+QPCYLNRQ+I+LLSTLG+KD +FE KQ E V +L+ ILTD + A+
Sbjct: 597 DSDNTKLDVLARSKFQPCYLNRQLISLLSTLGIKDDVFEKKQRETVNQLNTILTDSLKAQ 656
Query: 2079 DALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAM 2258
+ L +MS GE TN+LKEML+CGYKP+ EPFLSM+LQT+R KL ELR KSRIF+P+GRAM
Sbjct: 657 EVLDLMSAGEITNVLKEMLICGYKPNEEPFLSMMLQTFRASKLLELRLKSRIFIPKGRAM 716
Query: 2259 MGCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLH 2438
MGCLDETRTL YGQVFVQ S + D+ + S ++KG VVVAKNPCLH
Sbjct: 717 MGCLDETRTLEYGQVFVQFSNNRLQNLSDD-----FFSYDLPKNYMVKGKVVVAKNPCLH 771
Query: 2439 PGDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLN 2618
PGDV++L AVDVPDL+HM+DC+VFPQKG RPHPNECSGSDLDGDIYFV WD +LIP R
Sbjct: 772 PGDVRVLQAVDVPDLYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDHELIPSR-P 830
Query: 2619 VPAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACM 2798
+ MDYT T+ LDH+V IEEVEEYF NY+VNDSLG+IANAHTVFAD+E KA S+ C+
Sbjct: 831 IDPMDYTAPATVELDHDVMIEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMSDQCV 890
Query: 2799 ELAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
+LA+LFS AVDF KTGVPA IP L+VKEYPDFMEK DKPTY+S VIGK+FR +K
Sbjct: 891 KLARLFSTAVDFPKTGVPAVIPPELHVKEYPDFMEKPDKPTYKSHNVIGKLFREVK 946
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 1137 bits (2942), Expect = 0.0
Identities = 588/955 (61%), Positives = 711/955 (74%), Gaps = 7/955 (0%)
Frame = +3
Query: 123 GRTIQISGFPSNATATAVKDFLERHTGEGSVFALKLRLPKVITPRSRAYAVVQFLTTQNA 302
G+TI ISGFPS+ TA AVK+FLE HTG G+V+A+K+R PK R YA+VQF + A
Sbjct: 2 GKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPK--RGGGRLYAIVQFTSATQA 59
Query: 303 GDITLLAQQQRLRYNGFLLTVRDMERDIVPRPRTSMYVQEHIRMHSGCSVSKETFSVLWS 482
I LA Q RL Y L R E DIVP+PRT MY E + + GC VS E F VLW
Sbjct: 60 ELIISLANQ-RLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWE 118
Query: 483 CRDVTVNFGFNFRKLYFNLSFQNKSYKLELSYESIWEIQLRRSHDQKLNFLLIQVIAAPR 662
V FG RK+ F+L +++ Y+LELSYE IW+IQL DQ + +LLIQ+ APR
Sbjct: 119 GNVDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPR 178
Query: 663 IFEMVTINPLSVYENPLLNYFKISQDDQWIRTTDFTPSCSIGQSSAFCLELPYDSTFPNI 842
I++ V N +++NPLLN+FK + DDQW+RTTDFT SCSIGQSS+ CL+LP P
Sbjct: 179 IYKKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPF 238
Query: 843 REQFVYYKEVEGHFYL-ERGSSFSRSLDLVPIVEPRRGIEVPYKVLFKINHMVQNGTLMG 1019
++ F YY+E E F L + ++FS DL PIV+ R + +PYK+LFKIN +VQ G +
Sbjct: 239 KQNFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHV-LPYKILFKINALVQYGCIPW 297
Query: 1020 PTLDDKFFRLVSPVFKP-LNYIERALENMSYLRSSCLDPAKWLHEQYLKFERSNRIPKSA 1196
P LD F+RLV + + ++E ALE + +L+ DP+ +L EQY K+ R P S
Sbjct: 298 PLLDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHP--PNSP 355
Query: 1197 TISLDAGLVYVHRVQVTPSKVYFYGPEINVSNRVLRHYSEDIDNFIRVSFVDEEADKMRA 1376
ISLD GLVYV RVQ+TP KV+F GPE+NVSNRVLRH+S+ IDNF+RVSFVDEE DKMR+
Sbjct: 356 VISLDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRS 415
Query: 1377 TDLSPRNVS-ANGNRTSIYRRILSTLRNGIAIGDKKFEFLAFSSSQLRDSSAWMFASRPG 1553
TDL PR S + +T IYRRILS L+NGI IGDK F+FLAFSSSQLRD+S WMFAS P
Sbjct: 416 TDLLPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPD 475
Query: 1554 LTAAHIRNWMGDFHNIRNVAKYAARLGQSFSSSTETLTVGRHEVEVIPDIEAGG----YV 1721
+ AA+IR WMGDF +I+N AKYAARLGQSF SSTE L+V +E E+IPDIE YV
Sbjct: 476 IDAAYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYV 535
Query: 1722 FSDGIGKISFDFAKKVAVKCGLSSTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMSKYE 1901
FSDGIGKIS FAK+VA KCG + PSAFQIRYGGYKGVVAVDP S+ KLSLRKSM K+E
Sbjct: 536 FSDGIGKISSKFAKEVAAKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFE 595
Query: 1902 SNNIKLDVLAYSKYQPCYLNRQIITLLSTLGVKDHIFENKQHEAVTKLDMILTDPVVARD 2081
S+N KLDVL +SKYQPC+LNRQ+ITL+STLGV+D IFE KQ EAV +LD ILTDP+ A++
Sbjct: 596 SDNTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQE 655
Query: 2082 ALGIMSPGETTNILKEMLLCGYKPDAEPFLSMLLQTYRTFKLFELRTKSRIFLPQGRAMM 2261
AL +MSPGE TNILKEML CGY+PD EP+LSM+LQT+R KL ELRTKSRIF+P GRAMM
Sbjct: 656 ALELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMM 715
Query: 2262 GCLDETRTLNYGQVFVQVSPSGCSMFYDNGPSGLWGSESGQGMVVLKGTVVVAKNPCLHP 2441
GCLDETRTL YGQVFVQ+S ++ G E +V++G V VAKNPCLHP
Sbjct: 716 GCLDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREH---HLVIEGNVTVAKNPCLHP 772
Query: 2442 GDVQILSAVDVPDLHHMIDCIVFPQKGKRPHPNECSGSDLDGDIYFVSWDPDLIPRRLNV 2621
GDV++L AV++P L+HM+DC+VFPQKG RPHPNECSGSDLDGDIYFV WD +LIP R +
Sbjct: 773 GDVRVLKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSR-QI 831
Query: 2622 PAMDYTPAPTITLDHEVTIEEVEEYFTNYMVNDSLGMIANAHTVFADREPRKADSEACME 2801
P MDYTPAP LD +VT E+++EYF NYMVNDSLG+IANAHT FAD+E KA S C+E
Sbjct: 832 PPMDYTPAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLE 891
Query: 2802 LAKLFSIAVDFNKTGVPAEIPAHLYVKEYPDFMEKLDKPTYESKGVIGKMFRAIK 2966
LAKLFS+AVDF KTGVPA IP+HLYVKE+PDFMEK D+P+YES VIGK+FRA+K
Sbjct: 892 LAKLFSVAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVK 946