BLASTX nr result
ID: Stemona21_contig00003327
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00003327
(1323 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlise... 374 e-101
ref|XP_003529190.1| PREDICTED: splicing factor U2af small subuni... 373 e-101
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni... 373 e-100
ref|XP_006849930.1| hypothetical protein AMTR_s00022p00118880 [A... 369 2e-99
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu... 367 5e-99
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni... 366 1e-98
ref|XP_004498197.1| PREDICTED: splicing factor U2af small subuni... 366 1e-98
ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit fami... 363 1e-97
gb|ADE76244.1| unknown [Picea sitchensis] 362 1e-97
ref|XP_006605458.1| PREDICTED: splicing factor U2af small subuni... 361 3e-97
ref|XP_006654790.1| PREDICTED: splicing factor U2af small subuni... 358 4e-96
ref|XP_004300085.1| PREDICTED: splicing factor U2af small subuni... 350 8e-94
gb|EOX94588.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 347 5e-93
ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arab... 346 1e-92
ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidops... 346 1e-92
gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]... 346 1e-92
gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays] 345 2e-92
gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays] 345 2e-92
gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notab... 344 4e-92
ref|XP_004969477.1| PREDICTED: splicing factor U2af small subuni... 343 7e-92
>gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlisea aurea]
Length = 278
Score = 374 bits (961), Expect = e-101
Identities = 191/278 (68%), Positives = 200/278 (71%), Gaps = 1/278 (0%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPI+ RKIQEHFEDF+EDIFEELSKFGE+ESLN+CDNLADHM+GNVYVQFKEED
Sbjct: 61 GVDAQGQPIEARKIQEHFEDFFEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQ+EE+SCNRGGYCNFMHVK IGR+L
Sbjct: 121 QAAAALNALRGRFYSGRPIIADFSPVTDFREATCRQYEEDSCNRGGYCNFMHVKMIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
G
Sbjct: 181 RKKLFGRRQIRFWGRRSRSRSASPPHFHRRERDKERDRERDRDREVERREYRGGGG-RRQ 239
Query: 457 GGRRRH-ASPRMDRSATREGSEERRARIEQWNREREEK 347
G RRRH SPR RS REGSEERRARIEQWNREREEK
Sbjct: 240 GERRRHGGSPRRSRSPVREGSEERRARIEQWNREREEK 277
>ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Glycine max]
Length = 271
Score = 373 bits (958), Expect = e-101
Identities = 187/277 (67%), Positives = 201/277 (72%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRP+ISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDPQGQP+DPRKIQ+HFEDFYEDIF EL+KFG++ESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
LHGRFY+ RPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVK IGR+L
Sbjct: 121 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
+ + D
Sbjct: 181 RRRLFGRHHRGGSGTYHRVSRSRSRSRSRSGSPRHRRERHERDSRGRRSREREYRERDG- 239
Query: 457 GGRRRHASPRMDRSATREGSEERRARIEQWNREREEK 347
GGRRRH SP REGSEERRARIEQWNREREEK
Sbjct: 240 GGRRRHGSP------AREGSEERRARIEQWNREREEK 270
>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 373 bits (957), Expect = e-100
Identities = 190/277 (68%), Positives = 198/277 (71%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDPRKIQEHFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYVQFKEE+
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
G
Sbjct: 181 RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSGDKHGSDG----- 235
Query: 457 GGRRRHASPRMDRSATREGSEERRARIEQWNREREEK 347
G RR H SPR RS REGSEERRARIE WNREREE+
Sbjct: 236 GRRR-HGSPRRSRSPVREGSEERRARIELWNREREER 271
>ref|XP_006849930.1| hypothetical protein AMTR_s00022p00118880 [Amborella trichopoda]
gi|548853528|gb|ERN11511.1| hypothetical protein
AMTR_s00022p00118880 [Amborella trichopoda]
Length = 284
Score = 369 bits (946), Expect = 2e-99
Identities = 186/284 (65%), Positives = 203/284 (71%), Gaps = 6/284 (2%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMMTP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDPQGQ ++P+KIQEHFEDFYEDI+EELSKFGE+ESLN+CDNLADHMVGNVYVQFKEE+
Sbjct: 61 GVDPQGQAMEPQKIQEHFEDFYEDIYEELSKFGEIESLNVCDNLADHMVGNVYVQFKEEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
+ R+YSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVKQIGREL
Sbjct: 121 QAAAALQAMQYRYYSGRPIIIDFSPVTDFREATCRQYEENNCNRGGYCNFMHVKQIGREL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYD-- 464
HG YD
Sbjct: 181 RRKLFGRNRRYRRSRSRSRSVSPGHRRESERKGYGDHGRRSYDRYDKHGSHDRHGSYDKY 240
Query: 463 NDGGRR----RHASPRMDRSATREGSEERRARIEQWNREREEKN 344
+ GR RH SP+ RS REGSEERRARIEQWN+EREE +
Sbjct: 241 DRHGRHDRHGRHGSPKRTRSPVREGSEERRARIEQWNKEREENH 284
>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
small subunit, putative [Ricinus communis]
Length = 272
Score = 367 bits (943), Expect = 5e-99
Identities = 187/277 (67%), Positives = 194/277 (70%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDPRKIQEHFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
Sbjct: 181 RRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRDRDYRGNGRRSGDRHDRRRH 240
Query: 457 GGRRRHASPRMDRSATREGSEERRARIEQWNREREEK 347
G RR SP REGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSP------VREGSEERRARIEQWNREREEK 271
>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 366 bits (940), Expect = 1e-98
Identities = 188/281 (66%), Positives = 200/281 (71%), Gaps = 4/281 (1%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDPRKIQEHFEDFYEDI+EEL KFGE+ESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IG++L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
G
Sbjct: 181 RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDG----- 235
Query: 457 GGRRRHASPRMDRSAT----REGSEERRARIEQWNREREEK 347
G RR+ SPR RS + REGSEERRARIEQWNREREEK
Sbjct: 236 GRRRQ-GSPRRSRSRSPVIVREGSEERRARIEQWNREREEK 275
>ref|XP_004498197.1| PREDICTED: splicing factor U2af small subunit B-like isoform X1
[Cicer arietinum] gi|502123633|ref|XP_004498198.1|
PREDICTED: splicing factor U2af small subunit B-like
isoform X2 [Cicer arietinum]
Length = 278
Score = 366 bits (939), Expect = 1e-98
Identities = 182/277 (65%), Positives = 196/277 (70%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDP GQPIDPR+IQ+HFEDFYEDIF ELSKFG +E+LN+CDNLADHM+GNVYV F+EED
Sbjct: 61 GVDPNGQPIDPRQIQQHFEDFYEDIFLELSKFGYIETLNVCDNLADHMIGNVYVLFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
LHGRFYSGRPI+ADFSPVTDFREATCRQ+EENSCNRGGYCNFMHVK+IGREL
Sbjct: 121 HAAAALASLHGRFYSGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGREL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
D D
Sbjct: 181 RRKLFASQRSRSRSRSRSNSPRRRRSGDRGDRERRDRDRDYESRGRRSSDRDRDRVRDRD 240
Query: 457 GGRRRHASPRMDRSATREGSEERRARIEQWNREREEK 347
R R + S+ REGSEERRARIEQWNREREEK
Sbjct: 241 SRDREGGGRRRNGSSAREGSEERRARIEQWNREREEK 277
>ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit family protein [Populus
trichocarpa] gi|222857274|gb|EEE94821.1| U2 snRNP
auxiliary factor small subunit family protein [Populus
trichocarpa]
Length = 272
Score = 363 bits (931), Expect = 1e-97
Identities = 183/277 (66%), Positives = 193/277 (69%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSN Y RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQP+DP KIQEHFEDFYEDIFEELSKFGE+E+LN+CDNLADHM+GNVYVQFKEED
Sbjct: 61 GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IG++L
Sbjct: 121 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
G
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRRNDRDGGRKRH 240
Query: 457 GGRRRHASPRMDRSATREGSEERRARIEQWNREREEK 347
G RR SP REGSEERRARIEQWNREREEK
Sbjct: 241 GSPRRSRSP------VREGSEERRARIEQWNREREEK 271
>gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 362 bits (930), Expect = 1e-97
Identities = 180/280 (64%), Positives = 199/280 (71%), Gaps = 2/280 (0%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRP+ISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
G+DPQGQ +DPRKIQEHFEDF+EDIFEELSKFGE+E+LNICDNLADHMVGNVYVQF+EE+
Sbjct: 61 GLDPQGQAMDPRKIQEHFEDFFEDIFEELSKFGEIENLNICDNLADHMVGNVYVQFREEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
+ GRFYSGRPII DFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK+I ++L
Sbjct: 121 QAAAALKAMQGRFYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNFMHVKKINKDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
+ +
Sbjct: 181 RRKLFGRFRRFRGGRSRSRSRSLSPLPPPPPSRSRRYDDRGNGRRYEDRDYRSSDRDERR 240
Query: 457 GG--RRRHASPRMDRSATREGSEERRARIEQWNREREEKN 344
G R R SPR +RS R+GS ERRARIEQWNRERE +N
Sbjct: 241 GSVKRTRSRSPRRNRSPARDGSAERRARIEQWNRERESQN 280
>ref|XP_006605458.1| PREDICTED: splicing factor U2af small subunit A-like isoform X1
[Glycine max] gi|571563298|ref|XP_006605459.1| PREDICTED:
splicing factor U2af small subunit A-like isoform X2
[Glycine max]
Length = 268
Score = 361 bits (927), Expect = 3e-97
Identities = 183/276 (66%), Positives = 195/276 (70%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRP+ISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDPQGQ +DPRKIQ+HFEDFYEDIF EL+KFGE+ESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61 GVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFY+ RPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVK IGR+L
Sbjct: 121 QAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
G
Sbjct: 181 RRRLFGRNHRGGSGTYHRVSRSRSRSRSASPRYRRERRESDSRGGRRSRERDGSG----- 235
Query: 457 GGRRRHASPRMDRSATREGSEERRARIEQWNREREE 350
G RR+H SP REGSEERRARIEQWNREREE
Sbjct: 236 GRRRQHGSP-----PAREGSEERRARIEQWNREREE 266
>ref|XP_006654790.1| PREDICTED: splicing factor U2af small subunit B-like isoform X1
[Oryza brachyantha] gi|573944892|ref|XP_006654791.1|
PREDICTED: splicing factor U2af small subunit B-like
isoform X2 [Oryza brachyantha]
Length = 292
Score = 358 bits (918), Expect = 4e-96
Identities = 184/294 (62%), Positives = 197/294 (67%), Gaps = 17/294 (5%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPTI+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDP K+QEHFEDFYEDI+EELSKFGEVE+LN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPII ++SPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
G
Sbjct: 181 RRKLYGGRSRRSHGRSRSPSPRHRRGNRDRDDFRPRDRDGYRGGGGGGGGDSYRG---GG 237
Query: 457 GGRRRHASPRMD-----------------RSATREGSEERRARIEQWNREREEK 347
GG RR R D RS RE SEERRA+IEQWNREREEK
Sbjct: 238 GGGRRGGGSRYDRYDDGGRRRHGSPPRRARSPVRESSEERRAKIEQWNREREEK 291
>ref|XP_004300085.1| PREDICTED: splicing factor U2af small subunit B-like [Fragaria vesca
subsp. vesca]
Length = 280
Score = 350 bits (898), Expect = 8e-94
Identities = 162/180 (90%), Positives = 169/180 (93%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDPQGQP+DPRKIQ+HFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYVQFKEED
Sbjct: 61 GVDPQGQPLDPRKIQDHFEDFYEDIFEELDKFGEIESLNVCDNLADHMIGNVYVQFKEED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFY+GRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVK IGREL
Sbjct: 121 QAAAALQALQGRFYNGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGREL 180
Score = 62.8 bits (151), Expect = 3e-07
Identities = 32/47 (68%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
Frame = -3
Query: 466 DNDGGRRRHASPRMDRS-------ATREGSEERRARIEQWNREREEK 347
D D GRRRH SP R+ A REGSEERRARIEQWNREREEK
Sbjct: 233 DRDNGRRRHGSPGRSRTRSRSPVAAVREGSEERRARIEQWNREREEK 279
>gb|EOX94588.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1 [Theobroma
cacao] gi|508702693|gb|EOX94589.1| Zinc finger
C-x8-C-x5-C-x3-H type family protein isoform 1 [Theobroma
cacao]
Length = 279
Score = 347 bits (891), Expect = 5e-93
Identities = 162/180 (90%), Positives = 168/180 (93%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDP KIQEHFEDFYEDIFEELSKFGE+ESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61 GVDAQGQPIDPHKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKVIGREL 180
>ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata] gi|297309568|gb|EFH39992.1| hypothetical protein
ARALYDRAFT_494737 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 346 bits (888), Expect = 1e-92
Identities = 161/180 (89%), Positives = 168/180 (93%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDPQGQP+DP KIQ+HFEDFYEDIFEEL+KFGEVESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQ+EENSCNRGGYCNFMHVKQI REL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180
Score = 59.7 bits (143), Expect = 3e-06
Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Frame = -3
Query: 472 KYDNDGG-RRRHASPRMDRSA--TREGSEERRARIEQWNRERE 353
++D DGG RRRH SP+ RS REGSEERRARIEQWNRER+
Sbjct: 238 RHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERD 280
>ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small
subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName:
Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor,
small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor
small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor
small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small
subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small
subunit B [Arabidopsis thaliana]
Length = 283
Score = 346 bits (888), Expect = 1e-92
Identities = 161/180 (89%), Positives = 168/180 (93%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVDPQGQP+DP KIQ+HFEDFYEDIFEEL+KFGEVESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPIIADFSPVTDFREATCRQ+EENSCNRGGYCNFMHVKQI REL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180
Score = 61.6 bits (148), Expect = 7e-07
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
Frame = -3
Query: 472 KYDNDGG-RRRHASPRMDRSA--TREGSEERRARIEQWNREREE 350
++D DGG RRRH SP+ RS REGSEERRARIEQWNRER+E
Sbjct: 238 RHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDE 281
>gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit
isoform 2 [Zea mays] gi|413948481|gb|AFW81130.1| splicing
factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit
isoform 4 [Zea mays] gi|413948483|gb|AFW81132.1| splicing
factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 346 bits (887), Expect = 1e-92
Identities = 180/304 (59%), Positives = 196/304 (64%), Gaps = 27/304 (8%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDP K+QEHFEDFYEDI+EEL KFGE+E+LN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPII ++SPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGR+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
H +YD D
Sbjct: 181 RRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGRGRGSRHDRYD-D 239
Query: 457 GGRRRHASPRMDRSATREG---------------------------SEERRARIEQWNRE 359
G R R D A R G SEERRA+IEQWNRE
Sbjct: 240 GAGRGGRHDRYDDGAGRGGRYERYDDGGRRRHGSPPRRGRSPVRESSEERRAKIEQWNRE 299
Query: 358 REEK 347
RE K
Sbjct: 300 RESK 303
>gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 345 bits (886), Expect = 2e-92
Identities = 179/306 (58%), Positives = 196/306 (64%), Gaps = 29/306 (9%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDP K+QEHFEDFYEDI+EEL KFGE+E+LN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPII ++SPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGR+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYD-- 464
+YD
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 463 NDGGRRRHASPRMDRSATREG---------------------------SEERRARIEQWN 365
+DG R R D A R G SEERRA+IEQWN
Sbjct: 241 DDGAGRGGRHARYDDGAGRGGRHDRYDDGGRRRHGSPSRRARSPVRESSEERRAKIEQWN 300
Query: 364 REREEK 347
RERE K
Sbjct: 301 REREGK 306
>gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 345 bits (885), Expect = 2e-92
Identities = 179/306 (58%), Positives = 196/306 (64%), Gaps = 29/306 (9%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDP K+QEHFEDFYEDI+EEL KFGE+E+LN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPII ++SPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGR+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYD-- 464
+YD
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRDHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 463 NDGGRRRHASPRMDRSATREG---------------------------SEERRARIEQWN 365
+DG R R D A R G SEERRA+IEQWN
Sbjct: 241 DDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRHGSPSRRARSPVRESSEERRAKIEQWN 300
Query: 364 REREEK 347
RERE K
Sbjct: 301 REREGK 306
>gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notabilis]
Length = 348
Score = 344 bits (883), Expect = 4e-92
Identities = 160/180 (88%), Positives = 167/180 (92%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDP KIQEHFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYVQFKEED
Sbjct: 61 GVDAQGQPIDPHKIQEHFEDFYEDIFEELCKFGEIESLNVCDNLADHMIGNVYVQFKEED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFY+GRPIIADFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 HAAAALQALQGRFYNGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
>ref|XP_004969477.1| PREDICTED: splicing factor U2af small subunit B-like isoform X1
[Setaria italica] gi|514779946|ref|XP_004969478.1|
PREDICTED: splicing factor U2af small subunit B-like
isoform X2 [Setaria italica]
gi|514779950|ref|XP_004969479.1| PREDICTED: splicing
factor U2af small subunit B-like isoform X3 [Setaria
italica] gi|514779954|ref|XP_004969480.1| PREDICTED:
splicing factor U2af small subunit B-like isoform X4
[Setaria italica]
Length = 293
Score = 343 bits (881), Expect = 7e-92
Identities = 179/295 (60%), Positives = 191/295 (64%), Gaps = 16/295 (5%)
Frame = -3
Query: 1177 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP 998
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSR+HNRPTISPT++L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTLVLVNMYQRPDMITP 60
Query: 997 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEVESLNICDNLADHMVGNVYVQFKEED 818
GVD QGQPIDPRK+QEHFEDFYEDIFEELSKFGE+E+LN+CDNLADHM+GNVYVQF+EED
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 817 XXXXXXXXLHGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 638
L GRFYSGRPI+ DFSPVTDFREATCRQ+EENSCNRGGYCNFMHVKQIGR+L
Sbjct: 121 QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGRDL 180
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKYDND 458
Sbjct: 181 RKKLFGRYRRPHRGRSRSPSPVHRRERRDRDDYRHGGGGGGRGRDDYRGGGGGGRGRGRG 240
Query: 457 GGRRRHASPRMDRSATRE---GSEERRAR-------------IEQWNREREEKNG 341
GG RH R D R RRAR IEQWNREREEK G
Sbjct: 241 GGGSRH--ERYDDGGRRRHGGSPPPRRARSPVRENSEERRAKIEQWNREREEKQG 293