BLASTX nr result
ID: Stemona21_contig00002626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00002626
(400 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [B... 84 2e-14
gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticu... 80 2e-13
tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays] 80 3e-13
gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indi... 80 3e-13
gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii] 80 4e-13
gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu] 80 4e-13
tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays] 80 4e-13
ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831... 80 4e-13
gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japo... 80 4e-13
gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indi... 80 4e-13
gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays] 80 4e-13
ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group] g... 80 4e-13
ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [C... 79 5e-13
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr... 79 5e-13
ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [B... 79 5e-13
gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theob... 79 6e-13
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com... 79 6e-13
ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocar... 79 8e-13
gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus... 78 1e-12
gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus... 78 1e-12
>ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 115
Score = 84.0 bits (206), Expect = 2e-14
Identities = 47/75 (62%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Frame = +1
Query: 94 SLFEFPAPPPLHR----SRTIL*AMDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNR 261
+LF PAP L + S T +MD+Q GRTGSRGQVTQVRVKFLDDQNR
Sbjct: 27 ALFAPPAPSSLQQQQPPSPTAEESMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR 86
Query: 262 LIMRNVKGPVREGDI 306
LIMRNVKGP+REGDI
Sbjct: 87 LIMRNVKGPIREGDI 101
>gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
Length = 86
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +1
Query: 109 PAPPPLHRSRTIL*AMDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP 288
P+P P +MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP
Sbjct: 14 PSPTPQE-------SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP 66
Query: 289 VREGDI 306
VREGDI
Sbjct: 67 VREGDI 72
>tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays]
Length = 103
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = +1
Query: 151 AMDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
+MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 38 SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 89
>gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indica Group]
Length = 101
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = +1
Query: 151 AMDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
+MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 36 SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 87
>gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii]
Length = 107
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 43 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 93
>gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu]
Length = 115
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 51 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 101
>tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays]
Length = 68
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 4 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 54
>ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831577 [Brachypodium
distachyon]
Length = 554
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 151 AMDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
+MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 489 SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 540
>gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japonica Group]
Length = 93
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 29 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 79
>gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indica Group]
Length = 400
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 336 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 386
>gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group]
gi|226492207|ref|NP_001147283.1| 40S ribosomal protein
S28 [Zea mays] gi|226528567|ref|NP_001147474.1| 40S
ribosomal protein S28 [Zea mays]
gi|226530547|ref|NP_001147106.1| 40S ribosomal protein
S28 [Zea mays] gi|297600386|ref|NP_001049079.2|
Os03g0167100 [Oryza sativa Japonica Group]
gi|242042107|ref|XP_002468448.1| hypothetical protein
SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|514816860|ref|XP_004983165.1| PREDICTED: 40S
ribosomal protein S28-like [Setaria italica]
gi|514821804|ref|XP_004985578.1| PREDICTED: 40S
ribosomal protein S28-like [Setaria italica]
gi|582044877|pdb|3J60|CC Chain c, Localization Of The
Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|113639193|dbj|BAF26498.1| Os10g0411700 [Oryza sativa
Japonica Group] gi|194704454|gb|ACF86311.1| unknown [Zea
mays] gi|195605026|gb|ACG24343.1| 40S ribosomal protein
S28 [Zea mays] gi|195605034|gb|ACG24347.1| 40S ribosomal
protein S28 [Zea mays] gi|195607258|gb|ACG25459.1| 40S
ribosomal protein S28 [Zea mays]
gi|195609472|gb|ACG26566.1| 40S ribosomal protein S28
[Zea mays] gi|195609816|gb|ACG26738.1| 40S ribosomal
protein S28 [Zea mays] gi|195610066|gb|ACG26863.1| 40S
ribosomal protein S28 [Zea mays]
gi|195611640|gb|ACG27650.1| 40S ribosomal protein S28
[Zea mays] gi|195618106|gb|ACG30883.1| 40S ribosomal
protein S28 [Zea mays] gi|195618338|gb|ACG30999.1| 40S
ribosomal protein S28 [Zea mays]
gi|195618690|gb|ACG31175.1| 40S ribosomal protein S28
[Zea mays] gi|195619662|gb|ACG31661.1| 40S ribosomal
protein S28 [Zea mays] gi|195620148|gb|ACG31904.1| 40S
ribosomal protein S28 [Zea mays]
gi|195655603|gb|ACG47269.1| 40S ribosomal protein S28
[Zea mays] gi|195655989|gb|ACG47462.1| 40S ribosomal
protein S28 [Zea mays] gi|222612816|gb|EEE50948.1|
hypothetical protein OsJ_31495 [Oryza sativa Japonica
Group] gi|241922302|gb|EER95446.1| hypothetical protein
SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|255674234|dbj|BAF10993.2| Os03g0167100 [Oryza sativa
Japonica Group] gi|326509929|dbj|BAJ87180.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326526071|dbj|BAJ93212.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|413956006|gb|AFW88655.1| 40S
ribosomal protein S28 isoform 1 [Zea mays]
gi|413956007|gb|AFW88656.1| 40S ribosomal protein S28
isoform 2 [Zea mays] gi|414865013|tpg|DAA43570.1| TPA:
40S ribosomal protein S28 [Zea mays]
gi|414866364|tpg|DAA44921.1| TPA: 40S ribosomal protein
S28 isoform 1 [Zea mays] gi|414866365|tpg|DAA44922.1|
TPA: 40S ribosomal protein S28 isoform 2 [Zea mays]
gi|414866366|tpg|DAA44923.1| TPA: 40S ribosomal protein
S28 isoform 3 [Zea mays] gi|414866367|tpg|DAA44924.1|
TPA: 40S ribosomal protein S28 isoform 4 [Zea mays]
gi|474386341|gb|EMS64988.1| 40S ribosomal protein S28
[Triticum urartu] gi|475553296|gb|EMT11959.1| 40S
ribosomal protein S28 [Aegilops tauschii]
Length = 65
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [Citrus sinensis]
Length = 65
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 51
>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
gi|557532022|gb|ESR43205.1| hypothetical protein
CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 50 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 100
>ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 65
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MD+Q GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 51
>gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
Length = 65
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 51
>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
ribosomal protein S28, putative [Ricinus communis]
gi|223539919|gb|EEF41497.1| ribosomal protein S28,
putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
40S ribosomal protein S28A [Hevea brasiliensis]
gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
[Hevea brasiliensis]
Length = 65
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/51 (76%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGD+
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 51
>ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocarpa]
gi|224110082|ref|XP_002315409.1| 40S ribosomal protein
S28 [Populus trichocarpa] gi|118481584|gb|ABK92734.1|
unknown [Populus trichocarpa]
gi|118481768|gb|ABK92823.1| unknown [Populus
trichocarpa] gi|118482102|gb|ABK92982.1| unknown
[Populus trichocarpa] gi|118482699|gb|ABK93268.1|
unknown [Populus trichocarpa]
gi|222851745|gb|EEE89292.1| 40S ribosomal protein S28
[Populus trichocarpa] gi|222864449|gb|EEF01580.1| 40S
ribosomal protein S28 [Populus trichocarpa]
Length = 65
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/51 (76%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKF+DDQNR IMRNVKGPVREGDI
Sbjct: 1 MDSQIKHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDI 51
>gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus vulgaris]
Length = 65
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 1 MDSQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
>gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus vulgaris]
Length = 65
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +1
Query: 154 MDSQXXXXXXXXXXGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 306
MDSQ GRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 1 MDSQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51