BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00000013
         (2245 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              556   e-155
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   554   e-155
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        543   e-151
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   542   e-151
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   539   e-150
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   524   e-146
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   512   e-142
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   511   e-142
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     510   e-142
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   506   e-140
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   497   e-137
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   491   e-136
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   486   e-134
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   484   e-134
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   484   e-134
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   481   e-133
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   481   e-133
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   479   e-132
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      476   e-131
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   467   e-129

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  556 bits (1433), Expect = e-155
 Identities = 313/577 (54%), Positives = 363/577 (62%), Gaps = 10/577 (1%)
 Frame = +2

Query: 215  MACLVPQFKCPSSSDAHFRPCLLLHVKPRDHVCLRSHCVLS--------SMTAVVDVDKV 370
            M+CL+PQFKCP  + +   P L +  K R+ +  R  C LS        S TAV+D++K+
Sbjct: 1    MSCLLPQFKCPPDTFST-HPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKL 59

Query: 371  HIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXXXXXXXXXXXXXX 550
             +   E+ H  S+AA RP TY+G VGPP E +F A+L++                     
Sbjct: 60   RLPSLES-HSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVAL 118

Query: 551  XXXXXXX-KDAAQMTGHNLSMKIE-KSEDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSE 724
                    KDAA++ G N S K E K   F    D              +G + DS  +E
Sbjct: 119  AKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAE 178

Query: 725  TNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXXX 904
            T     N+  ++++D+D    T       + + S  I VRS RQ                
Sbjct: 179  TGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASA 238

Query: 905  XXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXX 1084
                            ++QEVDY DP                    +LSEGIQD      
Sbjct: 239  GVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEK 298

Query: 1085 XXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQG 1264
                     G +PTF QWA A GVDQ+TLR+R NYGI+CKDKMIKSNIRLVISIAKNYQG
Sbjct: 299  LQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQG 358

Query: 1265 AGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 1444
            AGMN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM
Sbjct: 359  AGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 418

Query: 1445 VEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQN 1624
            VEATYRVKEARKQLYSENGR P+NEEVAEA GLSMKRL AVLLTPKAPRSLDQKIGINQN
Sbjct: 419  VEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQN 478

Query: 1625 LKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEI 1804
            LKPSE+IADPDAETAE +LIKQFM++DL+KVLNSLNPREKQVIRWR+GLEDGR KTLQEI
Sbjct: 479  LKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEI 538

Query: 1805 GEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            GE+MGVSRERIRQIESCAF            QQY+ S
Sbjct: 539  GELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  554 bits (1428), Expect = e-155
 Identities = 314/582 (53%), Positives = 363/582 (62%), Gaps = 15/582 (2%)
 Frame = +2

Query: 215  MACLVPQFKCPSSSDAHFRPCLLLHV-----KPRDHVCLRSHCVLS--------SMTAVV 355
            M+CL+PQFKCP  +   F     LH+     K R+ +  R  C LS        S TAV+
Sbjct: 1    MSCLLPQFKCPPDT---FSTHPKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVL 57

Query: 356  DVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXXXXXXXXX 535
            D++K+ +   E+ H  S+AA RP TY+G VGPP E +F A+L++                
Sbjct: 58   DIEKLRLPSLES-HSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAA 116

Query: 536  XXXXXXXXXXXX-KDAAQMTGHNLSMKIE-KSEDFPFQTDIXXXXXXXXXXXXHVGTITD 709
                         KDAA++ G N S K E K   F    D              +G + D
Sbjct: 117  EAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGD 176

Query: 710  STTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXX 889
            S  +ET     N+  ++++D+D    T       + + S  I VRS RQ           
Sbjct: 177  SVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAA 236

Query: 890  XXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDX 1069
                                 ++QEVDY DP                    +LSEGIQD 
Sbjct: 237  EKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDL 296

Query: 1070 XXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIA 1249
                          G +PTF QWA A GVDQ+TLR+R NYGI+CKDKMIKSNIRLVISIA
Sbjct: 297  LKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIA 356

Query: 1250 KNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 1429
            KNYQGAGMN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR
Sbjct: 357  KNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 416

Query: 1430 LPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKI 1609
            LPFHMVEATYRVKEARKQLYSENGR P+NEEVAEA GLSMKRL AVLLTPKAPRSLDQKI
Sbjct: 417  LPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKI 476

Query: 1610 GINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMK 1789
            GINQNLKPSE+IADPDAETAE +LIKQFM++DL+KVLNSLNPREKQVIRWR+GLEDGR K
Sbjct: 477  GINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTK 536

Query: 1790 TLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            TLQEIGE+MGVSRERIRQIESCAF            QQY+ S
Sbjct: 537  TLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 578


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  543 bits (1398), Expect = e-151
 Identities = 315/621 (50%), Positives = 363/621 (58%), Gaps = 54/621 (8%)
 Frame = +2

Query: 215  MACLVPQFKC-PSSSDAHFRP------------------------------------CLL 283
            M+CL+PQFKC P +    FR                                       +
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 284  LHVKPRDHVCLRSHCVLSSM--------TAVVDVDKVHIHQAEAPHPTSLAASRPLTYLG 439
            +  K ++H+C R+ CVLS+         TAV+DV+K+ +   EA HP S+A  RP TY+G
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEA-HPNSVAVDRPWTYIG 119

Query: 440  AVGPPRETDFAASL-SKXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKI 616
            A GPP E    A+L +                             KDAA M  +    K 
Sbjct: 120  ATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKT 179

Query: 617  EKSEDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSETNPYKENANHNISKDADSFVATSN 796
            E      F TD               G I DS T E+   ++++  N + ++D    T+ 
Sbjct: 180  EMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNE 239

Query: 797  VNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYY 976
                 + Q S  IAVRS RQT                                +Q+VDY 
Sbjct: 240  ELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYS 299

Query: 977  DPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGV 1156
            DP                    +LSEGIQD               GGQPTF QWA A GV
Sbjct: 300  DPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGV 359

Query: 1157 DQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFD 1336
            DQ+TLR R+NYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFD
Sbjct: 360  DQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 419

Query: 1337 ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDN 1516
            ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR PDN
Sbjct: 420  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDN 479

Query: 1517 EEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPS--------EIIADPDAETAE 1672
            EEVAEA GLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPS        E+IADP+AETAE
Sbjct: 480  EEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAE 539

Query: 1673 SILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIES 1852
             +LIKQFM++DL+KVL+SL+ RE+QVIRWRFG+EDGRMKTLQEIGE+MGVSRERIRQIES
Sbjct: 540  DMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIES 599

Query: 1853 CAFXXXXXXXXXXXXQQYITS 1915
            CAF            QQY+ S
Sbjct: 600  CAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  542 bits (1397), Expect = e-151
 Identities = 316/589 (53%), Positives = 358/589 (60%), Gaps = 20/589 (3%)
 Frame = +2

Query: 209  RNMACLVPQFKC-PSSSDAHFRPCLLLH---------VKPRDHVCLRSHCVLSS------ 340
            +NM+CL+PQFKC P +   HFR    LH          K ++ +C R+HCVLS+      
Sbjct: 22   KNMSCLLPQFKCQPDTFSIHFRT---LHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTS 78

Query: 341  --MTAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXX 514
              MT V+DV+K+ +   EA H  ++AA+R  TY GAVGP  E +   SL+          
Sbjct: 79   TAMTTVLDVEKLRLPSLEA-HSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAV 137

Query: 515  XXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHV 694
                               KDAA M  H+ S K +         D               
Sbjct: 138  IAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTERERA 197

Query: 695  GTITDSTTSETNPYKENANHN-ISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXX 871
              I DS   E  P +E +    ++K AD    T    +  + Q S  IAVRS RQT    
Sbjct: 198  SIIGDSVIVEAAPEEEYSEQQPLNKSAD-LEPTHEELKLLEEQVSQSIAVRSRRQTERKA 256

Query: 872  XXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLS 1051
                                       +VQEVDY DP                    QLS
Sbjct: 257  RRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLS 316

Query: 1052 EGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIR 1231
             GIQD               GG PTF QWA A GVDQR LR+R+NYGI CKDKMI SNIR
Sbjct: 317  AGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIR 376

Query: 1232 LVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 1411
            LVISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 377  LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 436

Query: 1412 QSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPR 1591
            QSRTIRLPFHMVEATYRVKEARKQLYSENGR P+NEEVAEA GLSMKRL AVLLTPKAPR
Sbjct: 437  QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPR 496

Query: 1592 SLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGL 1771
            SLDQK GINQNLKPSE+IADP+AETAE +LIK+FMK+DL+KVL++LNPRE+QV+RWRFGL
Sbjct: 497  SLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGL 556

Query: 1772 EDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQY-ITS 1915
            EDGRMKTLQEIGE+MGVSRERIRQIES AF             QY ITS
Sbjct: 557  EDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAITS 605


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  539 bits (1388), Expect = e-150
 Identities = 314/589 (53%), Positives = 357/589 (60%), Gaps = 20/589 (3%)
 Frame = +2

Query: 209  RNMACLVPQFKC-PSSSDAHFRPCLLLH---------VKPRDHVCLRSHCVLSS------ 340
            +NM+CL+PQFKC P +   HFR    LH          K ++ +C R+HCVLS+      
Sbjct: 22   KNMSCLLPQFKCQPDTFSIHFRT---LHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTS 78

Query: 341  --MTAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXX 514
              MT V+DV+K+ +   EA H  ++AA+R  TY GAVGP  E +   SL+          
Sbjct: 79   TAMTTVLDVEKLRLPSLEA-HSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAV 137

Query: 515  XXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHV 694
                               KDAA M  H+ S K +         D               
Sbjct: 138  IAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTSTSMWAQLTERERA 197

Query: 695  GTITDSTTSETNPYKENANHN-ISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXX 871
              I DS   E  P +E +    ++K AD    T    +  + Q S  IAVRS RQT    
Sbjct: 198  SIIGDSVIVEAAPEEEYSEQQPLNKSAD-LEPTHEELKLLEEQVSQSIAVRSRRQTERKA 256

Query: 872  XXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLS 1051
                                       +VQEVDY DP                    QLS
Sbjct: 257  RRTRAAEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLS 316

Query: 1052 EGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIR 1231
             GIQD               GG PTF QWA A GVDQR LR+R+NYGI CKDKMI SNIR
Sbjct: 317  AGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIR 376

Query: 1232 LVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 1411
            LVISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 377  LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 436

Query: 1412 QSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPR 1591
            QSRTIRLPFHMVEATYRVKEARKQLYSENGR P+NEEVA+A GLSMKRL AVLL PKAPR
Sbjct: 437  QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAPR 496

Query: 1592 SLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGL 1771
            SLDQK GINQNLKPSE+IADP+AETAE +LIK+FMK+DL+KVL++LNPRE+QV+RWRFGL
Sbjct: 497  SLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGL 556

Query: 1772 EDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQY-ITS 1915
            EDGRMKTLQEIGE+MGVSRERIRQIES AF             QY ITS
Sbjct: 557  EDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAITS 605


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  524 bits (1350), Expect = e-146
 Identities = 287/545 (52%), Positives = 345/545 (63%), Gaps = 3/545 (0%)
 Frame = +2

Query: 290  VKPRDHVCLRSHCVLSSMTAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDF 469
            V+ R+  C ++ CV S+ T VVDVDKV +      H TS++   PLTY+G +G  ++TDF
Sbjct: 26   VRTREATCFQTQCVSSTATVVVDVDKVRVPSLGG-HSTSVSTHGPLTYVGTIGSQKKTDF 84

Query: 470  AASL-SKXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKIEKSEDFPFQT 646
             A+L ++                            KDAA M G     + +K +DFP + 
Sbjct: 85   EAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSEA 144

Query: 647  DIXXXXXXXXXXXXHVGTITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQ--DTQ 820
            DI             +G++  S+ +   P  ++ + N     +     S  N  +    Q
Sbjct: 145  DILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENILEALQLQ 204

Query: 821  HSTRIAVRSGRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXX 1000
            HS R+AVRS RQT                                +QE+DY DP      
Sbjct: 205  HSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRG 264

Query: 1001 XXXXXXXXXXXXXXQLSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKR 1180
                          +LSEGIQD               GG+PTF QWA A G+DQ+ LR+R
Sbjct: 265  TTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRR 324

Query: 1181 INYGIQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFS 1360
            ++YG  CKDKMIKSNIRLVISIAKNYQG G+++QDLVQEGCRGLV+GAEKFDASKGFKFS
Sbjct: 325  LSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFS 384

Query: 1361 TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAG 1540
            TYAHWWIKQAVRKSLSDQSRTIRLPFHMV+ATYRV+EA KQLYSENGR P++EEVAEA G
Sbjct: 385  TYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATG 444

Query: 1541 LSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVL 1720
            LSMKRLT VLLTPKAPRSLDQKIGINQNLKPSE+I+DP+AETAE +L+KQFMKQDL+KVL
Sbjct: 445  LSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVL 504

Query: 1721 NSLNPREKQVIRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQ 1900
            N+LNPREKQV+RWRFGLEDGRMKTLQEIGE+MGVSRERIRQIES AF            +
Sbjct: 505  NTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNLR 564

Query: 1901 QYITS 1915
            QY+ S
Sbjct: 565  QYLLS 569


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  512 bits (1319), Expect = e-142
 Identities = 302/578 (52%), Positives = 351/578 (60%), Gaps = 13/578 (2%)
 Frame = +2

Query: 215  MACLVPQFKC-PSSSDAHFRPC------LLLHVKPRDHVCLRSHCVLSSM-----TAVVD 358
            M+CL+PQFKC P +   HFR        +    K R+ +  R+ C+LS+      TAV+D
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVLD 61

Query: 359  VDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLS-KXXXXXXXXXXXXXXXX 535
            ++K+ +   EAP   S+A + P TY           F ++L+ +                
Sbjct: 62   LEKLRLPSFEAPSD-SIAPNSPWTY---------ATFGSTLATETLITSDEAVIAAAAAE 111

Query: 536  XXXXXXXXXXXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHVGTITDST 715
                        KDAA +  +  S + E     P   D              +  I DS 
Sbjct: 112  AVALARAAVKVAKDAALLVKNFPSAETESKLTSPSTIDASRWPQFTETERARI--IGDSV 169

Query: 716  TSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXX 895
             +ET P +E++  +  K++D    T         Q S  IAVRS RQT            
Sbjct: 170  ATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEK 229

Query: 896  XXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXX 1075
                               ++QEVDY DP                    +LS  IQD   
Sbjct: 230  AASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLK 289

Query: 1076 XXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKN 1255
                        GGQPTF QWA A GVDQRTLRKRIN+G  CKDKMIKSNIRLVISIAKN
Sbjct: 290  LERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKN 349

Query: 1256 YQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1435
            YQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 350  YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 409

Query: 1436 FHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGI 1615
            FHMVEATYRVKEARKQLYSENGR PD+EEVAEAAGLSMKRL+AVLLTPKAPRSLDQKIG+
Sbjct: 410  FHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGM 469

Query: 1616 NQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTL 1795
            N +LKPSE+IADP+AETAE +L+KQFMKQDL+KVLN+LNPRE QV+RWRFGLEDGRMKTL
Sbjct: 470  NMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTL 529

Query: 1796 QEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYI 1909
            QEIGEIMGVSRERIRQIES AF            +QY+
Sbjct: 530  QEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYL 567


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  511 bits (1315), Expect = e-142
 Identities = 293/527 (55%), Positives = 326/527 (61%), Gaps = 2/527 (0%)
 Frame = +2

Query: 341  MTAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXXXX 520
            MT V+DV+K+ +   EA H  ++AA+R  TY GAVGP  E +   SL+            
Sbjct: 1    MTTVLDVEKLRLPSLEA-HSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIA 59

Query: 521  XXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHVGT 700
                             KDAA M  H+ S K +         D                 
Sbjct: 60   AASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTERERASI 119

Query: 701  ITDSTTSETNPYKENANHN-ISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXX 877
            I DS   E  P +E +    ++K AD    T    +  + Q S  IAVRS RQT      
Sbjct: 120  IGDSVIVEAAPEEEYSEQQPLNKSAD-LEPTHEELKLLEEQVSQSIAVRSRRQTERKARR 178

Query: 878  XXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEG 1057
                                     +VQEVDY DP                    QLS G
Sbjct: 179  TRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAG 238

Query: 1058 IQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLV 1237
            IQD               GG PTF QWA A GVDQR LR+R+NYGI CKDKMI SNIRLV
Sbjct: 239  IQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLV 298

Query: 1238 ISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 1417
            ISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 299  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 358

Query: 1418 RTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSL 1597
            RTIRLPFHMVEATYRVKEARKQLYSENGR P+NEEVAEA GLSMKRL AVLLTPKAPRSL
Sbjct: 359  RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSL 418

Query: 1598 DQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLED 1777
            DQK GINQNLKPSE+IADP+AETAE +LIK+FMK+DL+KVL++LNPRE+QV+RWRFGLED
Sbjct: 419  DQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLED 478

Query: 1778 GRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQY-ITS 1915
            GRMKTLQEIGE+MGVSRERIRQIES AF             QY ITS
Sbjct: 479  GRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAITS 525


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  510 bits (1314), Expect = e-142
 Identities = 301/586 (51%), Positives = 355/586 (60%), Gaps = 19/586 (3%)
 Frame = +2

Query: 215  MACLVPQFKC-PSSSDAHFR------PCLLLHVKPRDHVCLRSHCVLSSM--------TA 349
            M+CL+PQF C P +  A F       P    H+     +   + CVLS+         T 
Sbjct: 1    MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARDINSLAQCVLSTTSPSTSVGATY 60

Query: 350  VVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLS-KXXXXXXXXXXXXX 526
            V+ V+K+     +A +  S+ ++RP TY GA GPP E +F A+L+ +             
Sbjct: 61   VLSVEKLRFPSLDA-NSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAAA 119

Query: 527  XXXXXXXXXXXXXXXKDAAQMTGHNL---SMKIEKSEDFPFQTDIXXXXXXXXXXXXHVG 697
                           KDAA +   +    S+ +  SE    +T                 
Sbjct: 120  AAEAVTLAKAAVKVAKDAALLVRPSTRAESISLVSSEARNIKT------------AQAAS 167

Query: 698  TITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXX 877
             + DS  +E    +++   + +K+++    T+   R    Q S  IAVRS RQ+      
Sbjct: 168  RVRDSLRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKR 227

Query: 878  XXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEG 1057
                                     +VQ+VD+ DP                    +LSEG
Sbjct: 228  DRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEG 287

Query: 1058 IQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLV 1237
            IQD               GG PTF QWA A GVDQ+TLR+RINYGI CKDKMIKSN+RLV
Sbjct: 288  IQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLV 347

Query: 1238 ISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 1417
            ISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 348  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 407

Query: 1418 RTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSL 1597
            RTIRLPFHMVEATYRVKEARKQLYSENGRQP++EEVAEA GLSMKRL AVLLTPKAPRSL
Sbjct: 408  RTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSL 467

Query: 1598 DQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLED 1777
            +QKIGINQNLKPSEIIADPDAET E +L +QFMKQDLDKVL+SLN REKQVIRWRFG++D
Sbjct: 468  EQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDD 527

Query: 1778 GRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            GRMKTLQEIGE+MGVSRERIRQIESCAF            QQY+ S
Sbjct: 528  GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 573


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  506 bits (1302), Expect = e-140
 Identities = 293/572 (51%), Positives = 348/572 (60%), Gaps = 5/572 (0%)
 Frame = +2

Query: 215  MACLVPQFKC-PSSSDAHFRPCLLLHVKPRDHVCLRSHCVLSSM---TAVVDVDKVHIHQ 382
            M+CL+PQFKC P +   HFR    L     +H  L   CVLSS    TAV+D++K+ +  
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRN---LQHHGTNHTQL-PQCVLSSASPSTAVLDLEKLRLPS 56

Query: 383  AEAPHPTSLAASRPLTYLGAVGPPRETDFAASLS-KXXXXXXXXXXXXXXXXXXXXXXXX 559
             E PH  S++A+RP TY+G +GP ++  F  SL+ +                        
Sbjct: 57   LE-PHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVALARAA 115

Query: 560  XXXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSETNPYK 739
                KDAA+M  +   MK E        TD                 I DS ++ET   +
Sbjct: 116  VKVAKDAAEMAKNYSFMKKETKIPIASTTDSFSSMWSLLTEKERADIIGDSVSAETRLRE 175

Query: 740  ENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXXXXXXXX 919
            E +    +++ D    T         Q S  IAVRS RQT                    
Sbjct: 176  EYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSV 235

Query: 920  XXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXXXXXXX 1099
                        +QEVD  DP                    +LSEGIQD           
Sbjct: 236  KSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEEL 295

Query: 1100 XXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQGAGMNL 1279
                GG+P+F QWA A GVDQ TLRKR+NYGI CKDKMIKSN+RLVISIAKNYQG GMNL
Sbjct: 296  KERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNL 355

Query: 1280 QDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 1459
            QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPFHMV+ATY
Sbjct: 356  QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATY 415

Query: 1460 RVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSE 1639
            RVKEARKQLYSENGR PD++EVAEAAGLSMKRL+AVLLTPKAPRSLDQK+G N +LK SE
Sbjct: 416  RVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSE 475

Query: 1640 IIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGEIMG 1819
            + ADP+AETAE +L+K+FMK+DL KVL SL+PRE QV+RWRFG+EDGRMKTLQEIGE+MG
Sbjct: 476  VTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMG 535

Query: 1820 VSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            VSRER+RQIE  AF            +QY+ +
Sbjct: 536  VSRERVRQIELSAFRKLKNKNRTKQLRQYMVA 567


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  497 bits (1279), Expect = e-137
 Identities = 278/533 (52%), Positives = 328/533 (61%), Gaps = 1/533 (0%)
 Frame = +2

Query: 320  SHCVLSSMTAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLS-KXXX 496
            SH   +    ++D+++  +      +  SL  +RP TY GA+GPP E ++ A+L+ +   
Sbjct: 85   SHSTSTPTATLLDMEEFSLPSLTV-NSDSLIVNRPWTYTGAIGPPTEANYGAALATETLL 143

Query: 497  XXXXXXXXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXX 676
                                     KD A +  +N   K+E S      T          
Sbjct: 144  TSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSSPVSCGTSAFHINWAQH 203

Query: 677  XXXXHVGTITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQ 856
                    I DS  SET   +++       ++++    +        Q S  IA RS RQ
Sbjct: 204  LETEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFELLQEQLSNGIAARSSRQ 263

Query: 857  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXX 1036
            T                               ++Q+VD+ DP                  
Sbjct: 264  TERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANE 323

Query: 1037 XXQLSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMI 1216
              +LSEGIQ+               G QPTF QWA A GVDQ+TLRKR+NYGI CKDKMI
Sbjct: 324  EIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKMI 383

Query: 1217 KSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR 1396
            KSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR
Sbjct: 384  KSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVR 443

Query: 1397 KSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLT 1576
            KSLSDQSRTIRLPFHMVEATYRV+EA+KQLYS NGR P++EEVAEA GLSMKRL AVLLT
Sbjct: 444  KSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLT 503

Query: 1577 PKAPRSLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIR 1756
            PKAPRSL+QKIGINQNLKPS++IADPDAETAE +L+K+FMKQDL+KVL+SLNPREKQVIR
Sbjct: 504  PKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDSLNPREKQVIR 563

Query: 1757 WRFGLEDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            WRFG+EDGRMKTLQEIGE+MGVSRERIRQIESCAF            QQY+ S
Sbjct: 564  WRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLS 616


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  491 bits (1263), Expect = e-136
 Identities = 292/590 (49%), Positives = 344/590 (58%), Gaps = 23/590 (3%)
 Frame = +2

Query: 215  MACLVPQFKC-PSSSDAHFRPCLLL-------------HVKPRDHVCLRSHCVLSSMT-- 346
            M+CL+PQFKC P +    F+                  + K RD   LR+ C+LS+ +  
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPP 60

Query: 347  ------AVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXX 508
                    +DVD++ +   +  +  S++  R  +YLGAV         +SL+        
Sbjct: 61   TSTGTATTLDVDRLKLPPFDT-NTDSVSVERLRSYLGAV--------ESSLASTLLTSEE 111

Query: 509  XXXXXXXXXXXXXXXXXXXXXKDAAQMTGH-NLSMKIEKSEDFPFQTDIXXXXXXXXXXX 685
                                 +DAA +  + N S    KS+  P + D            
Sbjct: 112  ASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSP-KPDALHFKWAQFMES 170

Query: 686  XHVGTITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXX 865
                 I +       P + +A    + ++D    TS        + S  I V+S RQT  
Sbjct: 171  ERADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTER 230

Query: 866  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQ 1045
                                         +VQEVDY DP                    +
Sbjct: 231  KARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELE 290

Query: 1046 LSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSN 1225
            LSEGIQD               G +PTF QWA A GV+QRTLRKR+NYG  CKDKMIKSN
Sbjct: 291  LSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSN 350

Query: 1226 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSL 1405
            IRLVISIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRK L
Sbjct: 351  IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFL 410

Query: 1406 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKA 1585
            SDQSRTIRLPFHMVEATYRVKEARKQL  ENGR PD++E+AEAAGLSMKRL AVL+TPKA
Sbjct: 411  SDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKA 470

Query: 1586 PRSLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRF 1765
            PRSL+QKIGINQNLKPSE+I+DP+AET E +LIKQFMKQDL+KVL+SLNPREKQVIRWRF
Sbjct: 471  PRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRF 530

Query: 1766 GLEDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            G+EDGRMKTLQEIGEIMGVSRERIRQIESCAF            QQY+ S
Sbjct: 531  GMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  486 bits (1252), Expect = e-134
 Identities = 279/550 (50%), Positives = 332/550 (60%), Gaps = 6/550 (1%)
 Frame = +2

Query: 284  LHVKPRDHVCLRSHCVLSSM-----TAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVG 448
            L  K  +  C R+ C LSS      TAV++++K+ +   E+ H  S+AA+RP TY+G +G
Sbjct: 7    LAAKNGEPFCFRAQCALSSASPSTSTAVLNLEKLRLPSLES-HSDSIAANRPWTYIGGIG 65

Query: 449  PPRETDFAASLS-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMKIEKS 625
            PP+E  F  SL+ +                            KDAA+M  +  S+  E  
Sbjct: 66   PPKEPLFGTSLATETLIINDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYCSVNTETK 125

Query: 626  EDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSETNPYKENANHNISKDADSFVATSNVNR 805
                   D                 I  S ++ET   +E +    ++++D F  T     
Sbjct: 126  IPIASTADSFSSMWCLLTGKERADIIGVSFSAETGLREECSTQYPTEESDCFGPTHEELA 185

Query: 806  FQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPX 985
              + Q S  I VRS RQT                                VQEVD  DP 
Sbjct: 186  LLEKQLSESIVVRSKRQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPL 245

Query: 986  XXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQR 1165
                               +LSEGIQD               GG+PTF QWA A  VDQ 
Sbjct: 246  RFFRGASTSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQI 305

Query: 1166 TLRKRINYGIQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASK 1345
            TLRKR+NY I CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV+G EKFDASK
Sbjct: 306  TLRKRLNYAILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASK 365

Query: 1346 GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEV 1525
            GFKFSTYAHWWI+QAVR+SLSDQSRTIRLPFHMV+ATYRVKEARKQ YSENGR PD++EV
Sbjct: 366  GFKFSTYAHWWIRQAVRRSLSDQSRTIRLPFHMVDATYRVKEARKQFYSENGRHPDDKEV 425

Query: 1526 AEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQD 1705
            AEA GLSMKRL+AVLLTPKAPRSLDQK+G N +LK SE+ ADP+AETAE +L+K+FMK+D
Sbjct: 426  AEATGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKD 485

Query: 1706 LDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXX 1885
            L++VL SL+PRE QVIRWRFG+EDGRMKTLQEIGE+MGVSRERIRQIE  AF        
Sbjct: 486  LERVLESLSPRENQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNKNR 545

Query: 1886 XXXXQQYITS 1915
                +QY+ S
Sbjct: 546  TKQLRQYLVS 555


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  484 bits (1247), Expect = e-134
 Identities = 283/577 (49%), Positives = 338/577 (58%), Gaps = 11/577 (1%)
 Frame = +2

Query: 218  ACLVPQFKC-PSSSDAHFRPCLLLHVKPRDHVCLRSHCVLSS----MTAVVDVDKVHIHQ 382
            +CL+PQFKC P S   HFR    +  + +  V  +  C +++    +T+ +DV K+ +  
Sbjct: 3    SCLLPQFKCQPDSFSIHFRTSFSVSKQNKGPVFFQPQCAVTTSPALLTSTLDVAKLRLPS 62

Query: 383  AEAPHPTSLAASRPLTYLGAVGPPRETDFAASL-SKXXXXXXXXXXXXXXXXXXXXXXXX 559
             +    + ++  R  TY G VGP  E  +  +L S+                        
Sbjct: 63   FDTDSDSRIS-DRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAA 121

Query: 560  XXXXKDAAQMTGHN-----LSMKIEKSEDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSE 724
                KDA      N     +S   +K   +   T+               G ++D +T+ 
Sbjct: 122  VKVAKDATLFKNSNNTNLLISSTADKRSKWDQFTEKERAGILGHLAVSDTGIVSDKSTAP 181

Query: 725  TNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXXX 904
             +        N    AD       V   ++ Q +  +AVRS RQT               
Sbjct: 182  AS--------NKESSADLISEIQEVELVEE-QPAASLAVRSTRQTERKARRAKGLEKSAS 232

Query: 905  XXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXX 1084
                              QEVD+ DP                    +LS GIQD      
Sbjct: 233  AIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQDLLKLER 292

Query: 1085 XXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQG 1264
                     G QPTF QWA A GVDQ++LRKRINYG QCKDKMIKSNIRLVISIAKNYQG
Sbjct: 293  LQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVISIAKNYQG 352

Query: 1265 AGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 1444
            AGMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHM
Sbjct: 353  AGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHM 412

Query: 1445 VEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQN 1624
            VEATYRVKEARKQLY+E GR P+NEEVAEA GLSMKRL AVLL+PK PRSLDQKIG+NQN
Sbjct: 413  VEATYRVKEARKQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQN 472

Query: 1625 LKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEI 1804
            LKPSE+IADP+AET+E ILIKQFM++DLDKVL+SL  REKQVIRWRFG+EDGRMKTLQEI
Sbjct: 473  LKPSEVIADPEAETSEDILIKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEI 532

Query: 1805 GEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            GE+MGVSRER+RQIES AF            QQY+ +
Sbjct: 533  GELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 569


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  484 bits (1245), Expect = e-134
 Identities = 286/578 (49%), Positives = 339/578 (58%), Gaps = 12/578 (2%)
 Frame = +2

Query: 218  ACLVPQFKC-PSSSDAHFRPCLLLHVKPRDHVCLRSHCVLSS----MTAVVDVDKVHIHQ 382
            +CL+PQFKC P S   HF+    L    +  V  +  C +S+    +T+++DV K+ +  
Sbjct: 3    SCLLPQFKCQPDSFSIHFKTSYSLSKHNKGSVFFQPQCAVSTSPPLLTSMLDVAKLRLPS 62

Query: 383  AEAPHPTSLAASRPLTYLGAVGPPRETDFAASL-SKXXXXXXXXXXXXXXXXXXXXXXXX 559
             +    + ++  R  TY G VGP  E  +  +L S+                        
Sbjct: 63   FDTDSDSRIS-DRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAA 121

Query: 560  XXXXKDAAQM-----TGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSE 724
                KDA        T   +S   +K   +   T+               G ++D +T+ 
Sbjct: 122  VKVAKDATSFRNSYNTKVVVSSAADKRSKWDQFTEKERAGILGHLAVSDTGVVSDKSTAP 181

Query: 725  TN-PYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXX 901
               P    A    ++ +    +        + Q S   AVRS RQT              
Sbjct: 182  APAPAPAPAPDCNNESSGDLKSEKQEVELLEEQLSVSSAVRSTRQTERKARRAKGLEKTA 241

Query: 902  XXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXX 1081
                               QEVD+ DP                    +LSEGIQD     
Sbjct: 242  SSMQSVKTGSSSRKKRAPSQEVDHNDPLRYLRMTTSSSKLLTAREEQELSEGIQDLLKLE 301

Query: 1082 XXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQ 1261
                      G QPTF QWA A GVDQ++LRKRINYG QCKD+MIKSNIRLVISIAKNYQ
Sbjct: 302  RLQAELTERCGHQPTFAQWASAAGVDQKSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQ 361

Query: 1262 GAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 1441
            GAGMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFH
Sbjct: 362  GAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFH 421

Query: 1442 MVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQ 1621
            MVEATYRVKEARKQLYSE G+QP+NEEVAEA GLSMKRL AVLL+PK PRSLDQKIGINQ
Sbjct: 422  MVEATYRVKEARKQLYSETGKQPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQ 481

Query: 1622 NLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQE 1801
            NLKPSE+IADP+AET+E ILIKQFM+QDLDKVL+SL+ REKQVIRWRFG+EDGRMKTLQE
Sbjct: 482  NLKPSEVIADPEAETSEDILIKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQE 541

Query: 1802 IGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            IGE MGVSRER+RQIES AF            QQY+ +
Sbjct: 542  IGETMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 579


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  481 bits (1239), Expect = e-133
 Identities = 284/591 (48%), Positives = 334/591 (56%), Gaps = 50/591 (8%)
 Frame = +2

Query: 293  KPRDHVCLRSHCVLSSMTAVV--------------------------------------- 355
            K RDH+ LR+ C+LS+ +AV                                        
Sbjct: 31   KSRDHIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPSAATT 90

Query: 356  ---DVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXXXXXX 526
               D+ K+ +   EA +P S+A  RP TY GAVGPP E   A +  +             
Sbjct: 91   TVPDIQKLKLPSFEA-NPDSVAPDRPWTYTGAVGPPAE---ANTKPENSLASEEAIVAAA 146

Query: 527  XXXXXXXXXXXXXXXKDAAQMTGHNLSMK--------IEKSEDFPFQTDIXXXXXXXXXX 682
                           +DA  + G+N            + ++   PF++            
Sbjct: 147  AAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVGRGTLSEARTAPFES----VHLAQPGE 202

Query: 683  XXHVGTITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTX 862
               VG   +   SE      +       D+D    +        +Q S  IAV+S RQT 
Sbjct: 203  TRRVGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPEELEILQSQLSNVIAVKSNRQTE 262

Query: 863  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXX 1042
                                          +VQ+VDY DP                    
Sbjct: 263  RKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQ 322

Query: 1043 QLSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKS 1222
            +LS GIQD               GGQPTF QWA A GVDQ TLRKR+NYGI CKDKMIKS
Sbjct: 323  ELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKS 382

Query: 1223 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKS 1402
            N+RLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKS
Sbjct: 383  NVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 442

Query: 1403 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPK 1582
            LSDQSR IRLPFHMVEATYRVKEARKQL +ENGR P++ EVAEAAGLSMKRL AV+LTPK
Sbjct: 443  LSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPK 502

Query: 1583 APRSLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWR 1762
            APRSLDQKIG N++LKPSE++ADP+AET+E IL KQFM+QDL+KVL++LNPREKQV+RWR
Sbjct: 503  APRSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWR 562

Query: 1763 FGLEDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            FGLEDGRMKTLQEIGE+MGVSRERIRQIESCAF            QQYI +
Sbjct: 563  FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYINA 613


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  481 bits (1238), Expect = e-133
 Identities = 275/536 (51%), Positives = 325/536 (60%), Gaps = 9/536 (1%)
 Frame = +2

Query: 335  SSMTAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLSKXXXXXXXXX 514
            ++ T V  + K+ +   EA +P S+A  RP TY GAVGPP E   A +  +         
Sbjct: 87   AATTTVPGIQKLKLPSFEA-NPDSVAPDRPWTYTGAVGPPAE---ANTKPEDSLASEEAI 142

Query: 515  XXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMK---------IEKSEDFPFQTDIXXXXX 667
                               +DA  + G+N ++K         + ++   PF++       
Sbjct: 143  VAAAAAEAVALAKAALKGAQDAVMLVGYN-NLKDSDNVGRGTLSEARTAPFES----VHL 197

Query: 668  XXXXXXXHVGTITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRS 847
                    VG   +   SE      +   +   D+D    +        +Q S  IAV+S
Sbjct: 198  AQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKS 257

Query: 848  GRQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXX 1027
             RQT                               +VQ+VDY DP               
Sbjct: 258  NRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLT 317

Query: 1028 XXXXXQLSEGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKD 1207
                 +LS GIQD               GGQPTF QWA A GVDQ TLRKR+NYGI CKD
Sbjct: 318  ASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKD 377

Query: 1208 KMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQ 1387
            KMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQ
Sbjct: 378  KMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQ 437

Query: 1388 AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAV 1567
            AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR P++ EVAEA GLSMKRL AV
Sbjct: 438  AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAV 497

Query: 1568 LLTPKAPRSLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQ 1747
            +LTPKAPRSLDQK+G N++LKPSE++ADPDAET+E IL KQFM+QDL+KVL++LNPREKQ
Sbjct: 498  MLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQ 557

Query: 1748 VIRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            V+RWRFGLEDGRMKTLQEIGE+MGVSRERIRQIESCAF            QQYI +
Sbjct: 558  VVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYINA 613


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  479 bits (1234), Expect = e-132
 Identities = 282/571 (49%), Positives = 338/571 (59%), Gaps = 4/571 (0%)
 Frame = +2

Query: 215  MACLVPQFKCPSSSDAHFRPCLLLHV-KPRDHVCLRSHCVLS--SMTAVVDVDKVHIHQA 385
            M+CL+P F C   +       L  H+ K R ++C +  CVLS  S + ++ ++K     A
Sbjct: 1    MSCLLPHFNCHLDTFRTHPYALPTHLSKTRPNLCFQPQCVLSATSPSTLLSLEKKLALDA 60

Query: 386  EAPHPTSLAASRPLTYLGAVGPPRETDFAASLS-KXXXXXXXXXXXXXXXXXXXXXXXXX 562
             +   TS        Y+ AV PP + +F ++LS +                         
Sbjct: 61   PSDPNTSWP------YIAAVSPPLQANFKSTLSAESLLTNEEAVIVAAASEALALAKAAA 114

Query: 563  XXXKDAAQMTGHNLSMKIEKSEDFPFQTDIXXXXXXXXXXXXHVGTITDSTTSETNPYKE 742
               KDAA +       + E       ++D               G   +S  +     + 
Sbjct: 115  KVAKDAALLVKKKPPAEAEYKSHVSSKSDDLLLKWFKQMEEVEDGVAEESMGAGAEIMEG 174

Query: 743  NANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXXXXXXXXXXXXXXXXXXX 922
                   +++D   +   + R Q+ Q S  IAVRS RQT                     
Sbjct: 175  VDVSPSEEESDLEPSHEELERLQE-QLSDSIAVRSRRQTERKAKRVRATEKATTNFTSFK 233

Query: 923  XXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXXXXXXXX 1102
                      ++QEVDY DP                    +LS GIQD            
Sbjct: 234  PGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDLLKLEKIQEDLA 293

Query: 1103 XXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQGAGMNLQ 1282
               G QPTF QWA   GVDQ+TLRKR+NYGI CKDKMIKSNIRLVISIAKNYQG+GMNLQ
Sbjct: 294  ERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIAKNYQGSGMNLQ 353

Query: 1283 DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 1462
            DLVQEGCRGLVKGAEKFD +KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR
Sbjct: 354  DLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 413

Query: 1463 VKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEI 1642
            VKEARKQLYSENGRQPD+EEVAEA GLSMKRL AVL+TPKAPRSL+QKIGINQNLKPSE+
Sbjct: 414  VKEARKQLYSENGRQPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQKIGINQNLKPSEV 473

Query: 1643 IADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGEIMGV 1822
            I+DPDAETAE  L+KQFMK+DL++ L+SLNPRE+QV+RWRFG++DGR KTLQEIGE++GV
Sbjct: 474  ISDPDAETAEEQLLKQFMKKDLEEALDSLNPRERQVVRWRFGMDDGRTKTLQEIGEMLGV 533

Query: 1823 SRERIRQIESCAFXXXXXXXXXXXXQQYITS 1915
            SRERIRQIES AF            QQY+ S
Sbjct: 534  SRERIRQIESSAFKKLKNKKRTNHLQQYLVS 564


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  476 bits (1225), Expect = e-131
 Identities = 290/586 (49%), Positives = 344/586 (58%), Gaps = 21/586 (3%)
 Frame = +2

Query: 215  MACLVPQFKCPSSSDAHFRPCLLLH-----------VKPRDHVCLRSHCVLSSM------ 343
            M CL+PQFKC   +   F    +LH           ++ RD VC R  C +S+       
Sbjct: 1    MTCLLPQFKCQPDT---FSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAA 57

Query: 344  --TAVVDVDKVHIHQAEAPHPTSLAASRPLTYLGAVGPPRETDFAASLS-KXXXXXXXXX 514
              T++ DV+K+ +   E+ +  SL+A    T+L  +G P E  F  +L+ K         
Sbjct: 58   AETSIFDVEKLRLPYVES-NSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAV 116

Query: 515  XXXXXXXXXXXXXXXXXXXKDAAQMTGHNLSMK-IEKSEDFPFQTDIXXXXXXXXXXXXH 691
                               KDAA M  ++   K + K E                     
Sbjct: 117  IAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLEGQSLHFS-----GAQLLENEQ 171

Query: 692  VGTITDSTTSETNPYKENANHNISKDADSFVATSNVNRFQDTQHSTRIAVRSGRQTXXXX 871
            VG++ +   SE N  +E     +S+ AD    T    +  + +    I VRS RQ     
Sbjct: 172  VGSMRNFEGSE-NSLREG--DTVSEPAD-MEPTIEELQLLEVELDESITVRSTRQGERKA 227

Query: 872  XXXXXXXXXXXXXXXXXXXXXXXXXXXTVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLS 1051
                                       +VQEVDY DP                    +LS
Sbjct: 228  RRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELS 287

Query: 1052 EGIQDXXXXXXXXXXXXXXNGGQPTFGQWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIR 1231
             GIQD               G  P+F QWA A G+DQRTLR+R+N+G  CKDKMIKSN+R
Sbjct: 288  AGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVR 347

Query: 1232 LVISIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 1411
            LVISIAKNYQG+GMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 348  LVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 407

Query: 1412 QSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPR 1591
            QSRTIRLPFHMVEATYRVKEARKQL SENG+QP+NEEVAEA GLSMKRLTAVL+TPKAPR
Sbjct: 408  QSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPR 467

Query: 1592 SLDQKIGINQNLKPSEIIADPDAETAESILIKQFMKQDLDKVLNSLNPREKQVIRWRFGL 1771
            SLDQKIG N NLKPSE+IADP+AETAE +L KQFM+QDL+KVL++L+ REKQVIRWRFGL
Sbjct: 468  SLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGL 527

Query: 1772 EDGRMKTLQEIGEIMGVSRERIRQIESCAFXXXXXXXXXXXXQQYI 1909
            EDGRMKTLQEIGE+MGVSRERIRQIES AF            QQY+
Sbjct: 528  EDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 573


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  467 bits (1202), Expect = e-129
 Identities = 237/321 (73%), Positives = 261/321 (81%)
 Frame = +2

Query: 953  TVQEVDYYDPXXXXXXXXXXXXXXXXXXXXQLSEGIQDXXXXXXXXXXXXXXNGGQPTFG 1132
            ++Q+VD+ DP                    +LSEGIQ+               GGQPT  
Sbjct: 81   SLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIA 140

Query: 1133 QWAVAVGVDQRTLRKRINYGIQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 1312
            QWA A GVDQ+TLRKRINYGI CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ+GCRGL
Sbjct: 141  QWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGL 200

Query: 1313 VKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 1492
            V+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQLYS
Sbjct: 201  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYS 260

Query: 1493 ENGRQPDNEEVAEAAGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEIIADPDAETAE 1672
             NGR P++EEVAEA GLSMKRL AVLLTPKAPRSL+QKIGINQNLKPSE+IADP+AETAE
Sbjct: 261  VNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAE 320

Query: 1673 SILIKQFMKQDLDKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIES 1852
             +L+K+FMKQDL+KVL+SLN REKQV+RWRFGLEDGRMKTLQEIGE+MGVSRERIRQIES
Sbjct: 321  DMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 380

Query: 1853 CAFXXXXXXXXXXXXQQYITS 1915
            CAF            QQY+ S
Sbjct: 381  CAFRKLKNKKRTKHLQQYVVS 401