BLASTX nr result
ID: Sinomenium22_contig00006397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00006397
(465 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007214226.1| hypothetical protein PRUPE_ppa021308mg [Prun... 116 5e-46
ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi... 115 2e-44
ref|XP_006365973.1| PREDICTED: pentatricopeptide repeat-containi... 115 2e-43
ref|XP_004242217.1| PREDICTED: pentatricopeptide repeat-containi... 115 3e-43
ref|XP_002304609.1| hypothetical protein POPTR_0003s15430g [Popu... 111 3e-41
ref|XP_007040990.1| Tetratricopeptide repeat-like superfamily pr... 110 3e-40
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi... 100 6e-39
gb|EYU43624.1| hypothetical protein MIMGU_mgv1a022008mg [Mimulus... 110 8e-39
ref|XP_006448585.1| hypothetical protein CICLE_v10018364mg [Citr... 100 1e-37
ref|XP_004293856.1| PREDICTED: pentatricopeptide repeat-containi... 99 2e-37
ref|XP_006468590.1| PREDICTED: pentatricopeptide repeat-containi... 99 2e-37
ref|XP_007213915.1| hypothetical protein PRUPE_ppa005675mg [Prun... 98 6e-37
ref|XP_004494495.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-32
ref|XP_003626108.1| Pentatricopeptide repeat-containing protein ... 91 4e-31
ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-22
ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-22
ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfami... 77 8e-22
ref|XP_006385618.1| hypothetical protein POPTR_0003s08690g [Popu... 72 1e-21
ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-21
ref|XP_006451021.1| hypothetical protein CICLE_v10007671mg [Citr... 74 5e-21
>ref|XP_007214226.1| hypothetical protein PRUPE_ppa021308mg [Prunus persica]
gi|462410091|gb|EMJ15425.1| hypothetical protein
PRUPE_ppa021308mg [Prunus persica]
Length = 438
Score = 116 bits (291), Expect(2) = 5e-46
Identities = 58/109 (53%), Positives = 77/109 (70%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
LFDEMP KNT+TWN M+ GYS+SGDVE A LVF+ ++D+AS SAM++AY+ + + E G
Sbjct: 113 LFDEMPEKNTVTWNTMIAGYSRSGDVERARLVFEEMPLRDVASWSAMLTAYVNNGNQECG 172
Query: 185 LTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVFQRRMG 331
L+ FR+MV D KPDQ+ G +LS +G LGLL GKS+ F + G
Sbjct: 173 LSVFRDMVKDGGLKPDQVTAGSVLSGCAHLGHLGLLVGKSVHGFMVKNG 221
Score = 94.0 bits (232), Expect(2) = 5e-46
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KNGWELNVE+GT+L+DMY KCGFLK A RVFE M+ERNV+SW+A+ICG
Sbjct: 214 HGFMVKNGWELNVEIGTVLVDMYAKCGFLKGAARVFELMQERNVMSWTALICG 266
>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 324
Score = 115 bits (289), Expect(2) = 2e-44
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = +2
Query: 17 MP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERGLTFF 196
MP KNT+TWN M+T YSKSGDV+ A LVF+ ++D+AS SAM++ Y+ +W GL F
Sbjct: 1 MPHKNTVTWNTMITAYSKSGDVKKARLVFEQMPLRDLASWSAMVAGYMYGGEWHSGLALF 60
Query: 197 REMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVFQRRMG 331
REMVV+E +PD++ LG +LS MGSLGLL G+SI F + G
Sbjct: 61 REMVVNEGLRPDKVTLGSVLSGCARMGSLGLLVGRSIHGFTAKNG 105
Score = 89.4 bits (220), Expect(2) = 2e-44
Identities = 37/53 (69%), Positives = 47/53 (88%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KNGWEL+V+LGT+L+DMY KCGFLK+A RVF+ M+E+NV SW+A+ICG
Sbjct: 98 HGFTAKNGWELSVDLGTVLVDMYAKCGFLKSAFRVFDLMQEKNVASWTALICG 150
>ref|XP_006365973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 441
Score = 115 bits (289), Expect(2) = 2e-43
Identities = 54/105 (51%), Positives = 77/105 (73%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDE+P +NT+TWN M+T +S+SGDV+ A +FD ++D+AS SAMI+ Y+ + WE
Sbjct: 113 KLFDEIPVRNTVTWNTMITCFSRSGDVKKAREMFDEMPMRDLASWSAMIAGYMNNGHWEE 172
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
G+T FREMV+ E+ KPDQ+ +G IL+ MGS+GL GKS+ F
Sbjct: 173 GVTLFREMVIFEQLKPDQVTIGPILAGCSEMGSIGLFLGKSVHGF 217
Score = 85.9 bits (211), Expect(2) = 2e-43
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WELNVELGT L+DMY KCGFL A VF+ MK+RNVV+W+A+ICG
Sbjct: 215 HGFAVKNNWELNVELGTCLVDMYAKCGFLNFASLVFDMMKDRNVVTWTALICG 267
>ref|XP_004242217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Solanum lycopersicum]
Length = 862
Score = 115 bits (288), Expect(2) = 3e-43
Identities = 54/105 (51%), Positives = 77/105 (73%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDE+P +NT+TWN M+T +S+SGDV+ A +FD ++D+AS SAMI+ Y+ + WE
Sbjct: 113 KLFDEIPVRNTVTWNTMITCFSRSGDVKKAREMFDEMPMRDLASWSAMIAGYMNTGHWEE 172
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
G+ FREMV+ E+ KPDQ+ +G IL+ MGS+GLL GKS+ F
Sbjct: 173 GVALFREMVIFEQLKPDQVTIGPILAGCSEMGSIGLLLGKSVHGF 217
Score = 85.9 bits (211), Expect(2) = 3e-43
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WELNVELGT L+DMY KCGFL A VF+ MK+RNVV+W+A+ICG
Sbjct: 215 HGFAVKNNWELNVELGTCLVDMYAKCGFLNFASLVFDMMKDRNVVTWTALICG 267
>ref|XP_002304609.1| hypothetical protein POPTR_0003s15430g [Populus trichocarpa]
gi|222842041|gb|EEE79588.1| hypothetical protein
POPTR_0003s15430g [Populus trichocarpa]
Length = 431
Score = 111 bits (277), Expect(2) = 3e-41
Identities = 54/109 (49%), Positives = 77/109 (70%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
LFDEMP +N +TWN M+TGYS+SG + A +F++ V+D AS SAMI+ Y+ + ++G
Sbjct: 109 LFDEMPQRNIVTWNTMITGYSRSGSINKARSLFEAMPVRDAASWSAMITCYINNGFRDQG 168
Query: 185 LTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVFQRRMG 331
L+FF+EM+ +E KPDQ+ +G +LS MGSLGLL GKS+ F + G
Sbjct: 169 LSFFQEMMANENPKPDQVTVGSVLSGCAHMGSLGLLAGKSVHGFVVKNG 217
Score = 83.2 bits (204), Expect(2) = 3e-41
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KNGWELNV++GTLL+DMY KCGF K A VF M+ERNV +W+A+ICG
Sbjct: 210 HGFVVKNGWELNVDIGTLLVDMYAKCGFFKNAVWVFVLMQERNVSTWTALICG 262
>ref|XP_007040990.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508704925|gb|EOX96821.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 435
Score = 110 bits (274), Expect(2) = 3e-40
Identities = 52/105 (49%), Positives = 74/105 (70%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDE P +N +TWN M+TGYS+SGD+ A +F++ ++++AS SAMI+A++ +
Sbjct: 109 KLFDETPERNVVTWNTMITGYSRSGDINKAHALFEAMPLRNVASWSAMIAAFMNNGKLNS 168
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
G + FREMV ER+KPDQ+ +GL L MGSLGLL GKS+ F
Sbjct: 169 GFSCFREMVASERYKPDQLTVGLALGGCAHMGSLGLLVGKSVHGF 213
Score = 81.3 bits (199), Expect(2) = 3e-40
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KNGW L+V++GT+L+DMY KCG LK AC VF M++RNV++W+A+ICG
Sbjct: 211 HGFIVKNGWGLDVKIGTILVDMYAKCGLLKLACIVFNLMQQRNVMTWTALICG 263
>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 436
Score = 100 bits (249), Expect(2) = 6e-39
Identities = 50/104 (48%), Positives = 72/104 (69%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
+FDEMP KN++TWN M++GYSK+GDV A +FD +D+AS SAMI+AY+ + ++
Sbjct: 112 VFDEMPHKNSVTWNTMISGYSKAGDVHTARQLFDRMPSRDLASWSAMIAAYINNRNYRGA 171
Query: 185 LTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
L F++M+++ PDQ+ G IL+ MGSLGLL GKS+ F
Sbjct: 172 LLLFQDMIIN-GINPDQMAAGSILNGCAHMGSLGLLAGKSVHGF 214
Score = 86.3 bits (212), Expect(2) = 6e-39
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WELN+ELGT+L+DMY KCGFLK AC++F M ERNV +W+A+ICG
Sbjct: 212 HGFVVKNRWELNLELGTVLVDMYAKCGFLKYACQIFNLMSERNVRTWTALICG 264
>gb|EYU43624.1| hypothetical protein MIMGU_mgv1a022008mg [Mimulus guttatus]
Length = 452
Score = 110 bits (276), Expect(2) = 8e-39
Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 5/109 (4%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
LFDEMP +NT++WN M+TGYS+ GD+ A L FD ++D+AS SAMI+AY+ ++ W+
Sbjct: 115 LFDEMPIRNTVSWNVMITGYSRQGDITTARLFFDRMPLRDLASWSAMIAAYVDNALWDNA 174
Query: 185 LTFFREMVVDER-----FKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
L FREM+V KPDQ+ LG IL G MGS+GL+ GKSI F
Sbjct: 175 LPLFREMMVSRNVTGDCLKPDQLTLGSILGGCGRMGSVGLVFGKSIHAF 223
Score = 75.5 bits (184), Expect(2) = 8e-39
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
H F KN W+LNVELGT L+DMY KCG LK + +F MK NVV+W+A+ICG
Sbjct: 221 HAFVIKNKWDLNVELGTCLVDMYAKCGLLKTSSLIFSMMKGNNVVAWTALICG 273
>ref|XP_006448585.1| hypothetical protein CICLE_v10018364mg [Citrus clementina]
gi|557551196|gb|ESR61825.1| hypothetical protein
CICLE_v10018364mg [Citrus clementina]
Length = 454
Score = 100 bits (248), Expect(2) = 1e-37
Identities = 48/101 (47%), Positives = 72/101 (71%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDE+P +N +TWN ++ GYSKSG+V A VF+ ++++AS SAMI+AYL + D++
Sbjct: 110 KLFDELPERNAVTWNTLIKGYSKSGNVCEARDVFERMPLRNVASWSAMIAAYLNAGDYDP 169
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKS 304
GL FREM+ + PD++ +G +LS +GS+GLL GKS
Sbjct: 170 GLKLFREMISNVGLSPDRMTIGAVLSGCSHLGSVGLLMGKS 210
Score = 82.4 bits (202), Expect(2) = 1e-37
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WELN ++ T+L+DMY KCGFLK A VFE M+ERNV+SW+A+ICG
Sbjct: 212 HGFIVKNEWELNEQIATILVDMYAKCGFLKYALMVFELMEERNVISWTALICG 264
>ref|XP_004293856.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Fragaria vesca subsp. vesca]
Length = 389
Score = 98.6 bits (244), Expect(2) = 2e-37
Identities = 50/106 (47%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
QLFDEMP K+T+TWN M++GYS+ G+VE A LVF+ ++D++S +AMI+AY+ + E
Sbjct: 65 QLFDEMPEKSTVTWNTMISGYSRKGNVERARLVFEEMPLRDVSSWNAMIAAYVNNRKHEL 124
Query: 182 GLTFFREMVV-DERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
GL+ FR+MV+ +E + Q+ ++LS +GS+GLL GKS+ F
Sbjct: 125 GLSLFRDMVMGEEGVRLGQVTAVVVLSGCAHLGSVGLLVGKSVHGF 170
Score = 83.6 bits (205), Expect(2) = 2e-37
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WE+N ELGT+LIDMY KCGF+K A +VFE M+E+NV++W+A+ICG
Sbjct: 168 HGFVVKNRWEMNAELGTVLIDMYAKCGFMKGAEQVFELMQEKNVMAWTALICG 220
>ref|XP_006468590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 454
Score = 99.4 bits (246), Expect(2) = 2e-37
Identities = 49/101 (48%), Positives = 71/101 (70%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDE+P +N +TWN M+ GYSKSG+V A F+ ++++AS SAMI+AYL + ++
Sbjct: 110 KLFDELPERNAVTWNTMIKGYSKSGNVCEALDFFERMPLRNVASWSAMIAAYLNAGAYDP 169
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKS 304
GL FREM+ +E PDQ+ +G +LS +GS+GLL GKS
Sbjct: 170 GLKLFREMISNEGLTPDQMTIGAVLSGCSHLGSVGLLMGKS 210
Score = 82.4 bits (202), Expect(2) = 2e-37
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WELN ++ T+L+DMY KCGFLK A VFE M+ERNV+SW+A+ICG
Sbjct: 212 HGFIVKNEWELNEQIATILVDMYAKCGFLKYALMVFELMEERNVISWTALICG 264
>ref|XP_007213915.1| hypothetical protein PRUPE_ppa005675mg [Prunus persica]
gi|462409780|gb|EMJ15114.1| hypothetical protein
PRUPE_ppa005675mg [Prunus persica]
Length = 448
Score = 97.8 bits (242), Expect(2) = 6e-37
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
LFDEMP KNT+TWN M++GY +SGDV+ A LVF+ ++DIAS SAMIS Y+ + + +
Sbjct: 114 LFDEMPDKNTVTWNIMISGYLRSGDVKRARLVFEEMPLRDIASFSAMISGYVQNGNHKHA 173
Query: 185 LTFFREMVVDER--FKPDQIILGLILSKRGTMGSLGLLGGKSIMVF 316
L FR MV++E +PD I +LS MG+ GLL GKS+ F
Sbjct: 174 LLLFRSMVMNENEGIRPDGGIAVSVLSSCARMGTHGLLLGKSVHGF 219
Score = 82.4 bits (202), Expect(2) = 6e-37
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HGF KN WELNVELGT L+DMY KC LK A RVFE M+ER+V SW+A+ICG
Sbjct: 217 HGFMVKNHWELNVELGTTLVDMYAKCRSLKGAARVFELMQERSVTSWTALICG 269
>ref|XP_004494495.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cicer arietinum]
Length = 432
Score = 92.0 bits (227), Expect(2) = 6e-32
Identities = 46/101 (45%), Positives = 62/101 (61%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
LFDE+P KN +TWN M+ GYS+ GDV A +F+ +D S S+MISAY + +
Sbjct: 105 LFDELPQKNIVTWNTMILGYSRFGDVNRARELFEEMPHRDSVSWSSMISAYTNVGSYIQS 164
Query: 185 LTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSI 307
L+ FR M++ E KPDQ+ G +LS MG GL GKS+
Sbjct: 165 LSLFRRMLLVEGTKPDQVTAGAVLSGCAHMGCFGLFAGKSV 205
Score = 71.2 bits (173), Expect(2) = 6e-32
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HG+ KNGWELNVE+G L++MY K G L+ A VFE M ER+V+SW+ +ICG
Sbjct: 206 HGYIVKNGWELNVEIGAALVNMYAKGGVLRNAATVFELMDERDVMSWTLMICG 258
>ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat
[Medicago truncatula] gi|355501123|gb|AES82326.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 417
Score = 90.5 bits (223), Expect(2) = 4e-31
Identities = 48/101 (47%), Positives = 63/101 (62%)
Frame = +2
Query: 5 LFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERG 184
LFDEMP ++T+TWN M+ GYS+ DV+ A +FD +DI S MISAYL + +
Sbjct: 90 LFDEMPQRDTVTWNTMILGYSRLEDVKKARQLFDEMPHRDIVSWCNMISAYLNVGSYMQS 149
Query: 185 LTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSI 307
L FR M+ E KPDQ+I L+LS + GLLGGKS+
Sbjct: 150 LYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHGLLGGKSV 190
Score = 70.1 bits (170), Expect(2) = 4e-31
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 286 VVGWEVYHGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
++G + HG+ KNGWELNVE+G L++MY K G L+ A V E M ER+V SW+ +ICG
Sbjct: 184 LLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICG 243
>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum tuberosum]
Length = 509
Score = 74.7 bits (182), Expect(2) = 2e-22
Identities = 36/94 (38%), Positives = 59/94 (62%)
Frame = +2
Query: 8 FDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERGL 187
FD M KN +TWN MV GY ++GD + A VFD + +D+ S +A++ ++ + +E GL
Sbjct: 142 FDHMGVKNKVTWNTMVDGYMRNGDFKNAVKVFDEITERDVISWTALVGGFVKNGLFEEGL 201
Query: 188 TFFREMVVDERFKPDQIILGLILSKRGTMGSLGL 289
+FREM + E +PD + + +LS +G+LG+
Sbjct: 202 VWFREMQLSE-VEPDYVTMISVLSACANLGTLGI 234
Score = 57.0 bits (136), Expect(2) = 2e-22
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
H F + ++ NV + LIDMY +CG ++ AC+VF+RM ER++VSW++II G
Sbjct: 239 HRFILRREFKDNVRVNNSLIDMYCRCGCIELACQVFDRMTERSLVSWNSIIVG 291
>ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 68.9 bits (167), Expect(2) = 6e-22
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
Q+FDEMP ++ ++WN MV+GY GD+E A VFD +D+ S +AMI Y+ + +
Sbjct: 169 QVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSD 228
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSL 283
+ F EM PD + L +LS +G+L
Sbjct: 229 AIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGAL 262
Score = 60.8 bits (146), Expect(2) = 6e-22
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = +1
Query: 328 GWE---LNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
GW LN+ LG LIDMY KCG ++ A R+F+ M+ER+V+SWS +ICG
Sbjct: 273 GWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICG 321
>ref|XP_007050341.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
cacao] gi|508702602|gb|EOX94498.1| Basic
helix-loop-helix DNA-binding superfamily protein
[Theobroma cacao]
Length = 600
Score = 77.4 bits (189), Expect(2) = 8e-22
Identities = 41/102 (40%), Positives = 60/102 (58%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDEMP +NT TWN M+ GY++ GDVE A L F+ VKDI S ++MI+ Y + +
Sbjct: 233 RLFDEMPERNTATWNAMIDGYARVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFRE 292
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSLGLLGGKSI 307
L F EM + PD++ + ++S +G+L GK I
Sbjct: 293 ALAVFEEM-RRNKVSPDEVTMASVISACAHLGALNT--GKEI 331
Score = 52.0 bits (123), Expect(2) = 8e-22
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +1
Query: 292 GWEVYHGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
G E++H + +NG+ L+V +G+ L+DMY KCG L+ + F +++E+N+ W+++I G
Sbjct: 328 GKEIHH-YVMQNGFYLDVYIGSALVDMYAKCGSLERSLLAFFKLREKNLFCWNSVIEG 384
>ref|XP_006385618.1| hypothetical protein POPTR_0003s08690g [Populus trichocarpa]
gi|550342748|gb|ERP63415.1| hypothetical protein
POPTR_0003s08690g [Populus trichocarpa]
Length = 609
Score = 72.4 bits (176), Expect(2) = 1e-21
Identities = 35/94 (37%), Positives = 60/94 (63%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
++FDEMP KN I W MV+GY G+++ A +F+ + VKD+ +AMI+ Y+ + ++
Sbjct: 245 KIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDE 304
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSL 283
+ F+EM + +R KPD+ +L +L+ MG+L
Sbjct: 305 AVALFQEMQI-QRVKPDKFVLVALLTGCAQMGAL 337
Score = 56.2 bits (134), Expect(2) = 1e-21
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +1
Query: 280 TWVVGWEVYHGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAII 459
TW+ HG+ ++ G ++ +GT LI+MY+KCG ++ A R+F ++E++ +W++II
Sbjct: 341 TWI------HGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSII 394
Query: 460 CG 465
CG
Sbjct: 395 CG 396
Score = 47.4 bits (111), Expect(2) = 6e-08
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 334 ELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
EL +G+ L+DMY KCG L A ++F+ M +NV+ W++++ G
Sbjct: 221 ELTSIIGSALLDMYCKCGCLSVARKIFDEMPHKNVICWTSMVSG 264
Score = 35.0 bits (79), Expect(2) = 6e-08
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +2
Query: 29 NTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWERGLTFFREMV 208
+T N ++ Y+K G V+ +FD +D+ S + +IS Y+ +E + F M
Sbjct: 122 DTYVCNPLIDMYAKLGQVDVMRKLFDEMPERDVVSWNVLISGYVKRRRFEDAIDVFCCMR 181
Query: 209 VDERFKPDQIILGLILSKRGTMGSLGLLGGKSIMVFQR 322
+ +P++ + LS + L L GK I + R
Sbjct: 182 EESYLRPNEPTVVSTLSACAALKCLEL--GKEIHCYVR 217
>ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Citrus sinensis]
Length = 663
Score = 73.6 bits (179), Expect(2) = 5e-21
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDEMP KN I W MV+GY G +E A +FD + V+DI +AMI+ Y+ + ++
Sbjct: 289 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 348
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSL 283
+ FREM + R KPD+ IL +L+ +G+L
Sbjct: 349 AVALFREMQI-IRLKPDKFILVALLTGCAQLGAL 381
Score = 53.1 bits (126), Expect(2) = 5e-21
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HG+ +N ++ + T LI+MY KCG ++ A +F ++E++ SW++IICG
Sbjct: 388 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 440
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 349 LGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
+G L+DMY KCG L A +F+ M +NV+ W++++ G
Sbjct: 270 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 308
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVF-----DSTSVKDIASLSAMISAYLGS 166
+LFDEMP K+ ++WN ++G+ K E A VF + D ++ + +SA
Sbjct: 188 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 247
Query: 167 SDWERGLTFFREMVVDERFKP 229
+ E G R + + F P
Sbjct: 248 KNLELGKEIHRYINQELEFTP 268
>ref|XP_006451021.1| hypothetical protein CICLE_v10007671mg [Citrus clementina]
gi|557554247|gb|ESR64261.1| hypothetical protein
CICLE_v10007671mg [Citrus clementina]
Length = 663
Score = 73.6 bits (179), Expect(2) = 5e-21
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVFDSTSVKDIASLSAMISAYLGSSDWER 181
+LFDEMP KN I W MV+GY G +E A +FD + V+DI +AMI+ Y+ + ++
Sbjct: 289 ELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDE 348
Query: 182 GLTFFREMVVDERFKPDQIILGLILSKRGTMGSL 283
+ FREM + R KPD+ IL +L+ +G+L
Sbjct: 349 AVALFREMQI-IRLKPDKFILVALLTGCAQLGAL 381
Score = 53.1 bits (126), Expect(2) = 5e-21
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 307 HGFPEKNGWELNVELGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
HG+ +N ++ + T LI+MY KCG ++ A +F ++E++ SW++IICG
Sbjct: 388 HGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDAASWTSIICG 440
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 349 LGTLLIDMYTKCGFLKAACRVFERMKERNVVSWSAIICG 465
+G L+DMY KCG L A +F+ M +NV+ W++++ G
Sbjct: 270 MGNALLDMYCKCGCLSEARELFDEMPNKNVICWTSMVSG 308
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 2 QLFDEMP*KNTITWNKMVTGYSKSGDVEGAGLVF-----DSTSVKDIASLSAMISAYLGS 166
+LFDEMP K+ ++WN ++G+ K E A VF + D ++ + +SA
Sbjct: 188 KLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVSTLSACTAL 247
Query: 167 SDWERGLTFFREMVVDERFKP 229
+ E G R + + F P
Sbjct: 248 KNLELGKEIHRYINQELEFTP 268