BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00006276
         (755 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007028731.1| 3'-5'-exoribonuclease family protein [Theobr...   266   8e-69
ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-l...   265   1e-68
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   265   1e-68
ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citr...   260   3e-67
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu...   258   2e-66
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              256   6e-66
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...   254   2e-65
ref|XP_007133470.1| hypothetical protein PHAVU_011G181200g [Phas...   253   5e-65
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   251   3e-64
gb|EYU20751.1| hypothetical protein MIMGU_mgv1a010701mg [Mimulus...   249   6e-64
ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu...   249   6e-64
ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-l...   249   6e-64
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil...   249   6e-64
ref|NP_176216.1| 3'-5'-exoribonuclease family protein [Arabidops...   249   1e-63
ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-l...   248   2e-63
ref|XP_002886636.1| predicted protein [Arabidopsis lyrata subsp....   246   5e-63
ref|XP_006365748.1| PREDICTED: exosome complex component RRP43 i...   246   8e-63
ref|NP_001275445.1| 3'-5'-exoribonuclease/RNA binding-like prote...   246   8e-63
ref|XP_004498461.1| PREDICTED: exosome complex component RRP43-l...   245   1e-62
ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [...   245   1e-62

>ref|XP_007028731.1| 3'-5'-exoribonuclease family protein [Theobroma cacao]
           gi|508717336|gb|EOY09233.1| 3'-5'-exoribonuclease family
           protein [Theobroma cacao]
          Length = 302

 Score =  266 bits (679), Expect = 8e-69
 Identities = 136/203 (66%), Positives = 157/203 (77%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           E+EVDAFRRLFPLRFYE+HL ES+RPD+RPLG+ARDTT+ALGAV+SA+GSALAKIG TTM
Sbjct: 13  EVEVDAFRRLFPLRFYEKHLSESIRPDARPLGRARDTTIALGAVASANGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM PS  +PDEGCVAIDF+MPPICSP VRPG+ ++ APV+SKQLSD ILSSGM
Sbjct: 73  LAAIKMEVMTPSTETPDEGCVAIDFHMPPICSPIVRPGRPAEAAPVVSKQLSDTILSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKEL L++GKAAWM YLD+YCLDADG                L IP            
Sbjct: 133 ISLKELCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLEIPVVSLNDDGKIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           +  E  EG S REP+N+EKRKLT
Sbjct: 193 L-SEEQEGMSEREPVNKEKRKLT 214


>ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Citrus
           sinensis] gi|568873742|ref|XP_006489987.1| PREDICTED:
           exosome complex component RRP43-like isoform X2 [Citrus
           sinensis]
          Length = 302

 Score =  265 bits (678), Expect = 1e-68
 Identities = 135/203 (66%), Positives = 158/203 (77%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD+RPL +ARDTT+++GAV+SADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYFERHLAESIRPDARPLSRARDTTISMGAVASADGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM PSL SPDEGCV+IDF+MPPICSP VRPG+ ++ APV++KQLSD I SSGM
Sbjct: 73  LAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           INLKELSL+ GKAAWMVYLD+YCLDADG                L+IP            
Sbjct: 133 INLKELSLVGGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSNLQIPT-VSLDDGKIVM 191

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           +P E  E  S +EP+N+EKRKLT
Sbjct: 192 LPEEQKEENSEKEPVNKEKRKLT 214


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  265 bits (678), Expect = 1e-68
 Identities = 136/205 (66%), Positives = 159/205 (77%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ER LL+S+RPD+RPLG+ARDT++ALGAV+SADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAKIGCTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAA+KMEVM P   SPDEG +AI+FYMPPICSP VRPG+ ++ APV+SKQLSD ILSSGM
Sbjct: 73  LAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSKQLSDTILSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           INLKELSL++GKAAWM YLD+YCLDADG                LRIP            
Sbjct: 133 INLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSLNEEGRVVV 192

Query: 76  VPGEHVEGKSVREPINREKRKLTFS 2
           V  E+ EGKS +EP+N+ KRKLT S
Sbjct: 193 VSEENEEGKSEKEPVNKGKRKLTLS 217


>ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citrus clementina]
           gi|567857414|ref|XP_006421390.1| hypothetical protein
           CICLE_v10005512mg [Citrus clementina]
           gi|557523262|gb|ESR34629.1| hypothetical protein
           CICLE_v10005512mg [Citrus clementina]
           gi|557523263|gb|ESR34630.1| hypothetical protein
           CICLE_v10005512mg [Citrus clementina]
          Length = 302

 Score =  260 bits (665), Expect = 3e-67
 Identities = 133/203 (65%), Positives = 157/203 (77%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD+R L +AR+TT+++GAV+SADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYFERHLAESIRPDARSLSRARNTTISMGAVASADGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM PSL SPDEGCV+IDF+MPPICSP VRPG+ ++ APV++KQLSD I SSGM
Sbjct: 73  LAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           INLKELSL+ GKAAWMVYLD+YCLDADG                L+IP            
Sbjct: 133 INLKELSLVGGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSNLQIPT-VSLDDGKIVM 191

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           +P E  E  S +EP+N+EKRKLT
Sbjct: 192 LPEEQKEENSEKEPVNKEKRKLT 214


>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
           gi|550335486|gb|ERP58806.1| hypothetical protein
           POPTR_0006s04970g [Populus trichocarpa]
          Length = 303

 Score =  258 bits (659), Expect = 2e-66
 Identities = 135/205 (65%), Positives = 154/205 (75%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD+RPLG+ARDTT+ALGAV+SA GSALAKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM PS  SP+EG +AIDF+MPPICSP VRPG+ ++ APVISKQLSD I SSGM
Sbjct: 73  LAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           INLKELSL++GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 133 INLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVGAFSHLQIPIVSLNDDGKIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKLTFS 2
           V  E    K   EP+N+EKRKLT S
Sbjct: 193 VSEEDDGTKLEEEPVNKEKRKLTLS 217


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  256 bits (654), Expect = 6e-66
 Identities = 135/213 (63%), Positives = 158/213 (74%), Gaps = 8/213 (3%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ER LL+S+RPD+RPLG+ARDT++ALGAV+SADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAKIGCTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILS--- 266
           LAA+KMEVM P   SPDEG +AI+FYMPPICSP VRPG+ ++ APV+SKQLSD IL    
Sbjct: 73  LAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSKQLSDTILRHVN 132

Query: 265 -----SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXX 101
                SGMINLKELSL++GKAAWM YLD+YCLDADG                LRIP    
Sbjct: 133 VVTSFSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSL 192

Query: 100 XXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
                   V  E+ EGKS +EP+N+ KRKLT S
Sbjct: 193 NEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLS 225


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score =  254 bits (650), Expect = 2e-65
 Identities = 130/203 (64%), Positives = 152/203 (74%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EME DAFRRLFPL F+ERHL ES+RPD R LG+ARDTT+ALGAV SADGSA+AKIG TTM
Sbjct: 13  EMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSADGSAIAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           +AAIKMEVM PS  SPDEGC+AIDF+MPPICSP VRPG+ ++ APV+SKQLSD I+SS M
Sbjct: 73  MAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVSKQLSDTIMSSAM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKELSL++GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 133 IDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALFSAVAAFTNLQIPIVSLNDDGKVVV 192

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           V  E+  GK  +E +N+EKRKLT
Sbjct: 193 VSDENEGGKREKEAVNKEKRKLT 215


>ref|XP_007133470.1| hypothetical protein PHAVU_011G181200g [Phaseolus vulgaris]
           gi|561006470|gb|ESW05464.1| hypothetical protein
           PHAVU_011G181200g [Phaseolus vulgaris]
          Length = 301

 Score =  253 bits (646), Expect = 5e-65
 Identities = 129/203 (63%), Positives = 155/203 (76%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD RPLGKAR+T++ LGAVS+A GSAL KIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVSTAHGSALVKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAA+KMEVM+PSL SPDEGC+A+DF+MPPICSP VRPG+ ++ +PV+SKQLSD I SS M
Sbjct: 73  LAAVKMEVMSPSLESPDEGCLAVDFFMPPICSPIVRPGRPAEASPVVSKQLSDTISSSKM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKELSL++GKAAWM YLD+YCLDADG                L+IPA           
Sbjct: 133 IDLKELSLVSGKAAWMTYLDIYCLDADGSLYDAALLSAVAALSHLQIPAVAMNDDGKIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           V  E  + K  +EP+N+EKRKLT
Sbjct: 193 VSDEDGQ-KRAQEPVNKEKRKLT 214


>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
           gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
           complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  251 bits (640), Expect = 3e-64
 Identities = 128/202 (63%), Positives = 150/202 (74%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           +MEVDAFRRLFP++FYERHL ES+RPD R LGKARDTT+ALG VSSA+GSALAKIG TTM
Sbjct: 14  QMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTM 73

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM PS+ SPDEGC+A+DF+MPP+CSP VRPG+ ++ APVISKQLSD I SSGM
Sbjct: 74  LAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVISKQLSDTISSSGM 133

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+L+ELSL+ GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 134 IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVF 193

Query: 76  VPGEHVEGKSVREPINREKRKL 11
           V  E       +EP+N+E RKL
Sbjct: 194 VCEEEGGENFEKEPVNKENRKL 215


>gb|EYU20751.1| hypothetical protein MIMGU_mgv1a010701mg [Mimulus guttatus]
           gi|604301032|gb|EYU20752.1| hypothetical protein
           MIMGU_mgv1a010701mg [Mimulus guttatus]
          Length = 304

 Score =  249 bits (637), Expect = 6e-64
 Identities = 129/203 (63%), Positives = 154/203 (75%), Gaps = 1/203 (0%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLRF+ERHLLES+RPD RPLG+ARDTT+ LGAV+SA+GSA+AKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRFHERHLLESLRPDGRPLGRARDTTLMLGAVASANGSAMAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM P+  +PDEGC+AI+F+MPPICSP VRPG+ ++VAPVISKQLSD ILSSGM
Sbjct: 73  LAAIKMEVMTPTAEAPDEGCIAIEFHMPPICSPLVRPGRPAEVAPVISKQLSDTILSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKEL L+ GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 133 IDLKELCLVGGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIPVVSLNDDGRIVI 192

Query: 76  VPGEHVEG-KSVREPINREKRKL 11
           +  ++  G    +EP+N+EK KL
Sbjct: 193 ISEDNNGGAMKEKEPVNKEKIKL 215


>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
           gi|550320907|gb|ERP51579.1| hypothetical protein
           POPTR_0016s05590g [Populus trichocarpa]
          Length = 323

 Score =  249 bits (637), Expect = 6e-64
 Identities = 135/225 (60%), Positives = 154/225 (68%), Gaps = 20/225 (8%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFR LFPLR++ERHL ES+RPD+RPLG+ARDTT+ALGAV+SA GSALAKIG TTM
Sbjct: 13  EMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILS--- 266
           LAAIKMEVM PS  SPDEGC+AIDF+MPPICSP VRPG+ ++ APVISKQLSD I     
Sbjct: 73  LAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISRQVK 132

Query: 265 -----------------SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXX 137
                            SGMINLKELSL++GKAAWM YLD+YCLDADG            
Sbjct: 133 FSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVA 192

Query: 136 XXXXLRIPAXXXXXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
               L+IP            V  E    K  +EP+N+EKRKLT S
Sbjct: 193 AFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLS 237


>ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Glycine
           max] gi|571509874|ref|XP_006596185.1| PREDICTED: exosome
           complex component RRP43-like isoform X4 [Glycine max]
          Length = 299

 Score =  249 bits (637), Expect = 6e-64
 Identities = 128/203 (63%), Positives = 152/203 (74%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD RPLGKAR+T++ LGAV+SA+GSAL KIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSALVKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           L AIKMEVM PSL SPDEGC+AIDF+MPPICSP VRPG+ ++ +PV+SKQLSD I SS M
Sbjct: 73  LTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLSDTISSSRM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKELSL+ GKAAWM YLD+YCLDADG                L+IPA           
Sbjct: 133 IDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIPAVAMNDDGKIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
                V G+  ++P+N+EKRKLT
Sbjct: 193 -----VSGEDGQKPVNKEKRKLT 210


>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
           trichocarpa] gi|222867347|gb|EEF04478.1| 3'
           exoribonuclease domain 1-containing family protein
           [Populus trichocarpa]
          Length = 439

 Score =  249 bits (637), Expect = 6e-64
 Identities = 135/225 (60%), Positives = 154/225 (68%), Gaps = 20/225 (8%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFR LFPLR++ERHL ES+RPD+RPLG+ARDTT+ALGAV+SA GSALAKIG TTM
Sbjct: 13  EMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILS--- 266
           LAAIKMEVM PS  SPDEGC+AIDF+MPPICSP VRPG+ ++ APVISKQLSD I     
Sbjct: 73  LAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISRQVK 132

Query: 265 -----------------SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXX 137
                            SGMINLKELSL++GKAAWM YLD+YCLDADG            
Sbjct: 133 FSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVA 192

Query: 136 XXXXLRIPAXXXXXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
               L+IP            V  E    K  +EP+N+EKRKLT S
Sbjct: 193 AFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLS 237


>ref|NP_176216.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
           gi|4249388|gb|AAD14485.1| Similar to gb|AF025438
           Opa-interacting protein (OIP2) from Homo sapiens
           [Arabidopsis thaliana] gi|28416659|gb|AAO42860.1|
           At1g60080 [Arabidopsis thaliana]
           gi|110735926|dbj|BAE99938.1| hypothetical protein
           [Arabidopsis thaliana] gi|332195536|gb|AEE33657.1|
           3'-5'-exoribonuclease family protein [Arabidopsis
           thaliana]
          Length = 302

 Score =  249 bits (635), Expect = 1e-63
 Identities = 130/206 (63%), Positives = 154/206 (74%), Gaps = 3/206 (1%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRR+FPLRF+ERHL ES+RPD R LGKARDT V LG VS+ADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAI+MEVM PS  SPDEGC+AI+F+MPPICSP+VRPG+ ++ APVISK+LSD ILSSGM
Sbjct: 73  LAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKEL L++GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 133 IDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIVALNDNGRIVA 192

Query: 76  VPGEHVEGKSV---REPINREKRKLT 8
           V GE  +  ++   +E +N+EKRKLT
Sbjct: 193 VTGEKDQDNALITEKEAVNKEKRKLT 218


>ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
          Length = 302

 Score =  248 bits (633), Expect = 2e-63
 Identities = 128/203 (63%), Positives = 153/203 (75%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD RPLGKAR+T++ LGAV+SA+GSAL KIG TT+
Sbjct: 13  EMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSALVKIGSTTI 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           L AIKMEVM PSL SPDEGC+AIDF+MPPICSP VRPG+ ++ +PV+SKQLSD I SS M
Sbjct: 73  LTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLSDTISSSKM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKELSL++GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 133 IDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVASLSHLQIPVVAMNDDGKIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           V  E  + K  +EP+N+EKRKLT
Sbjct: 193 VSEEDGQ-KREQEPVNKEKRKLT 214


>ref|XP_002886636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332477|gb|EFH62895.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 302

 Score =  246 bits (629), Expect = 5e-63
 Identities = 129/206 (62%), Positives = 154/206 (74%), Gaps = 3/206 (1%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRR+FPLRF+ERHL ES+RPD R LGKARDT V LG VS+ADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAI+MEVM PS  SPDEGC+A++F+MPPICSP+VRPG+ +D APVISK+LSD ILSSGM
Sbjct: 73  LAAIRMEVMTPSTDSPDEGCIALEFHMPPICSPTVRPGRPADAAPVISKRLSDTILSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKEL L++GKAAWM YLD+YCLDADG                L+IP            
Sbjct: 133 IDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLSAVAAFSNLQIPVVALNDNGRIVA 192

Query: 76  VP-GEHVEGKSV--REPINREKRKLT 8
           +  G+  +  S+  +E +N+EKRKLT
Sbjct: 193 ITGGKDQDNASITEKEAVNKEKRKLT 218


>ref|XP_006365748.1| PREDICTED: exosome complex component RRP43 isoform X3 [Solanum
           tuberosum]
          Length = 302

 Score =  246 bits (627), Expect = 8e-63
 Identities = 126/205 (61%), Positives = 154/205 (75%)
 Frame = -2

Query: 625 IVGEMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGH 446
           +  EMEVDAFRRLFPLR++E+HLL+SVRPD+R LG ARDTT+ALGAV+SA+GSALAKIG 
Sbjct: 10  LYSEMEVDAFRRLFPLRYHEQHLLKSVRPDARKLGSARDTTLALGAVASAEGSALAKIGS 69

Query: 445 TTMLAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILS 266
           TTMLAAIKME+M P++  PDEG +AI+F+MPPICSP VRPG+ ++VA VISKQLSD ILS
Sbjct: 70  TTMLAAIKMEIMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEVASVISKQLSDTILS 129

Query: 265 SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXX 86
           SGMI+LKEL L+ GKAAWM YLD+YCLDADG                L IP         
Sbjct: 130 SGMIDLKELCLVGGKAAWMAYLDIYCLDADGSLFDAALLSTVAAFSHLNIPVVSLNEDGR 189

Query: 85  XXXVPGEHVEGKSVREPINREKRKL 11
              V  ++++ K  ++P+N EKRKL
Sbjct: 190 IVLVSEDNIQLKLEKQPVNTEKRKL 214


>ref|NP_001275445.1| 3'-5'-exoribonuclease/RNA binding-like protein [Solanum tuberosum]
           gi|565400462|ref|XP_006365747.1| PREDICTED: exosome
           complex component RRP43 isoform X2 [Solanum tuberosum]
           gi|83283987|gb|ABC01901.1| 3'-5'-exoribonuclease/RNA
           binding-like protein [Solanum tuberosum]
          Length = 303

 Score =  246 bits (627), Expect = 8e-63
 Identities = 126/205 (61%), Positives = 154/205 (75%)
 Frame = -2

Query: 625 IVGEMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGH 446
           +  EMEVDAFRRLFPLR++E+HLL+SVRPD+R LG ARDTT+ALGAV+SA+GSALAKIG 
Sbjct: 10  LYSEMEVDAFRRLFPLRYHEQHLLKSVRPDARKLGSARDTTLALGAVASAEGSALAKIGS 69

Query: 445 TTMLAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILS 266
           TTMLAAIKME+M P++  PDEG +AI+F+MPPICSP VRPG+ ++VA VISKQLSD ILS
Sbjct: 70  TTMLAAIKMEIMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEVASVISKQLSDTILS 129

Query: 265 SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXX 86
           SGMI+LKEL L+ GKAAWM YLD+YCLDADG                L IP         
Sbjct: 130 SGMIDLKELCLVGGKAAWMAYLDIYCLDADGSLFDAALLSTVAAFSHLNIPVVSLNEDGR 189

Query: 85  XXXVPGEHVEGKSVREPINREKRKL 11
              V  ++++ K  ++P+N EKRKL
Sbjct: 190 IVLVSEDNIQLKLEKQPVNTEKRKL 214


>ref|XP_004498461.1| PREDICTED: exosome complex component RRP43-like [Cicer arietinum]
          Length = 302

 Score =  245 bits (626), Expect = 1e-62
 Identities = 125/203 (61%), Positives = 149/203 (73%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLR++ERHL ES+RPD RPLGKARDT++ LGAV+SA+GSAL KIG TTM
Sbjct: 13  EMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARDTSIFLGAVASANGSALVKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           L AIKME+M PSL SPDEGC+AIDF+MPPICSP VRPG+ ++  PV+SKQLSD I SSGM
Sbjct: 73  LTAIKMEIMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEAEPVVSKQLSDTISSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKELSL++GKAAWM YLDVYCLDADG                 +              
Sbjct: 133 IDLKELSLVSGKAAWMAYLDVYCLDADGALFDAALLSAVAALSHCKXXXVAMNDDGKIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKLT 8
           +  E  + K  +E +N+EK+KLT
Sbjct: 193 MSDEDGQ-KQSKEQVNKEKKKLT 214


>ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [Solanum tuberosum]
          Length = 303

 Score =  245 bits (625), Expect = 1e-62
 Identities = 130/202 (64%), Positives = 148/202 (73%)
 Frame = -2

Query: 616 EMEVDAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVALGAVSSADGSALAKIGHTTM 437
           EMEVDAFRRLFPLRF+E HLL+SVRPD+R LG ARDTT+ALGAV+SADGSALAKIG TTM
Sbjct: 13  EMEVDAFRRLFPLRFHEHHLLKSVRPDARKLGSARDTTLALGAVASADGSALAKIGSTTM 72

Query: 436 LAAIKMEVMAPSLGSPDEGCVAIDFYMPPICSPSVRPGQTSDVAPVISKQLSDAILSSGM 257
           LAAIKMEVM P +  PDEG +AI+F+MPPICSP VRPG+ ++ A VISKQLSD ILSSGM
Sbjct: 73  LAAIKMEVMTPIVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVISKQLSDTILSSGM 132

Query: 256 INLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXXXXXX 77
           I+LKEL L+ GKAAWM YLD+YCLDADG                L IP            
Sbjct: 133 IDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIPVVSLNDDGRIVL 192

Query: 76  VPGEHVEGKSVREPINREKRKL 11
           V  + V  K  +EP+N EKRKL
Sbjct: 193 VSEDTVRLKLEKEPVNTEKRKL 214