BLASTX nr result
ID: Sinomenium22_contig00006275
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00006275
(693 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007028731.1| 3'-5'-exoribonuclease family protein [Theobr... 267 3e-69
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l... 266 5e-69
ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-l... 265 1e-68
ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citr... 260 3e-67
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu... 260 3e-67
emb|CBI29839.3| unnamed protein product [Vitis vinifera] 257 3e-66
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ... 256 6e-66
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l... 253 4e-65
ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu... 251 1e-64
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil... 251 1e-64
ref|XP_007133470.1| hypothetical protein PHAVU_011G181200g [Phas... 251 2e-64
ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-l... 248 1e-63
ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [... 248 2e-63
ref|NP_001275073.1| 3'-5'-exoribonuclease/RNA binding protein-li... 248 2e-63
ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-l... 247 3e-63
gb|EYU20751.1| hypothetical protein MIMGU_mgv1a010701mg [Mimulus... 246 4e-63
ref|NP_176216.1| 3'-5'-exoribonuclease family protein [Arabidops... 246 5e-63
ref|XP_002308947.1| 3' exoribonuclease domain 1-containing famil... 246 7e-63
ref|XP_007202373.1| hypothetical protein PRUPE_ppa009278mg [Prun... 244 1e-62
ref|XP_002886636.1| predicted protein [Arabidopsis lyrata subsp.... 244 1e-62
>ref|XP_007028731.1| 3'-5'-exoribonuclease family protein [Theobroma cacao]
gi|508717336|gb|EOY09233.1| 3'-5'-exoribonuclease family
protein [Theobroma cacao]
Length = 302
Score = 267 bits (682), Expect = 3e-69
Identities = 137/209 (65%), Positives = 161/209 (77%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ E+EV+AFRRLFPLRFYE+HL ES+RPD+RPLG+ARDTT+A GAV+SA+GSALAK
Sbjct: 7 SGDLSTEVEVDAFRRLFPLRFYEKHLSESIRPDARPLGRARDTTIALGAVASANGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PS + DEGCVAIDF+MPPICSP VRPG+ ++AAPV+SKQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSTETPDEGCVAIDFHMPPICSPIVRPGRPAEAAPVVSKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
ILSSGMI+LKEL L++GKAAWM YLD+YCLDADG L IP
Sbjct: 127 ILSSGMISLKELCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLEIPVVSLND 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLT 8
+ E EG S REP+N+EKRKLT
Sbjct: 187 DGKIVLL-SEEQEGMSEREPVNKEKRKLT 214
>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
Length = 303
Score = 266 bits (680), Expect = 5e-69
Identities = 136/211 (64%), Positives = 162/211 (76%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EMEV+AFRRLFPLR++ER LL+S+RPD+RPLG+ARDT++A GAV+SADGSALAK
Sbjct: 7 SGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAA+KMEVM P S DEG +AI+FYMPPICSP VRPG+ ++ APV+SKQLSD
Sbjct: 67 IGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
ILSSGMINLKELSL++GKAAWM YLD+YCLDADG LRIP
Sbjct: 127 ILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSLNE 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
V E+ EGKS +EP+N+ KRKLT S
Sbjct: 187 EGRVVVVSEENEEGKSEKEPVNKGKRKLTLS 217
>ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Citrus
sinensis] gi|568873742|ref|XP_006489987.1| PREDICTED:
exosome complex component RRP43-like isoform X2 [Citrus
sinensis]
Length = 302
Score = 265 bits (677), Expect = 1e-68
Identities = 136/209 (65%), Positives = 161/209 (77%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
S D++ EMEV+AFRRLFPLR++ERHL ES+RPD+RPL +ARDTT++ GAV+SADGSALAK
Sbjct: 7 SEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDARPLSRARDTTISMGAVASADGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PSL S DEGCV+IDF+MPPICSP VRPG+ ++AAPV++KQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I SSGMINLKELSL+ GKAAWMVYLD+YCLDADG L+IP
Sbjct: 127 ISSSGMINLKELSLVGGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSNLQIPT-VSLD 185
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLT 8
+P E E S +EP+N+EKRKLT
Sbjct: 186 DGKIVMLPEEQKEENSEKEPVNKEKRKLT 214
>ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citrus clementina]
gi|567857414|ref|XP_006421390.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
gi|557523262|gb|ESR34629.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
gi|557523263|gb|ESR34630.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
Length = 302
Score = 260 bits (664), Expect = 3e-67
Identities = 134/209 (64%), Positives = 160/209 (76%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
S D++ EMEV+AFRRLFPLR++ERHL ES+RPD+R L +AR+TT++ GAV+SADGSALAK
Sbjct: 7 SEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDARSLSRARNTTISMGAVASADGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PSL S DEGCV+IDF+MPPICSP VRPG+ ++AAPV++KQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I SSGMINLKELSL+ GKAAWMVYLD+YCLDADG L+IP
Sbjct: 127 ISSSGMINLKELSLVGGKAAWMVYLDIYCLDADGALFDAALLSAVAAFSNLQIPT-VSLD 185
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLT 8
+P E E S +EP+N+EKRKLT
Sbjct: 186 DGKIVMLPEEQKEENSEKEPVNKEKRKLT 214
>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
gi|550335486|gb|ERP58806.1| hypothetical protein
POPTR_0006s04970g [Populus trichocarpa]
Length = 303
Score = 260 bits (664), Expect = 3e-67
Identities = 136/211 (64%), Positives = 158/211 (74%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EMEV+AFRRLFPLR++ERHL ES+RPD+RPLG+ARDTT+A GAV+SA GSALAK
Sbjct: 7 SGDLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PS S +EG +AIDF+MPPICSP VRPG+ ++AAPVISKQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I SSGMINLKELSL++GKAAWM YLD+YCLDADG L+IP
Sbjct: 127 ISSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVGAFSHLQIPIVSLND 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
V E K EP+N+EKRKLT S
Sbjct: 187 DGKIVLVSEEDDGTKLEEEPVNKEKRKLTLS 217
>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
Length = 311
Score = 257 bits (656), Expect = 3e-66
Identities = 135/219 (61%), Positives = 161/219 (73%), Gaps = 8/219 (3%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EMEV+AFRRLFPLR++ER LL+S+RPD+RPLG+ARDT++A GAV+SADGSALAK
Sbjct: 7 SGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAA+KMEVM P S DEG +AI+FYMPPICSP VRPG+ ++ APV+SKQLSD
Sbjct: 67 IGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSKQLSDT 126
Query: 274 ILS--------SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLR 119
IL SGMINLKELSL++GKAAWM YLD+YCLDADG LR
Sbjct: 127 ILRHVNVVTSFSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLR 186
Query: 118 IPAXXXXXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
IP V E+ EGKS +EP+N+ KRKLT S
Sbjct: 187 IPVVSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLS 225
>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
gi|223528261|gb|EEF30313.1| exosome complex exonuclease
rrp43, putative [Ricinus communis]
Length = 303
Score = 256 bits (653), Expect = 6e-66
Identities = 131/209 (62%), Positives = 156/209 (74%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EME +AFRRLFPL F+ERHL ES+RPD R LG+ARDTT+A GAV SADGSA+AK
Sbjct: 7 SGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSADGSAIAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTM+AAIKMEVM PS S DEGC+AIDF+MPPICSP VRPG+ ++AAPV+SKQLSD
Sbjct: 67 IGSTTMMAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVSKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I+SS MI+LKELSL++GKAAWM YLD+YCLDADG L+IP
Sbjct: 127 IMSSAMIDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALFSAVAAFTNLQIPIVSLND 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLT 8
V E+ GK +E +N+EKRKLT
Sbjct: 187 DGKVVVVSDENEGGKREKEAVNKEKRKLT 215
>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
complex component RRP43-like [Cucumis sativus]
Length = 304
Score = 253 bits (646), Expect = 4e-65
Identities = 129/211 (61%), Positives = 155/211 (73%)
Frame = -3
Query: 643 DGGSGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSA 464
+ SGD++ +MEV+AFRRLFP++FYERHL ES+RPD R LGKARDTT+A G VSSA+GSA
Sbjct: 5 NAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSA 64
Query: 463 LAKIGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQL 284
LAKIG TTMLAAIKMEVM PS+ S DEGC+A+DF+MPP+CSP VRPG+ ++AAPVISKQL
Sbjct: 65 LAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVISKQL 124
Query: 283 SDAILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXX 104
SD I SSGMI+L+ELSL+ GKAAWM YLD+YCLDADG L+IP
Sbjct: 125 SDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVA 184
Query: 103 XXXXXXXXXVPGEHVEGKSVREPINREKRKL 11
V E +EP+N+E RKL
Sbjct: 185 LNDDGKVVFVCEEEGGENFEKEPVNKENRKL 215
>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
gi|550320907|gb|ERP51579.1| hypothetical protein
POPTR_0016s05590g [Populus trichocarpa]
Length = 323
Score = 251 bits (642), Expect = 1e-64
Identities = 136/231 (58%), Positives = 158/231 (68%), Gaps = 20/231 (8%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EMEV+AFR LFPLR++ERHL ES+RPD+RPLG+ARDTT+A GAV+SA GSALAK
Sbjct: 7 SGDLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PS S DEGC+AIDF+MPPICSP VRPG+ ++AAPVISKQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDT 126
Query: 274 ILS--------------------SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXX 155
I SGMINLKELSL++GKAAWM YLD+YCLDADG
Sbjct: 127 ISRQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAA 186
Query: 154 XXXXXXXXXXLRIPAXXXXXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
L+IP V E K +EP+N+EKRKLT S
Sbjct: 187 LLSAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLS 237
>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222867347|gb|EEF04478.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 439
Score = 251 bits (642), Expect = 1e-64
Identities = 136/231 (58%), Positives = 158/231 (68%), Gaps = 20/231 (8%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EMEV+AFR LFPLR++ERHL ES+RPD+RPLG+ARDTT+A GAV+SA GSALAK
Sbjct: 7 SGDLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PS S DEGC+AIDF+MPPICSP VRPG+ ++AAPVISKQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDT 126
Query: 274 ILS--------------------SGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXX 155
I SGMINLKELSL++GKAAWM YLD+YCLDADG
Sbjct: 127 ISRQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAA 186
Query: 154 XXXXXXXXXXLRIPAXXXXXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
L+IP V E K +EP+N+EKRKLT S
Sbjct: 187 LLSAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLS 237
>ref|XP_007133470.1| hypothetical protein PHAVU_011G181200g [Phaseolus vulgaris]
gi|561006470|gb|ESW05464.1| hypothetical protein
PHAVU_011G181200g [Phaseolus vulgaris]
Length = 301
Score = 251 bits (641), Expect = 2e-64
Identities = 128/207 (61%), Positives = 157/207 (75%)
Frame = -3
Query: 628 DIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAKIG 449
D++ EMEV+AFRRLFPLR++ERHL ES+RPD RPLGKAR+T++ GAVS+A GSAL KIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVSTAHGSALVKIG 68
Query: 448 HTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDAIL 269
TTMLAA+KMEVM+PSL S DEGC+A+DF+MPPICSP VRPG+ ++A+PV+SKQLSD I
Sbjct: 69 STTMLAAVKMEVMSPSLESPDEGCLAVDFFMPPICSPIVRPGRPAEASPVVSKQLSDTIS 128
Query: 268 SSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXX 89
SS MI+LKELSL++GKAAWM YLD+YCLDADG L+IPA
Sbjct: 129 SSKMIDLKELSLVSGKAAWMTYLDIYCLDADGSLYDAALLSAVAALSHLQIPAVAMNDDG 188
Query: 88 XXXXVPGEHVEGKSVREPINREKRKLT 8
V E + K +EP+N+EKRKLT
Sbjct: 189 KIVLVSDEDGQ-KRAQEPVNKEKRKLT 214
>ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Glycine
max] gi|571509874|ref|XP_006596185.1| PREDICTED: exosome
complex component RRP43-like isoform X4 [Glycine max]
Length = 299
Score = 248 bits (634), Expect = 1e-63
Identities = 128/209 (61%), Positives = 155/209 (74%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
S D++ EMEV+AFRRLFPLR++ERHL ES+RPD RPLGKAR+T++ GAV+SA+GSAL K
Sbjct: 7 SEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSALVK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTML AIKMEVM PSL S DEGC+AIDF+MPPICSP VRPG+ ++A+PV+SKQLSD
Sbjct: 67 IGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I SS MI+LKELSL+ GKAAWM YLD+YCLDADG L+IPA
Sbjct: 127 ISSSRMIDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIPAVAMND 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLT 8
V G+ ++P+N+EKRKLT
Sbjct: 187 DGKIVL-----VSGEDGQKPVNKEKRKLT 210
>ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [Solanum tuberosum]
Length = 303
Score = 248 bits (632), Expect = 2e-63
Identities = 132/213 (61%), Positives = 153/213 (71%)
Frame = -3
Query: 649 AGDGGSGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADG 470
A GS D++ EMEV+AFRRLFPLRF+E HLL+SVRPD+R LG ARDTT+A GAV+SADG
Sbjct: 2 AAANGSSDLSSEMEVDAFRRLFPLRFHEHHLLKSVRPDARKLGSARDTTLALGAVASADG 61
Query: 469 SALAKIGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISK 290
SALAKIG TTMLAAIKMEVM P + DEG +AI+F+MPPICSP VRPG+ ++AA VISK
Sbjct: 62 SALAKIGSTTMLAAIKMEVMTPIVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVISK 121
Query: 289 QLSDAILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPA 110
QLSD ILSSGMI+LKEL L+ GKAAWM YLD+YCLDADG L IP
Sbjct: 122 QLSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIPV 181
Query: 109 XXXXXXXXXXXVPGEHVEGKSVREPINREKRKL 11
V + V K +EP+N EKRKL
Sbjct: 182 VSLNDDGRIVLVSEDTVRLKLEKEPVNTEKRKL 214
>ref|NP_001275073.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
tuberosum] gi|83283957|gb|ABC01886.1|
3'-5'-exoribonuclease/RNA binding protein-like protein
[Solanum tuberosum]
Length = 314
Score = 248 bits (632), Expect = 2e-63
Identities = 131/213 (61%), Positives = 154/213 (72%)
Frame = -3
Query: 649 AGDGGSGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADG 470
A GS D++ EMEV+AFRRLFPLR++E HLL+SVRPD+R LG ARDTT+A GAV+SADG
Sbjct: 2 AAANGSSDLSSEMEVDAFRRLFPLRYHEHHLLKSVRPDARKLGSARDTTLALGAVASADG 61
Query: 469 SALAKIGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISK 290
SALAKIG TTMLAAIKMEVM P++ DEG +AI+F+MPPICSP VRPG+ ++AA VISK
Sbjct: 62 SALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVISK 121
Query: 289 QLSDAILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPA 110
QLSD ILSSGMI+LKEL L+ GKAAWM YLD+YCLDADG L IP
Sbjct: 122 QLSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIPV 181
Query: 109 XXXXXXXXXXXVPGEHVEGKSVREPINREKRKL 11
V + V K +EP+N EKRKL
Sbjct: 182 VSLNDDGRIVLVSEDTVRLKLEKEPVNTEKRKL 214
>ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
Length = 302
Score = 247 bits (630), Expect = 3e-63
Identities = 128/209 (61%), Positives = 156/209 (74%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
S D++ EMEV+AFRRLFPLR++ERHL ES+RPD RPLGKAR+T++ GAV+SA+GSAL K
Sbjct: 7 SEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSALVK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TT+L AIKMEVM PSL S DEGC+AIDF+MPPICSP VRPG+ ++A+PV+SKQLSD
Sbjct: 67 IGSTTILTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I SS MI+LKELSL++GKAAWM YLD+YCLDADG L+IP
Sbjct: 127 ISSSKMIDLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVASLSHLQIPVVAMND 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLT 8
V E + K +EP+N+EKRKLT
Sbjct: 187 DGKIVLVSEEDGQ-KREQEPVNKEKRKLT 214
>gb|EYU20751.1| hypothetical protein MIMGU_mgv1a010701mg [Mimulus guttatus]
gi|604301032|gb|EYU20752.1| hypothetical protein
MIMGU_mgv1a010701mg [Mimulus guttatus]
Length = 304
Score = 246 bits (629), Expect = 4e-63
Identities = 127/210 (60%), Positives = 155/210 (73%), Gaps = 1/210 (0%)
Frame = -3
Query: 637 GSGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALA 458
G D++ EMEV+AFRRLFPLRF+ERHLLES+RPD RPLG+ARDTT+ GAV+SA+GSA+A
Sbjct: 6 GPNDLSSEMEVDAFRRLFPLRFHERHLLESLRPDGRPLGRARDTTLMLGAVASANGSAMA 65
Query: 457 KIGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSD 278
KIG TTMLAAIKMEVM P+ + DEGC+AI+F+MPPICSP VRPG+ ++ APVISKQLSD
Sbjct: 66 KIGSTTMLAAIKMEVMTPTAEAPDEGCIAIEFHMPPICSPLVRPGRPAEVAPVISKQLSD 125
Query: 277 AILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXX 98
ILSSGMI+LKEL L+ GKAAWM YLD+YCLDADG L+IP
Sbjct: 126 TILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIPVVSLN 185
Query: 97 XXXXXXXVPGEHVEG-KSVREPINREKRKL 11
+ ++ G +EP+N+EK KL
Sbjct: 186 DDGRIVIISEDNNGGAMKEKEPVNKEKIKL 215
>ref|NP_176216.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
gi|4249388|gb|AAD14485.1| Similar to gb|AF025438
Opa-interacting protein (OIP2) from Homo sapiens
[Arabidopsis thaliana] gi|28416659|gb|AAO42860.1|
At1g60080 [Arabidopsis thaliana]
gi|110735926|dbj|BAE99938.1| hypothetical protein
[Arabidopsis thaliana] gi|332195536|gb|AEE33657.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana]
Length = 302
Score = 246 bits (628), Expect = 5e-63
Identities = 129/210 (61%), Positives = 156/210 (74%), Gaps = 3/210 (1%)
Frame = -3
Query: 628 DIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAKIG 449
D++ EMEV+AFRR+FPLRF+ERHL ES+RPD R LGKARDT V G VS+ADGSALAKIG
Sbjct: 9 DLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIG 68
Query: 448 HTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDAIL 269
TTMLAAI+MEVM PS S DEGC+AI+F+MPPICSP+VRPG+ ++AAPVISK+LSD IL
Sbjct: 69 STTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL 128
Query: 268 SSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXXXX 89
SSGMI+LKEL L++GKAAWM YLD+YCLDADG L+IP
Sbjct: 129 SSGMIDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIVALNDNG 188
Query: 88 XXXXVPGEHVEGKSV---REPINREKRKLT 8
V GE + ++ +E +N+EKRKLT
Sbjct: 189 RIVAVTGEKDQDNALITEKEAVNKEKRKLT 218
>ref|XP_002308947.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222854923|gb|EEE92470.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 318
Score = 246 bits (627), Expect = 7e-63
Identities = 134/226 (59%), Positives = 159/226 (70%), Gaps = 15/226 (6%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD++ EMEV+AFRRLFPLR++ERHL ES+RPD+RPLG+ARDTT+A GAV+SA GSALAK
Sbjct: 7 SGDLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAIKMEVM PS S +EG +AIDF+MPPICSP VRPG+ ++AAPVISKQLSD
Sbjct: 67 IGSTTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDT 126
Query: 274 I---LSSGMINLKELSLITGKAAWMVYLDVYCLDAD------------GXXXXXXXXXXX 140
I ++SGMINLKELSL++GKAAWM YLD+YCLDAD G
Sbjct: 127 ISRQVNSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVGAFSHSAFIYYR 186
Query: 139 XXXXXLRIPAXXXXXXXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
++IP V E K EP+N+EKRKLT S
Sbjct: 187 SLICAVQIPIVSLNDDGKIVLVSEEDDGTKLEEEPVNKEKRKLTLS 232
>ref|XP_007202373.1| hypothetical protein PRUPE_ppa009278mg [Prunus persica]
gi|462397904|gb|EMJ03572.1| hypothetical protein
PRUPE_ppa009278mg [Prunus persica]
Length = 299
Score = 244 bits (624), Expect = 1e-62
Identities = 127/211 (60%), Positives = 152/211 (72%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
SGD+ EM+V+AFRRLFPLRF+E HL++S RPD R L +AR+T+ A GAV+SADGSAL K
Sbjct: 7 SGDVLSEMDVDAFRRLFPLRFFETHLVKSTRPDGRSLAEARETSSALGAVASADGSALVK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG T MLAAIKMEVM PS S DEGC+AIDF+MPPICSP+VRPG+ ++AAPV+SKQLSD
Sbjct: 67 IGSTRMLAAIKMEVMTPSKESPDEGCIAIDFHMPPICSPTVRPGRPAEAAPVVSKQLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
I S GMINLKELSLI+ KAAWM YLD+YCLDADG L+IP
Sbjct: 127 ISSCGMINLKELSLISRKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIPVVSMND 186
Query: 94 XXXXXXVPGEHVEGKSVREPINREKRKLTFS 2
+ G+H +EP+N+ KRKLT S
Sbjct: 187 DGKVVVLSGDH----GGKEPVNKGKRKLTLS 213
>ref|XP_002886636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332477|gb|EFH62895.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 302
Score = 244 bits (624), Expect = 1e-62
Identities = 129/212 (60%), Positives = 157/212 (74%), Gaps = 3/212 (1%)
Frame = -3
Query: 634 SGDIAGEMEVEAFRRLFPLRFYERHLLESVRPDSRPLGKARDTTVAFGAVSSADGSALAK 455
S D++ EMEV+AFRR+FPLRF+ERHL ES+RPD R LGKARDT V G VS+ADGSALAK
Sbjct: 7 SQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAK 66
Query: 454 IGHTTMLAAIKMEVMAPSLGSLDEGCVAIDFYMPPICSPSVRPGQTSDAAPVISKQLSDA 275
IG TTMLAAI+MEVM PS S DEGC+A++F+MPPICSP+VRPG+ +DAAPVISK+LSD
Sbjct: 67 IGSTTMLAAIRMEVMTPSTDSPDEGCIALEFHMPPICSPTVRPGRPADAAPVISKRLSDT 126
Query: 274 ILSSGMINLKELSLITGKAAWMVYLDVYCLDADGXXXXXXXXXXXXXXXXLRIPAXXXXX 95
ILSSGMI+LKEL L++GKAAWM YLD+YCLDADG L+IP
Sbjct: 127 ILSSGMIDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLSAVAAFSNLQIPVVALND 186
Query: 94 XXXXXXVP-GEHVEGKSV--REPINREKRKLT 8
+ G+ + S+ +E +N+EKRKLT
Sbjct: 187 NGRIVAITGGKDQDNASITEKEAVNKEKRKLT 218