BLASTX nr result
ID: Sinomenium22_contig00004500
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00004500
(398 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848193.1| hypothetical protein AMTR_s00029p00239610 [A... 125 6e-27
ref|XP_007133907.1| hypothetical protein PHAVU_010G002100g [Phas... 123 3e-26
gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [V... 123 3e-26
ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C... 123 3e-26
ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C... 123 3e-26
gb|ACU19827.1| unknown [Glycine max] 121 9e-26
gb|ABX47016.1| chloroplast chlorophyll a/b binding protein cab-P... 121 1e-25
gb|ABW90990.1| LHCB4 [Bambusa oldhamii] 121 1e-25
ref|XP_002882591.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata] g... 120 1e-25
ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago tr... 120 1e-25
gb|ACJ84724.1| unknown [Medicago truncatula] gi|388501002|gb|AFK... 120 1e-25
ref|XP_006366348.1| PREDICTED: chlorophyll a-b binding protein C... 119 3e-25
ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group] g... 119 6e-25
gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japo... 119 6e-25
emb|CAA06961.1| chlorophyll a/b-binding protein [Hordeum vulgare... 118 7e-25
ref|XP_006407730.1| hypothetical protein EUTSA_v10021263mg [Eutr... 118 7e-25
ref|XP_006300034.1| hypothetical protein CARUB_v10016258mg [Caps... 118 7e-25
gb|EXC23662.1| hypothetical protein L484_015572 [Morus notabilis] 118 1e-24
ref|XP_007026729.1| Light-harvesting complex II protein Lhcb4 [T... 118 1e-24
ref|NP_187506.1| light harvesting complex photosystem II interac... 118 1e-24
>ref|XP_006848193.1| hypothetical protein AMTR_s00029p00239610 [Amborella trichopoda]
gi|548851498|gb|ERN09774.1| hypothetical protein
AMTR_s00029p00239610 [Amborella trichopoda]
Length = 291
Score = 125 bits (314), Expect = 6e-27
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS
Sbjct: 231 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 290
Query: 216 S 214
S
Sbjct: 291 S 291
>ref|XP_007133907.1| hypothetical protein PHAVU_010G002100g [Phaseolus vulgaris]
gi|561006952|gb|ESW05901.1| hypothetical protein
PHAVU_010G002100g [Phaseolus vulgaris]
Length = 289
Score = 123 bits (308), Expect = 3e-26
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 229 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 123 bits (308), Expect = 3e-26
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 229 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Glycine max]
Length = 290
Score = 123 bits (308), Expect = 3e-26
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 229 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 123 bits (308), Expect = 3e-26
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 229 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>gb|ACU19827.1| unknown [Glycine max]
Length = 290
Score = 121 bits (304), Expect = 9e-26
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMVGFLGFAVQAA TGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 229 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>gb|ABX47016.1| chloroplast chlorophyll a/b binding protein cab-PhE7 [Phyllostachys
edulis]
Length = 287
Score = 121 bits (303), Expect = 1e-25
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKK LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS
Sbjct: 226 SDPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 285
Query: 216 S 214
S
Sbjct: 286 S 286
>gb|ABW90990.1| LHCB4 [Bambusa oldhamii]
Length = 287
Score = 121 bits (303), Expect = 1e-25
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKK LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS
Sbjct: 226 SDPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 285
Query: 216 S 214
S
Sbjct: 286 S 286
>ref|XP_002882591.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata]
gi|297328431|gb|EFH58850.1| LHCB4.2 [Arabidopsis lyrata
subsp. lyrata]
Length = 287
Score = 120 bits (302), Expect = 1e-25
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKA LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 227 SDPEKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
Query: 216 S 214
S
Sbjct: 287 S 287
>ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355505708|gb|AES86850.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 347
Score = 120 bits (302), Expect = 1e-25
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 287 SDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 346
Query: 216 S 214
S
Sbjct: 347 S 347
>gb|ACJ84724.1| unknown [Medicago truncatula] gi|388501002|gb|AFK38567.1| unknown
[Medicago truncatula]
Length = 289
Score = 120 bits (302), Expect = 1e-25
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 229 SDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>ref|XP_006366348.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Solanum tuberosum]
Length = 285
Score = 119 bits (299), Expect = 3e-25
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 223
+DPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF
Sbjct: 224 ADPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 281
>ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|3075488|gb|AAC14566.1| chlorophyll a/b-binding
protein [Oryza sativa Japonica Group]
gi|34394009|dbj|BAC84033.1| chlorophyll a/b-binding
protein [Oryza sativa Japonica Group]
gi|113611511|dbj|BAF21889.1| Os07g0558400 [Oryza sativa
Japonica Group] gi|125558786|gb|EAZ04322.1| hypothetical
protein OsI_26463 [Oryza sativa Indica Group]
gi|215704418|dbj|BAG93852.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737393|dbj|BAG96322.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737709|dbj|BAG96839.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764955|dbj|BAG86652.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767447|dbj|BAG99675.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 290
Score = 119 bits (297), Expect = 6e-25
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKK LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS
Sbjct: 229 SDPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 288
Query: 216 S 214
S
Sbjct: 289 S 289
>gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japonica Group]
Length = 267
Score = 119 bits (297), Expect = 6e-25
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKK LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS
Sbjct: 206 SDPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 265
Query: 216 S 214
S
Sbjct: 266 S 266
>emb|CAA06961.1| chlorophyll a/b-binding protein [Hordeum vulgare subsp. vulgare]
Length = 75
Score = 118 bits (296), Expect = 7e-25
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
+DPEKK TLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF S
Sbjct: 15 ADPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGS 74
Query: 216 S 214
S
Sbjct: 75 S 75
>ref|XP_006407730.1| hypothetical protein EUTSA_v10021263mg [Eutrema salsugineum]
gi|557108876|gb|ESQ49183.1| hypothetical protein
EUTSA_v10021263mg [Eutrema salsugineum]
Length = 287
Score = 118 bits (296), Expect = 7e-25
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 227 SDPEKKAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
Query: 216 S 214
S
Sbjct: 287 S 287
>ref|XP_006300034.1| hypothetical protein CARUB_v10016258mg [Capsella rubella]
gi|482568743|gb|EOA32932.1| hypothetical protein
CARUB_v10016258mg [Capsella rubella]
Length = 287
Score = 118 bits (296), Expect = 7e-25
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 227 SDPEKKAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
Query: 216 S 214
S
Sbjct: 287 S 287
>gb|EXC23662.1| hypothetical protein L484_015572 [Morus notabilis]
Length = 287
Score = 118 bits (295), Expect = 1e-24
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTI DTF+S
Sbjct: 227 SDPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFTS 286
Query: 216 S 214
S
Sbjct: 287 S 287
>ref|XP_007026729.1| Light-harvesting complex II protein Lhcb4 [Theobroma cacao]
gi|508715334|gb|EOY07231.1| Light-harvesting complex II
protein Lhcb4 [Theobroma cacao]
Length = 284
Score = 118 bits (295), Expect = 1e-24
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDPEKKATLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF+S
Sbjct: 225 SDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFTS 284
>ref|NP_187506.1| light harvesting complex photosystem II interacting protein Lhcb4.2
[Arabidopsis thaliana]
gi|38503262|sp|Q9XF88.1|CB4B_ARATH RecName:
Full=Chlorophyll a-b binding protein CP29.2,
chloroplastic; AltName: Full=LHCB4.2; AltName:
Full=LHCII protein 4.2; Flags: Precursor
gi|4741954|gb|AAD28774.1|AF134127_1 Lhcb4.2 protein
[Arabidopsis thaliana]
gi|6403491|gb|AAF07831.1|AC010871_7 putative chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|17473745|gb|AAL38316.1| putative chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|20148559|gb|AAM10170.1| putative chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|332641177|gb|AEE74698.1| light harvesting complex
photosystem II interacting protein Lhcb4.2 [Arabidopsis
thaliana]
Length = 287
Score = 118 bits (295), Expect = 1e-24
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = -3
Query: 396 SDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS 217
SDP KKA LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTFSS
Sbjct: 227 SDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
Query: 216 S 214
S
Sbjct: 287 S 287