BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00004425
         (3056 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   925   0.0  
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   914   0.0  
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   912   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   910   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   909   0.0  
ref|XP_007030611.1| Pseudouridine synthase family protein, putat...   902   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              894   0.0  
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   884   0.0  
ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prun...   880   0.0  
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   878   0.0  
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   877   0.0  
gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus...   869   0.0  
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   863   0.0  
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   857   0.0  
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   855   0.0  
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   849   0.0  
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   849   0.0  
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   847   0.0  
ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt...   845   0.0  
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   837   0.0  

>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  925 bits (2390), Expect = 0.0
 Identities = 466/703 (66%), Positives = 560/703 (79%), Gaps = 8/703 (1%)
 Frame = -1

Query: 2564 PYSNSINTESISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTS 2385
            P   S N+ ++ M T  E+DVGI+C+IS  PGFRG+LKQRYSDFIVNEVD +GNV HLTS
Sbjct: 32   PVIKSSNSLTL-MTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTS 90

Query: 2384 LDAPPEIVEDSKVEKETEIS--HESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPI 2211
            LDAPPE V++ + +   +++  + S+I  FRSL+GD+DA+ L++FI++I SG+ ED  PI
Sbjct: 91   LDAPPEAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPI 150

Query: 2210 VLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGNDKGTNKRKRKE 2031
            VLSPDS+KSHRTA+HNFFKEN +FLVTDTVDGPD  SKCIRVRLNSG N+KG N +KRKE
Sbjct: 151  VLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKKRKE 210

Query: 2030 RGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKR 1851
            RG++PYDSRG   WPE +GKFLRFHLYKENKDTQEALGLIGKMLGIQ RSFGFAGTKDKR
Sbjct: 211  RGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKR 270

Query: 1850 SVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKS 1671
            SVSTQRVTVFKQ A RLAALNERLIGIKVG+FCYV +        GNRFTI LRG+VA S
Sbjct: 271  SVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADS 330

Query: 1670 DDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERD 1491
            ++TIK +  SLG+ GFINYFGLQRFGS S+PTH IGA LLRGEW+AA + ILDPREGERD
Sbjct: 331  EETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGERD 390

Query: 1490 SIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVH 1311
             + + REYYKE+ DIEGT+RQLPR+LVAERA+LQCL+KCPGNYLQALKAIPRTLRMMYVH
Sbjct: 391  FVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVH 450

Query: 1310 SYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGD 1131
            SYQSYLWNHAAS+RV+K+G +EV LGDLVYCKG   +K ++ V +E E +N ++AYDC  
Sbjct: 451  SYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEK-VKVVPSEHEDNNFEDAYDCSQ 509

Query: 1130 QDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAK 951
             DEI G +L EGK+N VK ++A D+  G+YTI+DVVLP+PGSR++YP+ND+A+VYHD+AK
Sbjct: 510  LDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAK 569

Query: 950  KDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS 771
            KDGISLTES HN+KEFSIT ++G YRRVFQKPIDFEWELL YTDG++ L+ETDLD IAK+
Sbjct: 570  KDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKT 629

Query: 770  KSFIIEENNSKT------LSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGS 609
            K   + +    T       S D  + +E  +++                      S+  S
Sbjct: 630  KPVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPES 689

Query: 608  DAQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 480
            ++  T KALK+ FTLPASCYATMAIRELLKTSTSV+FHKTLNQ
Sbjct: 690  NSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 732


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  914 bits (2362), Expect = 0.0
 Identities = 469/713 (65%), Positives = 560/713 (78%), Gaps = 8/713 (1%)
 Frame = -1

Query: 2618 TFSSFATVVSQLKPFQLKPYSN---SINTESISMKTPEEADVGIICYISQCPGFRGVLKQ 2448
            + SS ++ +S LKP+ L  Y+    S    + +MKT +E+DVGI CYIS  PGFRG+LKQ
Sbjct: 27   SLSSSSSYISVLKPYSLCNYTTIAASHKALTTAMKTLDESDVGIFCYISNLPGFRGILKQ 86

Query: 2447 RYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSKVEK--ETEISHESQIESFRSLSGDSDA 2274
            RYSDFIVNEVD DGNV HLTSLDAPPE  E+++ E       S+ S+IESFR L+GDSDA
Sbjct: 87   RYSDFIVNEVDTDGNVVHLTSLDAPPETREETRTETIDAGTKSYTSEIESFRCLAGDSDA 146

Query: 2273 ESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKC 2094
            ESL++ I++INSG GE+ SPIVLSP S+KSHRT +HNFFK+NFKFLVTDTVDGPD  SKC
Sbjct: 147  ESLEALINQINSGGGEEVSPIVLSPSSDKSHRTEIHNFFKKNFKFLVTDTVDGPDASSKC 206

Query: 2093 IRVRLNSGG-NDKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALG 1917
            IRVRLNSG  N+ G N +KRKERG++P+D RG DDWPE VGKFLRFHLYKENKD+QEALG
Sbjct: 207  IRVRLNSGRHNNHGRNSKKRKERGDKPFDRRGSDDWPEHVGKFLRFHLYKENKDSQEALG 266

Query: 1916 LIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEX 1737
            LIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFKQ+A RLAALN+RLIGI+VG+FCYV E 
Sbjct: 267  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNDRLIGIQVGDFCYVKEE 326

Query: 1736 XXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAA 1557
                   GNRFT+TLRGVVA S++TIK +A++LG++GFINYFGLQRFGS SVPT+LIGA 
Sbjct: 327  LVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVPTYLIGAM 386

Query: 1556 LLRGEWKAAVNMILDPREGE--RDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCL 1383
            L RGEWK AV+MILDPREG+   D I + REYYKE+ DI+GT+RQLPR+LVAE AILQCL
Sbjct: 387  LFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAENAILQCL 446

Query: 1382 RKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSE 1203
            +KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQK+G  +V +GDLV+CK  + 
Sbjct: 447  KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLVFCKEHNI 506

Query: 1202 QKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVV 1023
            +K       +C+ ++ +  +   D DE+ G EL E ++N VK V+A+D+L G++ IDDVV
Sbjct: 507  EKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGNFAIDDVV 566

Query: 1022 LPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFE 843
            LPLPGSRV+ P ND+A VYHDLAKKD ISLTESAHNVKEFSIT ++G YRRVFQKP+D+E
Sbjct: 567  LPLPGSRVILPTNDIAQVYHDLAKKDAISLTESAHNVKEFSITSMTGSYRRVFQKPVDYE 626

Query: 842  WELLQYTDGNVPLAETDLDIIAKSKSFIIEENNSKTLSVDCKKQVEGLQNEMTPLGXXXX 663
            WELL YT+G +PLAETDLDIIAKSK   + E N    + +  K+ + ++NE   L     
Sbjct: 627  WELLTYTNGTIPLAETDLDIIAKSKPAHVAEENEVNGNEESTKRSKRVENEAV-LQTDDN 685

Query: 662  XXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSV 504
                         S CG+++Q    ALK+ FTLPASCYATMAIRELLKTSTSV
Sbjct: 686  KVDGEREAELQAESTCGTNSQEPQMALKLSFTLPASCYATMAIRELLKTSTSV 738


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  912 bits (2357), Expect = 0.0
 Identities = 468/718 (65%), Positives = 556/718 (77%), Gaps = 15/718 (2%)
 Frame = -1

Query: 2591 SQLKPFQLKPYSNSI--NTESISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEV 2418
            S LKP+ L  Y++       + +MKT +E+D GI+C+IS  PGFRG+LKQRY DFIVNEV
Sbjct: 22   SALKPYPLFCYNSRFCKTLTTTTMKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEV 81

Query: 2417 DCDGNVAHLTSLDAPPEIV----EDSKVEKETEISHESQIESFRSLSGDSDAESLKSFID 2250
            D D  V HLTSLD PPE       ++K   +   S+ S+IESFRSL+GDSDA+ L++ I+
Sbjct: 82   DTDRKVVHLTSLDVPPEEAAVEHNETKASDQLNRSYASEIESFRSLAGDSDAQCLETLIN 141

Query: 2249 RINSGAGEDA-SPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNS 2073
            ++ SG  ED+  PIVLS +S+KSHRTA+HNFFK+NFKFLVTDTVDGPD  SKCIRVRLNS
Sbjct: 142  QVTSGKNEDSIPPIVLSANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNS 201

Query: 2072 GGNDK--GTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKML 1899
            GGN+   G N +KRKERG+ P+DSRG ++WPEQ+GKFLRFHLYKENKDTQEALGLI KML
Sbjct: 202  GGNNNSMGRNSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKML 261

Query: 1898 GIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXX 1719
            GI  RSFGFAGTKDKRSVSTQRVTVFKQ+A +LAALN+RLIGI++G+FCYV E       
Sbjct: 262  GILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQL 321

Query: 1718 XGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEW 1539
             GNRFTITLRGVV  S+D IK +ANSLG+ GFINYFGLQRFGS SVPTHL+GA LLRGEW
Sbjct: 322  LGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEW 381

Query: 1538 KAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYL 1359
            K+AV MILDPREGER+ I + REYYKE+ DI+GT+R+LPR+LVAERAILQCL+KCPGNYL
Sbjct: 382  KSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYL 441

Query: 1358 QALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVD 1179
            QALKAIPRTLRMMYVHSYQS+LWNHAAS RVQKHG   V +GDLV+CKG   +K +  V+
Sbjct: 442  QALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVN 501

Query: 1178 TECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRV 999
             E E ++ ++A D    DE+   +  +G+ N VK V+A+D+  G YTIDDVVLPLPGSRV
Sbjct: 502  PEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRV 561

Query: 998  LYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTD 819
            +YPMNDVA+VYH LA+KDGI+LTES HNVKEFSIT ++G YRRVFQKP+DFEWELL Y D
Sbjct: 562  IYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYID 621

Query: 818  GNVPLAETDLDIIAKSK-SFIIEE-----NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXX 657
            GN PLAETDLD IAK K + I++E      N K    DC KQ E L  ++          
Sbjct: 622  GNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAA 681

Query: 656  XXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLN 483
                       S+CG+D+Q    ALK+G TLP+SCYATMAIRELLKTSTSV+FHKTLN
Sbjct: 682  CAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  910 bits (2352), Expect = 0.0
 Identities = 468/691 (67%), Positives = 538/691 (77%), Gaps = 9/691 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVE--D 2355
            MK  EE+DVGI  YISQ PGFRG+LKQRY DFIVNEVD DGNV HLTSLDAPPE +E  +
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 2354 SKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2175
            +K+  ++   + S+IE FRSL GDSD E LK  ID++ SG  +  SPIVLS  S+KSHRT
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 2174 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGN-DKGTNKRKRKERGERPYDSRGF 1998
            AVHNFFKEN KFLVTDT+DGPD  SKCIRVRLNSGG+ + G N RKRK+R ++P+DSRG 
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 1997 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1818
            D+W E VGKFLRFHLYKENKDTQEA+GLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFK
Sbjct: 181  DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 1817 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1638
            Q A RLAALNERLIGIKVG+FC+V E        GNRFTITLRGVVA S++TIK +A++L
Sbjct: 241  QHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL 300

Query: 1637 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1458
            G+ GFINYFGLQRFGS SVPTHLIGAALLRGEW+ AV++ILDPREGERD+IR+ REYYKE
Sbjct: 301  GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKE 360

Query: 1457 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1278
            S DIEGT+RQ PR+LVAERAILQCL+K PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1277 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1098
            S+RVQ +G  +V LGDLVYCKG + +K    V++E + D C +A+D    DEI   +L E
Sbjct: 421  SMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPE 480

Query: 1097 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 918
             +++ VK + A+DLL G+YTIDDVVLPLPGSR +YP ND+A VYHD AKKD ISLTESAH
Sbjct: 481  ERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAH 540

Query: 917  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFII------ 756
            +VKEFSIT ++GG+RRVFQKPIDFEWELL YT+GN+PLAETD D I KSK   I      
Sbjct: 541  SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDS 600

Query: 755  EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKM 576
               N K  S  C KQ E  ++ +                         S A    +ALK+
Sbjct: 601  RNGNEKENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKL 660

Query: 575  GFTLPASCYATMAIRELLKTSTSVSFHKTLN 483
             FTLPASCYATMAIRELLKTSTSV+F KTLN
Sbjct: 661  SFTLPASCYATMAIRELLKTSTSVAFQKTLN 691


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  909 bits (2349), Expect = 0.0
 Identities = 476/736 (64%), Positives = 564/736 (76%), Gaps = 31/736 (4%)
 Frame = -1

Query: 2594 VSQLKPFQLKPYSNS---INTESISMKTP-----EEADVGIICYISQCPGFRGVLKQRYS 2439
            ++QL    LKPY      + T  + +  P     EE+DVGI+CYISQ PGFRG+LKQRY+
Sbjct: 22   LTQLLKQVLKPYKGQPTRLATSRVPVPVPSTASMEESDVGILCYISQLPGFRGILKQRYA 81

Query: 2438 DFIVNEVDCDGNVAHLTSLDAPPEIVEDSKV-------EKETEI-SHESQIESFRSLSGD 2283
            DFIVNEVD DGNV HLT L+ PP++VE++K        EK +E  S+E++IE FRSL+GD
Sbjct: 82   DFIVNEVDTDGNVVHLTCLEPPPQMVEETKECGAKVSDEKMSESKSYEAEIELFRSLAGD 141

Query: 2282 SDAESLKSFIDRINSGAG-EDASP-IVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPD 2109
            SDAE L+S I +++S  G ED+ P IVLSPDS+K+HRTAVHNFFK+NFKFLVTDT DGPD
Sbjct: 142  SDAEKLESLISQVDSCTGSEDSVPHIVLSPDSDKTHRTAVHNFFKQNFKFLVTDTTDGPD 201

Query: 2108 VGSKCIRVRLNSGGN-DKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDT 1932
              SKCIRVRL+SGG+ + G N +KRKERGE+P+DSRG  +WPE +GKFLRFHLYKENKDT
Sbjct: 202  ASSKCIRVRLDSGGHKNNGRNSKKRKERGEKPFDSRGSSNWPEHLGKFLRFHLYKENKDT 261

Query: 1931 QEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFC 1752
            QEALG+IGKMLGIQ +SFGFAGTKDKR+VSTQRVTVFKQQA RLAALN+RLIGIKVG+FC
Sbjct: 262  QEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAALNDRLIGIKVGDFC 321

Query: 1751 YVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTH 1572
            +V E        GNRFT+TLRGV+A S+DTIK AA+SLG+ GFINYFGLQRFG+ SVPTH
Sbjct: 322  HVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTH 381

Query: 1571 LIGAALLRGEWKAAVNMILDPREGE-----RDSIREVREYYKESCDIEGTIRQLPRYLVA 1407
            LIGAALLRGEWK AV+MILDPREG+        IR+ REYYKES DIEGT+RQLPR+LVA
Sbjct: 382  LIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDIEGTLRQLPRHLVA 441

Query: 1406 ERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDL 1227
            ERA+LQCL+KCPG+YLQA+KAIPRTLRMMYVH YQSYLWNHAAS RVQK+G  +V LGDL
Sbjct: 442  ERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERVQKYGFDQVLLGDL 501

Query: 1226 VYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGG 1047
            VYCKG   +K   GV++EC  DNCD+ YDC   DE  G +LLE K+  VK V+ +D+  G
Sbjct: 502  VYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNTLVKVVTVEDMSTG 561

Query: 1046 DYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRV 867
            +YT+DDVVLP+PGSRV++P N++A VYHDLAKKD I+LTES H VKEFSIT ++G YRRV
Sbjct: 562  NYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKEFSITSMTGSYRRV 621

Query: 866  FQKPIDFEWELLQYTDGNVPLAETDLDIIAK--SKSFIIEENNSK-----TLSVDCKKQV 708
            FQKP+DFEWELL Y D N PLAETDLD I+K  S + I +E   K      LS DC K  
Sbjct: 622  FQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKGDEDNDLS-DCTKLP 680

Query: 707  EGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRE 528
               +N +                      + GS+ Q T  ALK+  TLPASCYATMAIRE
Sbjct: 681  VCSRNSIA----LSSDTNEESEREVESEQVSGSNWQETQMALKLSLTLPASCYATMAIRE 736

Query: 527  LLKTSTSVSFHKTLNQ 480
            LLKTSTSV++HKTLNQ
Sbjct: 737  LLKTSTSVAYHKTLNQ 752


>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508719216|gb|EOY11113.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 763

 Score =  902 bits (2330), Expect = 0.0
 Identities = 465/734 (63%), Positives = 557/734 (75%), Gaps = 39/734 (5%)
 Frame = -1

Query: 2564 PYSNSINTESISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTS 2385
            P   S N+ ++ M T  E+DVGI+C+IS  PGFRG+LKQRYSDFIVNEVD +GNV HLTS
Sbjct: 32   PVIKSSNSLTL-MTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTS 90

Query: 2384 LDAPPEIVED---------------SKVEKETEISHESQIESFRSLSGDSDAESLKSFID 2250
            LDAPPE++ D               +K   +    + S+I  FRSL+GD+DA+ L++FI+
Sbjct: 91   LDAPPEVMIDVFSLNKFTQAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEAFIN 150

Query: 2249 RINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSG 2070
            +I SG+ ED  PIVLSPDS+KSHRTA+HNFFKEN +FLVTDTVDGPD  SKCIRVRLNSG
Sbjct: 151  QITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSG 210

Query: 2069 GNDKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQ 1890
             N+KG N +KRKERG++PYDSRG   WPE +GKFLRFHLYKENKDTQEALGLIGKMLGIQ
Sbjct: 211  NNNKGRNSKKRKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGLIGKMLGIQ 270

Query: 1889 QRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGN 1710
             RSFGFAGTKDKRSVSTQRVTVFKQ A RLAALNERLIGIKVG+FCYV +        GN
Sbjct: 271  PRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGN 330

Query: 1709 RFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAA 1530
            RFTI LRG+VA S++TIK +  SLG+ GFINYFGLQRFGS S+PTH IGA LLRGEW+AA
Sbjct: 331  RFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAA 390

Query: 1529 VNMILDPREGERDSI------------------REVREYYKESCDIEGTIRQLPRYLVAE 1404
             + ILDPREG+  S+                  +  REYYKE+ DIEGT+RQLPR+LVAE
Sbjct: 391  ASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRAREYYKETGDIEGTLRQLPRHLVAE 450

Query: 1403 RAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLV 1224
            RA+LQCL+KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS+RV+K+G +EV LGDLV
Sbjct: 451  RAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLV 510

Query: 1223 YCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGD 1044
            YCKG   +K ++ V +E E +N ++AYDC   DEI G +L EGK+N VK ++A D+  G+
Sbjct: 511  YCKGNDAEK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGN 569

Query: 1043 YTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVF 864
            YTI+DVVLP+PGSR++YP+ND+A+VYHD+AKKDGISLTES HN+KEFSIT ++G YRRVF
Sbjct: 570  YTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVF 629

Query: 863  QKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEENNSKT------LSVDCKKQVEG 702
            QKPIDFEWELL YTDG++ L+ETDLD IAK+K   + +    T       S D  + +E 
Sbjct: 630  QKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDSSDHMEHIES 689

Query: 701  LQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELL 522
             +++                      S+  S++  T KALK+ FTLPASCYATMAIRELL
Sbjct: 690  FEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELL 749

Query: 521  KTSTSVSFHKTLNQ 480
            KTSTSV+FHKTLNQ
Sbjct: 750  KTSTSVAFHKTLNQ 763


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  894 bits (2311), Expect = 0.0
 Identities = 463/691 (67%), Positives = 534/691 (77%), Gaps = 9/691 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVE--D 2355
            MK  EE+DVGI  YISQ PGFRG+LKQRY DFIVNEVD DGNV HLTSLDAPPE +E  +
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 2354 SKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2175
            +K+  ++   + S+IE FRSL GDSD E LK  ID++ SG  +  SPIVLS  S+KSHRT
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 2174 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGN-DKGTNKRKRKERGERPYDSRGF 1998
            AVHNFFKEN KFLVTDT+DGPD  SKCIRVRLNSGG+ + G N RKRK+R ++P+DSRG 
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 1997 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1818
            D+W E VGKFLRFHLYKENKDTQEA+GLIGKMLGIQ RSFGFAGTKDKRSVSTQRVTVFK
Sbjct: 181  DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 1817 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1638
            Q A RLAALNERLIGIKVG+FC+V E        GNRFTITLRGVVA S++TIK +A++L
Sbjct: 241  QHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL 300

Query: 1637 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1458
            G+ GFINYFGLQRFGS SVPTHLIGAALLRGEW+ AV++ILDPREG+   + + REYYKE
Sbjct: 301  GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGDI-LLLKAREYYKE 359

Query: 1457 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1278
            S DIEGT+RQ PR+LVAERAILQCL+K PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 360  SDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 419

Query: 1277 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1098
            S+RVQ +G  +V LGDLVYCKG + +K    V++E + D C +A+D    DEI   +L E
Sbjct: 420  SMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPE 479

Query: 1097 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 918
             +++ VK + A+DLL G+YTIDDVVLPLPGSR +YP ND+A VYHD AKKD ISLTESAH
Sbjct: 480  ERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAH 539

Query: 917  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFII------ 756
            +VKEFSIT ++GG+RRVFQKPIDFEWELL YT+GN+PLAETD D I KSK   I      
Sbjct: 540  SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDS 599

Query: 755  EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKM 576
               N K  S  C KQ E  ++ +                         S A    +ALK+
Sbjct: 600  RNGNEKENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKL 659

Query: 575  GFTLPASCYATMAIRELLKTSTSVSFHKTLN 483
             FTLPASCYATMAIRELLKTSTSV+F KTLN
Sbjct: 660  SFTLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  884 bits (2283), Expect = 0.0
 Identities = 454/689 (65%), Positives = 537/689 (77%), Gaps = 13/689 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIV---- 2361
            MKT +E+D GI+C+IS  PGFRG+LKQRY DFIVNEVD D  V HLTSLD PPE      
Sbjct: 1    MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH 60

Query: 2360 EDSKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDA-SPIVLSPDSNKS 2184
             ++K   +   S+ S+IESFRSL+GDSDA+ L++ I+++ SG  ED+  PIVLS +S+KS
Sbjct: 61   NETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDKS 120

Query: 2183 HRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGNDK--GTNKRKRKERGERPYD 2010
            HRTA+HNFFK+NFKFLVTDTVDGPD  SKCIRVRLNSGGN+   G N +KRKERG+ P+D
Sbjct: 121  HRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRKERGDNPFD 180

Query: 2009 SRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRV 1830
            SRG ++WPEQ+GKFLRFHLYKENKDTQEALGLI KMLGI  RSFGFAGTKDKRSVSTQRV
Sbjct: 181  SRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRV 240

Query: 1829 TVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVA 1650
            TVFKQ+A +LAALN+RLIGI++G+FCYV E        GNRFTITLRGVV  S+D IK +
Sbjct: 241  TVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKAS 300

Query: 1649 ANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVRE 1470
            ANSLG+ GFINYFGLQRFGS SVPTHL+GA LLRGEWK+AV MILDPREG+   + + RE
Sbjct: 301  ANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGDI-LLFKARE 359

Query: 1469 YYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 1290
            YYKE+ DI+GT+R+LPR+LVAERAILQCL+KCPGNYLQALKAIPRTLRMMYVHSYQS+LW
Sbjct: 360  YYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLW 419

Query: 1289 NHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGM 1110
            NHAAS RVQKHG   V +GDLV+CKG   +K +  V+ E E ++ ++A D    DE+   
Sbjct: 420  NHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPET 479

Query: 1109 ELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLT 930
            +  +G+ N VK V+A+D+  G YTIDDVVLPLPGSRV+YPMNDVA+VYH LA+KDGI+LT
Sbjct: 480  DHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLT 539

Query: 929  ESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSK-SFIIE 753
            ES HNVKEFSIT ++G YRRVFQKP+DFEWELL Y DGN PLAETDLD IAK K + I++
Sbjct: 540  ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVK 599

Query: 752  E-----NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMK 588
            E      N K    DC KQ E L  ++                     S+CG+D+Q    
Sbjct: 600  EEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQM 659

Query: 587  ALKMGFTLPASCYATMAIRELLKTSTSVS 501
            ALK+G TLP+SCYATMAIRELLKTSTSVS
Sbjct: 660  ALKLGLTLPSSCYATMAIRELLKTSTSVS 688


>ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
            gi|462403828|gb|EMJ09385.1| hypothetical protein
            PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  880 bits (2273), Expect = 0.0
 Identities = 453/683 (66%), Positives = 530/683 (77%), Gaps = 8/683 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED-- 2355
            MKT EE DVGI CYISQ PGFRG+LKQRYSDF+VNEVD + NV HLT+LDAP E V++  
Sbjct: 1    MKTTEEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVKEIE 60

Query: 2354 SKVEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2175
            +K    T   + ++IESFRSL    DAE L++ I++INSG+ +   PIVLSPD +KSHRT
Sbjct: 61   TKTHDATSKDYTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLSPDYDKSHRT 120

Query: 2174 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRGF 1998
            AVHNFFKENFKFLVTDTVDGPD  SKCIRVR+NSGG N +G N RKRKERG++P+DSRG 
Sbjct: 121  AVHNFFKENFKFLVTDTVDGPDASSKCIRVRINSGGQNSRGRNSRKRKERGDKPFDSRGS 180

Query: 1997 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1818
            DDW E VGKFLRFHLYKENKDTQEALG+I KMLGIQ RSFGFAGTKDKR+V+TQRVTVFK
Sbjct: 181  DDWSENVGKFLRFHLYKENKDTQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFK 240

Query: 1817 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1638
            Q A RLAALN+RLIGIKVG+FCYV E        GNRFTITLRGVVA S+DTIK +  +L
Sbjct: 241  QLASRLAALNDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVIAL 300

Query: 1637 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGE--RDSIREVREYY 1464
            GK+GFINYFGLQRFGS SVPTHLIGA LLRGEWK+ V++ LDPREG+     +   REYY
Sbjct: 301  GKQGFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYY 360

Query: 1463 KESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH 1284
            KE+ DIEGT+RQLPR+LV+E+AILQCL+KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH
Sbjct: 361  KETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH 420

Query: 1283 AASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMEL 1104
            AAS+RVQK+G   V LGDLVYCKG   +K  E V ++C  +N ++  D  D D+I G  L
Sbjct: 421  AASMRVQKYGTDRVVLGDLVYCKGNETEKVSEVVSSKCVDENGNDTLDPIDLDDISGTNL 480

Query: 1103 LEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTES 924
             E + N VK V+A+D+L G+YTIDDVVLP+PGSRV++P ND+A V+HDLAKKD ISLTES
Sbjct: 481  PEERLNLVKAVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTES 540

Query: 923  AHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEEN- 747
             HNVKEFSIT ++G YRRVFQKP+DFEWE+L+Y DGN PL +TD D IAK+K   + E+ 
Sbjct: 541  VHNVKEFSITSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNEDG 600

Query: 746  --NSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMG 573
              + KT   +C     GLQ +                      S+C ++ Q T  ALK+ 
Sbjct: 601  RLHDKTKQSECLDNDIGLQTD-------DNGAKAKGEELPQAESLCDTNPQETQTALKLS 653

Query: 572  FTLPASCYATMAIRELLKTSTSV 504
            FTLPASCYATMAIRELLKTSTSV
Sbjct: 654  FTLPASCYATMAIRELLKTSTSV 676


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  878 bits (2268), Expect = 0.0
 Identities = 456/708 (64%), Positives = 547/708 (77%), Gaps = 25/708 (3%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2349
            M T EE+DVGI CYIS+ PGFRG+LKQRYSDFIVNEVD +GNV HLTSL  P EIVE ++
Sbjct: 49   MTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAE 108

Query: 2348 VEKETEISHE------SQIESFRSLSGDSDAESLKSFIDRINSGAG-EDASPIVLSPDSN 2190
             E+E EI+++      ++IESFR L+GD+D + L++FI+++ S     + SPI+LSPDS+
Sbjct: 109  -EREEEITNQVGKNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSD 167

Query: 2189 KSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGN--DKGTNKRKRKERGERP 2016
            K+HRTA HNFFKE  KFLVTDTVDGPD  SKCIRVRLNS GN  +   N +KRK+R ++P
Sbjct: 168  KAHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKP 227

Query: 2015 YDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQ 1836
            +DSRG D WPE +GKFLRFHLYKENKDTQEA+GLIGKMLGIQ RSFGFAGTKDKRSVSTQ
Sbjct: 228  FDSRGSDHWPEHLGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQ 287

Query: 1835 RVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIK 1656
            RVTVFKQ A RLAALN+RLIGIKVG+FCYVNE        GNRFT+TLRGVVA S+DTIK
Sbjct: 288  RVTVFKQHASRLAALNDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIK 347

Query: 1655 VAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSI--- 1485
             +A+SLG+ GFINYFGLQRFGS SVPTHLIGAALLRGEWK AV+MILDPREG+   +   
Sbjct: 348  GSADSLGRHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVIC 407

Query: 1484 ----REVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMY 1317
                R  REYYKES DI+GT+RQLPRYL AERA+LQCL+KCPGNYLQALKAIPRTLRMMY
Sbjct: 408  FMWMRMAREYYKESDDIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMY 467

Query: 1316 VHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDC 1137
            VHSYQSYLWNHAAS+RVQK+G  +V +GDLVYCKG   ++ I   ++ CE D+C++ Y C
Sbjct: 468  VHSYQSYLWNHAASMRVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGC 527

Query: 1136 GDQDEILGMELLEGKDNSVK---EVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVY 966
             + DE  G +L E KD  VK    V+A+DL  G+YTI+DV+LP+PGSRV YP ND+A VY
Sbjct: 528  SNLDETSGTDLSERKDTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVY 587

Query: 965  HDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLD 786
            HDLA+KD I+L ES H+ KEFSIT ++G YRRVFQKP+DFEWE+L YTDG  PLAETD++
Sbjct: 588  HDLAEKDAINLAESVHSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDME 647

Query: 785  IIAKSKSFII------EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXX 624
             +AK+KS  +      ++N++K+ S DC +Q     N++  L                  
Sbjct: 648  KLAKAKSIELNKEEETKKNDTKSPS-DCMRQPMSSGNDL-HLSAEYNREGEREVEVAKVE 705

Query: 623  SICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 480
             + G + +    ALK+ FTLPASCYATMAIRELLKTSTSV+FHKTLNQ
Sbjct: 706  PLYGPNTRGAQTALKLTFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 753


>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  877 bits (2266), Expect = 0.0
 Identities = 444/693 (64%), Positives = 534/693 (77%), Gaps = 13/693 (1%)
 Frame = -1

Query: 2522 TPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDS--K 2349
            T +E++VGI CYIS  PGFRG+LKQRYSDF+VNEVD +GNV HLT+L+APPE+V+++  K
Sbjct: 2    TTQESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAK 61

Query: 2348 VEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAV 2169
             E      + ++IE FR L+   D E L++FI  +NSG+ +   PIVLSPD +K HRTAV
Sbjct: 62   TEDAASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAV 121

Query: 2168 HNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRGFDD 1992
            HNFFKEN KFLVTD VDGPD  SKCIRVRLNSGG N +G N +KRKERG++P+DSRG DD
Sbjct: 122  HNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDD 181

Query: 1991 WPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQ 1812
            W E VGKFLRFHL+KENKDTQEALG+IGKMLGIQ R+FGFAGTKDKR+V+ QRVTVFKQ 
Sbjct: 182  WSEHVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQF 241

Query: 1811 AKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGK 1632
            A RLAALN+RLIGIKVG+FCYV E        GNRFTITLRGVVA S+D I+ +AN+LGK
Sbjct: 242  ASRLAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGK 301

Query: 1631 KGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKESC 1452
            +GF+NYFGLQRFGS S+PTHLIGA+LLRGEWK+ V+M+L+PREGERD I E R+YYKES 
Sbjct: 302  QGFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESN 361

Query: 1451 DIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASV 1272
            DI+GT+R+LPRYLVAERA+LQCL+KCPGNY QALKA+PRTLRMMYVHSYQSYLWNHAAS+
Sbjct: 362  DIDGTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASM 421

Query: 1271 RVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTEC-----EKDNCDEAYDCGDQDEILGME 1107
            RVQK+G   V +GDLVYCKG   +K    V +EC       +NCD+ +D    D+I    
Sbjct: 422  RVQKYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETN 481

Query: 1106 LLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTE 927
            + E + + VK V+A+D+  G YTIDD+VLPLPGSRV++P ND+A V+HDLAKKDGISLTE
Sbjct: 482  VPEARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTE 541

Query: 926  SAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEEN 747
            S HNVKEFSIT ++G YRRVFQKP+DFEW++L+Y DGN+PL ETD + IAK+K   + + 
Sbjct: 542  SVHNVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKE 601

Query: 746  NSKTLSVDCK-----KQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKAL 582
                +S D       KQ E   N++  L                  S+ G   Q T  AL
Sbjct: 602  YPTGVSGDGSLHDRIKQSECSVNDV-QLPKKDNEVESEGEKLPHVESLGGPIPQGTQIAL 660

Query: 581  KMGFTLPASCYATMAIRELLKTSTSVSFHKTLN 483
            K+ FTLPASCYATMAIRELLKTSTSV+FHKTLN
Sbjct: 661  KLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 693


>gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus guttatus]
          Length = 691

 Score =  869 bits (2245), Expect = 0.0
 Identities = 442/691 (63%), Positives = 528/691 (76%), Gaps = 9/691 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2349
            M + EE+DVGI+CYIS  PGFRG+LKQRYSDFIVNEVD DGNV HLTSL+APP      K
Sbjct: 1    MTSAEESDVGILCYISPLPGFRGILKQRYSDFIVNEVDMDGNVVHLTSLEAPPSEAAGEK 60

Query: 2348 VEK---ETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHR 2178
             EK   + E  + S+IESFR+L GDSDAE LK FID+I+SG   +   IVLSP S+K+HR
Sbjct: 61   KEKVADQLEKDYASEIESFRTLVGDSDAEKLKFFIDQISSGVKTNDESIVLSPSSDKTHR 120

Query: 2177 TAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSG--GNDKGTNKRKRKERGERPYDSR 2004
            TAVHNFFKE  KFLVTDTVDGPD  SKCIRVRLNSG   N +G N RKRK+RG++ YDSR
Sbjct: 121  TAVHNFFKERLKFLVTDTVDGPDSSSKCIRVRLNSGINNNARGNNSRKRKDRGQQQYDSR 180

Query: 2003 GFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTV 1824
            G D WP+  GKFLRF+LYKENKDTQEALG++GKM+G+Q RSFGFAGTKDKRSVSTQRVTV
Sbjct: 181  GTDSWPDNTGKFLRFYLYKENKDTQEALGILGKMIGVQPRSFGFAGTKDKRSVSTQRVTV 240

Query: 1823 FKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAAN 1644
            FKQ+A +LAALN+RL GIKVGNFCYV+E        GNRFTITLR V +  +D I+ +A 
Sbjct: 241  FKQRASKLAALNDRLFGIKVGNFCYVDEELVLGKLQGNRFTITLRSVSSDVEDIIRASAT 300

Query: 1643 SLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYY 1464
            +LG  GFINYFGLQRFGS+S+PTHLIGAALLRGEWKAAV+MILDPREGE+D  R +REYY
Sbjct: 301  ALGNNGFINYFGLQRFGSSSIPTHLIGAALLRGEWKAAVSMILDPREGEKDVTRTIREYY 360

Query: 1463 KESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNH 1284
            KES DIEGT+RQLPR+LVAER+IL C +K PGNYLQAL AIPRTLRMM+VHSYQSYLWNH
Sbjct: 361  KESGDIEGTLRQLPRHLVAERSILYCFQKNPGNYLQALLAIPRTLRMMFVHSYQSYLWNH 420

Query: 1283 AASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMEL 1104
            AAS+RVQK+G+ +V LGDLVYCK    +K  +  ++ECE  N ++ +D    DE+  ++L
Sbjct: 421  AASMRVQKYGMHQVVLGDLVYCKDQEIEKETKFSNSECEDGNGNDTHDDCHVDELSVIDL 480

Query: 1103 LEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTES 924
             E ++  VK +S +D+  G YTIDD+VLPLPGSR+ YP+ND+  +YHD+A+KD ISLT+ 
Sbjct: 481  SEARNTVVKVISEEDIAAGTYTIDDIVLPLPGSRITYPLNDIGKIYHDIARKDNISLTDG 540

Query: 923  AHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS-KSFIIEEN 747
            AHN KEFS T ++G YRRVFQKP DFEWELL+YTD N+PLAETDLDIIAKS  S  + ++
Sbjct: 541  AHNSKEFSFTSITGAYRRVFQKPKDFEWELLKYTDANIPLAETDLDIIAKSGTSTCVGDS 600

Query: 746  NSK---TLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKM 576
            N K    L   C    E L +++                     S+    A  +  ALK+
Sbjct: 601  NDKEQIKLQNGCSSTPENLDDKIERSTGSEETERVREEDIHIEESLGAPKALESQMALKL 660

Query: 575  GFTLPASCYATMAIRELLKTSTSVSFHKTLN 483
             FTLP+SCYATMAIRELLKTSTSV+FHK +N
Sbjct: 661  SFTLPSSCYATMAIRELLKTSTSVAFHKAMN 691


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  863 bits (2231), Expect = 0.0
 Identities = 438/686 (63%), Positives = 527/686 (76%), Gaps = 13/686 (1%)
 Frame = -1

Query: 2522 TPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDS--K 2349
            T +E++VGI CYIS  PGFRG+LKQRYSDF+VNEVD +GNV HLT+L+APPE+V+++  K
Sbjct: 2    TTQESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAK 61

Query: 2348 VEKETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAV 2169
             E      + ++IE FR L+   D E L++FI  +NSG+ +   PIVLSPD +K HRTAV
Sbjct: 62   TEDAASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAV 121

Query: 2168 HNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRGFDD 1992
            HNFFKEN KFLVTD VDGPD  SKCIRVRLNSGG N +G N +KRKERG++P+DSRG DD
Sbjct: 122  HNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDD 181

Query: 1991 WPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQ 1812
            W E VGKFLRFHL+KENKDTQEALG+IGKMLGIQ R+FGFAGTKDKR+V+ QRVTVFKQ 
Sbjct: 182  WSEHVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQF 241

Query: 1811 AKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGK 1632
            A RLAALN+RLIGIKVG+FCYV E        GNRFTITLRGVVA S+D I+ +AN+LGK
Sbjct: 242  ASRLAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGK 301

Query: 1631 KGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKESC 1452
            +GF+NYFGLQRFGS S+PTHLIGA+LLRGEWK+ V+M+L+PREGERD I E R+YYKES 
Sbjct: 302  QGFVNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESN 361

Query: 1451 DIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASV 1272
            DI+GT+R+LPRYLVAERA+LQCL+KCPGNY QALKA+PRTLRMMYVHSYQSYLWNHAAS+
Sbjct: 362  DIDGTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASM 421

Query: 1271 RVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTEC-----EKDNCDEAYDCGDQDEILGME 1107
            RVQK+G   V +GDLVYCKG   +K    V +EC       +NCD+ +D    D+I    
Sbjct: 422  RVQKYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETN 481

Query: 1106 LLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTE 927
            + E + + VK V+A+D+  G YTIDD+VLPLPGSRV++P ND+A V+HDLAKKDGISLTE
Sbjct: 482  VPEARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTE 541

Query: 926  SAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSFIIEEN 747
            S HNVKEFSIT ++G YRRVFQKP+DFEW++L+Y DGN+PL ETD + IAK+K   + + 
Sbjct: 542  SVHNVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKE 601

Query: 746  NSKTLSVDCK-----KQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKAL 582
                +S D       KQ E   N++  L                  S+ G   Q T  AL
Sbjct: 602  YPTGVSGDGSLHDRIKQSECSVNDV-QLPKKDNEVESEGEKLPHVESLGGPIPQGTQIAL 660

Query: 581  KMGFTLPASCYATMAIRELLKTSTSV 504
            K+ FTLPASCYATMAIRELLKTSTSV
Sbjct: 661  KLSFTLPASCYATMAIRELLKTSTSV 686


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  857 bits (2213), Expect = 0.0
 Identities = 452/731 (61%), Positives = 538/731 (73%), Gaps = 35/731 (4%)
 Frame = -1

Query: 2570 LKPYS--NSINTESIS----------MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIV 2427
            LKPY   NS+ T  ++           K+  E+DVGI+ YIS  PGFRG+LKQRYSDFIV
Sbjct: 14   LKPYFLYNSLTTPKLTNRSSSIAVMTTKSVGESDVGILSYISSLPGFRGILKQRYSDFIV 73

Query: 2426 NEVDCDGNVAHLTSLDAPPEIVEDSK---VEKETEISHESQIESFRSLSGDSDAESLKSF 2256
            NEVD DGNV HLTSLDAPPE++       +   T  S+ S+IE FRSL+GDSDAE L+ F
Sbjct: 74   NEVDTDGNVVHLTSLDAPPEVIVSESGPTIVHSTSQSYASEIELFRSLAGDSDAEILEIF 133

Query: 2255 IDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLN 2076
            + +INSG  +D  PIV SPD++K+HRTAVHNFFK+ FKFLVTDT+DGPD  SKC+RVR++
Sbjct: 134  LKQINSGVNDDILPIVFSPDTDKTHRTAVHNFFKK-FKFLVTDTIDGPDSSSKCVRVRVD 192

Query: 2075 SGG-NDKGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKML 1899
            SG  N++G   +KRKERG++P+DSRG D+WPE VGKFLRFHLYKENKDTQEALGLIGKML
Sbjct: 193  SGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKML 252

Query: 1898 GIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXX 1719
            GIQ RSFGFAGTKDKRS+STQRVTVFKQ A R+AALN+RLIGIK+GNF Y+ E       
Sbjct: 253  GIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFSYIQEGLLLGQL 312

Query: 1718 XGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEW 1539
             GNRFTITLRGVVA S+D IK +A +LG+ GFINYFGLQRFGS SVPTHL+GA+LLRGEW
Sbjct: 313  LGNRFTITLRGVVANSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEW 372

Query: 1538 KAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYL 1359
            K AVNMILDPREG+   +   R+YYKES DI+GT++QLPRYLVAERAILQCL+KCPGNYL
Sbjct: 373  KGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAILQCLKKCPGNYL 432

Query: 1358 QALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVD 1179
            QALKAIPRTLRMMYVHSYQSYLWNHAAS+RVQK+GI +V +GDLVYCK    +       
Sbjct: 433  QALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNS 492

Query: 1178 TECEKDNCDEA--YDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGS 1005
             E E ++C +A  YD    +E+  + L   +   VK V+A D+L G++TIDDVVLPLPGS
Sbjct: 493  EEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGS 552

Query: 1004 RVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQY 825
            RVLYP ND+A+VY+DLA KD ISLT S HNVKEFSIT ++G YRRVFQ+P D+EWEL+ Y
Sbjct: 553  RVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISY 612

Query: 824  TDGNVPLAETDLDIIAKSKSFIIEEN-------------NSKTLSVDCKKQVE----GLQ 696
             D N+PLA++DL  + KS+S  I +              +S   SV CKK ++    G +
Sbjct: 613  VDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAGGKE 672

Query: 695  NEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKT 516
            NE                         G   Q    ALK+ FTLPAS YATMAIRELLKT
Sbjct: 673  NEN------------------------GQGTQDPQMALKLSFTLPASSYATMAIRELLKT 708

Query: 515  STSVSFHKTLN 483
            STSV+FHKTLN
Sbjct: 709  STSVAFHKTLN 719


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  855 bits (2210), Expect = 0.0
 Identities = 448/719 (62%), Positives = 540/719 (75%), Gaps = 13/719 (1%)
 Frame = -1

Query: 2600 TVVSQLKPFQLKPYSN--------SINTESISMKTPEEADVGIICYISQCPGFRGVLKQR 2445
            TV+S L P  LKPYS+        +I T    MKT +EADVGI C+ISQ PGFRG+LKQR
Sbjct: 6    TVLSCL-PSLLKPYSSLSWTTKIATIATNFEGMKTVDEADVGISCFISQLPGFRGILKQR 64

Query: 2444 YSDFIVNEVDCDGNVAHLTSLDAPPEIV--EDSKVEKETEI--SHESQIESFRSLSGDSD 2277
            Y+DFIVNEVD DGNV HLTSLD PPE+   E+ K +    +  ++ S +ESF+S+S  +D
Sbjct: 65   YADFIVNEVDMDGNVVHLTSLDLPPEMAVKEEDKAKSCDNVPQNYTSAVESFKSISSVTD 124

Query: 2276 AESLKSFIDRINSGAGEDASPIVLSPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSK 2097
            AE L+  I+++ SG   +  P+VL P S+KS RTA+HNF KENFKFLVTDTVDGPD  SK
Sbjct: 125  AERLEILINQVTSGTDGEVLPVVLDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTSK 184

Query: 2096 CIRVRLNSGGND-KGTNKRKRKERGERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEAL 1920
            CIRVR+NSG N+ +G   +KRKERG++P+DSRG + WPE VGKFLRFHLYKENKDTQEAL
Sbjct: 185  CIRVRVNSGANNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEAL 244

Query: 1919 GLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNE 1740
            GLIGKMLG+Q +SFGF+GTKDKRSVSTQRVTVFKQQA +LAALN+RL GIKVG+FC V E
Sbjct: 245  GLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKE 304

Query: 1739 XXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGA 1560
                    GNRFTITLRGVVA S++TIK +A SLGK GFINYFGLQRFGS SVPTH +GA
Sbjct: 305  GLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGA 364

Query: 1559 ALLRGEWKAAVNMILDPREGERDSIREVREYYKESCDIEGTIRQLPRYLVAERAILQCLR 1380
            ALL+GEWK AV+MILDPRE ER  + + REYYKE+ DI+GT+RQLPRYLVAERAILQCL+
Sbjct: 365  ALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLK 424

Query: 1379 KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQ 1200
            KCPGNYLQALK IPRTLRMMYVHSYQSYLWN+AAS+RV+ +G S+V LGDLV  K  + +
Sbjct: 425  KCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKVDAAK 484

Query: 1199 KPIEGVDTECEKDNCDEAYDCGDQDEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVL 1020
            + ++ + +E   ++ +EA DC   D+   ++L   + + VK VS +DL  G Y+  D+VL
Sbjct: 485  RMVDSLTSE-HNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVL 543

Query: 1019 PLPGSRVLYPMNDVADVYHDLAKKDGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEW 840
            PLPGSRV+YP ND+A++YHDLAKKDGISLTES H VKEFSIT ++GGYRRVFQKPIDFEW
Sbjct: 544  PLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEW 603

Query: 839  ELLQYTDGNVPLAETDLDIIAKSKSFIIEENNSKTLSVDCKKQVEGLQNEMTPLGXXXXX 660
            ELL YTD N PLAETDLD I  +K   +E+  S     D     E ++++  P       
Sbjct: 604  ELLTYTDSNKPLAETDLDRIPMNKP--VEKVGSTEEIED-----ESMKSDTNPHDSGETN 656

Query: 659  XXXXXXXXXXXXSICGSDAQTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLN 483
                             D++ T  ALKM  TLP+SCYATMAIRELLKTSTSV++HKTLN
Sbjct: 657  LKDQTDSNEAEKDTGNPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715


>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  849 bits (2194), Expect = 0.0
 Identities = 447/689 (64%), Positives = 528/689 (76%), Gaps = 7/689 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2349
            MKT +E+DVGI CYIS  PGFRG+LKQRYSDFIVNEVD D NV HLT L+AP E  E+  
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSENKD 60

Query: 2348 VEKETEI--SHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2175
            V    ++  S+ ++IESFRSL+G+SDA+ LK+FID +NSGA      IVLSP S+KSHRT
Sbjct: 61   VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120

Query: 2174 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGND-KGTNKRKRKERGERPYDSRGF 1998
            A+HNFFKE  KFLVTDT+DG +  SKC+RVRLN+  N+ +G + RKRK+R ++ YDSRG 
Sbjct: 121  AIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGS 180

Query: 1997 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1818
            D WP  +GKFLRFHL+KENKDTQEAL +I KMLG+Q RSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181  DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK 240

Query: 1817 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1638
            QQA +LAALN+RLIGIKVG+FC+V E        GNRFTITLRGV A+S+D IK +A +L
Sbjct: 241  QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL 300

Query: 1637 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1458
            GK GFINYFGLQRFGS+SVPTHLIGAALLRGEWKAAV++ILDPREGE+++I  VREYYKE
Sbjct: 301  GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKE 360

Query: 1457 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1278
            S DI+GT+RQLPRYLVAE+AILQCL++ PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SGDIDGTLRQLPRYLVAEKAILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1277 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1098
            S+RVQKHG  +V LGDLVY K   E K  E    ECE  N +   D  + DEI   +L E
Sbjct: 421  SMRVQKHGFDQVVLGDLVYSK--EEYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPE 478

Query: 1097 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 918
             ++  VK ++ +DL  G Y IDDV+LPLPGSRV+YP ND+ +VY DLA+KD ISLTE+AH
Sbjct: 479  ERNIPVKVINEEDLKSGTYAIDDVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETAH 538

Query: 917  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS-KSFIIEE--- 750
             +KEFSIT ++G YRRVFQKP DFEWELL YTDG +PLAETD D+IA S KS + EE   
Sbjct: 539  KIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDPT 598

Query: 749  NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGF 570
            N SK L  D      G   +M   G                 S  G +A+ +  ALK+ F
Sbjct: 599  NGSKELPADSSAISVG--GDMLS-GKVCEEKINNEAGMQSEKSQSGGNAEESQMALKLSF 655

Query: 569  TLPASCYATMAIRELLKTSTSVSFHKTLN 483
            TLPASCYATMA+RELLKTSTSV+FHK+LN
Sbjct: 656  TLPASCYATMAVRELLKTSTSVAFHKSLN 684


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  849 bits (2194), Expect = 0.0
 Identities = 447/689 (64%), Positives = 528/689 (76%), Gaps = 7/689 (1%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVEDSK 2349
            MKT +E+DVGI CYIS  PGFRG+LKQRYSDFIVNEVD D NV HL SL+AP E  E+  
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAPKECSENKD 60

Query: 2348 VEKETEI--SHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHRT 2175
            V    ++  S+ ++IESFRSL+G+SDA+ LK+FID +NSGA      IVLSP S+KSHRT
Sbjct: 61   VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120

Query: 2174 AVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGGND-KGTNKRKRKERGERPYDSRGF 1998
             +HNFFKE  KFLVTDT+DG +  SKC+RVRLN+  N+ +G   RKRK+R ++ YDSRG 
Sbjct: 121  EIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRKRKDRNDKRYDSRGS 180

Query: 1997 DDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFK 1818
            D WP  +GKFLRFHL+KENKDTQEAL +I KMLG+Q RSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181  DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK 240

Query: 1817 QQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANSL 1638
            QQA +LAALN+RLIGIKVG+FC+V E        GNRFTITLRGV A+S+D IK +A +L
Sbjct: 241  QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL 300

Query: 1637 GKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYKE 1458
            GK GFINYFGLQRFGS+SVPTHLIGAALLRGEWKAAV++ILDPREGE+++I  VREYYKE
Sbjct: 301  GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNTISTVREYYKE 360

Query: 1457 SCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 1278
            S DI+GT+RQLPRYLVAE+AILQ L++ PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SGDIDGTLRQLPRYLVAEKAILQSLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1277 SVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELLE 1098
            S+RVQKHG  +V LGDLVY K   + K  E    ECE  N +   D  + DEI   +L E
Sbjct: 421  SMRVQKHGFDQVVLGDLVYSK--EDYKVKESFVAECEDVNDNNMDDYSNLDEISETDLPE 478

Query: 1097 GKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESAH 918
             ++  VK ++ +DL  G YTIDDV+LPL GSRV+YP ND+ +VY DLA+KDGISLTE+AH
Sbjct: 479  ERNIPVKVINEEDLKSGTYTIDDVLLPLSGSRVIYPSNDIGEVYRDLAQKDGISLTETAH 538

Query: 917  NVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKS-KSFIIEE--- 750
             +KEFSIT ++G YRRVFQKP DFEWELL YTDG +PLAETD D+IAKS KS +IEE   
Sbjct: 539  KIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVKSKVIEEVPS 598

Query: 749  NNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKALKMGF 570
            N SK L  D      G   +M   G                 S  G +A+ +  ALK+ F
Sbjct: 599  NGSKELPADSSAISVG--GDMLS-GKVCEETINNEAGMQSEKSQSGGNAEESQMALKLSF 655

Query: 569  TLPASCYATMAIRELLKTSTSVSFHKTLN 483
            TLPASCYATMA+RELLKTSTSV+FHK+LN
Sbjct: 656  TLPASCYATMAVRELLKTSTSVAFHKSLN 684


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  847 bits (2188), Expect = 0.0
 Identities = 440/695 (63%), Positives = 532/695 (76%), Gaps = 10/695 (1%)
 Frame = -1

Query: 2534 ISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED 2355
            ++MKT EE +VGI C+IS  PGFRG+LKQRYSDFIVNEVD DG V  L+SLDAP E  E 
Sbjct: 1    MAMKTAEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPES 60

Query: 2354 SKVE----KETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNK 2187
            S+       +  +S+ SQIESF+SL+GDSDA  L+ FI++IN+G  +  SPIVLSPDS+K
Sbjct: 61   SQENGTNTSDNVVSYASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDK 120

Query: 2186 SHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYD 2010
            SHR A+HNFFKENFKFLVTD VDGPD  SKCIRVRLNS   N+KG N +KRKERG++P+D
Sbjct: 121  SHRKAMHNFFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFD 180

Query: 2009 SRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRV 1830
            SRG ++WP+ VGKFLRFHLYKENKDT EALG+IG ML +Q +SFGFAGTKDKR+V+TQRV
Sbjct: 181  SRGSENWPKNVGKFLRFHLYKENKDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRV 240

Query: 1829 TVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVA 1650
            TV+KQ+A RLA+LN+RL GIK+G+FCYV E        GNRFTITLRG+VA S+D IK +
Sbjct: 241  TVYKQRASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKAS 300

Query: 1649 ANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVRE 1470
            A++LG+ GFINYFGLQRFGS S+PTHLIGAALL+GEWK AV+MILDPR+GE+ +I + R+
Sbjct: 301  ADALGRHGFINYFGLQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARK 360

Query: 1469 YYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 1290
            YYKES D+ GT++QLPRYLVAERA+LQ L+  PGNYLQALK+IPRTLRM+YVHSYQSYLW
Sbjct: 361  YYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLW 420

Query: 1289 NHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGM 1110
            NHAAS RVQK+G   V LGDLVYCK  S  K  E V +E  +D C   YD  ++DEI G 
Sbjct: 421  NHAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAED-CSGRYDSNNEDEISG- 478

Query: 1109 ELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLT 930
            E+ E  D SVK V  +DL  G YTIDDV+LP+PGSR+ YP N +A+VY DLAKKDGISLT
Sbjct: 479  EIHEEID-SVKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLT 537

Query: 929  ESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSF---- 762
            ES HNV++FSIT ++G YRRVFQKPI+FEWELL Y+D N  L ETDLD + KSK      
Sbjct: 538  ESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVK 597

Query: 761  -IIEENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTTMKA 585
             +   N     + DC +++E   N++  +                  S+ GS +Q +  A
Sbjct: 598  QMGAANGKNEEAFDCIRELES-SNDVVKV-ENYSEIAGEEIKLPHDESLSGSSSQDSQIA 655

Query: 584  LKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 480
            LK+ FTLPASCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 656  LKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 690


>ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Cicer arietinum]
          Length = 698

 Score =  845 bits (2182), Expect = 0.0
 Identities = 438/701 (62%), Positives = 533/701 (76%), Gaps = 18/701 (2%)
 Frame = -1

Query: 2528 MKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEI----V 2361
            M + EE DVGI CYIS  PGFRGVLKQRYSDFIVNEVD DG V  L+SL+A  E     V
Sbjct: 1    MNSMEEHDVGISCYISNLPGFRGVLKQRYSDFIVNEVDIDGKVVELSSLEASAEESKVPV 60

Query: 2360 EDSKVEKETE--------ISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVL 2205
            ++SK  +E +        IS+ SQIESF+SL+G+SDA SL+ FI++IN G  +  SPI+L
Sbjct: 61   DESKSVQENKTNTSESEVISYASQIESFKSLAGESDASSLEEFINQINVGGEDSPSPIIL 120

Query: 2204 SPDSNKSHRTAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKER 2028
            SPDS+KSHRTAVH FF+ENFKFLVTDTVDGPD  SKCIRVRLNSGG N+KG N RKRK+R
Sbjct: 121  SPDSDKSHRTAVHVFFRENFKFLVTDTVDGPDASSKCIRVRLNSGGPNNKGKNSRKRKDR 180

Query: 2027 GERPYDSRGFDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRS 1848
              +P+DSRG ++WPE  GKFLRFHL+KENKDTQEALG++G MLGI+ RSFGFAGTKDKR+
Sbjct: 181  DNKPFDSRGSENWPENAGKFLRFHLFKENKDTQEALGVLGNMLGIKSRSFGFAGTKDKRA 240

Query: 1847 VSTQRVTVFKQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSD 1668
            V+TQRVTV+KQQA++LA+LNE+L GIKVG+FCYVNE        GNRFTITLRG+VA S 
Sbjct: 241  VTTQRVTVYKQQARKLASLNEKLFGIKVGDFCYVNEGLCLGQLLGNRFTITLRGIVADSV 300

Query: 1667 DTIKVAANSLGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDS 1488
            DTIK AA+SLG+ GFINYFGLQRFGS SVPTH IGAAL RGEWK AV++ILDPR+GER  
Sbjct: 301  DTIKAAADSLGRHGFINYFGLQRFGSGSVPTHRIGAALFRGEWKLAVDLILDPRDGERYV 360

Query: 1487 IREVREYYKESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHS 1308
            I + R+YYK++ D+ GT++QLP++LVAERA+L+ L++ PGNYLQALK+IPRTLRMMYVHS
Sbjct: 361  IAKARKYYKDTNDVAGTLKQLPQFLVAERAVLKSLKQFPGNYLQALKSIPRTLRMMYVHS 420

Query: 1307 YQSYLWNHAASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQ 1128
            YQSYLWNHAAS RVQK+G  +V LGDLVYCK     K  E V +EC+ D+C + YD   +
Sbjct: 421  YQSYLWNHAASTRVQKYGTEQVVLGDLVYCKENPPSKATEIVGSECD-DDCGDIYDSNIE 479

Query: 1127 DEILGMELLEGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKK 948
            DEI   ++ +  ++SVK V+A+DL    YTIDDV+LP+PGSR +YP ND+  VY+DL  K
Sbjct: 480  DEI-PEDIHDKSNSSVKAVNAEDLNSKSYTIDDVILPMPGSRSIYPANDIVKVYNDLTNK 538

Query: 947  DGISLTESAHNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSK 768
            DGISLTE+ HN KEFS+T ++G YRRVFQKPI+FEWELL YTD N PL ETDLD I KSK
Sbjct: 539  DGISLTENVHNAKEFSMTSVTGSYRRVFQKPINFEWELLTYTDSNKPLVETDLDKIGKSK 598

Query: 767  SFII-----EENNSKTLSVDCKKQVEGLQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDA 603
               +          +T + DC +QVE   ++   +                  S+  S +
Sbjct: 599  RTNVHAVGASNGQKETTAFDCIRQVES-SDDGVKVETDYDENASKEVILPHDESVPDSSS 657

Query: 602  QTTMKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 480
            + +  ALK+ FTLP+SCYATMAIRELLKTSTSV++ KTLNQ
Sbjct: 658  KDSHTALKLTFTLPSSCYATMAIRELLKTSTSVAYQKTLNQ 698


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Glycine max]
          Length = 687

 Score =  837 bits (2161), Expect = 0.0
 Identities = 437/698 (62%), Positives = 531/698 (76%), Gaps = 13/698 (1%)
 Frame = -1

Query: 2534 ISMKTPEEADVGIICYISQCPGFRGVLKQRYSDFIVNEVDCDGNVAHLTSLDAPPEIVED 2355
            ++MKT EE +VGI C+IS   GFRG+LKQRYSDFIVNEVD DG V  L+SLDAP E  E+
Sbjct: 1    MAMKTAEEHEVGISCFISDLRGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPLEEPEE 60

Query: 2354 SKVEK-ETEISHESQIESFRSLSGDSDAESLKSFIDRINSGAGEDASPIVLSPDSNKSHR 2178
            ++    +T +S+ SQIESF+SL+ + DA  L+ FI++IN+G  +  SPIVLSPDS+KSHR
Sbjct: 61   NRTNTHDTVVSYASQIESFKSLAEEYDAILLEEFINKINAGGEDSVSPIVLSPDSDKSHR 120

Query: 2177 TAVHNFFKENFKFLVTDTVDGPDVGSKCIRVRLNSGG-NDKGTNKRKRKERGERPYDSRG 2001
             A+HNFFKENFKFLVTD V+GPD  SKCIRVRLNS   N+KG N +KRKER ++P+DSRG
Sbjct: 121  KAMHNFFKENFKFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKKRKERDDKPFDSRG 180

Query: 2000 FDDWPEQVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRSVSTQRVTVF 1821
             ++WPE VGKFLRFHLYKENKDT EALG+IG ML IQ +SFGFAGTKDKR+V+TQRVTV+
Sbjct: 181  SENWPENVGKFLRFHLYKENKDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVY 240

Query: 1820 KQQAKRLAALNERLIGIKVGNFCYVNEXXXXXXXXGNRFTITLRGVVAKSDDTIKVAANS 1641
            KQQA RLA+LN+RL GIK+G+FCYV E        GNRFTITLRG+VA S+D IK +A++
Sbjct: 241  KQQASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADA 300

Query: 1640 LGKKGFINYFGLQRFGSASVPTHLIGAALLRGEWKAAVNMILDPREGERDSIREVREYYK 1461
            LG+ GFINYFGLQRFGS S+PTHLIGAALLRGEWK AV+MILDPR+GE+ +I + R+YYK
Sbjct: 301  LGRHGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYK 360

Query: 1460 ESCDIEGTIRQLPRYLVAERAILQCLRKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 1281
            ES D+ GT++QLPRYLVAERA+LQ L+  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHA
Sbjct: 361  ESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHA 420

Query: 1280 ASVRVQKHGISEVKLGDLVYCKGTSEQKPIEGVDTECEKDNCDEAYDCGDQDEILGMELL 1101
            AS RVQK+G   V LGDLVYCK  S  K  E V +E  +D C   YD  ++DE+ G   +
Sbjct: 421  ASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSEYAED-CRGRYDSNNEDEVSGE--I 477

Query: 1100 EGKDNSVKEVSADDLLGGDYTIDDVVLPLPGSRVLYPMNDVADVYHDLAKKDGISLTESA 921
              + NSVK + A+DL  G YTIDDV+LP+PGSRV YP N +A+VY DLAKKDGISLTES 
Sbjct: 478  HEEINSVKVIDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESV 537

Query: 920  HNVKEFSITRLSGGYRRVFQKPIDFEWELLQYTDGNVPLAETDLDIIAKSKSF-----II 756
            HNV++FSIT ++G YRRVFQKPI+FEWELL Y+D +  L +TDLD I KSK       + 
Sbjct: 538  HNVEDFSITSITGCYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMG 597

Query: 755  EENNSKTLSVDCKKQVEG------LQNEMTPLGXXXXXXXXXXXXXXXXXSICGSDAQTT 594
              N     + DC +++E       ++N    LG                 S+ GS +Q +
Sbjct: 598  AANGKNEEAFDCIRELESSDDIAKVENYSEILG--------EEVKLPHDESLIGSSSQDS 649

Query: 593  MKALKMGFTLPASCYATMAIRELLKTSTSVSFHKTLNQ 480
              ALK+ FTLPASCYATMAIRELLKTSTSV++HKTLNQ
Sbjct: 650  QIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ 687