BLASTX nr result
ID: Sinomenium22_contig00004256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00004256
(254 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28434.3| unnamed protein product [Vitis vinifera] 69 9e-10
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261... 69 9e-10
ref|XP_007146824.1| hypothetical protein PHAVU_006G072900g [Phas... 62 1e-07
ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Popu... 60 4e-07
ref|NP_851215.1| TBP-associated factor 15B [Arabidopsis thaliana... 60 4e-07
ref|XP_006281876.1| hypothetical protein CARUB_v10028073mg, part... 59 7e-07
gb|AFW80099.1| hypothetical protein ZEAMMB73_349753 [Zea mays] g... 56 6e-06
ref|XP_002457291.1| hypothetical protein SORBIDRAFT_03g005050 [S... 56 6e-06
ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medica... 55 1e-05
>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
Length = 873
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NY+MRGYKI+VAMAEKSAPRAPP++ PDRHHHG
Sbjct: 808 NYEMRGYKINVAMAEKSAPRAPPAF-GHGGGGRGGYGGGDRRRDNYRDNAGSGPDRHHHG 866
Query: 182 GNRSRPY 202
GNRSRPY
Sbjct: 867 GNRSRPY 873
>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
Length = 462
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NY+MRGYKI+VAMAEKSAPRAPP++ PDRHHHG
Sbjct: 397 NYEMRGYKINVAMAEKSAPRAPPAF-GHGGGGRGGYGGGDRRRDNYRDNAGSGPDRHHHG 455
Query: 182 GNRSRPY 202
GNRSRPY
Sbjct: 456 GNRSRPY 462
>ref|XP_007146824.1| hypothetical protein PHAVU_006G072900g [Phaseolus vulgaris]
gi|561020047|gb|ESW18818.1| hypothetical protein
PHAVU_006G072900g [Phaseolus vulgaris]
Length = 517
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NYD+RGYKISVAMAEKSAPRAPP+Y PDR H
Sbjct: 454 NYDLRGYKISVAMAEKSAPRAPPAY---NQGGNRGGYGGDRRRENYRDGGGSGPDRRDHY 510
Query: 182 GNRSRPY 202
GNRSRPY
Sbjct: 511 GNRSRPY 517
>ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Populus trichocarpa]
gi|550331275|gb|ERP56924.1| hypothetical protein
POPTR_0009s08040g [Populus trichocarpa]
Length = 443
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/67 (49%), Positives = 34/67 (50%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NYDMRGYKI+VAMAEKSAPR P PDRH HG
Sbjct: 382 NYDMRGYKINVAMAEKSAPRQP-----AHDHGGGRGGYGGGDRRNYRDAGNSGPDRHQHG 436
Query: 182 GNRSRPY 202
GNRSRPY
Sbjct: 437 GNRSRPY 443
>ref|NP_851215.1| TBP-associated factor 15B [Arabidopsis thaliana]
gi|30697077|ref|NP_568879.3| TBP-associated factor 15B
[Arabidopsis thaliana]
gi|75332298|sp|Q94KD0.1|TA15B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 15b;
AltName: Full=TBP-associated factor 15b; Short=AtTAF15b
gi|14194175|gb|AAK56282.1|AF367294_1 AT5g58470/mqj2_60
[Arabidopsis thaliana] gi|18700145|gb|AAL77684.1|
AT5g58470/mqj2_60 [Arabidopsis thaliana]
gi|222423096|dbj|BAH19528.1| AT5G58470 [Arabidopsis
thaliana] gi|332009673|gb|AED97056.1| TBP-associated
factor 15B [Arabidopsis thaliana]
gi|332009674|gb|AED97057.1| TBP-associated factor 15B
[Arabidopsis thaliana]
Length = 422
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/67 (47%), Positives = 34/67 (50%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NY+MRG KISV MAEKSAPRAP PDR+HHG
Sbjct: 356 NYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNYSSGPDRNHHG 415
Query: 182 GNRSRPY 202
GNRSRPY
Sbjct: 416 GNRSRPY 422
>ref|XP_006281876.1| hypothetical protein CARUB_v10028073mg, partial [Capsella rubella]
gi|482550580|gb|EOA14774.1| hypothetical protein
CARUB_v10028073mg, partial [Capsella rubella]
Length = 918
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/67 (47%), Positives = 36/67 (53%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NY+MRG KISV MAEKSAPRA P++ PDR+HHG
Sbjct: 853 NYEMRGSKISVTMAEKSAPRA-PTFDQRGGGRGGGGGYGGGGGDRRRDNYGSGPDRNHHG 911
Query: 182 GNRSRPY 202
GNRSRPY
Sbjct: 912 GNRSRPY 918
>gb|AFW80099.1| hypothetical protein ZEAMMB73_349753 [Zea mays]
gi|413947451|gb|AFW80100.1| hypothetical protein
ZEAMMB73_349753 [Zea mays]
Length = 489
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/67 (47%), Positives = 35/67 (52%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NYDMRGYKISV MAEKSAPRA PSY P+R+ G
Sbjct: 425 NYDMRGYKISVVMAEKSAPRAAPSY--GHGGGRGGGRGGGGRRDNYRDGGGHGPNRNQGG 482
Query: 182 GNRSRPY 202
G+RSRPY
Sbjct: 483 GSRSRPY 489
>ref|XP_002457291.1| hypothetical protein SORBIDRAFT_03g005050 [Sorghum bicolor]
gi|241929266|gb|EES02411.1| hypothetical protein
SORBIDRAFT_03g005050 [Sorghum bicolor]
Length = 189
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/67 (47%), Positives = 35/67 (52%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 181
NYDMRGYKISV MAEKSAPRA PSY P+R+ G
Sbjct: 125 NYDMRGYKISVVMAEKSAPRAAPSY--GHGGGRGGGYGGGGRRDSYRDGGGHGPNRNQGG 182
Query: 182 GNRSRPY 202
G+RSRPY
Sbjct: 183 GSRSRPY 189
>ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medicago truncatula]
gi|355488380|gb|AES69583.1| HIV Tat-specific factor-like
protein [Medicago truncatula]
Length = 473
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/68 (47%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 NYDMRGYKISVAMAEKSAPRAPPSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRH-HH 178
+YD+RGYKI VAMAEKSAPRAPP+ PDR H+
Sbjct: 415 DYDLRGYKIGVAMAEKSAPRAPPA---------NNHGGNRGGYGGDRRRDNSGPDRRDHY 465
Query: 179 GGNRSRPY 202
GGNRSRPY
Sbjct: 466 GGNRSRPY 473