BLASTX nr result
ID: Sinomenium21_contig00050425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00050425
(547 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 72 2e-31
emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera] 72 2e-31
emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera] 73 3e-31
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 69 5e-31
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The... 69 5e-31
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par... 69 5e-31
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 68 1e-30
gb|AAP43919.1| integrase [Gossypium hirsutum] 69 2e-30
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 67 2e-30
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 67 6e-30
ref|XP_007203327.1| hypothetical protein PRUPE_ppa020104mg, part... 67 8e-30
ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prun... 66 2e-29
ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The... 67 3e-29
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja... 60 8e-29
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 60 8e-29
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap... 60 8e-29
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 67 1e-28
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 62 2e-28
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 60 4e-28
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 60 4e-28
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 71.6 bits (174), Expect(4) = 2e-31
Identities = 36/69 (52%), Positives = 43/69 (62%)
Frame = -1
Query: 208 RPIYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGL 29
+ +Y ND F I++ C AFG Y DGFLF +LCIP+SSLRE + E H GGL
Sbjct: 1339 KSLYANDSDFEKIYSSC--EKFAFGKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGL 1396
Query: 28 AGHFGVIKT 2
GHFGV KT
Sbjct: 1397 MGHFGVSKT 1405
Score = 63.5 bits (153), Expect(4) = 2e-31
Identities = 26/65 (40%), Positives = 45/65 (69%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+++ QQK++ RHA+W F++ + + ++++ GKDN+V DALSR+ LL +L L GF
Sbjct: 1278 KHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEH 1337
Query: 213 LRDLY 199
++ LY
Sbjct: 1338 IKSLY 1342
Score = 46.2 bits (108), Expect(4) = 2e-31
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
G LNY YD LY++V+AL+ +HY KEFVI +DHE+L+ +
Sbjct: 1237 GATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHL 1280
Score = 20.8 bits (42), Expect(4) = 2e-31
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
P+A+FS+KL G
Sbjct: 1227 PIAYFSEKLGG 1237
>emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]
Length = 611
Score = 72.4 bits (176), Expect(3) = 2e-31
Identities = 31/66 (46%), Positives = 48/66 (72%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+++NSQQK++ RHAKW A+LQ YTF L+++AG N V DAL R+ +LL T+ S+ G
Sbjct: 369 KFLNSQQKLNHRHAKWVAYLQKYTFTLRYKAGSQNRVADALCRRVYLLQTMTNSVVGLEA 428
Query: 213 LRDLYI 196
+++ Y+
Sbjct: 429 IKEQYM 434
Score = 56.2 bits (134), Expect(3) = 2e-31
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = -1
Query: 145 GAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGHFGVIKT 2
G + DG+LF+G +LCIP SL+E ++ E+H GGL GHFG KT
Sbjct: 452 GVLAELVFNDGYLFKGVRLCIPEGSLKELLIGELHGGGLGGHFGRNKT 499
Score = 53.1 bits (126), Expect(3) = 2e-31
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = -3
Query: 506 NYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALR 393
NYS YD+ Y++VQAL+ RHY IQ+EF++ SDHEAL+
Sbjct: 332 NYSNYDVEFYAIVQALKFWRHYLIQREFILHSDHEALK 369
>emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]
Length = 337
Score = 72.8 bits (177), Expect(3) = 3e-31
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = -1
Query: 208 RPIYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGL 29
+ +Y ND+ F S++ C AFG + LDG+LFR +LC+P+SS+ E I+ E H GGL
Sbjct: 117 KELYANDDDFASVYGAC--EKVAFGKFYRLDGYLFRDNRLCVPNSSMPELIVREAHRGGL 174
Query: 28 AGHFGVIKT 2
GHFGV KT
Sbjct: 175 MGHFGVRKT 183
Score = 62.4 bits (150), Expect(3) = 3e-31
Identities = 25/65 (38%), Positives = 46/65 (70%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+++ Q K++ RHAKW F++ +++ ++++ GK+N+V DALSR+ L+ TL L GF
Sbjct: 56 KHLKGQGKLNRRHAKWVEFIETFSYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEY 115
Query: 213 LRDLY 199
+++LY
Sbjct: 116 VKELY 120
Score = 46.6 bits (109), Expect(3) = 3e-31
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
G LNY YD LY++V+AL +HY KEFVI +DHE+L+ +
Sbjct: 15 GATLNYPTYDKELYALVRALETWQHYLWTKEFVIHTDHESLKHL 58
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 68.6 bits (166), Expect(3) = 5e-31
Identities = 29/65 (44%), Positives = 48/65 (73%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
RY++SQ+K+S++HAKW +FL + F L++++G+ N V DALSR+ +L + T + GF E
Sbjct: 908 RYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEE 967
Query: 213 LRDLY 199
L++ Y
Sbjct: 968 LKNQY 972
Score = 63.9 bits (154), Expect(3) = 5e-31
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFG-NYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAG 23
Y +D YF I AD A Y L + +LF+G QLCIP SLREQI+ E+H GL G
Sbjct: 972 YSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGG 1031
Query: 22 HFGVIKT 2
HFG KT
Sbjct: 1032 HFGRDKT 1038
Score = 48.1 bits (113), Expect(3) = 5e-31
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALR 393
YS YDL Y++V+A+RH +HY +EF + SDH+ALR
Sbjct: 872 YSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALR 908
>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 786
Score = 68.6 bits (166), Expect(3) = 5e-31
Identities = 29/65 (44%), Positives = 48/65 (73%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
RY++SQ+K+S++HAKW +FL + F L++++G+ N V DALSR+ +L + T + GF E
Sbjct: 360 RYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEE 419
Query: 213 LRDLY 199
L++ Y
Sbjct: 420 LKNQY 424
Score = 63.9 bits (154), Expect(3) = 5e-31
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFG-NYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAG 23
Y +D YF I AD A Y L + +LF+G QLCIP SLREQI+ E+H GL G
Sbjct: 424 YSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGG 483
Query: 22 HFGVIKT 2
HFG KT
Sbjct: 484 HFGRDKT 490
Score = 48.1 bits (113), Expect(3) = 5e-31
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALR 393
YS YDL Y++V+A+RH +HY +EF + SDH+ALR
Sbjct: 324 YSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALR 360
>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
superfamily protein, partial [Theobroma cacao]
Length = 624
Score = 68.6 bits (166), Expect(3) = 5e-31
Identities = 29/65 (44%), Positives = 48/65 (73%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
RY++SQ+K+S++HAKW +FL + F L++++G+ N V DALSR+ +L + T + GF E
Sbjct: 360 RYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEE 419
Query: 213 LRDLY 199
L++ Y
Sbjct: 420 LKNQY 424
Score = 63.9 bits (154), Expect(3) = 5e-31
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFG-NYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAG 23
Y +D YF I AD A Y L + +LF+G QLCIP SLREQI+ E+H GL G
Sbjct: 424 YSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGG 483
Query: 22 HFGVIKT 2
HFG KT
Sbjct: 484 HFGRDKT 490
Score = 48.1 bits (113), Expect(3) = 5e-31
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALR 393
YS YDL Y++V+A+RH +HY +EF + SDH+ALR
Sbjct: 324 YSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALR 360
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 67.8 bits (164), Expect(4) = 1e-30
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+YIN Q K++ RHAKW FLQ +TF +++ GK N+V DALSR+ LL + + GF
Sbjct: 983 KYINGQHKLNFRHAKWVEFLQSFTFSSKYKEGKKNVVADALSRRHSLLSVMSNRVLGFEF 1042
Query: 213 LRDLY 199
+++LY
Sbjct: 1043 MKELY 1047
Score = 60.8 bits (146), Expect(4) = 1e-30
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -1
Query: 151 HHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGHFGVIKT 2
H YLL +GFLF+G +LC+P S R+ ++ E+H+GG+ GHFGV KT
Sbjct: 1064 HKNQGSKYLLQEGFLFQGNKLCVPRGSYRDLLIREVHSGGMGGHFGVQKT 1113
Score = 48.5 bits (114), Expect(4) = 1e-30
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
G KL YS YD Y++++AL H HY K FV+ SDHEAL+ I
Sbjct: 942 GAKLKYSTYDKEFYAIIRALMHWNHYLKPKPFVLHSDHEALKYI 985
Score = 21.9 bits (45), Expect(4) = 1e-30
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 932 PVAYFSEKLNG 942
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 68.9 bits (167), Expect(3) = 2e-30
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = -1
Query: 208 RPIYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGL 29
+ +Y +D F I+ +C H AF + L+DG LFR +LCIP S+RE ++ E H+GGL
Sbjct: 118 KELYDDDTDFSHIYKNC--GHTAFEKFYLVDGLLFRLNRLCIPKCSMRELLIHEAHSGGL 175
Query: 28 AGHFGVIKT 2
GHFGV KT
Sbjct: 176 MGHFGVAKT 184
Score = 64.3 bits (155), Expect(3) = 2e-30
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+++ Q K+S RHA+W F++ + + +Q++ G DN+V DALSR+ L+ TL + GF
Sbjct: 57 KWLKGQGKLSKRHARWVEFIETFPYMIQYKIGNDNVVADALSRRYTLITTLNAKVLGFEH 116
Query: 213 LRDLY 199
+++LY
Sbjct: 117 IKELY 121
Score = 45.8 bits (107), Expect(3) = 2e-30
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALR 393
G +LNYS YD L ++V+AL+ +HY + EFVI +DHE+L+
Sbjct: 16 GAQLNYSTYDKELLALVRALQVWQHYLLPNEFVIHTDHESLK 57
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 67.0 bits (162), Expect(4) = 2e-30
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+YINSQ+ + HA+W FLQ ++F ++ +GK N V DALSR+ LL+TL + GF
Sbjct: 993 KYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGFEC 1052
Query: 213 LRDLY 199
L++LY
Sbjct: 1053 LKELY 1057
Score = 67.0 bits (162), Expect(4) = 2e-30
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 208 RPIYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGL 29
+ +Y D FG I C + +Y L +G+LF+G QLCIP SSLRE+++ ++H GGL
Sbjct: 1054 KELYEGDADFGEIWTKC-TNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGL 1112
Query: 28 AGHFGVIKT 2
+GH G KT
Sbjct: 1113 SGHLGRDKT 1121
Score = 43.9 bits (102), Expect(4) = 2e-30
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
+S YD Y++V+AL+ HY IQKEFV+ +DH+AL+ I
Sbjct: 957 WSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYI 995
Score = 20.8 bits (42), Expect(4) = 2e-30
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 547 PVAFFSQKL 521
PVAFFS+KL
Sbjct: 942 PVAFFSEKL 950
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 67.0 bits (162), Expect(4) = 6e-30
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+YINSQ+ + HA+W FLQ ++F ++ +GK N V DALSR+ LL+TL + GF
Sbjct: 1001 KYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGFEC 1060
Query: 213 LRDLY 199
L++LY
Sbjct: 1061 LKELY 1065
Score = 65.1 bits (157), Expect(4) = 6e-30
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = -1
Query: 208 RPIYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGL 29
+ +Y D+ F I C + +Y L +G+LF+G QLCIP SSLRE+++ ++H GGL
Sbjct: 1062 KELYEGDDDFREIWTKC-TNQEPMTDYFLTEGYLFKGNQLCIPVSSLREKLIRDLHGGGL 1120
Query: 28 AGHFGVIKT 2
+GH G KT
Sbjct: 1121 SGHLGRDKT 1129
Score = 43.9 bits (102), Expect(4) = 6e-30
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
+S YD Y++V+AL+ HY IQKEFV+ +DH+AL+ I
Sbjct: 965 WSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYI 1003
Score = 20.8 bits (42), Expect(4) = 6e-30
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 547 PVAFFSQKL 521
PVAFFS+KL
Sbjct: 950 PVAFFSEKL 958
>ref|XP_007203327.1| hypothetical protein PRUPE_ppa020104mg, partial [Prunus persica]
gi|462398858|gb|EMJ04526.1| hypothetical protein
PRUPE_ppa020104mg, partial [Prunus persica]
Length = 428
Score = 67.0 bits (162), Expect(4) = 8e-30
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = -1
Query: 202 IYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAG 23
+Y D+ FG I ++C+ ++ +Y + DG+LF+G +LCIP SLR I+ E H GGL G
Sbjct: 350 LYKGDKEFGEIWSECVQNNSV-QDYHIQDGYLFKGSKLCIPDCSLRLWIIEEQHGGGLGG 408
Query: 22 HFGVIKT 2
HFG KT
Sbjct: 409 HFGRAKT 415
Score = 60.8 bits (146), Expect(4) = 8e-30
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
R+IN Q K++ RHA+W LQ Y F ++ +AG N V DALSR+ LL ++ + GF +
Sbjct: 287 RFINGQHKLNRRHARWVEELQEYNFVIKHKAGIHNKVADALSRKVALLSVMQIRVEGFEQ 346
Query: 213 LRDLY 199
L++LY
Sbjct: 347 LQELY 351
Score = 47.8 bits (112), Expect(4) = 8e-30
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
YS YD+ Y+++Q+LR R Y I KEF++ SDHEALR I
Sbjct: 251 YSTYDIEFYAIMQSLRQWRQYLIYKEFILYSDHEALRFI 289
Score = 20.8 bits (42), Expect(4) = 8e-30
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 547 PVAFFSQKL 521
PVAFFS+KL
Sbjct: 236 PVAFFSEKL 244
>ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
gi|462416846|gb|EMJ21583.1| hypothetical protein
PRUPE_ppa021778mg [Prunus persica]
Length = 1384
Score = 66.2 bits (160), Expect(4) = 2e-29
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+YINSQ+ + HA+W FLQ ++F ++ +GK N V DALSR+ +L+TL + GF
Sbjct: 918 KYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASMLITLTQEVVGFEC 977
Query: 213 LRDLY 199
L++LY
Sbjct: 978 LKELY 982
Score = 63.9 bits (154), Expect(4) = 2e-29
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -1
Query: 208 RPIYPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGL 29
+ +Y D F I C + +Y L +G+LF+G QLCIP SSLRE+++ ++H GGL
Sbjct: 979 KELYEGDADFREIWTKC-TNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIQDLHGGGL 1037
Query: 28 AGHFGVIKT 2
+GH G KT
Sbjct: 1038 SGHLGRDKT 1046
Score = 43.9 bits (102), Expect(4) = 2e-29
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
+S YD Y++V+AL+ HY IQKEFV+ +DH+AL+ I
Sbjct: 882 WSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYI 920
Score = 20.8 bits (42), Expect(4) = 2e-29
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 547 PVAFFSQKL 521
PVAFFS+KL
Sbjct: 867 PVAFFSEKL 875
>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 647
Score = 67.4 bits (163), Expect(3) = 3e-29
Identities = 29/65 (44%), Positives = 47/65 (72%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
RY++SQ+K+S++HAKW FL + F L++++G+ N V DALSR+ +L + T + GF E
Sbjct: 176 RYLHSQKKLSNQHAKWSFFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEE 235
Query: 213 LRDLY 199
L++ Y
Sbjct: 236 LKNQY 240
Score = 61.2 bits (147), Expect(3) = 3e-29
Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGN--YLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLA 26
Y +D YF I AD A GN Y L + +LF+G QLCI SLREQI+ E+H GL
Sbjct: 240 YSSDSYFSKIIADLQGSLQA-GNLPYRLHEDYLFKGNQLCILEGSLREQIIGELHGNGLG 298
Query: 25 GHFGVIKT 2
GHFG KT
Sbjct: 299 GHFGRDKT 306
Score = 46.2 bits (108), Expect(3) = 3e-29
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -3
Query: 503 YSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALR 393
YS YDL Y++V+A+RH +HY EF + SDH+ALR
Sbjct: 140 YSTYDLEFYALVRAIRHWQHYLAYCEFAVYSDHQALR 176
>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1450
Score = 60.1 bits (144), Expect(4) = 8e-29
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGH 20
Y +D+ F + +C + ++L +GF+FR +LCIP+SS+R ++ E H GGL GH
Sbjct: 1085 YAHDDDFKDVLLNCKEGR-TWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGH 1143
Query: 19 FGVIKT 2
FGV KT
Sbjct: 1144 FGVKKT 1149
Score = 57.4 bits (137), Expect(4) = 8e-29
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
++I SQ K++ RHAKW F++ + + ++ + GK+N++ DALSR+ +L L +FG
Sbjct: 1021 KHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLET 1080
Query: 213 LRDLY 199
+++ Y
Sbjct: 1081 IKEQY 1085
Score = 53.5 bits (127), Expect(4) = 8e-29
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
GP LNYS YD L+++VQ L +HY KEFVI+SDHE+L+ I
Sbjct: 980 GPSLNYSTYDKKLFALVQTLETWQHYLWPKEFVIRSDHESLKHI 1023
Score = 21.9 bits (45), Expect(4) = 8e-29
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 970 PVAYFSEKLSG 980
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 60.1 bits (144), Expect(4) = 8e-29
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGH 20
Y +D+ F + +C + ++L +GF+FR +LCIP+SS+R ++ E H GGL GH
Sbjct: 1027 YAHDDDFKDVLLNCKEGR-TWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGH 1085
Query: 19 FGVIKT 2
FGV KT
Sbjct: 1086 FGVKKT 1091
Score = 57.4 bits (137), Expect(4) = 8e-29
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
++I SQ K++ RHAKW F++ + + ++ + GK+N++ DALSR+ +L L +FG
Sbjct: 963 KHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLET 1022
Query: 213 LRDLY 199
+++ Y
Sbjct: 1023 IKEQY 1027
Score = 53.5 bits (127), Expect(4) = 8e-29
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
GP LNYS YD L+++VQ L +HY KEFVI+SDHE+L+ I
Sbjct: 922 GPSLNYSTYDKKLFALVQTLETWQHYLWPKEFVIRSDHESLKHI 965
Score = 21.9 bits (45), Expect(4) = 8e-29
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 912 PVAYFSEKLSG 922
>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
Length = 1357
Score = 60.1 bits (144), Expect(4) = 8e-29
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGH 20
Y +D+ F + +C + ++L +GF+FR +LCIP+SS+R ++ E H GGL GH
Sbjct: 992 YAHDDDFKDVLLNCKEGR-TWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGH 1050
Query: 19 FGVIKT 2
FGV KT
Sbjct: 1051 FGVKKT 1056
Score = 57.4 bits (137), Expect(4) = 8e-29
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
++I SQ K++ RHAKW F++ + + ++ + GK+N++ DALSR+ +L L +FG
Sbjct: 928 KHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLET 987
Query: 213 LRDLY 199
+++ Y
Sbjct: 988 IKEQY 992
Score = 53.5 bits (127), Expect(4) = 8e-29
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
GP LNYS YD L+++VQ L +HY KEFVI+SDHE+L+ I
Sbjct: 887 GPSLNYSTYDKKLFALVQTLETWQHYLWPKEFVIRSDHESLKHI 930
Score = 21.9 bits (45), Expect(4) = 8e-29
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 877 PVAYFSEKLSG 887
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 67.4 bits (163), Expect(4) = 1e-28
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
+YIN Q K++ RHAKW FLQ + F ++ GKDN+V DALSR+ +L + + GF
Sbjct: 971 KYINGQHKLNHRHAKWVEFLQSFNFSSKYIEGKDNIVADALSRRFIMLSFMEQRVLGFEY 1030
Query: 213 LRDLYI 196
+++LY+
Sbjct: 1031 MKELYV 1036
Score = 53.5 bits (127), Expect(4) = 1e-28
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1
Query: 130 YLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGHFGVIKT 2
YL+ +GFLF G +LC+P R ++ E+H+ GLAGHFG+ KT
Sbjct: 1059 YLVQNGFLFFGNKLCVPRGPYRNLLIREVHSNGLAGHFGIQKT 1101
Score = 50.1 bits (118), Expect(4) = 1e-28
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
G KLNYS YD Y++V+AL H HY + FV+ SDHEAL+ I
Sbjct: 930 GAKLNYSTYDKEFYAIVRALNHWSHYLKPRPFVLHSDHEALKYI 973
Score = 21.6 bits (44), Expect(4) = 1e-28
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
P+A+FS+KL G
Sbjct: 920 PIAYFSEKLSG 930
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 61.6 bits (148), Expect(4) = 2e-28
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGH 20
Y +D+ F + +C+ + ++L +GF+FR +LCIP+SS+R ++ E H GGL GH
Sbjct: 491 YAHDDDFKDVLLNCMEGR-TWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGH 549
Query: 19 FGVIKT 2
FGV KT
Sbjct: 550 FGVKKT 555
Score = 57.0 bits (136), Expect(4) = 2e-28
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
++I SQ K++ RHAKW F++ + + ++ + GK+N++ DALSR+ +L L +FG
Sbjct: 427 KHIRSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLET 486
Query: 213 LRDLY 199
+++ Y
Sbjct: 487 IKEQY 491
Score = 50.8 bits (120), Expect(4) = 2e-28
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
GP LNYS YD L+++V+ L +HY KEFVI SDHE+L+ I
Sbjct: 386 GPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHI 429
Score = 21.9 bits (45), Expect(4) = 2e-28
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 376 PVAYFSEKLSG 386
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 60.1 bits (144), Expect(4) = 4e-28
Identities = 25/65 (38%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
++I SQ K++ RHAKW F++ + + ++ + GK+N++ DALSR+ LL L +FG
Sbjct: 1086 KHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLET 1145
Query: 213 LRDLY 199
++D Y
Sbjct: 1146 IKDQY 1150
Score = 57.0 bits (136), Expect(4) = 4e-28
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGH 20
Y +D F + C + +++ DGF+FR +LCIP+SS+R ++ E H GGL GH
Sbjct: 1150 YAHDADFNDVLLHCKDGR-TWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGH 1208
Query: 19 FGVIKT 2
FG KT
Sbjct: 1209 FGAKKT 1214
Score = 51.6 bits (122), Expect(4) = 4e-28
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
GP LNYS YD LY++V+ L +HY KEFVI SDHE+L+ I
Sbjct: 1045 GPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHI 1088
Score = 21.9 bits (45), Expect(4) = 4e-28
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 1035 PVAYFSEKLSG 1045
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 60.1 bits (144), Expect(4) = 4e-28
Identities = 25/65 (38%), Positives = 43/65 (66%)
Frame = -2
Query: 393 RYINSQQKVSDRHAKWFAFLQGYTFHLQFQAGKDNLVVDALSRQTHLLVTLRTSLFGFNE 214
++I SQ K++ RHAKW F++ + + ++ + GK+N++ DALSR+ LL L +FG
Sbjct: 1180 KHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLET 1239
Query: 213 LRDLY 199
++D Y
Sbjct: 1240 IKDQY 1244
Score = 57.0 bits (136), Expect(4) = 4e-28
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = -1
Query: 199 YPNDEYFGSIHADCLAHHGAFGNYLLLDGFLFRGQQLCIPSSSLREQIMTEMHAGGLAGH 20
Y +D F + C + +++ DGF+FR +LCIP+SS+R ++ E H GGL GH
Sbjct: 1244 YAHDADFNDVLLHCKDGR-TWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGH 1302
Query: 19 FGVIKT 2
FG KT
Sbjct: 1303 FGAKKT 1308
Score = 51.6 bits (122), Expect(4) = 4e-28
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -3
Query: 518 GPKLNYSMYDL*LYSMVQALRHLRHYHIQKEFVIKSDHEALRDI 387
GP LNYS YD LY++V+ L +HY KEFVI SDHE+L+ I
Sbjct: 1139 GPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHI 1182
Score = 21.9 bits (45), Expect(4) = 4e-28
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 547 PVAFFSQKLEG 515
PVA+FS+KL G
Sbjct: 1129 PVAYFSEKLSG 1139