BLASTX nr result

ID: Scutellaria24_contig00026550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026550
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communi...   105   3e-21
ref|XP_004143283.1| PREDICTED: WD repeat-containing protein 3-li...    96   2e-18
ref|XP_002266326.1| PREDICTED: WD repeat-containing protein 3 [V...    94   9e-18
emb|CAN63880.1| hypothetical protein VITISV_032251 [Vitis vinifera]    94   9e-18
ref|XP_002885447.1| transducin family protein [Arabidopsis lyrat...    87   1e-15

>ref|XP_002519449.1| WD-repeat protein, putative [Ricinus communis]
           gi|223541312|gb|EEF42863.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 950

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +2

Query: 5   NGNAPAHNKWEVLKHFGDIQRQNKDRVSTVRFSKSGNLLACQVAGTMVEIFRVLDETESX 184
           NG +   NKWE+LK FG+IQRQNKDRV+TVRF+KSGNLLACQVAG  V+IFRVLDE E+ 
Sbjct: 246 NGASSTQNKWEILKLFGEIQRQNKDRVATVRFNKSGNLLACQVAGKTVDIFRVLDENEAK 305

Query: 185 XXXXXXXXXXXXXTS-KGKTEITENGNIKVEAEERNDFL-VTVTDV 316
                         S KG+ E+ EN ++K+  +E    L VTV+DV
Sbjct: 306 RKAKRRLHRKKEKKSAKGEVEVAENKDVKLVTDEDGAALVVTVSDV 351


>ref|XP_004143283.1| PREDICTED: WD repeat-containing protein 3-like [Cucumis sativus]
          Length = 941

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = +2

Query: 26  NKWEVLKHFGDIQRQNKDRVSTVRFSKSGNLLACQVAGTMVEIFRVLDETES-XXXXXXX 202
           +KWEVLK FG+I RQ+KDRV+TVRF+KSGNLLACQVAG  VE+F VLDETE+        
Sbjct: 246 SKWEVLKQFGEITRQSKDRVATVRFNKSGNLLACQVAGKTVELFNVLDETEAKRKAKRRI 305

Query: 203 XXXXXXXTSKGKTEITENGNIK-VEAEERNDFLVTVTDV 316
                    KG+ ++TENG       EE +  ++TV DV
Sbjct: 306 NRKKGKKAGKGEQDVTENGESNHTTGEEGSGSMITVADV 344


>ref|XP_002266326.1| PREDICTED: WD repeat-containing protein 3 [Vitis vinifera]
          Length = 952

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   DNGNAPAHNKWEVLKHFGDIQRQNKDRVSTVRFSKSGNLLACQVAGTMVEIFRVLDETES 181
           D+G++   +KWEVLK FG+IQRQ+KDRV+TVRF+KSG+LLACQVAG +VEI RVLDE+ES
Sbjct: 239 DSGDSSVQSKWEVLKLFGEIQRQSKDRVATVRFNKSGHLLACQVAGKIVEILRVLDESES 298

Query: 182 XXXXXXXXXXXXXXTS-KGKTEITENGNIK-VEAEERNDFLVTVTDV 316
                          S K   ++T +G++  ++ EE     VTV+DV
Sbjct: 299 KRKAKRRIHRKKEKKSIKEVADVTLDGDVNLLKGEESFIPTVTVSDV 345


>emb|CAN63880.1| hypothetical protein VITISV_032251 [Vitis vinifera]
          Length = 724

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   DNGNAPAHNKWEVLKHFGDIQRQNKDRVSTVRFSKSGNLLACQVAGTMVEIFRVLDETES 181
           D+G++   +KWEVLK FG+IQRQ+KDRV+TVRF+KSG+LLACQVAG +VEI RVLDE+ES
Sbjct: 239 DSGDSSVQSKWEVLKLFGEIQRQSKDRVATVRFNKSGHLLACQVAGKIVEILRVLDESES 298

Query: 182 XXXXXXXXXXXXXXTS-KGKTEITENGNIK-VEAEERNDFLVTVTDV 316
                          S K   ++T +G++  ++ EE     VTV+DV
Sbjct: 299 KRKAKRRIHRKKEKKSIKEVADVTLDGDVNLLKGEESFIPTVTVSDV 345


>ref|XP_002885447.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331287|gb|EFH61706.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 954

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/87 (52%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 26  NKWEVLKHFGDIQRQNKDRVSTVRFSKSGNLLACQVAGTMVEIFRVLDETESXXXXXXXX 205
           NKWE+LK FG+IQRQ KDRV+ VRF+ SG LLACQ+AG  VEIFRVLDE E+        
Sbjct: 247 NKWEILKPFGEIQRQTKDRVARVRFNVSGKLLACQMAGKTVEIFRVLDEAEAKKKAKRRL 306

Query: 206 XXXXXXTSK-GKTEITENGNIKVEAEE 283
                 TSK G   +T NG    + E+
Sbjct: 307 HRKEKKTSKVGDENLTANGEASTKIEQ 333


Top