BLASTX nr result

ID: Scutellaria24_contig00021038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021038
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   156   1e-36
ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   156   1e-36
emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]   156   1e-36
ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ric...   156   2e-36
ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36

>ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 1 [Vitis vinifera]
           gi|297744598|emb|CBI37860.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/84 (88%), Positives = 79/84 (94%)
 Frame = -3

Query: 256 LRMKMNEARKANQTAMVAEKKKLEAPGESRGISKQKWLEERKKKIGKLLDANGLDMSKAY 77
           LR+KMNEARKANQTAMVAEKKK+EAP ESRGISKQKW+EERKKKIGKLLD NGLDM KAY
Sbjct: 108 LRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAY 167

Query: 76  MLDTQDMAELKYKKWEKEPAPTGW 5
           MLDTQ+MAE KYKKWEK+PAP GW
Sbjct: 168 MLDTQEMAETKYKKWEKDPAPFGW 191


>ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 2 [Vitis vinifera]
          Length = 295

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/84 (88%), Positives = 79/84 (94%)
 Frame = -3

Query: 256 LRMKMNEARKANQTAMVAEKKKLEAPGESRGISKQKWLEERKKKIGKLLDANGLDMSKAY 77
           LR+KMNEARKANQTAMVAEKKK+EAP ESRGISKQKW+EERKKKIGKLLD NGLDM KAY
Sbjct: 90  LRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAY 149

Query: 76  MLDTQDMAELKYKKWEKEPAPTGW 5
           MLDTQ+MAE KYKKWEK+PAP GW
Sbjct: 150 MLDTQEMAETKYKKWEKDPAPFGW 173


>emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]
          Length = 295

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/84 (88%), Positives = 79/84 (94%)
 Frame = -3

Query: 256 LRMKMNEARKANQTAMVAEKKKLEAPGESRGISKQKWLEERKKKIGKLLDANGLDMSKAY 77
           LR+KMNEARKANQTAMVAEKKK+EAP ESRGISKQKW+EERKKKIGKLLD NGLDM KAY
Sbjct: 90  LRLKMNEARKANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAY 149

Query: 76  MLDTQDMAELKYKKWEKEPAPTGW 5
           MLDTQ+MAE KYKKWEK+PAP GW
Sbjct: 150 MLDTQEMAETKYKKWEKDPAPFGW 173


>ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ricinus communis]
           gi|223539559|gb|EEF41147.1| Pre-mRNA-splicing factor
           syf2, putative [Ricinus communis]
          Length = 308

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = -3

Query: 256 LRMKMNEARKANQTAMVAEKKKLEAPGESRGISKQKWLEERKKKIGKLLDANGLDMSKAY 77
           LR+KMNEARKANQTAMVAEKKK+EAP ESRGISKQKWLEERKKKIGKLLDANGLDM+KAY
Sbjct: 103 LRLKMNEARKANQTAMVAEKKKMEAPQESRGISKQKWLEERKKKIGKLLDANGLDMTKAY 162

Query: 76  MLDTQDMAELKYKKWEKEPAPTGW 5
           MLDTQ+ AE+KYKKWEK PAP GW
Sbjct: 163 MLDTQEAAEVKYKKWEKGPAPFGW 186


>ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|222848492|gb|EEE86039.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/84 (86%), Positives = 81/84 (96%)
 Frame = -3

Query: 256 LRMKMNEARKANQTAMVAEKKKLEAPGESRGISKQKWLEERKKKIGKLLDANGLDMSKAY 77
           LR+KMNEARKANQTAMV+EKKK+EAP ESRGISKQKWLE+RKKKIGKLLDANGLDM+KAY
Sbjct: 103 LRLKMNEARKANQTAMVSEKKKMEAPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAY 162

Query: 76  MLDTQDMAELKYKKWEKEPAPTGW 5
           MLDTQ+ AE+KYKKWEK+PAP GW
Sbjct: 163 MLDTQEAAEVKYKKWEKDPAPFGW 186


Top