BLASTX nr result

ID: Scutellaria23_contig00019041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019041
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299821.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002314118.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002299821.1| predicted protein [Populus trichocarpa] gi|222847079|gb|EEE84626.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
 Frame = -1

Query: 259 AVSSNNGNRSKG---CTRSCDFG--RWEFISPVRYLKHVGGKVAALVVRMAAPPRNKNQP 95
           ++  N+GNR  G     RS  F   +   +SP  +LKH+GGKVA  +     P    +  
Sbjct: 28  SIRRNSGNRVSGNRWLGRSYGFRLLKRSIMSPAVFLKHLGGKVAKALRLERRPSPGVSSS 87

Query: 94  SPKTTSVAPLDSQRAEAIHDCIDFINSSSSS 2
                SVAP+D+ RAEAI DCI+FINS+S S
Sbjct: 88  GRSRPSVAPIDAHRAEAIEDCIEFINSASLS 118


>ref|XP_002314118.1| predicted protein [Populus trichocarpa] gi|222850526|gb|EEE88073.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = -1

Query: 244 NGNRSKGCTRSCDFG--RWEFISPVRYLKHVGGKVAALVVRMAAPPRNKNQPSPKTTSVA 71
           +GNR  G  R+C F   +   +SPV++LKH G KVA  V          +       SVA
Sbjct: 28  SGNRWPG--RNCGFRLLKRSIVSPVKFLKHFGRKVAKAVCLGRRSSPGVSSSGRSKPSVA 85

Query: 70  PLDSQRAEAIHDCIDFINSSS 8
           P D+  AEAI DCIDFINSSS
Sbjct: 86  PSDTHIAEAIEDCIDFINSSS 106


Top