BLASTX nr result
ID: Scutellaria23_contig00001980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00001980
(3548 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1447 0.0
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 1445 0.0
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1364 0.0
ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2... 1343 0.0
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 1338 0.0
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 977
Score = 1447 bits (3745), Expect = 0.0
Identities = 725/989 (73%), Positives = 827/989 (83%), Gaps = 5/989 (0%)
Frame = +3
Query: 147 MASTAPFFPSSRAQFNQRPPAWKPQKKPK---FIPMSTPEIXXXXXXXXXXXXXXXXTLK 317
MASTA + PS +Q W+ QK PK F + E TLK
Sbjct: 1 MASTASYSPSPTSQ-------WRTQKLPKRFNFYVIHNQEFGKLSQSSSLSTSSFPKTLK 53
Query: 318 LPSLHNSTPLLXXXXXXXXXXNFMENTEKVSNLQVIPNGYPSNLMKKSSDRVFIQDPPWI 497
LP +H P+ + EN E++ NLQ IPNG+ L K+S+ RVFIQDPPW+
Sbjct: 54 LPVIH--MPINNIQSQTTVCVSTDENLEELVNLQKIPNGF---LNKESNKRVFIQDPPWV 108
Query: 498 SSLYMKSLLFRSKNSGGVKLEFQEMERRKYY-ILRRRQIKSETEAWENMVDEYRELEREM 674
SSL+M SL R+K GV+ EF+E+ERR+ Y +LRRRQIK+ETEAWE MV+EYRELEREM
Sbjct: 109 SSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREM 168
Query: 675 CERKLAPNLPYFKKLMLGWFQPLREAIEKEQNRQRSKKNKAAFAPFIDALPADKMAVIVM 854
CE+KLAPNLPY KKL+LGWF+PLR+AIEKEQN + + K++AAFAP ID+LPADKMAVIVM
Sbjct: 169 CEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVM 228
Query: 855 HKXXXXXXXXXKEDRCVRVVEAAAKIGVAIEHEIRIHDFLEKEKKHRTKEFESESQEDAS 1034
HK KE+RCV+VV+AA +IG+A+E+E+RIH+FLEK KK + ++SQED S
Sbjct: 229 HKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDMS 288
Query: 1035 KEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLGCCLIELLIQSAYVQPPV 1214
KE ILR+RVKSLI++NRV+EV+KL++SEE +SWGRDTQAKLGC L+ELL ++AYVQ PV
Sbjct: 289 KETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQRPV 348
Query: 1215 NQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVLDGLDKTVKHMIIPYVPM 1394
+QSAD PPD+RPAFRH+FK+A ++PG+N+VKKYGVIECDPLV+ G+D+TVK M+IPYVPM
Sbjct: 349 DQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPM 408
Query: 1395 LVPPKKWKGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPAKQMQKVYEALDTLGNTKWRV 1574
LVPPKKW+GYDKGGYLFLPSYLMRTHGSR+QQDAV+ VP KQMQ+VYEALDTLG+TKWRV
Sbjct: 409 LVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLGSTKWRV 468
Query: 1575 NKRILSVVESIWAAGGNVAGLVNREDIPIPELL-LDDXXXXXXXXXXXXXXXXINQERHS 1751
NKRIL+VVESIWA GGN+AGLV+R+D+PIPEL DD INQE HS
Sbjct: 469 NKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHS 528
Query: 1752 QRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPL 1931
QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPL
Sbjct: 529 QRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPL 588
Query: 1932 GKSGLRWLKIHLANLYGGGVEKLSYDERLSFVENNLAEIFDSADNSLNGNRWWLKAEDPF 2111
GKSGLRWLKIHLA+LY GGVEKL YD RL+FVEN++ +I DSA+N LNGNRWWL AEDPF
Sbjct: 589 GKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPF 648
Query: 2112 QFLAACINLSEALKSPSSHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDKP 2291
Q LAACINLSEALKS S HTVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNLVAG+KP
Sbjct: 649 QCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKP 708
Query: 2292 ADVYSEIAERVHDIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGA 2471
ADVY+EIA RV I++ DS KDPA DP+ALLAKLLI QVDRKLVKQTVMTSVYGVTYVGA
Sbjct: 709 ADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGA 768
Query: 2472 REQIKRRLEEKGLIDDDRLLFSAACYAANVTLMALGELFQAARGIMAWLGDCAKIIASEN 2651
REQIKRRLEEKGLIDDDRLLF+A+CYAA VTL ALGELFQAARG M WLGDCAK+IA EN
Sbjct: 769 REQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIALEN 828
Query: 2652 QPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEFRKQRTAFPPNFVHSLDG 2831
QPVRWTTPLGLPVVQPYFKTQRHVIRTSLQ+LALQREGD+VE RKQRTAFPPNFVHSLDG
Sbjct: 829 QPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNFVHSLDG 888
Query: 2832 SHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQTLRQKFVDLYSAPILENLLESFQT 3011
SHMMMTA+ACRDAGL+FAGVHDSFWTHACDVD+MN+ LR+KFV+LYS PILE+LLE+FQ
Sbjct: 889 SHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLENFQK 948
Query: 3012 SYPHLTFPSLPKRGDFILENVIESPYFFN 3098
SYP LTFP LPKRGDF L V+ESPYFFN
Sbjct: 949 SYPALTFPPLPKRGDFNLREVLESPYFFN 977
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 3; Flags: Precursor
gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
Full=DNA-directed RNA polymerase 3A, chloroplastic;
AltName: Full=NictaRpoT3-syl; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3A;
Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 1445 bits (3741), Expect = 0.0
Identities = 725/989 (73%), Positives = 827/989 (83%), Gaps = 5/989 (0%)
Frame = +3
Query: 147 MASTAPFFPSSRAQFNQRPPAWKPQKKPK---FIPMSTPEIXXXXXXXXXXXXXXXXTLK 317
MASTA + PS +Q W+ QK PK F + E TLK
Sbjct: 1 MASTASYSPSPTSQ-------WRTQKLPKRFNFYVIHNQEFGKLSQSSSLPTSSFPKTLK 53
Query: 318 LPSLHNSTPLLXXXXXXXXXX-NFMENTEKVSNLQVIPNGYPSNLMKKSSDRVFIQDPPW 494
LP + P+ + EN E++ NLQ I NG L K+S+ RVFIQDPPW
Sbjct: 54 LPVIQ--MPINNNIQSQTTVCVSTDENLEELVNLQKIANGV---LTKESNKRVFIQDPPW 108
Query: 495 ISSLYMKSLLFRSKNSGGVKLEFQEMERRKYY-ILRRRQIKSETEAWENMVDEYRELERE 671
+SSL+M SL R+K GV+ EF+E+ERR+ Y +LRRRQIK+ETEAWE MV+EYRELERE
Sbjct: 109 VSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELERE 168
Query: 672 MCERKLAPNLPYFKKLMLGWFQPLREAIEKEQNRQRSKKNKAAFAPFIDALPADKMAVIV 851
MCE+KLAPNLPY KKL+LGWF+PLR+AIEKEQN + + K++AAFAP ID+LPADKMAVIV
Sbjct: 169 MCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIV 228
Query: 852 MHKXXXXXXXXXKEDRCVRVVEAAAKIGVAIEHEIRIHDFLEKEKKHRTKEFESESQEDA 1031
MHK KE+RCV+VV+AA +IG+A+E+E+RIH+FLEK KK + ++SQED
Sbjct: 229 MHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQEDM 288
Query: 1032 SKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLGCCLIELLIQSAYVQPP 1211
S+E ILR+RVKSLI++NRV+EV+KL++SEE +SWGRDTQAKLGC L+ELL ++AYVQPP
Sbjct: 289 SRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQPP 348
Query: 1212 VNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVLDGLDKTVKHMIIPYVP 1391
V+QSAD PPD+RPAFRH+F++A ++PG+++VKKYGVIECDPLV+ G+D+TVK M+IPYVP
Sbjct: 349 VDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIPYVP 408
Query: 1392 MLVPPKKWKGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPAKQMQKVYEALDTLGNTKWR 1571
MLVPPKKW+GYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+VYEALDTLG+TKWR
Sbjct: 409 MLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGSTKWR 468
Query: 1572 VNKRILSVVESIWAAGGNVAGLVNREDIPIPELLLDDXXXXXXXXXXXXXXXXINQERHS 1751
VNKRILSVVESIWA GGN+AGLV+R+D+PIPEL DD INQE HS
Sbjct: 469 VNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQELHS 528
Query: 1752 QRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPL 1931
QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPL
Sbjct: 529 QRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPL 588
Query: 1932 GKSGLRWLKIHLANLYGGGVEKLSYDERLSFVENNLAEIFDSADNSLNGNRWWLKAEDPF 2111
GKSGLRWLKIHLA+LY GG+EKL YD RL+FVEN++ +I DSA+N LNGNRWWL AEDPF
Sbjct: 589 GKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAEDPF 648
Query: 2112 QFLAACINLSEALKSPSSHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDKP 2291
Q LAACINLSEALKS S HTV SHLPIHQDGSCNGLQHYAALGRDS EAAAVNLVAGDKP
Sbjct: 649 QCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGDKP 708
Query: 2292 ADVYSEIAERVHDIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGA 2471
ADVY+EIA RV I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSVYGVTYVGA
Sbjct: 709 ADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGA 768
Query: 2472 REQIKRRLEEKGLIDDDRLLFSAACYAANVTLMALGELFQAARGIMAWLGDCAKIIASEN 2651
REQIKRRLEEKGLIDDDRLLF+A+CYAA VTL ALGELFQAARG M WLGDCAK+IASEN
Sbjct: 769 REQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIASEN 828
Query: 2652 QPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEFRKQRTAFPPNFVHSLDG 2831
QPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VE RKQRTAFPPNFVHSLDG
Sbjct: 829 QPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHSLDG 888
Query: 2832 SHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQTLRQKFVDLYSAPILENLLESFQT 3011
SHMMMTA+ACRDAGL+FAGVHDSFWTHACDVD+MN+ LR+KFV+LYS PILE+LLESFQ
Sbjct: 889 SHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQN 948
Query: 3012 SYPHLTFPSLPKRGDFILENVIESPYFFN 3098
SYP LTFP LPKRGDF L V+ESPYFFN
Sbjct: 949 SYPALTFPPLPKRGDFDLVEVLESPYFFN 977
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 1364 bits (3530), Expect = 0.0
Identities = 677/908 (74%), Positives = 762/908 (83%), Gaps = 2/908 (0%)
Frame = +3
Query: 381 NFMENTEKVSNLQVIPNGYPSNLMKKSSDRVFIQDPPWISSLYMKSLLFRSKNSG-GVKL 557
N +E + SN+QV K+S R+F+QDPPWISS R++ +G VKL
Sbjct: 84 NSIETLQDSSNIQV----------KESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVKL 133
Query: 558 EFQEMERRKYYILRRRQIKSETEAWENMVDEYRELEREMCERKLAPNLPYFKKLMLGWFQ 737
EF+E ERR Y +LRRRQ+K+ETEAWE MV+EYRE+EREMCE+KLAPNLPY K L LGWF+
Sbjct: 134 EFRETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFE 193
Query: 738 PLREAIEKEQNRQRSKKNKAAFAPFIDALPADKMAVIVMHKXXXXXXXXXKEDRCVRVVE 917
PLREAI+KEQ QR+KK KAA+AP I+ LPADKMAVIVMHK +E CVRVV+
Sbjct: 194 PLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHEEG-CVRVVQ 252
Query: 918 AAAKIGVAIEHEIRIHDFLEKEKKHRTKEFESESQEDASKEAAILRQRVKSLIRKNRVIE 1097
AA +IG+AIE E+RIH FLEK K + SQE +E ILR+RVKS IRK ++IE
Sbjct: 253 AAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGL-REKEILRKRVKSFIRKKKIIE 311
Query: 1098 VQKLVRSEEYKSWGRDTQAKLGCCLIELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMA 1277
VQKLV++EE WGRDTQAKLG LIELL ++AYVQ PVNQSAD PPDVRPAFRH FK
Sbjct: 312 VQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTV 371
Query: 1278 AKEPGQNLVKKYGVIECDPLVLDGLDKTVKHMIIPYVPMLVPPKKWKGYDKGGYLFLPSY 1457
KE GQ +KYGVIECDPLVL GLD+T KHM+IPYVPML+PPKKWKGYDKGGYLFLPSY
Sbjct: 372 TKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSY 431
Query: 1458 LMRTHGSRQQQDAVKAVPAKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGGNVAGL 1637
+MRTHGSR+QQDAVK+VP +Q+QKV+EALDTLGNTKWR+N+R+LSVVESIWA GGN+ GL
Sbjct: 432 VMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGL 491
Query: 1638 VNREDIPIPEL-LLDDXXXXXXXXXXXXXXXXINQERHSQRCDIELKLSVARKMKDEEGF 1814
V+RE++P+PE +D INQERHS RCD E+KLSVARKMKDEEGF
Sbjct: 492 VDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGF 551
Query: 1815 YYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVE 1994
YYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLRWLKI LANLY GGVE
Sbjct: 552 YYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVE 611
Query: 1995 KLSYDERLSFVENNLAEIFDSADNSLNGNRWWLKAEDPFQFLAACINLSEALKSPSSHTV 2174
KLSYD RL+FV+N+L ++FDSADN LNGNRWWL AEDPFQ LAACINLSEAL+S S HTV
Sbjct: 612 KLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTV 671
Query: 2175 ISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDKPADVYSEIAERVHDIMKRDSEK 2354
ISHLPIHQDGSCNGLQHYAALGR+S EA+AVNLVAG+KPADVYSEIA RVH+IMKRDS K
Sbjct: 672 ISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNK 731
Query: 2355 DPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLF 2534
DPATDP ALLAK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKGLI D+RLLF
Sbjct: 732 DPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLF 791
Query: 2535 SAACYAANVTLMALGELFQAARGIMAWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQ 2714
+AACYAA VTL ALGE+FQAAR IMAWLG+CAK+IASENQPV+WTTPLGLPV+QPY K++
Sbjct: 792 TAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSE 851
Query: 2715 RHVIRTSLQVLALQREGDSVEFRKQRTAFPPNFVHSLDGSHMMMTAIACRDAGLRFAGVH 2894
RH+IRTSLQVLALQREG V RKQRTAFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVH
Sbjct: 852 RHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVH 911
Query: 2895 DSFWTHACDVDRMNQTLRQKFVDLYSAPILENLLESFQTSYPHLTFPSLPKRGDFILENV 3074
DSFWTHACDVD+MNQ LR+KFV+LYS PILENLLESFQTS+P LTFP LP RG+F L V
Sbjct: 912 DSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREV 971
Query: 3075 IESPYFFN 3098
+ESPYFFN
Sbjct: 972 LESPYFFN 979
>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
predicted protein [Populus trichocarpa]
Length = 882
Score = 1343 bits (3476), Expect = 0.0
Identities = 662/882 (75%), Positives = 747/882 (84%), Gaps = 1/882 (0%)
Frame = +3
Query: 456 KSSDRVFIQDPPWISSLYMKSLLFRSKNSGGVKLEFQEMERRKYYILRRRQIKSETEAWE 635
+SS +VFIQDPPWIS+ + K + + VK+EF+++E+RKY +LRRRQI+ ETEAWE
Sbjct: 4 ESSKKVFIQDPPWISAHFWKGMYKLANKK--VKVEFKDIEKRKYNLLRRRQIREETEAWE 61
Query: 636 NMVDEYRELEREMCERKLAPNLPYFKKLMLGWFQPLREAIEKEQNRQRSKKNKAAFAPFI 815
M DEYR L REMCERKLAPNLPY K L+LGWF+PL+EAIEKEQ ++SKK K+AF+P I
Sbjct: 62 RMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNI 121
Query: 816 DALPADKMAVIVMHKXXXXXXXXXKEDRCVRVVEAAAKIGVAIEHEIRIHDFLEKEKKHR 995
+ LPADKMAVIVMHK ED CVRVV+AA +IG+AIE E+RIH+FLEK K ++
Sbjct: 122 ELLPADKMAVIVMHKMMGLLMVGH-EDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQ 180
Query: 996 TKEFESESQEDASKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLGCCLI 1175
K+ E QE KE +LR+RV SLIR+ R++EVQ LV+ +E K W R TQAKLG LI
Sbjct: 181 RKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLI 240
Query: 1176 ELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVLDGLD 1355
ELL ++AYVQPPVNQS D PPDVRPAFRHIFK K PGQ +VKKYGVIECDPL+L GLD
Sbjct: 241 ELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLD 300
Query: 1356 KTVKHMIIPYVPMLVPPKKWKGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPAKQMQKVY 1535
T KHM+IPY PMLVPPKKWKGYDKGG+LFLPSY+MRTHGSRQQQ AV++VP KQMQKV+
Sbjct: 301 GTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVF 360
Query: 1536 EALDTLGNTKWRVNKRILSVVESIWAAGGNVAGLVNREDIPIPEL-LLDDXXXXXXXXXX 1712
EALDTLGNTKWRVN+R+L VVE IW +GGN+AGLV+REDIPIPE DD
Sbjct: 361 EALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWS 420
Query: 1713 XXXXXXINQERHSQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1892
INQERHSQRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL
Sbjct: 421 VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 480
Query: 1893 CRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDERLSFVENNLAEIFDSADNSL 2072
CRG+LEF EGRPLGKSGLRWLKIHLANLY GGVEKLS+D RL+FVEN+L+EIFDSA N +
Sbjct: 481 CRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPV 540
Query: 2073 NGNRWWLKAEDPFQFLAACINLSEALKSPSSHTVISHLPIHQDGSCNGLQHYAALGRDSF 2252
NG RWWLKAEDPFQ LAACINLSEAL S S HTVISHLPIHQDGSCNGLQHYAALGRD+
Sbjct: 541 NGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTL 600
Query: 2253 EAAAVNLVAGDKPADVYSEIAERVHDIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQT 2432
EAAAVNLVA +KP+DVYSEIA RVH+I++RDS KDPAT+P ALLAK+L+ QVDRKLVKQT
Sbjct: 601 EAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQT 660
Query: 2433 VMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFSAACYAANVTLMALGELFQAARGIMA 2612
VMTSVYGVTYVGAREQIKRRLEEKG I DDRLLFSAACY A VTL ALGELFQAAR IM+
Sbjct: 661 VMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMS 720
Query: 2613 WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEFRKQR 2792
WLGDCAKIIASE+QPV+WTTPLGLPVVQPY+KT+RH+I+TSLQ+LALQREG SV+ RKQR
Sbjct: 721 WLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQR 780
Query: 2793 TAFPPNFVHSLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQTLRQKFVDLYS 2972
TAFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTHA DVD MN+ LR+KFV+LY+
Sbjct: 781 TAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYN 840
Query: 2973 APILENLLESFQTSYPHLTFPSLPKRGDFILENVIESPYFFN 3098
PILENLLE FQTSYP L FP LP+RG+F L+ V+ SPYFFN
Sbjct: 841 MPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
sativus]
Length = 975
Score = 1338 bits (3462), Expect = 0.0
Identities = 670/986 (67%), Positives = 785/986 (79%), Gaps = 2/986 (0%)
Frame = +3
Query: 147 MASTAPFFPSSRAQFNQRPPAWKPQKKPKFIPMSTPEIXXXXXXXXXXXXXXXXTLKLPS 326
M +TA FFP+ +A + KP K+ K + P ++ P
Sbjct: 1 MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHPSFTSTFNSPLS-------SVSFPV 53
Query: 327 LHNSTP--LLXXXXXXXXXXNFMENTEKVSNLQVIPNGYPSNLMKKSSDRVFIQDPPWIS 500
+ST L NF E + NLQ+ + +SS R+FIQDPPWI+
Sbjct: 54 NFDSTSQSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIA 113
Query: 501 SLYMKSLLFRSKNSGGVKLEFQEMERRKYYILRRRQIKSETEAWENMVDEYRELEREMCE 680
SL++K L + VKLEF E+E+RKY +LRRRQIK+ETEAWE MV+EY+ELEREMCE
Sbjct: 114 SLFLKGLYKCVQKE--VKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCE 171
Query: 681 RKLAPNLPYFKKLMLGWFQPLREAIEKEQNRQRSKKNKAAFAPFIDALPADKMAVIVMHK 860
+KLAPNLPY KKL LGWF+PL+ AIE+EQ QRSKK KAAFAP I+ L ADKMAVIVM+K
Sbjct: 172 KKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYK 231
Query: 861 XXXXXXXXXKEDRCVRVVEAAAKIGVAIEHEIRIHDFLEKEKKHRTKEFESESQEDASKE 1040
+D CV+VV+AA +IG AIE E+RI LEK + ++ + +++ E +KE
Sbjct: 232 MMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADT-ECLTKE 289
Query: 1041 AAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLGCCLIELLIQSAYVQPPVNQ 1220
+LR++V LIR+ ++ EVQKL++ EE+K+WGRDTQAKLG LIELLI+SA++QPPV+Q
Sbjct: 290 KEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQ 349
Query: 1221 SADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVLDGLDKTVKHMIIPYVPMLV 1400
SAD PPD+RPAF H FK AK PGQN VKKYGV+ECDP+VL GLD+T KHM+IPY+PMLV
Sbjct: 350 SADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLV 409
Query: 1401 PPKKWKGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPAKQMQKVYEALDTLGNTKWRVNK 1580
PPKKWKGYDKGG+ FLPSY+MRTHGS +QQDA+K + KQMQKV+EALD LG+TKWRVN+
Sbjct: 410 PPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR 469
Query: 1581 RILSVVESIWAAGGNVAGLVNREDIPIPELLLDDXXXXXXXXXXXXXXXXINQERHSQRC 1760
+LSVVES+WA GGN AGLV+R+D+PIPE L D INQE HSQRC
Sbjct: 470 SVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRC 529
Query: 1761 DIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKS 1940
D+ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKS
Sbjct: 530 DVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKS 589
Query: 1941 GLRWLKIHLANLYGGGVEKLSYDERLSFVENNLAEIFDSADNSLNGNRWWLKAEDPFQFL 2120
GL WLKIHLANLY GGVEKLSYDERL+FV+++L IFDSA N +NG+RWWL AEDPFQ L
Sbjct: 590 GLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCL 649
Query: 2121 AACINLSEALKSPSSHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDKPADV 2300
AAC+NLSEALKS + HTVIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAG+KPADV
Sbjct: 650 AACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADV 709
Query: 2301 YSEIAERVHDIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQ 2480
YSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLVKQTVMTSVYGVTY+GAREQ
Sbjct: 710 YSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQ 769
Query: 2481 IKRRLEEKGLIDDDRLLFSAACYAANVTLMALGELFQAARGIMAWLGDCAKIIASENQPV 2660
IKRRLEEKGLI DDRL F A+CYAA VTL ALGE+F+AARGIM WLGDCAK+IA +NQPV
Sbjct: 770 IKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPV 829
Query: 2661 RWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEFRKQRTAFPPNFVHSLDGSHM 2840
RWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+ RKQRTAFPPNFVHSLDGSHM
Sbjct: 830 RWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHM 889
Query: 2841 MMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQTLRQKFVDLYSAPILENLLESFQTSYP 3020
M+TA+ACRDAGLRFAGVHDSFWTHACDVDRMN LR+KFV+LYS P+LE+LLE F+T+YP
Sbjct: 890 MLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYP 949
Query: 3021 HLTFPSLPKRGDFILENVIESPYFFN 3098
LTFPSLP RGDF L+ V++SPYFFN
Sbjct: 950 GLTFPSLPGRGDFDLQEVLKSPYFFN 975