BLASTX nr result

ID: Scutellaria23_contig00001923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001923
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]       91   1e-16
ref|XP_003574911.1| PREDICTED: uncharacterized protein LOC100846...    91   1e-16
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]       91   1e-16
ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein o...    91   1e-16
ref|XP_004155624.1| PREDICTED: chlorophyll a-b binding protein o...    91   1e-16

>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
          Length = 274

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 227 MFGFFVQAIVTGKGPLENLADHLADPVSNNAWAYATNFVPGK 102
           MFGFFVQAIVTGKGP+ENLADHLADPVSNNAWAYATNFVPGK
Sbjct: 233 MFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274


>ref|XP_003574911.1| PREDICTED: uncharacterized protein LOC100846020 [Brachypodium
           distachyon]
          Length = 560

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = -3

Query: 227 MFGFFVQAIVTGKGPLENLADHLADPVSNNAWAYATNFVPGK*GLSP 87
           MFGFFVQAIVTGKGPLENLADHLADPV+NNAWA+ATNFVPGK  L P
Sbjct: 219 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGKEELEP 265


>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
          Length = 274

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 227 MFGFFVQAIVTGKGPLENLADHLADPVSNNAWAYATNFVPGK 102
           MFGFFVQAIVTGKGP+ENLADHLADPVSNNAWAYATNFVPGK
Sbjct: 233 MFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274


>ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 227 MFGFFVQAIVTGKGPLENLADHLADPVSNNAWAYATNFVPGK 102
           MFGFFVQAIVTGKGPLENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265


>ref|XP_004155624.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 153

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 227 MFGFFVQAIVTGKGPLENLADHLADPVSNNAWAYATNFVPGK 102
           MFGFFVQAIVTGKGPLENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 112 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 153


Top