BLASTX nr result

ID: Scutellaria23_contig00001889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001889
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|...    60   2e-07
ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-...    57   2e-06
ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-...    57   2e-06
emb|CBI38730.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-...    55   8e-06

>ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
           gi|222844405|gb|EEE81952.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1817

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = +3

Query: 54  GRPSYWLDACEDVLCD--DYFVDFGAAVTNSIPEPEPHPNGGCHDPCFFGGIDQILDNIK 227
           G PSYWLDACED+ CD  D FVDF    T+ +PE     N   ++  FFGGID ILD+IK
Sbjct: 16  GGPSYWLDACEDISCDIIDDFVDFD---TSIVPELSVDNNSNVNND-FFGGIDHILDSIK 71


>ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1942

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = +3

Query: 60  PSYWLDACEDVLCDDYFVDFGAAVTNSIPEPEPHPNGGCHDPCFFGGIDQILDNIK 227
           PSYWLDACED+ CDD F+DF  +      +P+   N       FFGGID+ILD+IK
Sbjct: 13  PSYWLDACEDISCDD-FIDFDVSSIVVSDQPDNPSNQD-----FFGGIDKILDSIK 62


>ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +3

Query: 60  PSYWLDACEDVLCDDYFVDFGAAVTNSIPEPEPHPNGGCHDPCFFGGIDQILDNIK 227
           PSYWLDACED+ CDD F+DF   V++ + +   +P+    +  FFGGID+ILD+IK
Sbjct: 13  PSYWLDACEDISCDD-FIDFD--VSSIVSDQPDNPS----NQDFFGGIDKILDSIK 61


>emb|CBI38730.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +3

Query: 48  IDGRPSYWLDACEDVLCDDYFVDFGAAVTNSIPEPEPHPNGGCHDPCFFGGIDQILDNIK 227
           + G  +YWLDACED+ CD  F +F + + +   +   +P+G      FFGGID+ILD+IK
Sbjct: 10  VSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGVGD---FFGGIDRILDSIK 66


>ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
          Length = 1971

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +3

Query: 48  IDGRPSYWLDACEDVLCDDYFVDFGAAVTNSIPEPEPHPNGGCHDPCFFGGIDQILDNIK 227
           + G  +YWLDACED+ CD  F +F + + +   +   +P+G      FFGGID+ILD+IK
Sbjct: 10  VSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGVGD---FFGGIDRILDSIK 66