BLASTX nr result
ID: Scutellaria23_contig00001787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00001787
(895 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum] 474 e-131
gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum] 471 e-130
gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] 471 e-130
emb|CBI19489.3| unnamed protein product [Vitis vinifera] 458 e-127
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [... 458 e-127
>dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 474 bits (1219), Expect = e-131
Identities = 235/298 (78%), Positives = 259/298 (86%), Gaps = 1/298 (0%)
Frame = -3
Query: 893 GMLMNDKQVYVGRFLRKQERDTSSXXXXXXXXXXXNLADSTTDDDLKNTFGEYGTITSAV 714
GMLMNDKQVYVG FLRKQER++++ NL++STTDD+LK FGE+G ITSAV
Sbjct: 188 GMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDELKKVFGEFGNITSAV 247
Query: 713 VMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFDDKEWYVGKAQKKSEREQELKNRFE 534
VMRDADGKSKCFG +LNGK FDDKEWYVGKAQKKSEREQELK++FE
Sbjct: 248 VMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFE 307
Query: 533 QTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAF 354
QT KE VDK G+NLYVKNLDD+IDDEKLKELF++FGTITSCKVMRDP+GISRGSGFVAF
Sbjct: 308 QTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAF 367
Query: 353 STPEEASRALSEMNGKMVISKPLYVALAQRKEERRARLQAQFSLMRPVAMPPSLAPRMPM 174
ST EEASRALSEMNGKM++SKPLYVALAQRKEERRA+LQAQFS +RPVAMPPSLAPRMP+
Sbjct: 368 STSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLQAQFSQLRPVAMPPSLAPRMPI 427
Query: 173 YPPGAPGLGQQLFYGQA-PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 3
YPPGAPG+GQQLFYGQ PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFF+P+VQQGQQ
Sbjct: 428 YPPGAPGIGQQLFYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPLVQQGQQ 485
Score = 117 bits (292), Expect = 5e-24
Identities = 68/186 (36%), Positives = 97/186 (52%)
Frame = -3
Query: 785 LADSTTDDDLKNTFGEYGTITSAVVMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFD 606
L S + L +TF +G I S + D++G+SK +G LNG +
Sbjct: 133 LDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGMLMN 192
Query: 605 DKEWYVGKAQKKSEREQELKNRFEQTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADF 426
DK+ YVG +K ERE T N+YVKNL +S D++LK++F +F
Sbjct: 193 DKQVYVGHFLRKQERE------------STTGMTKFQNVYVKNLSESTTDDELKKVFGEF 240
Query: 425 GTITSCKVMRDPTGISRGSGFVAFSTPEEASRALSEMNGKMVISKPLYVALAQRKEERRA 246
G ITS VMRD G S+ GF+ F T E+A++A+ +NGK K YV AQ+K ER
Sbjct: 241 GNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQ 300
Query: 245 RLQAQF 228
L+++F
Sbjct: 301 ELKSKF 306
Score = 80.9 bits (198), Expect = 4e-13
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Frame = -3
Query: 776 STTDDDLKNTFGEYGTITSAVVMRD-ADGKSKCFGXXXXXXXXXXXXXXXALNGKSFDDK 600
+ TD L + F + G + S V RD + +S +G LN + K
Sbjct: 48 NVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAMEMLNFTPVNGK 107
Query: 599 EWYVGKAQKKSEREQELKNRFEQTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADFGT 420
V S R+ L+ K+ N+++KNLD SID++ L + F+ FG
Sbjct: 108 SIRV----MYSHRDPTLR------------KSGSANIFIKNLDKSIDNKALHDTFSSFGN 151
Query: 419 ITSCKVMRDPTGISRGSGFVAFSTPEEASRALSEMNGKMVISKPLYVALAQRKEERRA 246
I SCK+ D G S+G GFV + E A A+ ++NG ++ K +YV RK+ER +
Sbjct: 152 ILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLRKQERES 209
>gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 471 bits (1212), Expect = e-130
Identities = 234/298 (78%), Positives = 258/298 (86%), Gaps = 1/298 (0%)
Frame = -3
Query: 893 GMLMNDKQVYVGRFLRKQERDTSSXXXXXXXXXXXNLADSTTDDDLKNTFGEYGTITSAV 714
GMLMNDKQVYVG FLRKQER++++ NL++STTDD LK FGE+G ITSAV
Sbjct: 10 GMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDGLKKVFGEFGNITSAV 69
Query: 713 VMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFDDKEWYVGKAQKKSEREQELKNRFE 534
VMRDADGKSKCFG +LNGK FDDKEWYVGKAQKKSEREQELK++FE
Sbjct: 70 VMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFE 129
Query: 533 QTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAF 354
QT KE VDK G+NLYVKNLDD+IDDEKLKELF++FGTITSCKVMRDP+GISRGSGFVAF
Sbjct: 130 QTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAF 189
Query: 353 STPEEASRALSEMNGKMVISKPLYVALAQRKEERRARLQAQFSLMRPVAMPPSLAPRMPM 174
ST EEASRALSEMNGKM++SKPLYVALAQRKEERRA+L+AQFS +RPVAMPPSLAPRMP+
Sbjct: 190 STSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQLRPVAMPPSLAPRMPI 249
Query: 173 YPPGAPGLGQQLFYGQA-PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 3
YPPGAPG+GQQLFYGQ PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFF+P+VQQGQQ
Sbjct: 250 YPPGAPGIGQQLFYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPLVQQGQQ 307
Score = 98.6 bits (244), Expect = 2e-18
Identities = 55/133 (41%), Positives = 75/133 (56%)
Frame = -3
Query: 626 LNGKSFDDKEWYVGKAQKKSEREQELKNRFEQTTKETVDKNPGVNLYVKNLDDSIDDEKL 447
LNG +DK+ YVG +K ERE T N+YVKNL +S D+ L
Sbjct: 8 LNGMLMNDKQVYVGHFLRKQERE------------STTGMTKFQNVYVKNLSESTTDDGL 55
Query: 446 KELFADFGTITSCKVMRDPTGISRGSGFVAFSTPEEASRALSEMNGKMVISKPLYVALAQ 267
K++F +FG ITS VMRD G S+ GF+ F T E+A++A+ +NGK K YV AQ
Sbjct: 56 KKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQ 115
Query: 266 RKEERRARLQAQF 228
+K ER L+++F
Sbjct: 116 KKSEREQELKSKF 128
>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 471 bits (1211), Expect = e-130
Identities = 237/298 (79%), Positives = 254/298 (85%), Gaps = 1/298 (0%)
Frame = -3
Query: 893 GMLMNDKQVYVGRFLRKQERDTSSXXXXXXXXXXXNLADSTTDDDLKNTFGEYGTITSAV 714
GMLMNDKQVYVG FLRKQ+RD+ NL+DST++DDL+ TFGEYGTITS V
Sbjct: 190 GMLMNDKQVYVGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVV 249
Query: 713 VMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFDDKEWYVGKAQKKSEREQELKNRFE 534
VMRDADGKSKCFG ALNGK FDDKEWYVGKAQKKSERE ELK+RFE
Sbjct: 250 VMRDADGKSKCFGFVNFENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFE 309
Query: 533 QTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAF 354
QT KE VDK GVNLYVKNLDD+IDDEKLKELF+++GTITSCKVMRDP+GISRGSGFVAF
Sbjct: 310 QTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAF 369
Query: 353 STPEEASRALSEMNGKMVISKPLYVALAQRKEERRARLQAQFSLMRPVAMPPSLAPRMPM 174
STPEEASRAL EMNGKM++SKPLYVALAQRKEERRARLQAQFS MRPVAMPPS+ PRMPM
Sbjct: 370 STPEEASRALGEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMPPSMGPRMPM 429
Query: 173 YPPGAPGLGQQLFYGQA-PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 3
Y PGAPG+GQQLFYGQA PAMI PQAGFGYQQQLVPGMRPGG PMPNFF+PMVQQGQQ
Sbjct: 430 YSPGAPGMGQQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQ 487
Score = 88.6 bits (218), Expect = 2e-15
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Frame = -3
Query: 785 LADSTTDDDLKNTFGEYGTITSAVVMRD-ADGKSKCFGXXXXXXXXXXXXXXXALNGKSF 609
L S TD L + F + G + S V RD + G+S +G LN
Sbjct: 47 LDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDVLNFTPL 106
Query: 608 DDKEWYVGKAQKKSEREQELKNRFEQTTKETVDKNPGV-NLYVKNLDDSIDDEKLKELFA 432
++K V +++ + D+ G N+++KNLD SID + L E F+
Sbjct: 107 NNKTIRVSVSRR-----------------DPTDRKSGAGNIFIKNLDKSIDIKALHETFS 149
Query: 431 DFGTITSCKVMRDPTGISRGSGFVAFSTPEEASRALSEMNGKMVISKPLYVALAQRKEER 252
FGTI SCK+ D +G S+G GFV + + E A A+ ++NG ++ K +YV + RK++R
Sbjct: 150 SFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDR 209
Query: 251 RARL 240
+ +
Sbjct: 210 DSEM 213
>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 458 bits (1178), Expect = e-127
Identities = 231/298 (77%), Positives = 253/298 (84%), Gaps = 1/298 (0%)
Frame = -3
Query: 893 GMLMNDKQVYVGRFLRKQERDTSSXXXXXXXXXXXNLADSTTDDDLKNTFGEYGTITSAV 714
GML+NDKQVYVG+FLRKQER+T+ NL++STT++DLKN FGE+G ITS V
Sbjct: 168 GMLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVV 227
Query: 713 VMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFDDKEWYVGKAQKKSEREQELKNRFE 534
VMRD DGKSKCFG ALNGK FD+KEWYVGKAQKK ERE ELK RFE
Sbjct: 228 VMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFE 287
Query: 533 QTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAF 354
Q+ KE VDK GVNLY+KNLDDSI D+KLKELF++FGTITSCKVMRDP+GISRGSGFVAF
Sbjct: 288 QSMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAF 347
Query: 353 STPEEASRALSEMNGKMVISKPLYVALAQRKEERRARLQAQFSLMRPVAMPPSLAPRMPM 174
ST EEASRAL+EMNGKMV+SKPLYVALAQRKEERRARLQAQFS MRPV+M PS+APRMPM
Sbjct: 348 STSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPM 407
Query: 173 YPPGAPGLGQQLFYGQA-PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 3
YPPGAPGLGQQLFYGQ PA+IPPQAGFGYQQQLVPGMRPGGAPMPNFFVP+VQQGQQ
Sbjct: 408 YPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQ 465
Score = 110 bits (276), Expect = 3e-22
Identities = 69/187 (36%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Frame = -3
Query: 785 LADSTTDDDLKNTFGEYGTITSAVVMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFD 606
L S + L +TF +G I S + D G+SK +G LNG +
Sbjct: 113 LDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLIN 172
Query: 605 DKEWYVGKAQKKSEREQEL-KNRFEQTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFAD 429
DK+ YVG+ +K ERE L K +F N+YVKNL +S +E LK +F +
Sbjct: 173 DKQVYVGQFLRKQERETALNKTKFN-------------NVYVKNLSESTTEEDLKNIFGE 219
Query: 428 FGTITSCKVMRDPTGISRGSGFVAFSTPEEASRALSEMNGKMVISKPLYVALAQRKEERR 249
FG ITS VMRD G S+ GFV F ++A+ A+ +NGK K YV AQ+K ER
Sbjct: 220 FGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERE 279
Query: 248 ARLQAQF 228
L+ +F
Sbjct: 280 LELKGRF 286
Score = 85.1 bits (209), Expect = 2e-14
Identities = 39/93 (41%), Positives = 59/93 (63%)
Frame = -3
Query: 518 TVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAFSTPEE 339
++ K+ N+++KNLD SID++ L + F+ FG I SCK+ DP+G S+G GFV F E
Sbjct: 99 SIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEES 158
Query: 338 ASRALSEMNGKMVISKPLYVALAQRKEERRARL 240
A A+ ++NG ++ K +YV RK+ER L
Sbjct: 159 AQNAIDKLNGMLINDKQVYVGQFLRKQERETAL 191
>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein
VITISV_017035 [Vitis vinifera]
Length = 640
Score = 458 bits (1178), Expect = e-127
Identities = 231/298 (77%), Positives = 253/298 (84%), Gaps = 1/298 (0%)
Frame = -3
Query: 893 GMLMNDKQVYVGRFLRKQERDTSSXXXXXXXXXXXNLADSTTDDDLKNTFGEYGTITSAV 714
GML+NDKQVYVG+FLRKQER+T+ NL++STT++DLKN FGE+G ITS V
Sbjct: 168 GMLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVV 227
Query: 713 VMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFDDKEWYVGKAQKKSEREQELKNRFE 534
VMRD DGKSKCFG ALNGK FD+KEWYVGKAQKK ERE ELK RFE
Sbjct: 228 VMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFE 287
Query: 533 QTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAF 354
Q+ KE VDK GVNLY+KNLDDSI D+KLKELF++FGTITSCKVMRDP+GISRGSGFVAF
Sbjct: 288 QSMKEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAF 347
Query: 353 STPEEASRALSEMNGKMVISKPLYVALAQRKEERRARLQAQFSLMRPVAMPPSLAPRMPM 174
ST EEASRAL+EMNGKMV+SKPLYVALAQRKEERRARLQAQFS MRPV+M PS+APRMPM
Sbjct: 348 STSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPM 407
Query: 173 YPPGAPGLGQQLFYGQA-PAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQ 3
YPPGAPGLGQQLFYGQ PA+IPPQAGFGYQQQLVPGMRPGGAPMPNFFVP+VQQGQQ
Sbjct: 408 YPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQ 465
Score = 110 bits (276), Expect = 3e-22
Identities = 69/187 (36%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Frame = -3
Query: 785 LADSTTDDDLKNTFGEYGTITSAVVMRDADGKSKCFGXXXXXXXXXXXXXXXALNGKSFD 606
L S + L +TF +G I S + D G+SK +G LNG +
Sbjct: 113 LDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLIN 172
Query: 605 DKEWYVGKAQKKSEREQEL-KNRFEQTTKETVDKNPGVNLYVKNLDDSIDDEKLKELFAD 429
DK+ YVG+ +K ERE L K +F N+YVKNL +S +E LK +F +
Sbjct: 173 DKQVYVGQFLRKQERETALNKTKFN-------------NVYVKNLSESTTEEDLKNIFGE 219
Query: 428 FGTITSCKVMRDPTGISRGSGFVAFSTPEEASRALSEMNGKMVISKPLYVALAQRKEERR 249
FG ITS VMRD G S+ GFV F ++A+ A+ +NGK K YV AQ+K ER
Sbjct: 220 FGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERE 279
Query: 248 ARLQAQF 228
L+ +F
Sbjct: 280 LELKGRF 286
Score = 85.1 bits (209), Expect = 2e-14
Identities = 39/93 (41%), Positives = 59/93 (63%)
Frame = -3
Query: 518 TVDKNPGVNLYVKNLDDSIDDEKLKELFADFGTITSCKVMRDPTGISRGSGFVAFSTPEE 339
++ K+ N+++KNLD SID++ L + F+ FG I SCK+ DP+G S+G GFV F E
Sbjct: 99 SIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEES 158
Query: 338 ASRALSEMNGKMVISKPLYVALAQRKEERRARL 240
A A+ ++NG ++ K +YV RK+ER L
Sbjct: 159 AQNAIDKLNGMLINDKQVYVGQFLRKQERETAL 191