BLASTX nr result

ID: Scutellaria23_contig00001755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001755
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17535.3| unnamed protein product [Vitis vinifera]              245   5e-63
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   245   5e-63
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      244   1e-62
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...   235   4e-60
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei...   232   4e-59

>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  245 bits (625), Expect = 5e-63
 Identities = 120/166 (72%), Positives = 134/166 (80%)
 Frame = -1

Query: 500 MGDYGDAMMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTANLLKLFXXXXXXXXXX 321
           MGDY DA+MRN NAAVQARTKAQNRANV+QLKLIGQSHPTGLTANLLKLF          
Sbjct: 1   MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 320 XXXXXKCPPYSGISQFVSNFAEPGDPDYAPPVQKGETPAERKARIHQIRXXXXXXXXXXX 141
                KCPPY+G++QF SNFAEPG+P+Y+PPVQK ETPA+R+ARIH++R           
Sbjct: 61  PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120

Query: 140 XXKYDPNNDPSVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 3
             KYDPNNDP++SGDPYKTLFVARLNYETTESRIKREFEAYGPIKR
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 166


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  245 bits (625), Expect = 5e-63
 Identities = 120/166 (72%), Positives = 134/166 (80%)
 Frame = -1

Query: 500 MGDYGDAMMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTANLLKLFXXXXXXXXXX 321
           MGDY DA+MRN NAAVQARTKAQNRANV+QLKLIGQSHPTGLTANLLKLF          
Sbjct: 1   MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 320 XXXXXKCPPYSGISQFVSNFAEPGDPDYAPPVQKGETPAERKARIHQIRXXXXXXXXXXX 141
                KCPPY+G++QF SNFAEPG+P+Y+PPVQK ETPA+R+ARIH++R           
Sbjct: 61  PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120

Query: 140 XXKYDPNNDPSVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 3
             KYDPNNDP++SGDPYKTLFVARLNYETTESRIKREFEAYGPIKR
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 166


>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  244 bits (622), Expect = 1e-62
 Identities = 122/166 (73%), Positives = 132/166 (79%)
 Frame = -1

Query: 500 MGDYGDAMMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTANLLKLFXXXXXXXXXX 321
           MGDY DA+MRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLT NLLKLF          
Sbjct: 1   MGDYSDALMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKP 60

Query: 320 XXXXXKCPPYSGISQFVSNFAEPGDPDYAPPVQKGETPAERKARIHQIRXXXXXXXXXXX 141
                KCPPY+G++QFVSNFA+PGD +YAPPVQK ETP ER+ARIH+IR           
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAQPGDAEYAPPVQKAETPVERRARIHKIRLEEGAKKAAEE 120

Query: 140 XXKYDPNNDPSVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 3
             KYDPNNDP++SGDPYKTLFVARLNYETTESRIKREFEAYG IKR
Sbjct: 121 LEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGAIKR 166


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
           communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
           ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score =  235 bits (600), Expect = 4e-60
 Identities = 115/166 (69%), Positives = 130/166 (78%)
 Frame = -1

Query: 500 MGDYGDAMMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTANLLKLFXXXXXXXXXX 321
           MGDY DA MRNQNAAV+  TK QNRANV+QLKLIGQSHPTGLTANLLKLF          
Sbjct: 1   MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 320 XXXXXKCPPYSGISQFVSNFAEPGDPDYAPPVQKGETPAERKARIHQIRXXXXXXXXXXX 141
                KCPPY+G++QFV+ FAEPGDP+YAPPVQ+ ETP +R+ARIHQ+R           
Sbjct: 61  PPEKRKCPPYTGMAQFVTQFAEPGDPEYAPPVQEAETPTQRRARIHQLRLEKGAEKAAEE 120

Query: 140 XXKYDPNNDPSVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 3
             KYDPN+DP++SGDPYKTLFVARLNYETTESRIKREFE+YGPIKR
Sbjct: 121 LQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKR 166


>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
           small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus]
          Length = 505

 Score =  232 bits (592), Expect = 4e-59
 Identities = 118/166 (71%), Positives = 129/166 (77%)
 Frame = -1

Query: 500 MGDYGDAMMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTANLLKLFXXXXXXXXXX 321
           MGDY DA MRNQNAAVQARTKAQNRANV+QLKLIGQSHPTGLTANLLKLF          
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 320 XXXXXKCPPYSGISQFVSNFAEPGDPDYAPPVQKGETPAERKARIHQIRXXXXXXXXXXX 141
                KCPP +G++QFVSNFAEP DP+YAPPVQKGETP ER+ARIH +R           
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120

Query: 140 XXKYDPNNDPSVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKR 3
             KY   +DP+V+GDPYKTLFVARLNYETTESRIKREFE+YGPIKR
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKR 166


Top