BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001716
         (3385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...  1035   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]             1005   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   949   0.0  
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   944   0.0  
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...   929   0.0  

>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score = 1035 bits (2676), Expect = 0.0
 Identities = 591/1075 (54%), Positives = 733/1075 (68%), Gaps = 32/1075 (2%)
 Frame = -2

Query: 3345 MLVPLCNCNRHFSFLPSRTLQKPLCQIPICNHPKFPIKSCHRRVS-ISAAAVEAGSQALP 3169
            ML+ LC   RH S  PS T        P    P    K+ + + S     A    +Q LP
Sbjct: 25   MLLTLC---RHHSPFPSPT--PTFTSSPPSISPS-TFKTLNPKPSKFILRASNPDAQTLP 78

Query: 3168 QSAIKRIAEKLRSLGYVXXXXXSNGEDEGLIGGPNSP-----GEIFMPLPSRLPKRQVGH 3004
            ++AI+RIAEKLRSLGYV      +G++   +   + P     GEIF+PLP++LPK +VGH
Sbjct: 79   KTAIQRIAEKLRSLGYV------DGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGH 132

Query: 3003 TLDQSWSTPENPVPQPGSGNAIQRFHELRRGVLXXXXXXXXXXXXXXESAPSLAELKLPA 2824
            T+DQSWS PENPVP+PG+G  I RFHELR+ V               E AP+LAEL LP 
Sbjct: 133  TIDQSWSLPENPVPEPGTGGVITRFHELRKEV----KREKKLVRKEDERAPTLAELTLPE 188

Query: 2823 EELRRLRTEGIALKQKLKVGKAGITEGIVNGIHERWRRSELVKIACEDLCRLNMKRTHDL 2644
            EELRRL+  GI +++KLKVGKAGITEGIVNGIHERWRR+E+VKI CED+C+LNMKRTHD+
Sbjct: 189  EELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDI 248

Query: 2643 LERKTGGLVIWRSGSKIILYRGTDYKYPYFLADKLL-KDSSSEQSSDMDKNESIRSMRGV 2467
            LERKTGGLVIWRSGS IILYRG +YKYPYFL+D  L  DSS + SSD   N      + V
Sbjct: 249  LERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEV 308

Query: 2466 RLPVTNAVESSGLSSDTQASHPPVIQGVGLPNRVRFQLPGEAQLAGEANKLLEGLGPRFN 2287
                   V+S+G     + +   +IQGVG P RVRFQLPGEAQL  EA++LL+GLGPRF 
Sbjct: 309  CSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFT 368

Query: 2286 DWWGYDPLPVDADLLPAVVPGYKRPFRLLPYGIKPVLTNDEMTTLKRLGRPLPCHFALGR 2107
            DWWGYDPLP+DADLLPAVVPGY+RPFRLLPYG+KP LTNDEMT L+RLGRPLPCHFALGR
Sbjct: 369  DWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGR 428

Query: 2106 NRNLQGLAAAIVKLWEKCEIAKIAIKRGVQNTKSELMAEELKWLTGGSLLSRDKEFIVIY 1927
            NR LQGLAA+++KLWEKCEIAKIA+KRGVQNT SE+MAEELK LTGG+LLSRD+EFIV Y
Sbjct: 429  NRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFY 488

Query: 1926 RGKDFLPAAVSSAIEKRRKYGLDVPETRAG--KLSIGKEKGHRDETKDYASEAENDEEND 1753
            RGKDFLP AVSSAIE RRKYG+   + +    +L+I  E+     T ++AS+ + D  +D
Sbjct: 489  RGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELG-TSEHASDKDCDGTDD 547

Query: 1752 RKLRSHSETREVRFSEAAIQRTSTKLSMXXXXXXXXXXXXXXXXKIQIPQEPAIDKEGIT 1573
            +K  S S+ R +R +EA ++RT+ KLSM                + QIPQ+P IDKEGIT
Sbjct: 548  QKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGIT 607

Query: 1572 EEERFMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGKRSIEEVHGVAR 1393
            EEER+MLRKVGLRMK FLLLGRRG+FDGTVENMHLHWKYRELVK+    RSIE++HGVAR
Sbjct: 608  EEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVAR 667

Query: 1392 TLEAESGGILVAVEPVSKGYAIIVYRGKNYKRPASLRPQTLLSKKEAMKRSLEAQRRKSL 1213
            TLEAESGGILVAVE VSKGYAII+YRGKNYKRPASLRPQTLL+K+EA+KRSLEAQRR+SL
Sbjct: 668  TLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESL 727

Query: 1212 KLHVLKLSQHIDELKLKMAT---DEDKNDIQLTKAMKAGSVDQEINETHYNDDEV---SH 1051
            KLHVL+L+++IDELK ++ +   D++ N  QL    +       +    Y  D +   S 
Sbjct: 728  KLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRL-----HLARERYGADVILIHSS 782

Query: 1050 DEPESDRESYFQDPANEAGEPHGPDAXXXXXXXXXXXXXXXXXXXRQKLPGVVSSGSASN 871
            D  +S R+S  Q   N+                            R   P +  S +   
Sbjct: 783  DGMDSSRDS-LQTSHND---------------------------KRIDFPSMCDSDT--- 811

Query: 870  NIYLFEKTEAEVQPKSLPQETKGFINTHEQSKNVGRSGDRTHSSPPICSQSQSG------ 709
                 ++   E   +S+ +E +  + T     ++   G+ T  S  + SQ ++       
Sbjct: 812  -----DEANPEPSSESVLKEIETNVLT-----DMNEEGECTTCSEDLVSQGETSCYAIVN 861

Query: 708  ---NREHNVRDHQNAEIETSVQKVVIERPPVMPFRAFHLSNRERLLLRKQALKIKRPPVL 538
                 E +V+  +N E +  VQ+ V  R   MPFRA  LSNRERLLLRKQAL++K+ PV+
Sbjct: 862  HEETMESSVKSSKN-EFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVI 920

Query: 537  AVGKSNLISGLGKAIKEHFKKHPIVIVNIKGRAKGTSAREVIYNLQQATGAFLVSQEPSK 358
            AVG+SN+++G+ K IK HF+KHP+ IVN+KGRAKGTS +EVI+ L+QATGA LVSQEPSK
Sbjct: 921  AVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSK 980

Query: 357  VILYRGWGSGIET--------AEAKRGSVGREVEAQPLISPELISAIRLECGLKS 217
            VILYRGWG+  E         ++A++ S GRE   +P +SPEL +AIRLECGLKS
Sbjct: 981  VILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAIRLECGLKS 1035


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score = 1005 bits (2598), Expect = 0.0
 Identities = 572/1038 (55%), Positives = 708/1038 (68%), Gaps = 24/1038 (2%)
 Frame = -2

Query: 3345 MLVPLCNCNRHFSFLPSRTLQKPLCQIPICNHPKFPIKSCHRRVS-ISAAAVEAGSQALP 3169
            ML+ LC   RH S  PS T        P    P    K+ + + S     A    +Q LP
Sbjct: 25   MLLTLC---RHHSPFPSPT--PTFTSSPPSISPS-TFKTLNPKPSKFILRASNPDAQTLP 78

Query: 3168 QSAIKRIAEKLRSLGYVXXXXXSNGEDEGLIGGPNSP-----GEIFMPLPSRLPKRQVGH 3004
            ++AI+RIAEKLRSLGYV      +G++   +   + P     GEIF+PLP++LPK +VGH
Sbjct: 79   KTAIQRIAEKLRSLGYV------DGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGH 132

Query: 3003 TLDQSWSTPENPVPQPGSGNAIQRFHELRRGVLXXXXXXXXXXXXXXESAPSLAELKLPA 2824
            T+DQSWS PENPVP+PG+G  I RFHELR+ V               E AP+LAEL LP 
Sbjct: 133  TIDQSWSLPENPVPEPGTGGVITRFHELRKEV----KREKKLVRKEDERAPTLAELTLPE 188

Query: 2823 EELRRLRTEGIALKQKLKVGKAGITEGIVNGIHERWRRSELVKIACEDLCRLNMKRTHDL 2644
            EELRRL+  GI +++KLKVGKAGITEGIVNGIHERWRR+E+VKI CED+C+LNMKRTHD+
Sbjct: 189  EELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDI 248

Query: 2643 LERKTGGLVIWRSGSKIILYRGTDYKYPYFLADKLL-KDSSSEQSSDMDKNESIRSMRGV 2467
            LERKTGGLVIWRSGS IILYRG +YKYPYFL+D  L  DSS + SSD   N      + V
Sbjct: 249  LERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEV 308

Query: 2466 RLPVTNAVESSGLSSDTQASHPPVIQGVGLPNRVRFQLPGEAQLAGEANKLLEGLGPRFN 2287
                   V+S+G     + +   +IQGVG P RVRFQLPGEAQL  EA++LL+GLGPRF 
Sbjct: 309  CSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFT 368

Query: 2286 DWWGYDPLPVDADLLPAVVPGYKRPFRLLPYGIKPVLTNDEMTTLKRLGRPLPCHFALGR 2107
            DWWGYDPLP+DADLLPAVVPGY+RPFRLLPYG+KP LTNDEMT L+RLGRPLPCHFALGR
Sbjct: 369  DWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGR 428

Query: 2106 NRNLQGLAAAIVKLWEKCEIAKIAIKRGVQNTKSELMAEELKWLTGGSLLSRDKEFIVIY 1927
            NR LQGLAA+++KLWEKCEIAKIA+KRGVQNT SE+MAEELK LTGG+LLSRD+EFIV Y
Sbjct: 429  NRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFY 488

Query: 1926 RGKDFLPAAVSSAIEKRRKYGLDVPETRAG--KLSIGKEKGHRDETKDYASEAENDEEND 1753
            RGKDFLP AVSSAIE RRKYG+   + +    +L+I  E+     T ++AS+ + D  +D
Sbjct: 489  RGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELG-TSEHASDKDCDGTDD 547

Query: 1752 RKLRSHSETREVRFSEAAIQRTSTKLSMXXXXXXXXXXXXXXXXKIQIPQEPAIDKEGIT 1573
            +K  S S+ R +R +EA ++RT+ KLSM                + QIPQ+P IDKEGIT
Sbjct: 548  QKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGIT 607

Query: 1572 EEERFMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGKRSIEEVHGVAR 1393
            EEER+MLRKVGLRMK FLLLGRRG+FDGTVENMHLHWKYRELVK+    RSIE++HGVAR
Sbjct: 608  EEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVAR 667

Query: 1392 TLEAESGGILVAVEPVSKGYAIIVYRGKNYKRPASLRPQTLLSKKEAMKRSLEAQRRKSL 1213
            TLEAESGGILVAVE VSKGYAII+YRGKNYKRPASLRPQTLL+K+EA+KRSLEAQRR+SL
Sbjct: 668  TLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESL 727

Query: 1212 KLHVLKLSQHIDELKLKMAT---DEDKNDIQLTKAMKAGSVDQEINETHYNDDEV---SH 1051
            KLHVL+L+++IDELK ++ +   D++ N  QL    +       +    Y  D +   S 
Sbjct: 728  KLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRL-----HLARERYGADVILIHSS 782

Query: 1050 DEPESDRESYFQDPANEAGEPHGPDAXXXXXXXXXXXXXXXXXXXRQKLPGVVSSGSASN 871
            D  +S R+S  Q   N+                            R   P +  S +   
Sbjct: 783  DGMDSSRDS-LQTSHND---------------------------KRIDFPSMCDSDT--- 811

Query: 870  NIYLFEKTEAEVQPKSLPQETKGFINTHEQSKNVGRSGDRTHSSPPICSQSQSG------ 709
                 ++   E   +S+ +E +  + T     ++   G+ T  S  + SQ ++       
Sbjct: 812  -----DEANPEPSSESVLKEIETNVLT-----DMNEEGECTTCSEDLVSQGETSCYAIVN 861

Query: 708  ---NREHNVRDHQNAEIETSVQKVVIERPPVMPFRAFHLSNRERLLLRKQALKIKRPPVL 538
                 E +V+  +N E +  VQ+ V  R   MPFRA  LSNRERLLLRKQAL++K+ PV+
Sbjct: 862  HEETMESSVKSSKN-EFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVI 920

Query: 537  AVGKSNLISGLGKAIKEHFKKHPIVIVNIKGRAKGTSAREVIYNLQQATGAFLVSQEPSK 358
            AVG+SN+++G+ K IK HF+KHP+ IVN+KGRAKGTS +EVI+ L+QATGA LVSQEPSK
Sbjct: 921  AVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSK 980

Query: 357  VILYRGWGSGIETAEAKR 304
            VILYRGWG+  E   + R
Sbjct: 981  VILYRGWGAREENGRSYR 998


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  949 bits (2453), Expect = 0.0
 Identities = 546/1071 (50%), Positives = 705/1071 (65%), Gaps = 33/1071 (3%)
 Frame = -2

Query: 3333 LCNCNRHFSFLP-SRTLQKPLCQIPICNHPKF---PIKSCHRRVSISAAAVEAGSQALPQ 3166
            + N +  F+F P +     P    P   HP     P KS   R  +   +++  S+ LP+
Sbjct: 1    MLNTHSSFTFQPLTDQFPSPFTFFPSHFHPTLISRPPKSS--RFLLRCCSID--SETLPK 56

Query: 3165 SAIKRIAEKLRSLGYVXXXXXSNGEDEGLIGGPNSPGEIFMPLPSRLPKRQVGHTLDQSW 2986
            SAI+RIA+KLRSLG+         +       P++PG IF+PLP++LPK +VGHT+D SW
Sbjct: 57   SAIQRIADKLRSLGFTESPPEPLPDPNS----PSAPGAIFVPLPNQLPKYRVGHTIDSSW 112

Query: 2985 STPENPVPQPGSGNAIQRFHELRRGVLXXXXXXXXXXXXXXESAPSLAELKLPAEELRRL 2806
            S PENPVP+PG+G AI+RFHELR  V               E APSLAEL L  EEL RL
Sbjct: 113  SMPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRL 172

Query: 2805 RTEGIALKQKLKVGKAGITEGIVNGIHERWRRSELVKIACEDLCRLNMKRTHDLLERKTG 2626
            RT GI LK+KL VGKAGITEGIVN IHE WRRSE+VKIACEDLCRLNMKRTHDLLERKTG
Sbjct: 173  RTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTG 232

Query: 2625 GLVIWRSGSKIILYRGTDYKYPYFLADKLLKDSSSEQSSDMDKNESIRSMRGVRLPVTNA 2446
            G+V+WRSGSKIILYRG +Y YPYF  + L  + S +       ++   S     L   N 
Sbjct: 233  GIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLSCIND 292

Query: 2445 VESSGLSSDTQASHPPVIQGVGLPNRVRFQLPGEAQLAGEANKLLEGLGPRFNDWWGYDP 2266
              S+G +S  +   P +IQGVG PNRVRFQLPGEA+LA +A  LLEGLGPRF+DWWGYDP
Sbjct: 293  ERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDP 352

Query: 2265 LPVDADLLPAVVPGYKRPFRLLPYGIKPVLTNDEMTTLKRLGRPLPCHFALGRNRNLQGL 2086
            LPVDADLLPA+VPGY++PFRLLPYG+KP LTNDEMT+L+RL RPLPCHFALGRNR LQGL
Sbjct: 353  LPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGL 412

Query: 2085 AAAIVKLWEKCEIAKIAIKRGVQNTKSELMAEELKWLTGGSLLSRDKEFIVIYRGKDFLP 1906
            AA+I++LWEKCEIAKIA+KRGVQNT ++LMAEEL+ LTGG+LLSRD+EFIV+YRGKDFLP
Sbjct: 413  AASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLP 472

Query: 1905 AAVSSAIEKRRKYGL-DVPETRAGKLSIGKEKGHRDETKDYASEAENDEENDRKLRSHSE 1729
             AVSSA+E++R   L ++ +T     + G  +G + E  +     E+      K +  SE
Sbjct: 473  FAVSSAMEQKRHMRLHEMKQTDNSPATTG--QGLKLEINENGPTNESQSITGWK-KIVSE 529

Query: 1728 TREVRFSEAAIQRTSTKLSMXXXXXXXXXXXXXXXXKIQIPQEPAIDKEGITEEERFMLR 1549
             R++  SE ++++TS KLS+                + +  Q+P IDKEGIT EER+ML+
Sbjct: 530  RRKLMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLK 589

Query: 1548 KVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGKRSIEEVHGVARTLEAESGG 1369
            KVGLRMK FLLLGRRGVFDGTVENMHLHWKYRELVK+   +RS + VH VARTLEAESGG
Sbjct: 590  KVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGG 649

Query: 1368 ILVAVEPVSKGYAIIVYRGKNYKRPASLRPQTLLSKKEAMKRSLEAQRRKSLKLHVLKLS 1189
            ILVAVE V + +AII++RGKNYKRP+ LRP++LL+KKEA+KRS+EAQRRKSLKLHVLKL+
Sbjct: 650  ILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLT 709

Query: 1188 QHIDELKLKMATDEDKNDIQLTKAMKAGSVDQ------EINETH-----YNDDEVSHDEP 1042
            Q+++ELKLK+  DEDK  I + +++K  +  Q      EI  T       +   ++H E 
Sbjct: 710  QNVEELKLKL--DEDKRAIGM-ESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAEN 766

Query: 1041 ESDRESYFQDPANEAGEPHGPDAXXXXXXXXXXXXXXXXXXXRQKLPGVVSSGSASNNIY 862
             +  E   ++   +  + HG  +                      L   V+    +N+++
Sbjct: 767  STCLE---ENEVAKVKKGHGTHSSGTIC-----------------LDTSVNRLQTTNDVF 806

Query: 861  LF---EKTEAEVQPK----------SLPQETKGFINTHEQSKNV----GRSGDRTHSSPP 733
            L    +++ A V+P            +P +T     T E         G S   T  +  
Sbjct: 807  LIHNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVH 866

Query: 732  ICSQSQSGNREHNVRDHQNAEIETSVQKVVIERPPVMPFRAFHLSNRERLLLRKQALKIK 553
              + ++       + + ++  + +S +   I +P   P     LSN+ERLLLR+QALK+K
Sbjct: 867  HVAMNKDTKPSVRLEEEKSPPLLSSTR---INQPGYFPANVPQLSNKERLLLRRQALKMK 923

Query: 552  RPPVLAVGKSNLISGLGKAIKEHFKKHPIVIVNIKGRAKGTSAREVIYNLQQATGAFLVS 373
            + PVL+VGKSN+I+G+ KAIKEHFKKH + IVN+KGRAKGTS +E+++ L+QATGA LVS
Sbjct: 924  KLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVS 983

Query: 372  QEPSKVILYRGWGSGIETAEAKRGSVGREVEAQPLISPELISAIRLECGLK 220
            QEPSKVILYRGW    E  + K   +    E +  +S EL++AIR+ECGL+
Sbjct: 984  QEPSKVILYRGWEE--EDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1032


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  944 bits (2439), Expect = 0.0
 Identities = 535/1018 (52%), Positives = 685/1018 (67%), Gaps = 30/1018 (2%)
 Frame = -2

Query: 3183 SQALPQSAIKRIAEKLRSLGYVXXXXXSNGEDEGLIGGPNSPGEIFMPLPSRLPKRQVGH 3004
            S+ LP+SAI+RIA+KLRSLG+      +  +       P++PG IF+PLP++LPK +VGH
Sbjct: 71   SETLPKSAIQRIADKLRSLGFTEXTPRTLPDPNS----PSAPGAIFVPLPNQLPKYRVGH 126

Query: 3003 TLDQSWSTPENPVPQPGSGNAIQRFHELRRGVLXXXXXXXXXXXXXXESAPSLAELKLPA 2824
            T+D SWSTPENPVP+PG+G AI+RFHELR  V               E APSLAEL L  
Sbjct: 127  TIDSSWSTPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTE 186

Query: 2823 EELRRLRTEGIALKQKLKVGKAGITEGIVNGIHERWRRSELVKIACEDLCRLNMKRTHDL 2644
            EEL RLRT GI LK+KL VGKAGITEGIVN IHE WRRSE+VKIACEDLCRLNMKRTHDL
Sbjct: 187  EELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDL 246

Query: 2643 LERKTGGLVIWRSGSKIILYRGTDYKYPYFLADKLLKDSSSEQSSDMDKNESIRSMRGVR 2464
            LERKTGG+V+WRSGSKIILYRG +Y YPYF  + L  + S +       ++   S     
Sbjct: 247  LERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETEST 306

Query: 2463 LPVTNAVESSGLSSDTQASHPPVIQGVGLPNRVRFQLPGEAQLAGEANKLLEGLGPRFND 2284
            L   N   S+G +S  +   P +IQGVG PNRVRFQLPGEA+LA +A  LLEGLGPRF+D
Sbjct: 307  LSCINDERSAGPTSYVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSD 366

Query: 2283 WWGYDPLPVDADLLPAVVPGYKRPFRLLPYGIKPVLTNDEMTTLKRLGRPLPCHFALGRN 2104
            WWGYDPLPVDADLLPA+VPGY++PFRLLPYG+KP LTNDEMT+L+RL RPLPCHFALGRN
Sbjct: 367  WWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRN 426

Query: 2103 RNLQGLAAAIVKLWEKCEIAKIAIKRGVQNTKSELMAEELKWLTGGSLLSRDKEFIVIYR 1924
            R LQGLAA+I++LWEKCEIAKIA+KRGVQNT ++LMAEEL+ LTGG+LLSRD+EFIV+YR
Sbjct: 427  RKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYR 486

Query: 1923 GKDFLPAAVSSAIEKRRKYGL-DVPETRAGKLSIGKEKGHRDETKDYASEAENDEENDRK 1747
            GKDFLP AVSSA+E++R   L ++ +T     + G  +G + E  +     E+      K
Sbjct: 487  GKDFLPFAVSSAMEQKRHMRLHEMKQTDNSPATTG--QGLKLEINENGPTNESQSITGWK 544

Query: 1746 LRSHSETREVRFSEAAIQRTSTKLSMXXXXXXXXXXXXXXXXKIQIP-QEPAIDKEGITE 1570
             +  SE R++  SE ++++TS KLS+                + +   Q+P IDKEGIT 
Sbjct: 545  -KIVSERRKLMSSETSMRKTSIKLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITV 603

Query: 1569 EERFMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGKRSIEEVHGVART 1390
            EER+ML+KVGLRMK FLLLGRRGVFDGTVENMHLHWKYRELVK+   +RS + VH VART
Sbjct: 604  EERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVART 663

Query: 1389 LEAESGGILVAVEPVSKGYAIIVYRGKNYKRPASLRPQTLLSKKEAMKRSLEAQRRKSLK 1210
            LEAESGGILVAVE V + +AII++RGKNYKRP+ LRP++LL+KKEA+KRS+EAQRRKSLK
Sbjct: 664  LEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLK 723

Query: 1209 LHVLKLSQHIDELKLKMATDEDKNDIQLTKAMKAGSVDQEINETHYNDDEVSHDEPESDR 1030
            LHVLKL+Q+++ELKLK+  DEDK  I +          + I  + +   +   DE ++  
Sbjct: 724  LHVLKLTQNVEELKLKL--DEDKRAIGM----------ESIKTSTFQPGKEGIDEIQT-- 769

Query: 1029 ESYFQDPANEAGEPHGPDAXXXXXXXXXXXXXXXXXXXRQKLPGVVSSGS---------- 880
                +  A+ A   H  ++                    +K  G  SSG+          
Sbjct: 770  TGSLKLVADSACLTHAENS---------TCLEENEVAKVKKGHGTHSSGTICLDTSVNRL 820

Query: 879  -ASNNIYLF---EKTEAEVQPK----------SLPQETKGFINTHEQSKNV----GRSGD 754
              +N+++L    +++ A V+P            +P +T     T E         G S  
Sbjct: 821  QTTNDVFLIHNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNS 880

Query: 753  RTHSSPPICSQSQSGNREHNVRDHQNAEIETSVQKVVIERPPVMPFRAFHLSNRERLLLR 574
             T  +    + ++       + + ++  + +S +   I +P   P     LSN+ERLLLR
Sbjct: 881  GTSDAVHHVAMNKDTKPSVRLEEEKSPPLLSSTR---INQPGYFPANVPQLSNKERLLLR 937

Query: 573  KQALKIKRPPVLAVGKSNLISGLGKAIKEHFKKHPIVIVNIKGRAKGTSAREVIYNLQQA 394
            +QALK+K+ PVL+VGKSN+I+G+ KAIKEHFKKH + IVN+KGRAKGTS +E+++ L+QA
Sbjct: 938  RQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQA 997

Query: 393  TGAFLVSQEPSKVILYRGWGSGIETAEAKRGSVGREVEAQPLISPELISAIRLECGLK 220
            TGA LVSQEPSKVILYRGW    E  + K   +    E +  +S EL++AIR+ECGL+
Sbjct: 998  TGAVLVSQEPSKVILYRGWEE--EDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1053


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score =  929 bits (2402), Expect = 0.0
 Identities = 535/1019 (52%), Positives = 657/1019 (64%), Gaps = 30/1019 (2%)
 Frame = -2

Query: 3189 AGSQALPQSAIKRIAEKLRSLGYVXXXXXS-----NGEDEGLIGGPNSPGEIFMPLPSRL 3025
            +G + LPQSAI+RIAEKLRSLG+V     S      GE+ G     NSPGEIF+PLP +L
Sbjct: 50   SGRKTLPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESG----KNSPGEIFVPLPKQL 105

Query: 3024 PKRQVGHTLDQSWSTPENPVPQPGSGNAIQRFHELRRGVLXXXXXXXXXXXXXXESAPSL 2845
            P  +VGHT+D SWSTP  PVP+PGSG AI R+HEL+R                 E  PSL
Sbjct: 106  PIHRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKR----VWKKETEMERKKEEKVPSL 161

Query: 2844 AELKLPAEELRRLRTEGIALKQKLKVGKAGITEGIVNGIHERWRRSELVKIACEDLCRLN 2665
            AEL LP  ELRRLRT GI L +KLK+GKAGITEGIVNGIHERWR +E+VKI CED+ R+N
Sbjct: 162  AELTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMN 221

Query: 2664 MKRTHDLLERKTGGLVIWRSGSKIILYRGTDYKYPYFLADKLLKDSSSEQSSDMDKNE-S 2488
            MKRTHD+LE KTGGLVIWRSGSKI+LYRG +Y+YPYF++D+ L   ++  +S MD+    
Sbjct: 222  MKRTHDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVD 281

Query: 2487 IRSMRGVRLPVTNAVESSGLSSDTQASHPPVIQGVGLPNRVRFQLPGEAQLAGEANKLLE 2308
             R  + +        ESS  S   +   P + QGVG P++VRFQLPGE QL  EA++LLE
Sbjct: 282  SREKQSI-------AESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLE 334

Query: 2307 GLGPRFNDWWGYDPLPVDADLLPAVVPGYKRPFRLLPYGIKPVLTNDEMTTLKRLGRPLP 2128
            GLGPRF DWW YDPLPVD DLLPAVVP Y+RPFRLLPYG+ P LT+DEMTT++RLGRPLP
Sbjct: 335  GLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLP 394

Query: 2127 CHFALGRNRNLQGLAAAIVKLWEKCEIAKIAIKRGVQNTKSELMAEELKWLTGGSLLSRD 1948
            CHFALGRNRNLQGLA AIVKLWEKCE+AKIA+KRGVQNT SELMAEELKWLTGG+L+SRD
Sbjct: 395  CHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRD 454

Query: 1947 KEFIVIYRGKDFLPAAVSSAIEKRRKYG--LDVPETRAGKLSIGKEKGHRDETKDYASEA 1774
            K+FIV+YRGKDFLP+AVSSAIE+RR+    ++       KL+  +E+      K+   E 
Sbjct: 455  KDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKE-DIEL 513

Query: 1773 ENDEENDRKLRSHSETREVRFSEAAIQRTSTKLSMXXXXXXXXXXXXXXXXKIQIPQEPA 1594
            E  ++ D       ++R+    EA +++TS KLSM                  + PQ   
Sbjct: 514  EAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSD 573

Query: 1593 IDKEGITEEERFMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGKRSIE 1414
            IDKEGIT +E++MLRK+GL+MK FLLLGRRGVFDGT+ENMHLHWKYRELVK+   + SIE
Sbjct: 574  IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIE 633

Query: 1413 EVHGVARTLEAESGGILVAVEPVSKGYAIIVYRGKNYKRPASLRPQTLLSKKEAMKRSLE 1234
              H VA  LEAESGGILVAVE VSKGYAIIVYRGKNY+RP  LRPQTLLSK+EA+KRS+E
Sbjct: 634  AAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVE 693

Query: 1233 AQRRKSLKLHVLKLSQHIDELKLKMATDEDKNDIQLTKAMKAGSVDQEINETHYNDDEVS 1054
            AQRRKSLKLHVLKLS +I+EL  ++  D   N+          S  +  N     + E  
Sbjct: 694  AQRRKSLKLHVLKLSNNIEELNRQLVEDSATNE--------TWSDGESSNMMVEEETENQ 745

Query: 1053 HDEPESDRE----SYFQD-PANEAGEPHGPDAXXXXXXXXXXXXXXXXXXXRQKLPGVVS 889
            H EPE  RE     Y  D     +GE +  D                     +       
Sbjct: 746  HTEPEKAREKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQEYQEDESESASSQRH 805

Query: 888  SGS---ASNNIYLFEKT----EAEVQPKSLPQETKGFINTHEQSKNVGRSGDRTHSSPPI 730
             G+   ++ N+ +F +T     +    +SLP  +  F+N + +       G  T S   I
Sbjct: 806  EGNSLDSTANLSVFAETGSANASSFHDRSLPHNS--FLNANRK-----LPGSSTGSGSQI 858

Query: 729  CSQSQSGNREHNVRDHQNAEIETSVQKVVIERPPVMPFRAFHLSNRERLLLRKQALKIKR 550
                 S  RE   R  +N  + T                   LSNRERL+LRKQALK+K+
Sbjct: 859  -----SALRE---RKSENDGLVTD------------------LSNRERLILRKQALKMKK 892

Query: 549  PPVLAVGKSNLISGLGKAIKEHFKKHPIVIVNIKGRAKGTSAREVIYNLQQATGAFLVSQ 370
             P  AVG+SN+++GL + +K HF+K+P+ IVN+KGRA GTS +EVI  L++ TGA LVSQ
Sbjct: 893  RPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQ 952

Query: 369  EPSKVILYRGWGSGIE----------TAEAKRGSVGREVEAQPLISPELISAIRLECGL 223
            EPSKVILYRGWG+  E           +     S    V+  P +SP LI AIRLECGL
Sbjct: 953  EPSKVILYRGWGAEEEMKSFYPNNNVKSSINLPSTRSFVDDPPHVSPALIEAIRLECGL 1011