BLASTX nr result

ID: Scutellaria23_contig00001624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001624
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   342   9e-92
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  341   2e-91
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   341   2e-91
ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, pu...   332   9e-89
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   330   3e-88

>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  342 bits (877), Expect = 9e-92
 Identities = 160/187 (85%), Positives = 169/187 (90%)
 Frame = +1

Query: 70  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 249
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 250 GVDAQGHPIDPKKMQXXXXXXXXXXXXXXSKYGEIESLNVCDNLADHMVGNVYVQFREEE 429
           GVDA GHPIDP+K+Q              SKYG+IESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 430 HAGNALKNLTGRYYAGRPIIVDFSPVTDFREATCRQYEEEACNRGGYCNFMHLKKISREL 609
           HA NA++NLTGR+YAGRPIIVDFSPVTDFREATCRQYEE  CNRGGYCNFMHLK+ISREL
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 610 RRQLFGR 630
           RRQLFG+
Sbjct: 181 RRQLFGK 187


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  341 bits (875), Expect = 2e-91
 Identities = 160/188 (85%), Positives = 169/188 (89%)
 Frame = +1

Query: 70  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 249
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 250 GVDAQGHPIDPKKMQXXXXXXXXXXXXXXSKYGEIESLNVCDNLADHMVGNVYVQFREEE 429
           GVD QG P+DP+K+Q              SKYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 430 HAGNALKNLTGRYYAGRPIIVDFSPVTDFREATCRQYEEEACNRGGYCNFMHLKKISREL 609
           HAG AL+NL+GR+YAGRPIIVDFSPVTDFREATCRQYEE  CNRGGYCNFMHLKKISREL
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 610 RRQLFGRH 633
           RRQLFGR+
Sbjct: 181 RRQLFGRY 188


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  341 bits (874), Expect = 2e-91
 Identities = 160/188 (85%), Positives = 168/188 (89%)
 Frame = +1

Query: 70  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 249
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 250 GVDAQGHPIDPKKMQXXXXXXXXXXXXXXSKYGEIESLNVCDNLADHMVGNVYVQFREEE 429
           GVD QG P+DP+K+Q              SKYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 430 HAGNALKNLTGRYYAGRPIIVDFSPVTDFREATCRQYEEEACNRGGYCNFMHLKKISREL 609
           HA NAL+NL GR+YAGRPIIVDFSPVTDFREATCRQYEE  CNRGGYCNFMHLKKISREL
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180

Query: 610 RRQLFGRH 633
           RRQLFGR+
Sbjct: 181 RRQLFGRN 188


>ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 322

 Score =  332 bits (851), Expect = 9e-89
 Identities = 156/188 (82%), Positives = 167/188 (88%)
 Frame = +1

Query: 70  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 249
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS+SPTLLLSNMYQRPD+ITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDIITP 60

Query: 250 GVDAQGHPIDPKKMQXXXXXXXXXXXXXXSKYGEIESLNVCDNLADHMVGNVYVQFREEE 429
           GVDA G+PIDP+K+Q              SKYGEI+SLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDANGNPIDPRKIQQHFEEFYEDLFQELSKYGEIDSLNVCDNLADHMVGNVYVQFREEE 120

Query: 430 HAGNALKNLTGRYYAGRPIIVDFSPVTDFREATCRQYEEEACNRGGYCNFMHLKKISREL 609
            A NAL+NL+GR+YAGRPII DFSPVTDFREATCRQYEE ACNRGGYCNFMHLK+I REL
Sbjct: 121 DAENALRNLSGRFYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGREL 180

Query: 610 RRQLFGRH 633
           R QLFGR+
Sbjct: 181 RHQLFGRY 188


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 317

 Score =  330 bits (847), Expect = 3e-88
 Identities = 156/187 (83%), Positives = 164/187 (87%)
 Frame = +1

Query: 70  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 249
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 250 GVDAQGHPIDPKKMQXXXXXXXXXXXXXXSKYGEIESLNVCDNLADHMVGNVYVQFREEE 429
           GVD QG  +DP+K+Q              SKYG++ESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 430 HAGNALKNLTGRYYAGRPIIVDFSPVTDFREATCRQYEEEACNRGGYCNFMHLKKISREL 609
            A NAL NL GR+YAGRPIIVDFSPVTDFREATCRQYEE  CNRGGYCNFMHLKKISREL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 610 RRQLFGR 630
           RR+LFGR
Sbjct: 181 RRRLFGR 187


Top