BLASTX nr result

ID: Scutellaria23_contig00001538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001538
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531346.1| structural constituent of ribosome, putative...    64   5e-08
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    62   1e-07
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    62   1e-07
gb|ABR17141.1| unknown [Picea sitchensis] gi|224285069|gb|ACN402...    59   9e-07
gb|ABK23830.1| unknown [Picea sitchensis]                              59   9e-07

>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 31/63 (49%), Positives = 36/63 (57%)
 Frame = -3

Query: 535 YCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGQVVKIEIDE 356
           YCGRGDKKTA+GKRFNHSFGN                          ++DG+VVKI+IDE
Sbjct: 54  YCGRGDKKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGEVVKIDIDE 113

Query: 355 SFS 347
           S S
Sbjct: 114 SLS 116


>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/64 (48%), Positives = 36/64 (56%)
 Frame = -3

Query: 535 YCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGQVVKIEIDE 356
           YCGRGDKKTA+GKRFNHSFGN                         +++D +VVKIEIDE
Sbjct: 55  YCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDE 114

Query: 355 SFSN 344
           S  N
Sbjct: 115 SLFN 118


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/64 (48%), Positives = 36/64 (56%)
 Frame = -3

Query: 535 YCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGQVVKIEIDE 356
           YCGRGDKKTA+GKRFNHSFGN                         +++D +VVKIEIDE
Sbjct: 54  YCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDE 113

Query: 355 SFSN 344
           S  N
Sbjct: 114 SLFN 117


>gb|ABR17141.1| unknown [Picea sitchensis] gi|224285069|gb|ACN40262.1| unknown
           [Picea sitchensis] gi|224287004|gb|ACN41203.1| unknown
           [Picea sitchensis]
          Length = 112

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 28/62 (45%), Positives = 34/62 (54%)
 Frame = -3

Query: 535 YCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGQVVKIEIDE 356
           YCGRGDK+TA+GKRF HSFGN                          +DDG+ ++IEIDE
Sbjct: 49  YCGRGDKRTAKGKRFKHSFGNARPRDNKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDE 108

Query: 355 SF 350
           SF
Sbjct: 109 SF 110


>gb|ABK23830.1| unknown [Picea sitchensis]
          Length = 112

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 28/62 (45%), Positives = 34/62 (54%)
 Frame = -3

Query: 535 YCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGQVVKIEIDE 356
           YCGRGDK+TA+GKRF HSFGN                          +DDG+ ++IEIDE
Sbjct: 49  YCGRGDKRTAKGKRFKHSFGNARPRDNKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDE 108

Query: 355 SF 350
           SF
Sbjct: 109 SF 110


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