BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00001265
         (7416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   689   0.0  
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   645   0.0  
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   575   e-161
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   574   e-160
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   557   e-155

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  689 bits (1777), Expect = 0.0
 Identities = 393/1124 (34%), Positives = 602/1124 (53%), Gaps = 18/1124 (1%)
 Frame = +1

Query: 3550 MKIASWNIRGLKDPNKQADISSWVRSHKLDVVCFLETKI--ESNVCVSSKFCNSMMHLRF 3723
            MKI +WN+RGL DP K  ++  ++ S K+ +    ET++  +++  +  KF N       
Sbjct: 1    MKITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNR------ 54

Query: 3724 PGWLFAHNFHTTNNGRILIIWNPCSVDLSVISCFPQSIHCNVKCLVSQVSFFVSFTYGFY 3903
              W + +N+  +  GRI + W    V+++V+S   Q I   VK       F ++  YG +
Sbjct: 55   --WSWINNYACSPRGRIWVGWLNNDVNINVLSVTEQVITMEVKNSYGLNMFKMAAVYGLH 112

Query: 3904 SVVDRRDMWTNLYDFDNPLLDPWLIMGDFNCVKSPNEKLNGVPLTNYCLSDFQDTCMSLG 4083
            ++ DR+ +W  LY+F +   +P +++GD+N V S  ++LNG  ++    SD +   +   
Sbjct: 113  TIADRKVLWEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQ 172

Query: 4084 LNDVVSTGCFYTWNNS-----KVWERLDRALVNSAWSNSGLFCQADIPPPGHHSDHSPVI 4248
            L +  +TG FY+WNN      ++  R+D++ VN AW N       +    G  SDHSP+I
Sbjct: 173  LLEAPTTGLFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAGI-SDHSPLI 231

Query: 4249 VSLFQNAEKLKKPFRFFNMWSLHPSFLDIVQSSWNLPCWGTHQFIFCXXXXXXXXXXXXX 4428
             +L    ++  +PF+F N  +    F+++V+ +W       H+F                
Sbjct: 232  FNLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGS---ANHRFKM-KNIWVRLQAVKRA 287

Query: 4429 XXXXXXXXXXXXXXXVEALKQNQILLQFDPCNSSLLAQNVSLKNEAVFLSK---AEKLFL 4599
                           VE L++    +Q  P  S +       K+    L K    ++  L
Sbjct: 288  LKSFHSKKFSKAHCQVEELRRKLAAVQALPEVSQVSELQEEEKDLIAQLRKWSTIDESIL 347

Query: 4600 AQKAKCNFLILNDKNTKFFHSIIKRNSLKRQICSISLDNGVKTSSFEQMTDVFLSFYKDL 4779
             QK++  +L L D N+KFF + IK    + +I  +  D G + +   ++ +   +FY+ L
Sbjct: 348  KQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRL 407

Query: 4780 FG-SEMHASHIDYDIVKSGPCISVDNGLMLSAPVLNCEIKDALFDIGDEKAPGPDGYSAA 4956
             G S      ID  +V+ G  +S  +   L  P+   EI  AL DI D KAPG DG+++ 
Sbjct: 408  LGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSV 467

Query: 4957 FFKNAWNVVGDDLCNAVSEFFVNRKLLKQINHTSIALIPKTDHNPTVSDFRPIACCNVIY 5136
            FFK +W V+  ++   + +FF N  + K IN T++ LIPK D      D+RPIACC+ +Y
Sbjct: 468  FFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLY 527

Query: 5137 KVITKIISKRLERVLPDLIDPAQAAFVGGRNITDNIFLAQEIIRNYARKRISPRCTIKVD 5316
            K+I+KI++KRL+ V+ +++D AQ  F+  R+I DNI LA E+IR Y R+ +SPRC IKVD
Sbjct: 528  KIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVD 587

Query: 5317 LRKAYDTVSWSFLREVLIAMNFPSICIEWIMECVTTASFSICINGSLQGLFQGKRGLRQG 5496
            +RKAYD+V W FL  +L  + FPS+ I WIM CV T S+SI +NG     F  ++GLRQG
Sbjct: 588  IRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQG 647

Query: 5497 DPMSPALFVICMEYLSRLLNSRTKCSNFNFHPRCDVLNISHLAFADDLMLFSRGDLISVK 5676
            DP+SP LF + MEYLSR + +  K   FNFHP+C+ + ++HL FADDL++F+R D  S+ 
Sbjct: 648  DPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSIS 707

Query: 5677 ILCDCLSDFKAVSGLNINNSKSCIFTAGIQGQELTDILDTLEYPAGSLPVRYLGVPLAAQ 5856
             +    + F   SGL  +  KSCI+  G+  +E   + D ++ P GSLP RYLGVPLA++
Sbjct: 708  KIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASK 767

Query: 5857 KLNSVHYAPLFDKIASYINCWTANSLSYAGRLQLIQSVLQGVECFWLQAFPLPSSVIDRI 6036
            KLN     PL DKI +    W A+ LSYAGRLQL++++L  ++ +W Q FPLP  +I  +
Sbjct: 768  KLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAV 827

Query: 6037 YKLCRLFLW-----GKKTAPIAWADVCLPKDEGGLGLRDAHSWNKALLAKVLWNLHSKAD 6201
               CR FLW         AP+AW  +  PK  GGL + +   WNKA + K+LW +  K D
Sbjct: 828  ETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQD 887

Query: 6202 SLWVKWVHAFYIKNTNVWDWIPNKNTSPLIKRIFEIRDELYMKLNGKDAVLNFFSKCSNP 6381
             LWV+WV+A+YIK  N+ +   + NTS ++++IFE R EL  +  G +AV       SN 
Sbjct: 888  KLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESR-ELLTRTGGWEAV-------SNH 939

Query: 6382 FGFIPSLIYDVFRKKGEKSFWKAAIWKAFIPPKYSFCTWMAYKGRLATKNNLT--FLQID 6555
              F     Y + ++  E   WK  I      PK  F  W+A   RLAT   ++     + 
Sbjct: 940  MNFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVS 999

Query: 6556 PSCMFCNHPTESCAHLFFECRISKEVWSEVRNWLGLKHSMTTIASALKWCKKEKKHSIHM 6735
            P C  C +  E+  HLFF C  SKE+W +V  +L L+      A      KK +      
Sbjct: 1000 PLCKMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKKARSTKDRN 1059

Query: 6736 KARKIALCCTIFYIWKMRNELVFEGSLPNVKICFEKIKTQVYRV 6867
            K   +    +++ IW +RN  VF G   N     + +K+ ++R+
Sbjct: 1060 KLYVMMFTESVYAIWLLRNAKVFRGIEINQN---QAVKSIIFRI 1100


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  645 bits (1663), Expect = 0.0
 Identities = 376/1109 (33%), Positives = 578/1109 (52%), Gaps = 22/1109 (1%)
 Frame = +1

Query: 3550 MKIASWNIRGLKDPNKQADISSWVRSHKLDVVCFLETKI-ESNVC-VSSKFCNSMMHLRF 3723
            M   SWN+RG+ DP K  +I +++ SHK+ V   LET++ E N   V  K          
Sbjct: 1    MLCVSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKD------ 54

Query: 3724 PGWLFAHNFHTTNNGRILIIWNPCSVDLSVISCFPQSIHCNVKCLVSQVSFFVSFTYGFY 3903
              W + +N+  +   RI I W P  V++++     Q + C+++    ++       YG +
Sbjct: 55   --WKWLNNYSHSARERIWIGWRPAWVNVTLTHTQEQLMVCDIQDQSHKLKMVA--VYGLH 110

Query: 3904 SVVDRRDMWTNLYDFDNPLLDPWLIMGDFNCVKSPNEKLNGVPLTNYCLSDFQDTCMSLG 4083
            ++ DR+ +W+ L        DP +I+GDFN V   N++L G  +T+    DFQ   +   
Sbjct: 111  TIADRKSLWSGLLQCVQQQ-DPMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQSN 169

Query: 4084 LNDVVSTGCFYTWNNS-----KVWERLDRALVNSAWSNSGLFCQADIP--PPGHHSDHSP 4242
            L +  ST  +Y+W+NS     +V  R+D+A VN  W   G++ +  +   PPG  SDHSP
Sbjct: 170  LIESRSTWSYYSWSNSSIGRDRVLSRIDKAYVNLVWL--GMYAEVSVQYLPPGI-SDHSP 226

Query: 4243 VIVSLFQNAEKLKKPFRFFNMWSLHPSFLDIVQSSWNLPCWGTHQFIFCXXXXXXXXXXX 4422
            ++ +L     +  KPF+F N+ +    FL+ V+ +WN                       
Sbjct: 227  LLFNLMTGRPQGGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIWLNLKAVKRELK 286

Query: 4423 XXXXXXXXXXXXXXXXXVEALKQNQILLQFDPCNSSLLAQNVSLKNEAVFLSKAEKLFLA 4602
                                L+  Q    FD  N  +     S+ N+    S  E   L 
Sbjct: 287  QMKTQKIGLAHEKVKNLRHQLQDLQSQDDFDH-NDIMQTDAKSIMNDLRHWSHIEDSILQ 345

Query: 4603 QKAKCNFLILNDKNTKFFHSIIKRNSLKRQICSISLDNGVKTSSFEQMTDVFLSFYKDLF 4782
            QK++  +L   D N+K F + +K      +I  ++ ++G      +++ +  L FYK L 
Sbjct: 346  QKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEFYKKLL 405

Query: 4783 GSEMHA-SHIDYDIVKSGPCISVDNGLMLSAPVLNCEIKDALFDIGDEKAPGPDGYSAAF 4959
            G+       +D + V+ G C+S      L   V + EI +AL  IG++KAPG DG++A F
Sbjct: 406  GTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYF 465

Query: 4960 FKNAWNVVGDDLCNAVSEFFVNRKLLKQINHTSIALIPKTDHNPTVSDFRPIACCNVIYK 5139
            FK +W  +  ++   + EFF N ++ + IN   + L+PK  H   V +FRPIACC VIYK
Sbjct: 466  FKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYK 525

Query: 5140 VITKIISKRLERVLPDLIDPAQAAFVGGRNITDNIFLAQEIIRNYARKRISPRCTIKVDL 5319
            +I+K+++ R++ ++ ++++ AQ+ F+ GR+I DNI LA E+IR Y RK +SPRC +KVD+
Sbjct: 526  IISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDI 585

Query: 5320 RKAYDTVSWSFLREVLIAMNFPSICIEWIMECVTTASFSICINGSLQGLFQGKRGLRQGD 5499
            RKAYD+V WSFL  +L    FPS  + WIMECV+T S+S+ +NG     FQ ++GLRQGD
Sbjct: 586  RKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGD 645

Query: 5500 PMSPALFVICMEYLSRLLNSRTKCSNFNFHPRCDVLNISHLAFADDLMLFSRGDLISVKI 5679
            PMSP LF +CMEYLSR L       +FNFHP+C+ LNI+HL FADDL++F R D  S+  
Sbjct: 646  PMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDH 705

Query: 5680 LCDCLSDFKAVSGLNINNSKSCIFTAGIQGQELTDILDTLEYPAGSLPVRYLGVPLAAQK 5859
            +      F   SGL  ++ KS I+  G+  +   ++ D +    G LP RYLGVPL ++K
Sbjct: 706  MNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKK 765

Query: 5860 LNSVHYAPLFDKIASYINCWTANSLSYAGRLQLIQSVLQGVECFWLQAFPLPSSVIDRIY 6039
            L      PL + I +    W A  LSYAGRLQLI+S+L  ++ +W   FPL   VI  + 
Sbjct: 766  LTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVE 825

Query: 6040 KLCRLFLWGKKT-----APIAWADVCLPKDEGGLGLRDAHSWNKALLAKVLWNLHSKADS 6204
            K+CR FLW  KT     AP+AWA +  PK  GG  + +   WN+A + K+LW +  K D 
Sbjct: 826  KVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDK 885

Query: 6205 LWVKWVHAFYIKNTNVWDWIPNKNTSPLIKRIFEIRDELYMKLNGKDAVLNFFSKCSNPF 6384
            LWV+W+H++YIK  ++     +  T+ ++++I + RD L        + +  + +     
Sbjct: 886  LWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHL--------SNIGDWDEICIGD 937

Query: 6385 GFIPSLIYDVFRKKGEKSFWKAAIWKAFIPPKYSFCTWMAYKGRLATKNNLT--FLQIDP 6558
             F     Y    + GE+  W+  I   +  PK  F  WM    RL T + ++   +Q D 
Sbjct: 938  KFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDL 997

Query: 6559 SCMFCNHPTESCAHLFFECRISKEVWSEVRNWL-----GLKHSMTTIASALKWCKKEKKH 6723
            +   C +  E+  HLFF C  S  VWS++   +     G+ H    I+S     +K+K  
Sbjct: 998  NYRLCRNDGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSH-QEIISSVCGQARKKKGK 1056

Query: 6724 SIHMKARKIALCCTIFYIWKMRNELVFEG 6810
             I M   +      ++ IWK RN+  F G
Sbjct: 1057 LIVMLYTEF-----VYAIWKQRNKRTFTG 1080


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  575 bits (1483), Expect = e-161
 Identities = 347/1117 (31%), Positives = 563/1117 (50%), Gaps = 13/1117 (1%)
 Frame = +1

Query: 3553 KIASWNIRGLKDPNKQADISSWVRSHKLDVVCFLETKIESNVCVSSKFCNSMMHLRFPGW 3732
            K A    + ++   K  +ISS +   +  +   +ET++++      +    + H      
Sbjct: 342  KAARHTCKAIEVIGKLKEISSRLLKLRPTIAILIETRVKNKNAKKIRDKLKLPHN----- 396

Query: 3733 LFAHNFHTTNNGRILIIWNPCSVDLSVISCFPQSIHCNVKCLVSQVSFFVSFTYGFYSVV 3912
             +  N+   +NGR+ I W+   +D+  + C  Q +H  V  L  +  F+++  Y    + 
Sbjct: 397  -YLDNYKWHDNGRLWIEWDNSKIDVRHVKCSSQYVHVGVYNLQGEFKFWLTAVYALNQLD 455

Query: 3913 DRRDMWTNLYDFDNPLLDPWLIMGDFNCVKSPNEKLNGVPLTNYCLSDFQDTCMSLGLND 4092
             R+ +W +L         PW ++GDFN V    +++ G  +T     D  +   +  L +
Sbjct: 456  RRKVLWKDLEAIHKHQQGPWCVIGDFNNVTKAQDRIGGKAVTESEYIDLLNMMETTCLAE 515

Query: 4093 VVSTGCFYTWNNSKV----WERLDRALVNSAWSNSGLFCQADIPPPGHHSDHSPVIVSLF 4260
            + +TG FYTW N +V    + R+DR L N  W    L     + P    SDH+ + VS  
Sbjct: 516  MDTTGEFYTWTNKQVIGTIYSRIDRVLGNLNWFQDNLDTVLTVLPTSV-SDHALLCVSRK 574

Query: 4261 QNAEKLKKPFRFFNMWSLHPSFLDIVQSSWNLPCWGTHQFIFCXXXXXXXXXXXXXXXXX 4440
                K  K FRF N       + D+V++SW+ P  G+   +                   
Sbjct: 575  DPIIKNNKNFRFSNCLIEMEGYNDMVKASWSRPTRGS-PMVRLWNKLKRLQQDMRRFSKP 633

Query: 4441 XXXXXXXXXXXVEALKQNQILLQFDPCNSSLLAQNVSLKNEAVFLSKAEKLFLAQKAKCN 4620
                        E L+  Q  L+ +  N   + +   L  E + L++ E+  L Q+AK +
Sbjct: 634  LSNLKQNLIKAREDLQFAQENLRNNNMNGDRIDRVRQLTEEVINLNELEEKMLMQRAKVD 693

Query: 4621 FLILNDKNTKFFHSIIKRNSLKRQICSISLDNGVKTSSFEQMTDVFLSFYKDLFGSE-MH 4797
            ++   D N  F                    +G    +  ++ D  + FYK L G+E   
Sbjct: 694  WIRKGDGNNSF------------------KTDGTLLENQSEIEDEIMDFYKKLMGTEDSQ 735

Query: 4798 ASHIDYDIVKSGPCISVDNGLMLSAPVLNCEIKDALFDIGDEKAPGPDGYSAAFFKNAWN 4977
              HID D +++G  ++++    L + +   +I+ AL  IGD+K+PG DG+ A FFK +W 
Sbjct: 736  LHHIDIDAMRNGKQVNMEQRRYLVSNITEQDIERALKGIGDDKSPGIDGFGAKFFKASWC 795

Query: 4978 VVGDDLCNAVSEFFVNRKLLKQINHTSIALIPKTDHNPTVSDFRPIACCNVIYKVITKII 5157
            +V +D+   + EFF   +L +  N+T + LIPK D+   V D+RPIA C  +YK+I KII
Sbjct: 796  IVKEDVIAVILEFFNIGRLYRGFNNTVVTLIPKGDNARYVKDYRPIAGCTTVYKIIAKII 855

Query: 5158 SKRLERVLPDLIDPAQAAFVGGRNITDNIFLAQEIIRNYARKRISPRCTIKVDLRKAYDT 5337
            ++RL ++LP +I  +QAAFV G+NI ++I LA E++  Y RK  +PR  +++DL KAYD 
Sbjct: 856  TERLGKILPSIISHSQAAFVPGQNIHNHILLAYELLNGYGRKGGTPRVMMQLDLHKAYDM 915

Query: 5338 VSWSFLREVLIAMNFPSICIEWIMECVTTASFSICINGSLQGLFQGKRGLRQGDPMSPAL 5517
            V+W  +  +L  +  P   + WIM  V+T S+   +NG+   + Q KRG+RQGDPMSP L
Sbjct: 916  VNWRAMECILKEIGLPMQFVSWIMTGVSTVSYRFNVNGTYYDIMQAKRGIRQGDPMSPML 975

Query: 5518 FVICMEYLSRLLNSRTKCSNFNFHPRCDVLNISHLAFADDLMLFSRGDLISVKILCDCLS 5697
            FVI MEYL R L    +  +FN H +C+ + +++L FADD++LF RGD  SV ++ + + 
Sbjct: 976  FVIIMEYLHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIR 1035

Query: 5698 DFKAVSGLNINNSKSCIFTAGIQGQELTDILDTLEYPAGSLPVRYLGVPLAAQKLNSVHY 5877
             F   +GL +N +K  +F  G+ G    ++    ++  G LPVRYLGVPL+ ++L    Y
Sbjct: 1036 KFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYLGVPLSCKRLTIQQY 1095

Query: 5878 APLFDKIASYINCWTANSLSYAGRLQLIQSVLQGVECFWLQAFPLPSSVIDRIYKLCRLF 6057
             PL DKI   +  WT+  LSYAGR+QL++S+   +  +W+Q FPLP  V+ +I  +CR F
Sbjct: 1096 MPLIDKIVDRVKHWTSKLLSYAGRIQLVKSITSAIAMYWMQCFPLPQFVLRKINAICRSF 1155

Query: 6058 LW-GK----KTAPIAWADVCLPKDEGGLGLRDAHSWNKALLAKVLWNLHSKADSLWVKWV 6222
            +W GK    K + +AW  +C  K +GG+G+ +   WN   L K LWN+   +++LWV WV
Sbjct: 1156 VWTGKQEISKKSLVAWDTMCRNKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVLWV 1215

Query: 6223 HAFYIKNTNVWDWIPNKNTSPLIKRIFEIRDELYMKLNGKDAVLNFFSKCSNPFGFIPSL 6402
            H +Y+K  +        N+S ++K I + R +L         +   + +  +   F  S 
Sbjct: 1216 HTYYLKGNDAITAFVRPNSSWILKNIMKQRHKL-------GQIQQHWDQALSRQKFPMSA 1268

Query: 6403 IYDVFRKKGEKSFWKAAIWKAFIPPKYSFCTWMAYKGRLATKNNL-TFLQIDPS-CMFCN 6576
            +Y    ++ ++  W++ +      P+   C W+A   +L+TK+ L  F  I  S C  CN
Sbjct: 1269 MYHGLTEEHQRVSWRSVMCGNKARPRAVICLWLACHKKLSTKDRLRRFGMIQSSDCSICN 1328

Query: 6577 HPTESCAHLFFECRISKEVWSEVRNWLGLKHSMTTIASALKWCKKEKKHSIHMKA-RKIA 6753
               ES  HLFF C  ++E+W  + +WLG +H        L W  +  K      A  K+A
Sbjct: 1329 CADESINHLFFNCSGTREIWGNILDWLGRRHDPREWDMELAWIIENTKGKGWKSALLKMA 1388

Query: 6754 LCCTIFYIWKMRNELVFEGSLPNVKICFEKIKTQVYR 6864
               T++ +W  RN + F  ++    I    I   VYR
Sbjct: 1389 TAETVYNVWHYRNSMCFGTAVDKQVIERNIIDNIVYR 1425



 Score =  100 bits (249), Expect = 6e-18
 Identities = 49/143 (34%), Positives = 75/143 (52%)
 Frame = +2

Query: 2474 HIQSSVIFKFESESDLEKILYGGSFHCQGSPVLLKRITNGVILNDNVSSLVPVWCKLPNL 2653
            H     + +F +  D E ++  G +  +  P++LK  T    L+ ++   +P+W KLP L
Sbjct: 150  HDDGYFLLRFMNREDRETVMMRGPYTIRNMPIILKEWTPDFNLSKDLEKTMPIWVKLPQL 209

Query: 2654 PFECWHPTALGKIASRLGKPICMDRETSDKSRTSFAKVLVEIDASTKPPSSISISLPNGL 2833
            P   W   +L KI S +G P+  D  T+ K R S+ ++LVE+D + K    I+IS   G 
Sbjct: 210  PLCLWGLKSLNKIGSAIGNPLITDECTAQKLRVSYVRILVEVDITQKLVEEITISDRTGG 269

Query: 2834 CFNQTVHYEQHPKFCSKCKSFGH 2902
               Q V YE  P+FC KC+  GH
Sbjct: 270  KIKQIVEYEWKPEFCEKCQKAGH 292


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  574 bits (1480), Expect = e-160
 Identities = 335/942 (35%), Positives = 508/942 (53%), Gaps = 25/942 (2%)
 Frame = +1

Query: 3562 SWNIRGLKDPNKQADISSWVRSHKLDVVCFLETKIESNVCVSSKFCNSMMHLRFPGWLFA 3741
            SWN+RG  +  ++ +   W +  K      LET+++ +    S   +      FPGW   
Sbjct: 6    SWNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSS------FPGWKSV 59

Query: 3742 HNFHTTNNGRILIIWNPCSVDLSVISCFPQSIHCNVKCLVSQVSFFVSFTYGFYSVVDRR 3921
             N+     GRI ++W+P +V+++V+S   Q+I C VK       F V+F Y       RR
Sbjct: 60   CNYEFAALGRIWVVWDP-AVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRR 118

Query: 3922 DMWTNL--YDFDNPLLD-PWLIMGDFNCVKSPNEKLNGVPLTNYCLSDFQDTCMSLGLND 4092
             +W+ L     +    D PW+I+GDFN    P +   G       + +F++  ++  ++D
Sbjct: 119  RLWSELELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISD 178

Query: 4093 VVSTGCFYTW----NNSKVWERLDRALVNSAW-----SNSGLFCQADIPPPGHHSDHSPV 4245
            +   G  YTW     N+ + +++DR LVN +W      + G FC  +       SDH P 
Sbjct: 179  LPFRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEF------SDHCPS 232

Query: 4246 IVSLFQNAEKLKKPFRFFNMWSLHPSFLDIVQSSWN-LPCWGTHQFIFCXXXXXXXXXXX 4422
             V++   +    KPF+  N    HP F++ ++ +W+ L   G+  F              
Sbjct: 233  CVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIR 292

Query: 4423 XXXXXXXXXXXXXXXXXVEALKQNQILLQFDPCNSSLLAQNVSLKNEA----VFLSKAEK 4590
                              + LK  Q  L   P  SS LA    L+ EA      L+ AE+
Sbjct: 293  TFNREHYSGLEKRVVQAAQNLKTCQNNLLAAP--SSYLA---GLEKEAHRSWAELALAEE 347

Query: 4591 LFLAQKAKCNFLILNDKNTKFFHSIIKRNSLKRQICSISLDNGVKTSSFEQMTDVFLSFY 4770
             FL QK++  +L   D NT FFH ++       +I  +    G +  + +++    + F+
Sbjct: 348  RFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFF 407

Query: 4771 KDLFGSEMH-ASHIDYDIVKSGPCISVDNGL--MLSAPVLNCEIKDALFDIGDEKAPGPD 4941
            K+LFGS  H  S      + S      D     +L A V   +IK   F +   K+PGPD
Sbjct: 408  KELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPD 467

Query: 4942 GYSAAFFKNAWNVVGDDLCNAVSEFFVNRKLLKQINHTSIALIPKTDHNPTVSDFRPIAC 5121
            GY++ FFK  W++VG  L  AV EFF + +LL Q N T++ ++PK  +   +++FRPI+C
Sbjct: 468  GYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISC 527

Query: 5122 CNVIYKVITKIISKRLERVLPDLIDPAQAAFVGGRNITDNIFLAQEIIRNYARKRISPRC 5301
            CN IYKVI+K++++RLE +LP  I P+Q+AFV GR +T+N+ LA E+++ + +  IS R 
Sbjct: 528  CNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRG 587

Query: 5302 TIKVDLRKAYDTVSWSFLREVLIAMNFPSICIEWIMECVTTASFSICINGSLQGLFQGKR 5481
             +KVDLRKA+D+V W F+ E L A N P   + WI +C+T+ SFSI ++GSL G F+G +
Sbjct: 588  VLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSK 647

Query: 5482 GLRQGDPMSPALFVICMEYLSRLLNSRTKCSNFNFHPRCDVLNISHLAFADDLMLFSRGD 5661
            GLRQGDP+SP+LFVI ME LSRLL ++    +  +HP+   + IS LAFADDLM+F  G 
Sbjct: 648  GLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGK 707

Query: 5662 LISVKILCDCLSDFKAVSGLNINNSKSCIFTAGIQGQELTDILDTLEYPAGSLPVRYLGV 5841
              S++ +   L  FK +SGL +N  KS ++TAG++  +  D L    +  G+ P RYLG+
Sbjct: 708  ASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPFRYLGL 766

Query: 5842 PLAAQKLNSVHYAPLFDKIASYINCWTANSLSYAGRLQLIQSVLQGVECFWLQAFPLPSS 6021
            PL  +KL    Y+ L DKIA+  N W   +LS+AGRLQLI SV+     FWL +F LP  
Sbjct: 767  PLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKC 826

Query: 6022 VIDRIYKLCRLFLWG-----KKTAPIAWADVCLPKDEGGLGLRDAHSWNKALLAKVLWNL 6186
             +  I ++C  FLWG     +    ++W + CLPK EGGLGLR+  +WNK L  +++W L
Sbjct: 827  CLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWML 886

Query: 6187 HSKADSLWVKWVHAFYIKNTNVWDWIPNKNTSPLIKRIFEIR 6312
             ++ DSLWV W HA  +++ N W+     + S + K I  +R
Sbjct: 887  FARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLR 928



 Score = 72.0 bits (175), Expect = 2e-09
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
 Frame = +1

Query: 6373 SNPFGFIPSLIYDVFRKKGEKSFWKAAIWKAFIPPKYSFCTWMAYKGRLATKNNLTFLQI 6552
            S+   F   L ++  R++     W AA+W     PKY+F  W+A+  RL  +   T    
Sbjct: 1028 SSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTHWST 1087

Query: 6553 D-PS-CMFCNHPTESCAHLFFECRISKEVWSEVRNWLGLKHSMTTIASALKWCKKEKKHS 6726
            + PS C  C   TE+  HLF  C +   +W +V    G           ++W     + S
Sbjct: 1088 NRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKDIIEW-MLSNQGS 1146

Query: 6727 IHMKARKIALCCTIFYIWKMRNELVFEGSLPNVKICFEKIKTQV 6858
                 +K+A+   IF+IWK RN  +      +    F++I   +
Sbjct: 1147 FSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSI 1190


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  557 bits (1435), Expect = e-155
 Identities = 324/918 (35%), Positives = 483/918 (52%), Gaps = 18/918 (1%)
 Frame = +1

Query: 3550 MKIASWNIRGLKDPNKQADISSWVRSHKLDVVCFLETKIESNVCVSSKFCNSMMHLRFPG 3729
            MK+  WNIRGL   N+Q  + SW+ S+ L V CFLET       V+ +  NS++    PG
Sbjct: 1    MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETH------VAQENANSVLASTLPG 54

Query: 3730 WLFAHNFHTTNNGRILIIWNPCSVDLSVISCFPQSIHCNVKCLVSQVSFFVSFTYGFYSV 3909
            W    N+  +  GRI I+W+P S+ + V     Q + C++K      SF V+F YG  S 
Sbjct: 55   WRMDSNYCCSELGRIWIVWDP-SISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSE 113

Query: 3910 VDRRDMWTNLYDFD--NPL-LDPWLIMGDFNCVKSPNE--KLNGVPLTNYCLSDFQDTCM 4074
            +DRR +W ++      +PL + PWL++GDFN + + +E   +N   L    + D Q    
Sbjct: 114  LDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLR 173

Query: 4075 SLGLNDVVSTGCFYTWNNSK----VWERLDRALVNSAWSNSGLFCQADIPPPGHHSDHSP 4242
               L+D+ S G F+TW+N +    +  +LDRAL N  W        A   PPG  SDH+P
Sbjct: 174  DSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGD-SDHAP 232

Query: 4243 VIVSLFQNAEKLKKPFRFFNMWSLHPSFLDIVQSSWNLPCW-GTHQFIFCXXXXXXXXXX 4419
             I+ +       KK F++F+  S HPS+L  + ++W      G+H F             
Sbjct: 233  CIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCC 292

Query: 4420 XXXXXXXXXXXXXXXXXXVEALKQNQILLQFDPCNSSLLAQNVSLKNEAVFLSKAEKLFL 4599
                              +  L+  Q+ L   P ++    ++V+ K + +F + A + F 
Sbjct: 293  RTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVARK-QWIFFAAALESFF 351

Query: 4600 AQKAKCNFLILNDKNTKFFHSIIKRNSLKRQICSISLDNGVKTSSFEQMTDVFLSFYKDL 4779
             QK++  +L   D NT+FFH  +  +     I  +  D+G +  + +Q+  + +++Y  L
Sbjct: 352  RQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHL 411

Query: 4780 FG-SEMHASHIDYDIVKSGPCISVDNGLMLSAPVLNCE--IKDALFDIGDEKAPGPDGYS 4950
             G    + +    + +K       D+ L      +  E  I   LF +   KAPGPDG+ 
Sbjct: 412  LGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFP 471

Query: 4951 AAFFKNAWNVVGDDLCNAVSEFFVNRKLLKQINHTSIALIPKTDHNPTVSDFRPIACCNV 5130
              FF  AW +V   +  A+ EFF++  L +  N T+I LIPK      ++ FRP+ACC  
Sbjct: 472  VEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTT 531

Query: 5131 IYKVITKIISKRLERVLPDLIDPAQAAFVGGRNITDNIFLAQEIIRNYARKRISPRCTIK 5310
            IYKVIT+IIS+RL+  +   +   Q  F+ GR + +N+ LA E++ N+     + R  ++
Sbjct: 532  IYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQ 591

Query: 5311 VDLRKAYDTVSWSFLREVLIAMNFPSICIEWIMECVTTASFSICINGSLQGLFQGKRGLR 5490
            VD+ KAYD V+W FL  +L A++ P + I WI  C+++AS+SI  NG L G FQGK+G+R
Sbjct: 592  VDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIR 651

Query: 5491 QGDPMSPALFVICMEYLSRLLNSRTKCSNFNFHPRCDVLNISHLAFADDLMLFSRGDLIS 5670
            QGDPMS  LFV+ M+ LS+ L+       FN HP C    I+HL+FADD+++FS G   S
Sbjct: 652  QGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASS 711

Query: 5671 VKILCDCLSDFKAVSGLNINNSKSCIFTAGIQGQELTDILDTLEYPAGSLPVRYLGVPLA 5850
            +  +   L DF+  SGL IN  K+ +   G        + D L    GSLPVRYLGVPL 
Sbjct: 712  IAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLM 771

Query: 5851 AQKLNSVHYAPLFDKIASYINCWTANSLSYAGRLQLIQSVLQGVECFWLQAFPLPSSVID 6030
            +QK+    Y PL D+I S    WTA  LS+AGRLQL++SV+     FW   F  P+  + 
Sbjct: 772  SQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQ 831

Query: 6031 RIYKLCRLFLW-----GKKTAPIAWADVCLPKDEGGLGLRDAHSWNKALLAKVLWNLHSK 6195
            ++ ++C  FLW       + A I+W  VC PK+ GGLGL+   SWN+ L  K++W L + 
Sbjct: 832  KLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWLLFTS 891

Query: 6196 ADSLWVKWVHAFYIKNTN 6249
            A SLWV WV    I   N
Sbjct: 892  AGSLWVSWVRLHLIGRRN 909