BLASTX nr result

ID: Scutellaria22_contig00037862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037862
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD18955.1| reverse transcriptase [Orobanche crenata]              122   2e-26
gb|ABD18977.1| reverse transcriptase [Orobanche owerinii]             122   2e-26
gb|ABD19010.1| reverse transcriptase [Orobanche cernua var. dese...   121   5e-26
gb|ABD18997.1| reverse transcriptase [Orobanche cernua var. cumana]   121   5e-26
gb|ABD18986.1| reverse transcriptase [Orobanche cernua var. cern...   121   5e-26

>gb|ABD18955.1| reverse transcriptase [Orobanche crenata]
          Length = 87

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/72 (79%), Positives = 61/72 (84%)
 Frame = +1

Query: 4   QPDGFVNSSKPNHVCLLNKSLYGLKQSPRQWNRKFDECMQSLKFIRSAYDHCLYFKRDNF 183
           QP GFV+   PNHVCLL KSLYGLKQSPRQWN+KFDECM SLKF RS YDHCLY+K D+ 
Sbjct: 16  QPVGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFDRSNYDHCLYYKIDSE 75

Query: 184 VPVFLLIYVDDM 219
            PVFLLIYVDDM
Sbjct: 76  NPVFLLIYVDDM 87


>gb|ABD18977.1| reverse transcriptase [Orobanche owerinii]
          Length = 87

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/72 (79%), Positives = 61/72 (84%)
 Frame = +1

Query: 4   QPDGFVNSSKPNHVCLLNKSLYGLKQSPRQWNRKFDECMQSLKFIRSAYDHCLYFKRDNF 183
           QP GFV+   PNHVCLL KSLYGLKQSPRQWN+KFDECM SLKF RS YDHCLY+K D+ 
Sbjct: 16  QPVGFVDRKHPNHVCLLKKSLYGLKQSPRQWNKKFDECMLSLKFERSNYDHCLYYKIDSE 75

Query: 184 VPVFLLIYVDDM 219
            PVFLLIYVDDM
Sbjct: 76  NPVFLLIYVDDM 87


>gb|ABD19010.1| reverse transcriptase [Orobanche cernua var. desertorum]
          Length = 87

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/72 (77%), Positives = 61/72 (84%)
 Frame = +1

Query: 4   QPDGFVNSSKPNHVCLLNKSLYGLKQSPRQWNRKFDECMQSLKFIRSAYDHCLYFKRDNF 183
           QP GFV+   PNHVCLL KSLYGLKQSPRQWN+KFDE M SLKF+RS YDHCLY+K D+ 
Sbjct: 16  QPIGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDEYMLSLKFVRSNYDHCLYYKTDSK 75

Query: 184 VPVFLLIYVDDM 219
            PVFLLIYVDDM
Sbjct: 76  NPVFLLIYVDDM 87


>gb|ABD18997.1| reverse transcriptase [Orobanche cernua var. cumana]
          Length = 87

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/72 (77%), Positives = 61/72 (84%)
 Frame = +1

Query: 4   QPDGFVNSSKPNHVCLLNKSLYGLKQSPRQWNRKFDECMQSLKFIRSAYDHCLYFKRDNF 183
           QP GFV+   PNHVCLL KSLYGLKQSPRQWN+KFDE M SLKF+RS YDHCLY+K D+ 
Sbjct: 16  QPIGFVDPKHPNHVCLLEKSLYGLKQSPRQWNKKFDEYMLSLKFVRSNYDHCLYYKTDSK 75

Query: 184 VPVFLLIYVDDM 219
            PVFLLIYVDDM
Sbjct: 76  NPVFLLIYVDDM 87


>gb|ABD18986.1| reverse transcriptase [Orobanche cernua var. cernua]
           gi|87083150|gb|ABD19027.1| reverse transcriptase
           [Orobanche cernua var. australiana]
          Length = 87

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/72 (77%), Positives = 61/72 (84%)
 Frame = +1

Query: 4   QPDGFVNSSKPNHVCLLNKSLYGLKQSPRQWNRKFDECMQSLKFIRSAYDHCLYFKRDNF 183
           QP GFV+   PNHVCLL KSLYGLKQSPRQWN+KFDE M SLKF+RS YDHCLY+K D+ 
Sbjct: 16  QPIGFVDPKHPNHVCLLKKSLYGLKQSPRQWNKKFDEYMLSLKFVRSNYDHCLYYKTDSK 75

Query: 184 VPVFLLIYVDDM 219
            PVFLLIYVDDM
Sbjct: 76  NPVFLLIYVDDM 87


Top