BLASTX nr result

ID: Scutellaria22_contig00036843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036843
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ...   138   4e-31
gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]           136   2e-30
ref|NP_196557.1| pentatricopeptide repeat-containing protein [Ar...   135   3e-30

>ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|222872247|gb|EEF09378.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/86 (79%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
 Frame = +2

Query: 8   EIDGCEIIFSRMAER-DDVSWNSMISGYIHSELLVKAMDLVWLMLHNGQKLDCFTFATVL 184
           E++ CE IFSRM+ER D+VSWNSMISGYIH++LL KAMDLVWLM+  GQ+LDCFTFATVL
Sbjct: 509 EMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVL 568

Query: 185 SACASVATLEHGMEVHACATRACLVS 262
           SACA+VATLE GMEVHACA RACL S
Sbjct: 569 SACATVATLERGMEVHACAIRACLES 594


>ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|222837227|gb|EEE75606.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/86 (80%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
 Frame = +2

Query: 8   EIDGCEIIFSRMAER-DDVSWNSMISGYIHSELLVKAMDLVWLMLHNGQKLDCFTFATVL 184
           E++ CE IFSRM+ER D+VSWNSMISGYIH+ELL KAMDLVWLM+  GQ+LDCFTFATVL
Sbjct: 356 EMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVL 415

Query: 185 SACASVATLEHGMEVHACATRACLVS 262
           SACA+VATLE GMEVHACA RACL S
Sbjct: 416 SACATVATLECGMEVHACAIRACLES 441


>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510273|gb|AES91415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/88 (77%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   CREIDGCEIIFSRMAER-DDVSWNSMISGYIHSELLVKAMDLVWLMLHNGQKLDCFTFAT 178
           C +++ CEIIFSRM+ER D+VSWNSMISGY+HS +L KAMDLVW M+  GQKLD FTFAT
Sbjct: 707 CEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFAT 766

Query: 179 VLSACASVATLEHGMEVHACATRACLVS 262
           VLSACASVATLE GMEVHACA RACL S
Sbjct: 767 VLSACASVATLERGMEVHACAVRACLES 794



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = +2

Query: 2   CREIDGCEIIFSRMAERDDVSWNSMISGYIHSELLVKAMDLVWLMLHNGQKLDCFTFATV 181
           C  ID    +F  M  +D VSWNSMISG  H+E   +A+     M  NG     F+  + 
Sbjct: 504 CTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIST 563

Query: 182 LSACASVATLEHGMEVH 232
           LS+C+S+  L  G ++H
Sbjct: 564 LSSCSSLGWLTLGRQIH 580


>gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/88 (76%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   CREIDGCEIIFSRMAER-DDVSWNSMISGYIHSELLVKAMDLVWLMLHNGQKLDCFTFAT 178
           C E+DGCE IFSRM+ER DDV+WNSMISGYIH+ELL KA+DLVW ML  GQ+LD F +AT
Sbjct: 285 CGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 344

Query: 179 VLSACASVATLEHGMEVHACATRACLVS 262
           VLSA ASVATLE GMEVHAC+ RACL S
Sbjct: 345 VLSAFASVATLERGMEVHACSVRACLES 372



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = +2

Query: 11  IDGCEIIFSRMAERDDVSWNSMISGYIHSE-LLVKAMDLVWLMLHNGQKLDCFTFATVLS 187
           ++ C  IFS M E D VSWNS+I     SE  L +A+      L  GQKL+  TF++VLS
Sbjct: 186 LNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLS 245

Query: 188 ACASVATLEHGMEVHACATR 247
           A +S++  E G ++H  A +
Sbjct: 246 AVSSLSFGELGKQIHGLALK 265


>ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g09950 gi|9758973|dbj|BAB09416.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332004087|gb|AED91470.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/88 (76%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   CREIDGCEIIFSRMAER-DDVSWNSMISGYIHSELLVKAMDLVWLMLHNGQKLDCFTFAT 178
           C E+DGCE IFSRMAER D+V+WNSMISGYIH+ELL KA+DLVW ML  GQ+LD F +AT
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624

Query: 179 VLSACASVATLEHGMEVHACATRACLVS 262
           VLSA ASVATLE GMEVHAC+ RACL S
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLES 652


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