BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036804
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida] gi|...    66   3e-09
ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thal...    59   4e-07
ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arab...    57   1e-06
emb|CAN72702.1| hypothetical protein VITISV_001471 [Vitis vinifera]    56   3e-06

>gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida]
           gi|117166029|dbj|BAF36331.1| hypothetical protein
           [Ipomoea trifida]
          Length = 1040

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
 Frame = +3

Query: 24  KRTAEPPIIDSSVKKNVSRVENCNSGTRSYVSFNNRIE--SNQGEGNVERTDSEVAN--- 188
           ++T E P ++SS     S  ++  S TR   S + + E  +N   G+ ++T++  +N   
Sbjct: 56  RKTPEVPNLNSS-----SGTQSLGSTTRRSSSEDKKCERSTNSDNGSQQKTENRESNNGC 110

Query: 189 -------EMGREWWFVGSGEVAGLSTCKGRILKPGDE 278
                  EM  EWWFVG+ EV+GLSTCKGR LKPGDE
Sbjct: 111 RSDADGCEMESEWWFVGTSEVSGLSTCKGRSLKPGDE 147


>ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
           gi|60390961|sp|Q9FNI6.1|SM3L2_ARATH RecName:
           Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2; Short=SMARCA3-like protein 2
           gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5
           protein [Arabidopsis thaliana]
           gi|110737306|dbj|BAF00599.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005687|gb|AED93070.1|
           DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
          Length = 1029

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/72 (44%), Positives = 39/72 (54%)
 Frame = +3

Query: 63  KKNVSRVENCNSGTRSYVSFNNRIESNQGEGNVERTDSEVANEMGREWWFVGSGEVAGLS 242
           K+  S ++ C  G    V  N+R+E      N    +S      G EWWFVG  E+AGLS
Sbjct: 67  KRVDSGLKGCTFGDSGSVGANHRVEEENESVNGGGEESV----SGNEWWFVGCSELAGLS 122

Query: 243 TCKGRILKPGDE 278
           TCKGR LK GDE
Sbjct: 123 TCKGRKLKSGDE 134


>ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
           lyrata] gi|297319921|gb|EFH50343.1| hypothetical protein
           ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata]
          Length = 1029

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
 Frame = +3

Query: 12  PSSRKRTAEPPIIDSSV--KKNVSRVENCNSGTRSYVSFNNRIESNQGEGNVERTDSEVA 185
           PS  K     PI   S   K+  +R++ C+ G  + V   + +E      N    +S   
Sbjct: 48  PSFGKPDVATPIPSGSNGGKRVENRIKGCSFGDSASVGVTHLVEEEDESVNGGGEESV-- 105

Query: 186 NEMGREWWFVGSGEVAGLSTCKGRILKPGDE 278
              G EWWFVG  E+ GLSTCKGR LK GDE
Sbjct: 106 --SGNEWWFVGCSELGGLSTCKGRKLKSGDE 134


>emb|CAN72702.1| hypothetical protein VITISV_001471 [Vitis vinifera]
          Length = 268

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
 Frame = +3

Query: 9   EPSSRKRTAEPPIIDSSVKKNVSRVENCNSGTRSYVSFNNR---------IESNQGE--- 152
           E   R  ++   I+ S   +N    + C+ G  + VS +NR         + SN+ +   
Sbjct: 59  ETFRRNSSSLSGIVVSDSYRNEDETKKCSLGNGTVVSDSNRNNNEAKKCSLGSNENDTPT 118

Query: 153 -----GNVERTDSEVANEMGREWWFVGSGEVAGLSTCKGRILKPGDE 278
                 N     S  +  +G EWWF+   E+AGLSTCKGR +K GDE
Sbjct: 119 PSNLVDNSLEASSRCSGSIGSEWWFLNCSELAGLSTCKGRRMKSGDE 165