BLASTX nr result

ID: Scutellaria22_contig00035451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035451
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]    98   6e-19
emb|CBI35592.3| unnamed protein product [Vitis vinifera]               89   5e-16
gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloy...    59   3e-07
gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xero...    58   7e-07

>ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
            mitochondrial [Vitis vinifera]
          Length = 876

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 20/125 (16%)
 Frame = -1

Query: 315  LNRAFEFMYTMFQDGCQPNDQVYSALLSGILTSNR----------GEIDV---------N 193
            L+RAF+ + TM ++GCQPN  +YSALLSG + SN           G++D          N
Sbjct: 643  LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 702

Query: 192  SC-SNLLFTEIRIHHAFQLLDRTKDCGGRPFDVYKFLITGLCRRGRISEADILIQQMVEH 16
            +C S+ +F  + + HA ++ D  K CG    D+Y FL+ GLC+ GRI EAD L Q MV+H
Sbjct: 703  NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 762

Query: 15   GLTPD 1
            GL PD
Sbjct: 763  GLFPD 767


>emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 20/125 (16%)
 Frame = -1

Query: 315 LNRAFEFMYTMFQDGCQPNDQVYSALLSGILTSNR----------GEIDV---------N 193
           L+RAF+ + TM ++GCQPN  +YSALLSG + SN           G++D          N
Sbjct: 600 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 659

Query: 192 SC-SNLLFTEIRIHHAFQLLDRTKDCGGRPFDVYKFLITGLCRRGRISEADILIQQMVEH 16
           +C S+ +F  + + HA ++ D  K CG    D+Y FL+ GLC+ GRI EAD L Q MV+H
Sbjct: 660 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 719

Query: 15  GLTPD 1
           GL PD
Sbjct: 720 GLFPD 724


>emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 10/115 (8%)
 Frame = -1

Query: 315 LNRAFEFMYTMFQDGCQPNDQVYSALLSGILTSNR----------GEIDVNSCSNLLFTE 166
           L+RAF+ + TM ++GCQPN  +YSALLSG + SN           G++D  S S+    E
Sbjct: 666 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS----E 721

Query: 165 IRIHHAFQLLDRTKDCGGRPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTPD 1
              ++   L +  K CG    D+Y FL+ GLC+ GRI EAD L Q MV+HGL PD
Sbjct: 722 ENDNNC--LSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 774


>gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
          Length = 376

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/104 (32%), Positives = 54/104 (51%)
 Frame = -1

Query: 315 LNRAFEFMYTMFQDGCQPNDQVYSALLSGILTSNRGEIDVNSCSNLLFTEIRIHHAFQLL 136
           L +A   +  M Q GC+PN  VY+AL++G++ +++ E  +      +F E+   H    +
Sbjct: 145 LEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIR-----VFREMGFPHCSPTI 199

Query: 135 DRTKDCGGRPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTP 4
                        Y  LI GLC+  R SEA  L+++M+E GLTP
Sbjct: 200 V-----------TYSILINGLCKSERFSEAYDLVKEMLEKGLTP 232


>gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 369

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/104 (31%), Positives = 54/104 (51%)
 Frame = -1

Query: 315 LNRAFEFMYTMFQDGCQPNDQVYSALLSGILTSNRGEIDVNSCSNLLFTEIRIHHAFQLL 136
           L +A   +  M + GC+PN  VY+AL++G++ +++ E  +      +F E+ I H    +
Sbjct: 145 LEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIR-----VFREMGITHCSPTI 199

Query: 135 DRTKDCGGRPFDVYKFLITGLCRRGRISEADILIQQMVEHGLTP 4
                        Y  LI GLC+  R  EA  L+++M+E GLTP
Sbjct: 200 V-----------TYNILINGLCKSERFGEAYDLVKEMLEKGLTP 232


Top