BLASTX nr result

ID: Scutellaria22_contig00035255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035255
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   162   2e-38
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   162   3e-38
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   155   2e-36
ref|NP_174061.1| DNA repair metallo-beta-lactamase family protei...   149   3e-34
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...   145   4e-33

>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  162 bits (411), Expect = 2e-38
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = +2

Query: 2   GMISVDKWSSGSQAYFLTHLHADHTVGLSSSWRCGPLFCSRLTAKLFVCKFPDFDLSLLR 181
           G+ISVD+WS GSQ YFLTHLH+DHT GLSS W  GPLFCSRLTAK F  KFP F+LSLLR
Sbjct: 4   GLISVDRWSEGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFFPLKFPSFNLSLLR 63

Query: 182 IVDIGSWHTLSIIDPSSGSTAIVKVKAIDAQHCPGSVMYLFRGE 313
           +++IG WH++S++ PSSGS  ++KV AIDA HCPG+VM LFRG+
Sbjct: 64  VLEIGLWHSISLVSPSSGSRKVIKVVAIDAHHCPGAVMLLFRGD 107


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/104 (72%), Positives = 88/104 (84%)
 Frame = +2

Query: 2   GMISVDKWSSGSQAYFLTHLHADHTVGLSSSWRCGPLFCSRLTAKLFVCKFPDFDLSLLR 181
           G+ISVD+WS  SQ YFLTHLH+DHT  LSSSW  GPLFCSRLTAKLF  KFP+F+LSLLR
Sbjct: 4   GLISVDRWSDHSQVYFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLFPFKFPNFNLSLLR 63

Query: 182 IVDIGSWHTLSIIDPSSGSTAIVKVKAIDAQHCPGSVMYLFRGE 313
           I++IGSWH++S++ PSSGS   V V AIDA HCPG+VMYLFRG+
Sbjct: 64  ILEIGSWHSVSLVSPSSGSETTVDVMAIDAHHCPGAVMYLFRGD 107


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  155 bits (393), Expect = 2e-36
 Identities = 67/104 (64%), Positives = 86/104 (82%)
 Frame = +2

Query: 2   GMISVDKWSSGSQAYFLTHLHADHTVGLSSSWRCGPLFCSRLTAKLFVCKFPDFDLSLLR 181
           G++SVD+W  GSQ YFLTHLH+DHT GL+S+W  GPLFCSRLTA LF  +FP+F+LSLL 
Sbjct: 4   GLVSVDQWKEGSQVYFLTHLHSDHTKGLTSAWARGPLFCSRLTANLFPARFPEFNLSLLC 63

Query: 182 IVDIGSWHTLSIIDPSSGSTAIVKVKAIDAQHCPGSVMYLFRGE 313
           ++DIG WH+LS++ PSSGS  +++V  IDA HCPG+VM LFRG+
Sbjct: 64  VLDIGVWHSLSVVSPSSGSQTVLQVMPIDAHHCPGAVMLLFRGD 107


>ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
           thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20
           [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis
           thaliana] gi|332192705|gb|AEE30826.1| DNA repair
           metallo-beta-lactamase family protein [Arabidopsis
           thaliana]
          Length = 422

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/104 (64%), Positives = 83/104 (79%)
 Frame = +2

Query: 2   GMISVDKWSSGSQAYFLTHLHADHTVGLSSSWRCGPLFCSRLTAKLFVCKFPDFDLSLLR 181
           G+ISVD+W +GSQAYFLTH+H+DHT GLS  W  GPL+CSR TA LF  +FP FDLSLLR
Sbjct: 4   GLISVDRWRNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLSLLR 63

Query: 182 IVDIGSWHTLSIIDPSSGSTAIVKVKAIDAQHCPGSVMYLFRGE 313
           +V + SW +LS+  PSSGST  + + AIDA HCPGS+M+LFRG+
Sbjct: 64  VVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGD 107


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/104 (63%), Positives = 81/104 (77%)
 Frame = +2

Query: 2   GMISVDKWSSGSQAYFLTHLHADHTVGLSSSWRCGPLFCSRLTAKLFVCKFPDFDLSLLR 181
           G+ISVD+W  GSQAYFLTH+ +DHT GLS  W  GPL+CSR+TA LF  +FP FDLSLLR
Sbjct: 4   GLISVDRWRKGSQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLFPSRFPGFDLSLLR 63

Query: 182 IVDIGSWHTLSIIDPSSGSTAIVKVKAIDAQHCPGSVMYLFRGE 313
           +V + SW +LS+  PSSGST  +   AIDA HCPGS+M+LFRG+
Sbjct: 64  VVPLYSWTSLSLRSPSSGSTVRLHFMAIDAHHCPGSMMFLFRGD 107


Top