BLASTX nr result

ID: Scutellaria22_contig00035245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035245
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...   254   7e-66
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ...   254   7e-66
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia...   254   7e-66
ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis tha...   254   7e-66
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...   254   7e-66

>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
            [Arabidopsis thaliana]
          Length = 1894

 Score =  254 bits (648), Expect = 7e-66
 Identities = 125/147 (85%), Positives = 137/147 (93%)
 Frame = +2

Query: 2    RKGILPRLLEEILSTRIMVKQAMKKLAPSQLVLHRILNARQLALKLIANVTYGYTAAGFS 181
            R+GILPRLLEEILSTRIMVK+AMKKL PS+ VLHRI NARQLALKLIANVTYGYTAAGFS
Sbjct: 1427 RRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFS 1486

Query: 182  GRMPCAELADSIVQCGRRTLEAAISFVNSNDKWKARVIYGDTDSLFVLLKGRSLQEAFAV 361
            GRMPCAELADSIVQCGR TLE AISFVN+ND W ARV+YGDTDS+FVLLKGR+++EAF V
Sbjct: 1487 GRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVV 1546

Query: 362  GREIASEITKMNPSPVTLKMEKVYYPC 442
            G+EIAS IT+MNP PVTLKMEKVY+PC
Sbjct: 1547 GQEIASAITEMNPHPVTLKMEKVYHPC 1573


>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
          Length = 1871

 Score =  254 bits (648), Expect = 7e-66
 Identities = 125/147 (85%), Positives = 137/147 (93%)
 Frame = +2

Query: 2    RKGILPRLLEEILSTRIMVKQAMKKLAPSQLVLHRILNARQLALKLIANVTYGYTAAGFS 181
            R+GILPRLLEEILSTRIMVK+AMKKL PS+ VLHRI NARQLALKLIANVTYGYTAAGFS
Sbjct: 1427 RRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFS 1486

Query: 182  GRMPCAELADSIVQCGRRTLEAAISFVNSNDKWKARVIYGDTDSLFVLLKGRSLQEAFAV 361
            GRMPCAELADSIVQCGR TLE AISFVN+ND W ARV+YGDTDS+FVLLKGR+++EAF V
Sbjct: 1487 GRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVV 1546

Query: 362  GREIASEITKMNPSPVTLKMEKVYYPC 442
            G+EIAS IT+MNP PVTLKMEKVY+PC
Sbjct: 1547 GQEIASAITEMNPHPVTLKMEKVYHPC 1573


>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
            gi|34330129|dbj|BAC82450.1| catalytic subunit of
            polymerase zeta [Arabidopsis thaliana]
            gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
            [Arabidopsis thaliana]
          Length = 1890

 Score =  254 bits (648), Expect = 7e-66
 Identities = 125/147 (85%), Positives = 137/147 (93%)
 Frame = +2

Query: 2    RKGILPRLLEEILSTRIMVKQAMKKLAPSQLVLHRILNARQLALKLIANVTYGYTAAGFS 181
            R+GILPRLLEEILSTRIMVK+AMKKL PS+ VLHRI NARQLALKLIANVTYGYTAAGFS
Sbjct: 1423 RRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFS 1482

Query: 182  GRMPCAELADSIVQCGRRTLEAAISFVNSNDKWKARVIYGDTDSLFVLLKGRSLQEAFAV 361
            GRMPCAELADSIVQCGR TLE AISFVN+ND W ARV+YGDTDS+FVLLKGR+++EAF V
Sbjct: 1483 GRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVV 1542

Query: 362  GREIASEITKMNPSPVTLKMEKVYYPC 442
            G+EIAS IT+MNP PVTLKMEKVY+PC
Sbjct: 1543 GQEIASAITEMNPHPVTLKMEKVYHPC 1569


>ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
            gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit
            [Arabidopsis thaliana]
          Length = 1916

 Score =  254 bits (648), Expect = 7e-66
 Identities = 125/147 (85%), Positives = 137/147 (93%)
 Frame = +2

Query: 2    RKGILPRLLEEILSTRIMVKQAMKKLAPSQLVLHRILNARQLALKLIANVTYGYTAAGFS 181
            R+GILPRLLEEILSTRIMVK+AMKKL PS+ VLHRI NARQLALKLIANVTYGYTAAGFS
Sbjct: 1449 RRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFS 1508

Query: 182  GRMPCAELADSIVQCGRRTLEAAISFVNSNDKWKARVIYGDTDSLFVLLKGRSLQEAFAV 361
            GRMPCAELADSIVQCGR TLE AISFVN+ND W ARV+YGDTDS+FVLLKGR+++EAF V
Sbjct: 1509 GRMPCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVV 1568

Query: 362  GREIASEITKMNPSPVTLKMEKVYYPC 442
            G+EIAS IT+MNP PVTLKMEKVY+PC
Sbjct: 1569 GQEIASAITEMNPHPVTLKMEKVYHPC 1595


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
            lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
            ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score =  254 bits (648), Expect = 7e-66
 Identities = 125/147 (85%), Positives = 137/147 (93%)
 Frame = +2

Query: 2    RKGILPRLLEEILSTRIMVKQAMKKLAPSQLVLHRILNARQLALKLIANVTYGYTAAGFS 181
            R+GILPRLLEEILSTRIMVK+AMKKL PS+ VLHRI NARQLALKLIANVTYGYTAAGFS
Sbjct: 1432 RRGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFS 1491

Query: 182  GRMPCAELADSIVQCGRRTLEAAISFVNSNDKWKARVIYGDTDSLFVLLKGRSLQEAFAV 361
            GRMPCAELADSIVQCGR TLE AISFVN+ND W ARV+YGDTDS+FVLLKGR+++EAF V
Sbjct: 1492 GRMPCAELADSIVQCGRSTLEKAISFVNANDSWNARVVYGDTDSMFVLLKGRTVKEAFVV 1551

Query: 362  GREIASEITKMNPSPVTLKMEKVYYPC 442
            G+EIAS IT+MNP PVTLKMEKVY+PC
Sbjct: 1552 GQEIASAITEMNPHPVTLKMEKVYHPC 1578


Top