BLASTX nr result

ID: Scutellaria22_contig00035240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035240
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452948.1| hypothetical protein SORBIDRAFT_04g035400 [S...    59   5e-07
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...    59   5e-07
ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...    59   5e-07
ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinu...    58   7e-07
ref|XP_002336789.1| glutamate-gated kainate-type ion channel rec...    57   1e-06

>ref|XP_002452948.1| hypothetical protein SORBIDRAFT_04g035400 [Sorghum bicolor]
           gi|241932779|gb|EES05924.1| hypothetical protein
           SORBIDRAFT_04g035400 [Sorghum bicolor]
          Length = 1004

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/75 (37%), Positives = 42/75 (56%)
 Frame = +1

Query: 1   IKTYRSVEDCRKDLSSGSISAYCDVLPHIKLILSQSCGKYKMVDPIYRTDXXXXXXXXXX 180
           +K+Y + E     LSSG ++A  D +P++KL LSQ C  Y MV P+Y+TD          
Sbjct: 731 MKSYSTAEKYADALSSGQVAAVFDEIPYLKLFLSQYCDGYTMVGPVYKTDGFGFVFPMGS 790

Query: 181 XXVSDISRAIIKVIE 225
               D+SRA++ + E
Sbjct: 791 PLTPDVSRAVLTLAE 805


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 931

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
 Frame = +1

Query: 4   KTYRSVEDCR----KDLSSGSISAYCDVLPHIKLILSQSCGKYKMVDPIYRTDXXXXXXX 171
           K Y S E+C     K   +G I+A  D +P+IKL L+Q C KY MV+P ++T        
Sbjct: 696 KVYNSTEECNELFVKGTRNGGIAAAFDEVPYIKLFLAQYCSKYTMVEPTFKTGGFGFVFP 755

Query: 172 XXXXXVSDISRAIIKVIE 225
                V D+SRAI+ VI+
Sbjct: 756 KRSPLVPDVSRAILDVIQ 773


>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 961

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
 Frame = +1

Query: 1   IKTYRSVEDCR----KDLSSGSISAYCDVLPHIKLILSQSCGKYKMVDPIYRTDXXXXXX 168
           +K Y+S E+C     K   +G I+A  + +P+IKL L+Q C KY MV+P ++T       
Sbjct: 719 LKVYKSTEECNELFVKGTRNGGITAAFEEVPYIKLFLAQYCSKYTMVEPTFKTGGFGFVF 778

Query: 169 XXXXXXVSDISRAIIKVIE 225
                 V D+SRAI+ VI+
Sbjct: 779 PKRSLLVPDVSRAILDVIQ 797


>ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545316|gb|EEF46821.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 971

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = +1

Query: 10  YRSVEDCRKDLSSGS----ISAYCDVLPHIKLILSQSCGKYKMVDPIYRTDXXXXXXXXX 177
           Y SVE C + LS GS    I+A  D LP++K+ L++ C KY MV PI +TD         
Sbjct: 726 YDSVEQCHELLSKGSRNGGIAAAFDELPYMKVFLAKYCSKYTMVQPITKTDGFGFVFPRG 785

Query: 178 XXXVSDISRAIIKVIE 225
              V DISRAI+ V E
Sbjct: 786 SPLVPDISRAILNVTE 801


>ref|XP_002336789.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222836912|gb|EEE75305.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 452

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
 Frame = +1

Query: 1   IKTYRSVEDCRKDLSSGS----ISAYCDVLPHIKLILSQSCGKYKMVDPIYRTDXXXXXX 168
           +K Y S E+C +  S GS    I+A  D L +IKLILS+ C KY M+DP ++T       
Sbjct: 203 LKVYGSPEECHRLFSKGSGNGGIAAAFDELAYIKLILSRYCSKYTMIDPKFKTGGLGFVF 262

Query: 169 XXXXXXVSDISRAIIKVIE 225
                 + DISRAI+ V E
Sbjct: 263 PKGSPLMPDISRAILNVTE 281


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